Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
COL11A1	0	genome.wustl.edu	37	1	103488461	103488461	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	103488461	103488461	T	C	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.1118	p.E373G	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				52	0	0	23	9	28.125
CELSR2	0	genome.wustl.edu	37	1	109813433	109813433	+	RNA	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	109813433	109813433	T	C	SNP	CELSR2	ENST00000489018	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CELSR2	HGNC	ENSG00000143126				27	0	0	20	9	31.0345
KCNC4	0	genome.wustl.edu	37	1	110766118	110766118	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	110766118	110766118	G	A	SNP	KCNC4	ENST00000369787	human	ensembl	74_37	+1	known	missense	c.1211	p.R404H	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_K_chnl_volt-dep_Kv3_ID,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.4,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC4	HGNC	ENSG00000116396				179	0	0	114	35	23.4899
TTLL10	0	genome.wustl.edu	37	1	1115547	1115547	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	1115547	1115547	C	T	SNP	TTLL10	ENST00000379289	human	ensembl	74_37	+1	known	silent	c.333	p.P111	0.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL10	HGNC	ENSG00000162571				27	0	0	13	11	45.8333
CHI3L2	0	genome.wustl.edu	37	1	111773369	111773369	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	111773369	111773369	G	A	SNP	CHI3L2	ENST00000369748	human	ensembl	74_37	+1	known	missense	c.76	p.A26T	0.887	NULL	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	CHI3L2	HGNC	ENSG00000064886				46	0	0	25	12	32.4324
MTOR	0	genome.wustl.edu	37	1	11190747	11190747	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	11190747	11190747	G	A	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.5452	p.R1818C	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793				26	0	0	19	3	13.6364
MTOR	0	genome.wustl.edu	37	1	11204730	11204730	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	11204730	11204730	C	T	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.4847	p.R1616H	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793				82	0	0	54	15	21.7391
MTOR	0	genome.wustl.edu	37	1	11313928	11313928	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	11313928	11313928	C	T	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.808	p.E270K	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793				154	0	0	113	28	19.8582
UBIAD1	0	genome.wustl.edu	37	1	11345851	11345851	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	11345851	11345851	C	A	SNP	UBIAD1	ENST00000376810	human	ensembl	74_37	+1	known	missense	c.680	p.A227D	1.000	pfam_UbiA_prenyltransferase	pfam_UbiA_prenyltransferase	-	no_errors	UBIAD1	HGNC	ENSG00000120942				160	0	0	74	42	36.2069
DENND2C	0	genome.wustl.edu	37	1	115130365	115130365	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	115130365	115130365	G	A	SNP	DENND2C	ENST00000393274	human	ensembl	74_37	-1	known	silent	c.2640	p.D880	1.000	pfam_dDENN_dom,smart_dDENN_dom,pfscan_dDENN_dom	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2C	HGNC	ENSG00000175984				60	0	0	40	13	24.5283
CSDE1	0	genome.wustl.edu	37	1	115272955	115272955	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	115272955	115272955	C	T	SNP	CSDE1	ENST00000369530	human	ensembl	74_37	-1	known	missense	c.1325	p.R442H	1.000	NULL	pfam_CSP_DNA-bd,superfamily_NA-bd_OB-fold,smart_Cold_shock_prot	-	no_errors	CSDE1	HGNC	ENSG00000009307				86	0	0	52	14	21.2121
MTHFR	0	genome.wustl.edu	37	1	11854880	11854880	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	11854880	11854880	G	A	SNP	MTHFR	ENST00000376583	human	ensembl	74_37	-1	known	nonsense	c.1195	p.R399*	1.000	NULL	pfam_Mehydrof_redctse,tigrfam_Fadh2_euk	-	no_errors	MTHFR	HGNC	ENSG00000177000				122	0	0	70	49	41.1765
MIIP	0	genome.wustl.edu	37	1	12091811	12091811	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	12091811	12091811	G	A	SNP	MIIP	ENST00000436478	human	ensembl	74_37	+1	known	missense	c.1016	p.R339Q	0.000	NULL	NULL	-	no_errors	MIIP	HGNC	ENSG00000116691				217	0	0	120	44	26.8293
ENSG00000242569	0	genome.wustl.edu	37	1	143362008	143362008	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	143362008	143362008	G	A	SNP	ENSG00000242569	ENST00000411775	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-435B5.3	Clone_based_vega_gene	ENSG00000242569				136	0	0	57	26	31.3253
SEC22B	0	genome.wustl.edu	37	1	145109530	145109530	+	RNA	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	145109530	145109530	T	C	SNP	SEC22B	ENST00000453618	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SEC22B	HGNC	ENSG00000223380				255	0	0	176	15	7.8534
ANKRD35	0	genome.wustl.edu	37	1	145560110	145560110	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	145560110	145560110	C	T	SNP	ANKRD35	ENST00000355594	human	ensembl	74_37	+1	known	missense	c.596	p.A199V	0.491	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD35	HGNC	ENSG00000198483				104	0	0	68	21	23.5955
POLR3C	0	genome.wustl.edu	37	1	145608468	145608468	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	145608468	145608468	G	A	SNP	POLR3C	ENST00000334163	human	ensembl	74_37	-1	known	silent	c.339	p.N113	0.996	NULL	pfam_RNA_pol_III_Rpc82_C,pfam_RNA_pol_III_RPC82-rel_HTH	-	no_errors	POLR3C	HGNC	ENSG00000186141				114	0	0	72	26	26.5306
GJA5	0	genome.wustl.edu	37	1	147230449	147230449	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	147230449	147230449	G	A	SNP	GJA5	ENST00000271348	human	ensembl	74_37	-1	known	nonsense	c.898	p.Q300*	0.678	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin40	-	no_errors	GJA5	HGNC	ENSG00000143140				150	0	0	93	25	21.1864
SV2A	0	genome.wustl.edu	37	1	149882203	149882203	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	149882203	149882203	G	A	SNP	SV2A	ENST00000369146	human	ensembl	74_37	-1	known	silent	c.1008	p.F336	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2A	HGNC	ENSG00000159164				37	0	0	20	12	37.5
SF3B4	0	genome.wustl.edu	37	1	149898716	149898716	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	149898716	149898716	C	T	SNP	SF3B4	ENST00000271628	human	ensembl	74_37	-1	known	silent	c.258	p.V86	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SF3B4	HGNC	ENSG00000143368				93	0	0	61	24	28.2353
MTMR11	0	genome.wustl.edu	37	1	149903123	149903123	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	149903123	149903123	C	T	SNP	MTMR11	ENST00000490310	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.058	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				74	0	0	30	16	34.7826
RPRD2	0	genome.wustl.edu	37	1	150445109	150445109	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	150445109	150445109	C	T	SNP	RPRD2	ENST00000369068	human	ensembl	74_37	+1	known	nonsense	c.3685	p.R1229*	1.000	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,superfamily_Ricin_B_lectin,smart_CID_dom	-	no_errors	RPRD2	HGNC	ENSG00000163125				147	0	0	98	7	6.66667
HRNR	0	genome.wustl.edu	37	1	152191461	152191461	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	152191461	152191461	G	A	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	nonsense	c.2644	p.R882*	0.001	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915				202	0	0	148	37	20
FLG	0	genome.wustl.edu	37	1	152286867	152286867	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	152286867	152286867	T	C	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	silent	c.495	p.S165	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				80	0	0	40	9	18.3673
LCE1E	0	genome.wustl.edu	37	1	152759915	152759915	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	152759915	152759915	G	T	SNP	LCE1E	ENST00000368770	human	ensembl	74_37	+1	known	missense	c.140	p.S47I	0.909	NULL	NULL	-	no_errors	LCE1E	HGNC	ENSG00000186226				177	0	0	135	29	17.6829
ILF2	0	genome.wustl.edu	37	1	153635620	153635620	+	RNA	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	153635620	153635620	G	T	SNP	ILF2	ENST00000480213	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ILF2	HGNC	ENSG00000143621				159	0	0	106	31	22.6277
C1orf43	0	genome.wustl.edu	37	1	154185102	154185102	+	Splice_Site	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	154185102	154185102	T	G	SNP	C1orf43	ENST00000368521	human	ensembl	74_37	-1	known	splice_site	c.341-2	e5-2	0.995	-	-	-	no_errors	C1orf43	HGNC	ENSG00000143612				63	0	0	40	8	16.6667
ATP8B2	0	genome.wustl.edu	37	1	154316910	154316910	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	154316910	154316910	C	T	SNP	ATP8B2	ENST00000368489	human	ensembl	74_37	+1	known	missense	c.2174	p.T725M	0.971	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B2	HGNC	ENSG00000143515				128	0	0	93	31	25
DCST2	0	genome.wustl.edu	37	1	154998785	154998785	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	154998785	154998785	C	T	SNP	DCST2	ENST00000368424	human	ensembl	74_37	-1	known	missense	c.1604	p.R535Q	0.997	pfam_DC_STAMP-like	pfam_DC_STAMP-like	-	no_errors	DCST2	HGNC	ENSG00000163354				117	0	0	74	23	23.7113
RUSC1	0	genome.wustl.edu	37	1	155291869	155291869	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	155291869	155291869	G	C	SNP	RUSC1	ENST00000368352	human	ensembl	74_37	+1	known	missense	c.305	p.C102S	1.000	NULL	pfam_Run,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC1	HGNC	ENSG00000160753				85	0	0	46	12	20.6897
GON4L	0	genome.wustl.edu	37	1	155735826	155735826	+	Silent	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	155735826	155735826	A	C	SNP	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	silent	c.3438	p.T1146	0.767	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580				191	0	0	112	34	23.2877
IQGAP3	0	genome.wustl.edu	37	1	156496285	156496285	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	156496285	156496285	C	T	SNP	IQGAP3	ENST00000361170	human	ensembl	74_37	-1	known	missense	c.4889	p.R1630Q	0.998	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_RasGAP	-	no_errors	IQGAP3	HGNC	ENSG00000183856				44	0	0	13	4	23.5294
RRNAD1	0	genome.wustl.edu	37	1	156704174	156704174	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	156704174	156704174	G	A	SNP	RRNAD1	ENST00000368216	human	ensembl	74_37	+1	known	missense	c.1010	p.R337Q	0.995	NULL	NULL	-	no_errors	RRNAD1	HGNC	ENSG00000143303				55	0	0	23	10	30.303
SPTA1	0	genome.wustl.edu	37	1	158581121	158581121	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	158581121	158581121	G	T	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.7193	p.P2398Q	0.873	pfam_EF-hand_Ca_insen	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				89	0	0	43	14	24.5614
PIGM	0	genome.wustl.edu	37	1	160000853	160000853	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	160000853	160000853	G	T	SNP	PIGM	ENST00000368090	human	ensembl	74_37	-1	known	missense	c.677	p.A226D	0.147	pfam_Mannosyltransferase_DXD	pfam_Mannosyltransferase_DXD	-	no_errors	PIGM	HGNC	ENSG00000143315				189	0	0	122	36	22.7848
NCSTN	0	genome.wustl.edu	37	1	160326878	160326878	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	160326878	160326878	G	A	SNP	NCSTN	ENST00000294785	human	ensembl	74_37	+1	known	silent	c.1842	p.T614	0.004	NULL	pfam_Nicastrin	-	no_errors	NCSTN	HGNC	ENSG00000162736				139	0	0	71	26	26.8041
TMEM82	0	genome.wustl.edu	37	1	16073510	16073510	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	16073510	16073510	C	T	SNP	TMEM82	ENST00000375782	human	ensembl	74_37	+1	known	silent	c.906	p.L302	0.018	NULL	NULL	-	no_errors	TMEM82	HGNC	ENSG00000162460				89	0	0	57	19	25
ITLN2	0	genome.wustl.edu	37	1	160914969	160914969	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	160914969	160914969	C	A	SNP	ITLN2	ENST00000368029	human	ensembl	74_37	-1	known	silent	c.939	p.R313	0.983	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom	-	no_errors	ITLN2	HGNC	ENSG00000158764				60	0	0	22	8	26.6667
PVRL4	0	genome.wustl.edu	37	1	161046146	161046146	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	161046146	161046146	G	A	SNP	PVRL4	ENST00000368012	human	ensembl	74_37	-1	known	missense	c.850	p.R284W	0.998	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PVRL4	HGNC	ENSG00000143217				54	0	0	43	14	24.5614
C1orf111	0	genome.wustl.edu	37	1	162344317	162344317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	162344317	162344317	C	T	SNP	C1orf111	ENST00000367935	human	ensembl	74_37	-1	known	missense	c.307	p.V103M	0.479	NULL	NULL	-	no_errors	C1orf111	HGNC	ENSG00000171722				302	0	0	179	44	19.7309
HSPB7	0	genome.wustl.edu	37	1	16342093	16342093	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	16342093	16342093	C	T	SNP	HSPB7	ENST00000487046	human	ensembl	74_37	-1	known	silent	c.510	p.R170	1.000	superfamily_HSP20-like_chaperone	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB7	HGNC	ENSG00000173641				81	0	0	38	18	32.1429
CROCCP2	0	genome.wustl.edu	37	1	16945763	16945763	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	16945763	16945763	G	A	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908				80	0	0	49	6	10.9091
ATP13A2	0	genome.wustl.edu	37	1	17332225	17332225	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	17332225	17332225	G	A	SNP	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	missense	c.59	p.T20M	0.996	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A2	HGNC	ENSG00000159363				32	0	0	26	11	29.7297
PADI2	0	genome.wustl.edu	37	1	17411114	17411114	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	17411114	17411114	G	A	SNP	PADI2	ENST00000375486	human	ensembl	74_37	-1	known	silent	c.918	p.P306	0.000	pfam_PAD_C,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI2	HGNC	ENSG00000117115				15	0	0	5	7	58.3333
ASTN1	0	genome.wustl.edu	37	1	176926901	176926901	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	176926901	176926901	C	T	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	silent	c.1824	p.P608	0.111	NULL	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092				62	0	0	27	8	22.8571
RALGPS2	0	genome.wustl.edu	37	1	178777241	178777241	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	178777241	178777241	C	T	SNP	RALGPS2	ENST00000367635	human	ensembl	74_37	+1	known	missense	c.275	p.A92V	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_RasGRF_CDC25	-	no_errors	RALGPS2	HGNC	ENSG00000116191				49	0	0	36	9	20
CEP350	0	genome.wustl.edu	37	1	179983022	179983022	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	179983022	179983022	C	T	SNP	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	silent	c.1434	p.D478	0.971	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837				105	0	0	46	16	25.8065
LHX4	0	genome.wustl.edu	37	1	180235529	180235529	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	180235529	180235529	G	A	SNP	LHX4	ENST00000263726	human	ensembl	74_37	+1	known	missense	c.251	p.R84H	1.000	pfam_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX4	HGNC	ENSG00000121454				99	0	0	67	23	25.5556
GABRD	0	genome.wustl.edu	37	1	1961191	1961191	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	1961191	1961191	C	T	SNP	GABRD	ENST00000378585	human	ensembl	74_37	+1	known	missense	c.1049	p.P350L	0.839	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAAd_rcpt	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAd_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRD	HGNC	ENSG00000187730				70	0	0	44	15	25.4237
CFHR1	0	genome.wustl.edu	37	1	196801077	196801077	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	196801077	196801077	G	A	SNP	CFHR1	ENST00000320493	human	ensembl	74_37	+1	known	missense	c.941	p.R314Q	0.005	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR1	HGNC	ENSG00000244414				59	0	0	26	11	29.7297
CACNA1S	0	genome.wustl.edu	37	1	201043736	201043736	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	201043736	201043736	T	C	SNP	CACNA1S	ENST00000362061	human	ensembl	74_37	-1	known	missense	c.1961	p.N654S	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_VDCC_L_a1ssu	-	no_errors	CACNA1S	HGNC	ENSG00000081248				36	0	0	19	9	32.1429
ADIPOR1	0	genome.wustl.edu	37	1	202920166	202920166	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	202920166	202920166	C	A	SNP	ADIPOR1	ENST00000340990	human	ensembl	74_37	-1	known	missense	c.33	p.Q11H	1.000	NULL	pfam_HlyIII-related	-	no_errors	ADIPOR1	HGNC	ENSG00000159346				129	0	0	111	7	5.9322
PPFIA4	0	genome.wustl.edu	37	1	203008205	203008205	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	203008205	203008205	C	T	SNP	PPFIA4	ENST00000367240	human	ensembl	74_37	+1	novel	silent	c.69	p.D23	0.994	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_Prefoldin,smart_SAM,pfscan_SAM	-	no_errors	PPFIA4	HGNC	ENSG00000143847				25	0	0	14	4	22.2222
CNTN2	0	genome.wustl.edu	37	1	205031679	205031679	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	205031679	205031679	G	A	SNP	CNTN2	ENST00000331830	human	ensembl	74_37	+1	known	missense	c.1222	p.A408T	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN2	HGNC	ENSG00000184144				71	0	0	44	11	20
KLHDC8A	0	genome.wustl.edu	37	1	205308421	205308421	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	205308421	205308421	G	T	SNP	KLHDC8A	ENST00000367155	human	ensembl	74_37	-1	known	missense	c.658	p.L220M	0.001	smart_Kelch_1	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC8A	HGNC	ENSG00000162873				68	0	0	52	10	16.129
MAPKAPK2	0	genome.wustl.edu	37	1	206905315	206905315	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	206905315	206905315	C	T	SNP	MAPKAPK2	ENST00000479009	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	MAPKAPK2	HGNC	ENSG00000162889				187	0	0	116	40	25.641
C4BPA	0	genome.wustl.edu	37	1	207287497	207287497	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	207287497	207287497	G	A	SNP	C4BPA	ENST00000367070	human	ensembl	74_37	+1	known	silent	c.195	p.T65	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	C4BPA	HGNC	ENSG00000123838				141	0	0	71	38	34.8624
CR2	0	genome.wustl.edu	37	1	207643042	207643042	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	207643042	207643042	A	T	SNP	CR2	ENST00000367057	human	ensembl	74_37	+1	known	missense	c.820	p.I274F	1.000	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322				89	0	0	50	15	23.0769
CR1	0	genome.wustl.edu	37	1	207700196	207700196	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	207700196	207700196	G	A	SNP	CR1	ENST00000367049	human	ensembl	74_37	+1	known	missense	c.985	p.G329S	0.718	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710				231	0	0	136	43	24.0223
PRKCZ	0	genome.wustl.edu	37	1	2077501	2077501	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	2077501	2077501	C	T	SNP	PRKCZ	ENST00000378567	human	ensembl	74_37	+1	known	silent	c.588	p.D196	0.983	pirsf_PKC_zeta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCZ	HGNC	ENSG00000067606				99	0	0	59	15	20.2703
KIF17	0	genome.wustl.edu	37	1	21011475	21011475	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	21011475	21011475	C	T	SNP	KIF17	ENST00000247986	human	ensembl	74_37	-1	known	silent	c.2058	p.V686	0.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245				25	0	0	12	4	25
PTPN14	0	genome.wustl.edu	37	1	214557469	214557469	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	214557469	214557469	T	C	SNP	PTPN14	ENST00000366956	human	ensembl	74_37	-1	known	missense	c.1729	p.T577A	1.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104				75	0	0	42	20	32.2581
PTPN14	0	genome.wustl.edu	37	1	214706334	214706334	+	RNA	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	214706334	214706334	C	A	SNP	PTPN14	ENST00000491277	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.894	-	-	-	no_errors	PTPN14	HGNC	ENSG00000152104				19	0	0	27	8	22.8571
RAP1GAP	0	genome.wustl.edu	37	1	21929337	21929337	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	21929337	21929337	C	T	SNP	RAP1GAP	ENST00000290101	human	ensembl	74_37	-1	known	missense	c.1690	p.A564T	1.000	NULL	pfam_Rap_GAP_dom,pfam_GoLoco_motif,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP	HGNC	ENSG00000076864				75	0	0	51	14	21.5385
EPRS	0	genome.wustl.edu	37	1	220191840	220191840	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	220191840	220191840	C	T	SNP	EPRS	ENST00000366923	human	ensembl	74_37	-1	known	missense	c.1445	p.R482H	1.000	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,tigrfam_Glu-tRNA-synth_arc/euk	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,pfam_WHEP-TRS,pfam_Glu/Gln-tRNA-synth_Ib_codon-bd,pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Pro-tRNA_ligase_II_C,pfam_Anticodon-bd,superfamily_Ribosomal_L25/Gln-tRNA_synth,superfamily_Anticodon-bd,superfamily_Pro-tRNA_synth_II,superfamily_S15_NS1_RNA-bd,superfamily_Glutathione-S-Trfase_C-like,smart_Pro-tRNA_ligase_II_C,prints_Glu/Gln-tRNA-synth,prints_Pro-tRNA-ligase_IIa,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_Pro-tRNA-ligase_IIa_arc-type,tigrfam_Glu-tRNA-synth_arc/euk	-	no_errors	EPRS	HGNC	ENSG00000136628				84	0	0	40	13	24.5283
TMEM63A	0	genome.wustl.edu	37	1	226062014	226062014	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	226062014	226062014	G	A	SNP	TMEM63A	ENST00000366835	human	ensembl	74_37	-1	known	silent	c.240	p.R80	0.990	NULL	pfam_DUF221	-	no_errors	TMEM63A	HGNC	ENSG00000196187				75	0	0	40	8	16.6667
PARP1	0	genome.wustl.edu	37	1	226561998	226561998	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	226561998	226561998	T	C	SNP	PARP1	ENST00000366794	human	ensembl	74_37	-1	known	missense	c.1999	p.K667E	1.000	pfam_Poly(ADP-ribose)pol_reg_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,pirsf_NAD_ADPRT,pfscan_Poly(ADP-ribose)pol_reg_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_Znf_PARP,pfam_PADR1,pfam_WGR_domain,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_WGR_domain,pirsf_NAD_ADPRT,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP1	HGNC	ENSG00000143799				59	0	0	31	16	34.0426
OBSCN	0	genome.wustl.edu	37	1	228564859	228564859	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	228564859	228564859	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.23146	p.E7716K	0.997	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				30	0	0	25	7	21.875
CAPN9	0	genome.wustl.edu	37	1	230937365	230937365	+	RNA	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	230937365	230937365	C	A	SNP	CAPN9	ENST00000480004	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CAPN9	HGNC	ENSG00000135773				84	0	0	41	15	26.7857
TTC13	0	genome.wustl.edu	37	1	231060705	231060705	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	231060705	231060705	C	T	SNP	TTC13	ENST00000366661	human	ensembl	74_37	-1	known	missense	c.1603	p.A535T	0.954	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC13	HGNC	ENSG00000143643				118	0	0	91	24	20.8696
SIPA1L2	0	genome.wustl.edu	37	1	232564165	232564165	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	232564165	232564165	G	A	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	nonsense	c.4402	p.R1468*	0.975	pfam_DUF3401	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				53	0	0	30	14	31.8182
SIPA1L2	0	genome.wustl.edu	37	1	232579387	232579387	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	232579387	232579387	C	T	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.3398	p.G1133D	0.586	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				95	0	0	65	19	22.619
SIPA1L2	0	genome.wustl.edu	37	1	232581486	232581486	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	232581486	232581486	C	T	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.3142	p.D1048N	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				212	0	0	104	38	26.7606
SIPA1L2	0	genome.wustl.edu	37	1	232650347	232650347	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	232650347	232650347	C	T	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.739	p.A247T	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				112	0	0	71	12	14.4578
HTR1D	0	genome.wustl.edu	37	1	23519991	23519991	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	23519991	23519991	G	A	SNP	HTR1D	ENST00000314113	human	ensembl	74_37	-1	known	missense	c.722	p.T241M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT1D_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1D_rcpt,prints_5HT_rcpt	-	no_errors	HTR1D	HGNC	ENSG00000179546				95	0	0	52	22	29.7297
ASAP3	0	genome.wustl.edu	37	1	23782429	23782429	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	23782429	23782429	C	T	SNP	ASAP3	ENST00000336689	human	ensembl	74_37	-1	known	missense	c.293	p.G98D	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP3	HGNC	ENSG00000088280				156	0	0	94	43	31.3869
RYR2	0	genome.wustl.edu	37	1	237872296	237872296	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	237872296	237872296	A	G	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.10034	p.D3345G	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				29	0	0	22	6	21.4286
PITHD1	0	genome.wustl.edu	37	1	24112812	24112812	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	24112812	24112812	C	T	SNP	PITHD1	ENST00000246151	human	ensembl	74_37	+1	known	missense	c.433	p.R145C	1.000	pfam_PITH_dom,superfamily_Galactose-bd-like	pfam_PITH_dom,superfamily_Galactose-bd-like	-	no_errors	PITHD1	HGNC	ENSG00000057757				28	0	0	9	2	18.1818
C1orf101	0	genome.wustl.edu	37	1	244715736	244715736	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	244715736	244715736	T	C	SNP	C1orf101	ENST00000366531	human	ensembl	74_37	+1	known	missense	c.196	p.F66L	0.000	NULL	NULL	-	no_errors	C1orf101	HGNC	ENSG00000179397				80	0	0	43	9	17.3077
COX20	0	genome.wustl.edu	37	1	245005310	245005310	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	245005310	245005310	A	G	SNP	COX20	ENST00000411948	human	ensembl	74_37	+1	known	missense	c.107	p.Y36C	1.000	pfam_Cox20/FAM36A,prints_FAM36A	pfam_Cox20/FAM36A,prints_FAM36A	-	no_errors	COX20	HGNC	ENSG00000203667				51	0	0	31	11	26.1905
KIF26B	0	genome.wustl.edu	37	1	245848855	245848855	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	245848855	245848855	G	A	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	missense	c.2570	p.S857N	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849				100	0	0	44	13	22.807
OR2B11	0	genome.wustl.edu	37	1	247614785	247614785	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	247614785	247614785	G	A	SNP	OR2B11	ENST00000318749	human	ensembl	74_37	-1	known	missense	c.500	p.T167M	0.017	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B11	HGNC	ENSG00000177535				74	0	0	60	14	18.9189
OR2L2	0	genome.wustl.edu	37	1	248202418	248202418	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	248202418	248202418	G	A	SNP	OR2L2	ENST00000366479	human	ensembl	74_37	+1	known	missense	c.849	p.M283I	0.065	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L2	HGNC	ENSG00000203663				143	1	0.694444	88	27	23.4783
SEPN1	0	genome.wustl.edu	37	1	26135266	26135266	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	26135266	26135266	C	T	SNP	SEPN1	ENST00000354177	human	ensembl	74_37	+1	known	missense	c.631	p.P211S	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	SEPN1	HGNC	ENSG00000162430				118	0	0	91	26	22.2222
FGR	0	genome.wustl.edu	37	1	27939528	27939528	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	27939528	27939528	C	T	SNP	FGR	ENST00000374003	human	ensembl	74_37	-1	known	missense	c.1487	p.R496H	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FGR	HGNC	ENSG00000000938				77	0	0	48	19	28.3582
EPB41	0	genome.wustl.edu	37	1	29391662	29391662	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	29391662	29391662	G	T	SNP	EPB41	ENST00000343067	human	ensembl	74_37	+1	known	nonsense	c.2176	p.G726*	1.000	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like,pfscan_FERM_domain	-	no_errors	EPB41	HGNC	ENSG00000159023				82	0	0	31	7	18.4211
PTPRU	0	genome.wustl.edu	37	1	29639169	29639169	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	29639169	29639169	G	A	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	missense	c.3208	p.V1070M	0.998	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656				41	0	0	22	6	21.4286
SPOCD1	0	genome.wustl.edu	37	1	32280862	32280862	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	32280862	32280862	G	A	SNP	SPOCD1	ENST00000360482	human	ensembl	74_37	-1	known	missense	c.73	p.L25F	0.005	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,superfamily_TFIIS_cen_dom,smart_TFS2M	-	no_errors	SPOCD1	HGNC	ENSG00000134668				80	0	0	58	15	20.5479
ZBTB8OS	0	genome.wustl.edu	37	1	33116139	33116139	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	33116139	33116139	G	A	SNP	ZBTB8OS	ENST00000468695	human	ensembl	74_37	-1	known	missense	c.28	p.P10S	0.000	NULL	pfam_Archease_dom,superfamily_Archease_dom	-	no_errors	ZBTB8OS	HGNC	ENSG00000176261				176	0	0	95	35	26.9231
HPCA	0	genome.wustl.edu	37	1	33363951	33363951	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	33363951	33363951	G	A	SNP	HPCA	ENST00000470896	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	HPCA	HGNC	ENSG00000121905				57	0	0	37	11	22.9167
DLGAP3	0	genome.wustl.edu	37	1	35334426	35334426	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	35334426	35334426	C	T	SNP	DLGAP3	ENST00000235180	human	ensembl	74_37	-1	known	silent	c.2265	p.S755	0.005	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP3	HGNC	ENSG00000116544				37	0	0	15	4	21.0526
ZMYM1	0	genome.wustl.edu	37	1	35578792	35578792	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	35578792	35578792	G	A	SNP	ZMYM1	ENST00000359858	human	ensembl	74_37	+1	novel	missense	c.1361	p.R454Q	0.001	NULL	pfam_Znf_MYM,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_TRASH_dom	-	no_errors	ZMYM1	HGNC	ENSG00000197056				45	0	0	28	10	26.3158
ZMYM4	0	genome.wustl.edu	37	1	35885120	35885120	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	35885120	35885120	C	T	SNP	ZMYM4	ENST00000314607	human	ensembl	74_37	+1	known	missense	c.4489	p.R1497C	1.000	pfam_DUF3504	pfam_DUF3504,pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM4	HGNC	ENSG00000146463				97	0	0	55	16	22.5352
THRAP3	0	genome.wustl.edu	37	1	36757044	36757044	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	36757044	36757044	G	T	SNP	THRAP3	ENST00000354618	human	ensembl	74_37	+1	known	missense	c.1815	p.Q605H	1.000	NULL	NULL	-	no_errors	THRAP3	HGNC	ENSG00000054118				71	0	0	25	16	39.0244
GNL2	0	genome.wustl.edu	37	1	38033290	38033290	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	38033290	38033290	G	A	SNP	GNL2	ENST00000373062	human	ensembl	74_37	-1	known	missense	c.2027	p.A676V	0.001	NULL	pfam_NOG2_N_dom,pfam_GTP_binding_domain,superfamily_P-loop_NTPase,prints_GTP_binding_domain	-	no_errors	GNL2	HGNC	ENSG00000134697				89	0	0	53	19	26.3889
RSPO1	0	genome.wustl.edu	37	1	38082196	38082196	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	38082196	38082196	T	C	SNP	RSPO1	ENST00000356545	human	ensembl	74_37	-1	known	silent	c.246	p.G82	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pfam_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO1	HGNC	ENSG00000169218				151	0	0	94	22	18.9655
NDUFS5	0	genome.wustl.edu	37	1	39494443	39494443	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	39494443	39494443	G	A	SNP	NDUFS5	ENST00000372967	human	ensembl	74_37	+1	known	missense	c.47	p.R16Q	0.001	pfam_NADH_UbQ_OxRdtase_FeS-su5	pfam_NADH_UbQ_OxRdtase_FeS-su5,pfam_Cyt_c_biogenesis_Cmc1-like	-	no_errors	NDUFS5	HGNC	ENSG00000168653				87	0	0	52	25	32.4675
FOXJ3	0	genome.wustl.edu	37	1	42664774	42664774	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	42664774	42664774	G	A	SNP	FOXJ3	ENST00000361346	human	ensembl	74_37	-1	known	missense	c.758	p.P253L	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXJ3	HGNC	ENSG00000198815				54	0	0	18	8	30.7692
SLC2A1	0	genome.wustl.edu	37	1	43395570	43395570	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	43395570	43395570	C	T	SNP	SLC2A1	ENST00000426263	human	ensembl	74_37	-1	known	missense	c.653	p.R218H	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,prints_Glu_transpt_1,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A1	HGNC	ENSG00000117394				148	0	0	98	36	26.8657
EBNA1BP2	0	genome.wustl.edu	37	1	43637888	43637888	+	RNA	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	43637888	43637888	A	G	SNP	EBNA1BP2	ENST00000472982	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EBNA1BP2	HGNC	ENSG00000117395				16	0	0	11	5	31.25
TIE1	0	genome.wustl.edu	37	1	43770734	43770734	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	43770734	43770734	C	T	SNP	TIE1	ENST00000372476	human	ensembl	74_37	+1	known	missense	c.271	p.R91C	0.224	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TIE1	HGNC	ENSG00000066056				38	0	0	25	10	28.5714
PTPRF	0	genome.wustl.edu	37	1	44069129	44069129	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	44069129	44069129	G	A	SNP	PTPRF	ENST00000359947	human	ensembl	74_37	+1	known	missense	c.2383	p.V795I	0.976	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRF	HGNC	ENSG00000142949				139	0	0	87	26	23.0088
ERI3	0	genome.wustl.edu	37	1	44713629	44713629	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	44713629	44713629	G	A	SNP	ERI3	ENST00000372257	human	ensembl	74_37	-1	known	missense	c.913	p.R305W	1.000	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	ERI3	HGNC	ENSG00000117419				95	0	0	54	24	30.7692
MAST2	0	genome.wustl.edu	37	1	46497141	46497141	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	46497141	46497141	G	A	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	missense	c.3071	p.R1024H	1.000	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015				66	0	0	50	28	35.8974
CYP4A22	0	genome.wustl.edu	37	1	47610301	47610301	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	47610301	47610301	C	T	SNP	CYP4A22	ENST00000371891	human	ensembl	74_37	+1	known	missense	c.977	p.T326I	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP4A22	HGNC	ENSG00000162365				134	0	0	87	13	13
FOXD2	0	genome.wustl.edu	37	1	47905016	47905016	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	47905016	47905016	C	T	SNP	FOXD2	ENST00000334793	human	ensembl	74_37	+1	known	silent	c.1209	p.G403	0.995	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD2	HGNC	ENSG00000186564				16	0	0	7	6	46.1538
SLC5A9	0	genome.wustl.edu	37	1	48697257	48697257	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	48697257	48697257	G	A	SNP	SLC5A9	ENST00000236495	human	ensembl	74_37	+1	known	silent	c.726	p.T242	0.002	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A9	HGNC	ENSG00000117834				83	0	0	56	15	21.1268
ELAVL4	0	genome.wustl.edu	37	1	50610682	50610682	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	50610682	50610682	C	T	SNP	ELAVL4	ENST00000371821	human	ensembl	74_37	+1	known	silent	c.78	p.S26	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL4	HGNC	ENSG00000162374				68	0	0	39	21	35
ZFYVE9	0	genome.wustl.edu	37	1	52704611	52704611	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	52704611	52704611	A	C	SNP	ZFYVE9	ENST00000287727	human	ensembl	74_37	+1	known	missense	c.1522	p.I508L	1.000	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_SARA_Smad-bd,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE9	HGNC	ENSG00000157077				78	0	0	32	19	37.2549
MYSM1	0	genome.wustl.edu	37	1	59131250	59131250	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	59131250	59131250	A	G	SNP	MYSM1	ENST00000472487	human	ensembl	74_37	-1	known	silent	c.2085	p.Y695	1.000	smart_JAB_MPN_dom	pfam_SWIRM,pfam_JAB_MPN_dom,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,smart_JAB_MPN_dom,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	MYSM1	HGNC	ENSG00000162601				76	0	0	44	9	16.9811
KANK4	0	genome.wustl.edu	37	1	62739457	62739457	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	62739457	62739457	A	G	SNP	KANK4	ENST00000371153	human	ensembl	74_37	-1	known	missense	c.1319	p.M440T	0.000	NULL	pfam_KN_motif,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK4	HGNC	ENSG00000132854				305	0	0	151	57	27.4038
LEPROT	0	genome.wustl.edu	37	1	65895721	65895721	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	65895721	65895721	G	A	SNP	LEPROT	ENST00000371065	human	ensembl	74_37	+1	known	missense	c.269	p.R90H	0.992	pfam_VPS55	pfam_VPS55	-	no_errors	LEPROT	HGNC	ENSG00000213625				225	0	0	151	39	20.5263
LRRC7	0	genome.wustl.edu	37	1	70504499	70504499	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	70504499	70504499	G	A	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	missense	c.2878	p.V960M	1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122				83	0	0	29	19	39.5833
IFI44L	0	genome.wustl.edu	37	1	79107202	79107202	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	79107202	79107202	A	G	SNP	IFI44L	ENST00000370751	human	ensembl	74_37	+1	known	missense	c.1232	p.D411G	0.393	NULL	superfamily_P-loop_NTPase	-	no_errors	IFI44L	HGNC	ENSG00000137959				79	0	0	32	14	30.4348
TTLL7	0	genome.wustl.edu	37	1	84412914	84412914	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	84412914	84412914	G	A	SNP	TTLL7	ENST00000260505	human	ensembl	74_37	-1	known	silent	c.399	p.I133	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL7	HGNC	ENSG00000137941				63	0	0	27	7	20.5882
SEP15	0	genome.wustl.edu	37	1	87369115	87369115	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	87369115	87369115	G	A	SNP	SEP15	ENST00000401030	human	ensembl	74_37	-1	known	missense	c.92	p.A31V	1.000	NULL	NULL	-	no_errors	SEP15	Uniprot_gn	ENSG00000183291				22	0	0	14	2	12.5
GBP7	0	genome.wustl.edu	37	1	89616127	89616127	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	89616127	89616127	G	A	SNP	GBP7	ENST00000294671	human	ensembl	74_37	-1	known	nonsense	c.757	p.R253*	0.002	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP7	HGNC	ENSG00000213512				65	0	0	43	11	20.3704
GBP5	0	genome.wustl.edu	37	1	89735134	89735134	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	89735134	89735134	C	T	SNP	GBP5	ENST00000343435	human	ensembl	74_37	-1	known	silent	c.105	p.T35	0.000	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP5	HGNC	ENSG00000154451				226	0	0	127	46	26.5896
SLC2A7	0	genome.wustl.edu	37	1	9067390	9067390	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	9067390	9067390	C	T	SNP	SLC2A7	ENST00000400906	human	ensembl	74_37	-1	known	missense	c.1171	p.A391T	0.116	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A7	HGNC	ENSG00000197241				102	0	0	65	15	18.75
GPR157	0	genome.wustl.edu	37	1	9164630	9164630	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	9164630	9164630	C	T	SNP	GPR157	ENST00000377411	human	ensembl	74_37	-1	known	missense	c.856	p.V286I	0.377	NULL	pfam_GPCR_2_secretin-like,pfam_GPCR_Rhodpsn,pfam_Frizzled,pfscan_GPCR_Rhodpsn_7TM,pfscan_GPCR_2-like,prints_GCR1-cAMP_receptor	-	no_errors	GPR157	HGNC	ENSG00000180758				46	0	0	27	7	20.5882
H6PD	0	genome.wustl.edu	37	1	9307076	9307076	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	9307076	9307076	G	A	SNP	H6PD	ENST00000377403	human	ensembl	74_37	+1	known	missense	c.679	p.G227S	0.901	pfam_G6P_DH_C	pfam_G6P_DH_C,pfam_G6P_DH_NAD-bd,prints_G6P_DH,tigrfam_6-phosphogluconolactonase_DevB	-	no_errors	H6PD	HGNC	ENSG00000049239				155	0	0	89	32	26.4463
H6PD	0	genome.wustl.edu	37	1	9324704	9324704	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	9324704	9324704	C	T	SNP	H6PD	ENST00000377403	human	ensembl	74_37	+1	known	silent	c.2152	p.L718	0.999	tigrfam_6-phosphogluconolactonase_DevB	pfam_G6P_DH_C,pfam_G6P_DH_NAD-bd,prints_G6P_DH,tigrfam_6-phosphogluconolactonase_DevB	-	no_errors	H6PD	HGNC	ENSG00000049239				115	0	0	60	22	26.8293
DPYD	0	genome.wustl.edu	37	1	98058781	98058781	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	98058781	98058781	G	T	SNP	DPYD	ENST00000370192	human	ensembl	74_37	-1	known	missense	c.1121	p.P374H	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Dihydroorotate_DH_1_2,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_tRNA_hU_synthase,superfamily_Helical_ferredxn,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_Dihydroorotate_DH	-	no_errors	DPYD	HGNC	ENSG00000188641				119	0	0	58	27	31.7647
LPPR4	0	genome.wustl.edu	37	1	99771804	99771804	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	99771804	99771804	C	T	SNP	LPPR4	ENST00000370185	human	ensembl	74_37	+1	known	silent	c.1530	p.P510	0.284	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR4	Uniprot_gn	ENSG00000117600				403	0	0	259	70	21.2766
LDB1	0	genome.wustl.edu	37	10	103868036	103868036	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	103868036	103868036	G	A	SNP	LDB1	ENST00000425280	human	ensembl	74_37	-1	known	silent	c.1050	p.F350	1.000	NULL	NULL	-	no_errors	LDB1	HGNC	ENSG00000198728				75	0	0	39	18	31.5789
PPRC1	0	genome.wustl.edu	37	10	103908352	103908352	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	103908352	103908352	G	A	SNP	PPRC1	ENST00000495914	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PPRC1	HGNC	ENSG00000148840				187	0	0	104	25	19.3798
PDCD11	0	genome.wustl.edu	37	10	105184857	105184857	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	105184857	105184857	C	T	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	silent	c.2880	p.N960	0.959	NULL	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843				88	0	0	65	21	24.4186
CALHM2	0	genome.wustl.edu	37	10	105207116	105207116	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	105207116	105207116	C	T	SNP	CALHM2	ENST00000260743	human	ensembl	74_37	-1	known	silent	c.765	p.A255	0.011	NULL	NULL	-	no_errors	CALHM2	HGNC	ENSG00000138172				135	0	0	72	26	26.5306
COL17A1	0	genome.wustl.edu	37	10	105815734	105815734	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	105815734	105815734	C	T	SNP	COL17A1	ENST00000353479	human	ensembl	74_37	-1	known	missense	c.1493	p.R498H	0.858	NULL	pfam_Collagen	-	no_errors	COL17A1	HGNC	ENSG00000065618				187	0	0	120	39	24.5283
ITPRIP	0	genome.wustl.edu	37	10	106075664	106075664	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	106075664	106075664	T	C	SNP	ITPRIP	ENST00000278071	human	ensembl	74_37	-1	known	missense	c.146	p.Q49R	1.000	NULL	NULL	-	no_errors	ITPRIP	HGNC	ENSG00000148841				145	0	0	106	29	21.4815
ABLIM1	0	genome.wustl.edu	37	10	116417865	116417865	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	116417865	116417865	G	A	SNP	ABLIM1	ENST00000277895	human	ensembl	74_37	-1	known	missense	c.95	p.S32L	0.120	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM1	HGNC	ENSG00000099204				119	0	0	76	32	29.6296
GFRA1	0	genome.wustl.edu	37	10	117884986	117884986	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	117884986	117884986	C	T	SNP	GFRA1	ENST00000355422	human	ensembl	74_37	-1	known	silent	c.516	p.S172	0.051	pfam_GDNF/GAS1,smart_GDNF/GAS1,pirsf_Glial_neurotroph_fac_rcpt_a1/2	pfam_GDNF/GAS1,smart_GDNF/GAS1,pirsf_Glial_neurotroph_fac_rcpt_a1/2,prints_GDNF_rcpt,prints_GDNF_rcpt_A1	-	no_errors	GFRA1	HGNC	ENSG00000151892				56	0	0	36	8	18.1818
RGS10	0	genome.wustl.edu	37	10	121286832	121286832	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	121286832	121286832	C	T	SNP	RGS10	ENST00000369103	human	ensembl	74_37	-1	known	missense	c.154	p.V52M	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS10	HGNC	ENSG00000148908				53	0	0	24	7	22.5806
PLEKHA1	0	genome.wustl.edu	37	10	124152742	124152742	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	124152742	124152742	G	A	SNP	PLEKHA1	ENST00000368990	human	ensembl	74_37	+1	known	missense	c.26	p.R9H	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA1	HGNC	ENSG00000107679				62	0	0	19	7	26.9231
CPXM2	0	genome.wustl.edu	37	10	125528005	125528005	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	125528005	125528005	C	T	SNP	CPXM2	ENST00000368854	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CPXM2	HGNC	ENSG00000121898				49	0	0	22	11	33.3333
C10orf90	0	genome.wustl.edu	37	10	128192609	128192609	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	128192609	128192609	T	C	SNP	C10orf90	ENST00000544758	human	ensembl	74_37	-1	known	missense	c.1451	p.E484G	0.000	NULL	NULL	-	no_errors	C10orf90	HGNC	ENSG00000154493				114	0	0	61	29	32.2222
MKI67	0	genome.wustl.edu	37	10	129914169	129914169	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	129914169	129914169	G	A	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.503	p.A168V	0.000	NULL	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				128	0	0	61	26	29.8851
MKI67	0	genome.wustl.edu	37	10	129921193	129921193	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	129921193	129921193	A	G	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.239	p.V80A	0.011	pfam_FHA_dom,superfamily_SMAD_FHA_domain	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				68	0	0	18	6	25
DPYSL4	0	genome.wustl.edu	37	10	134015485	134015485	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	134015485	134015485	G	A	SNP	DPYSL4	ENST00000338492	human	ensembl	74_37	+1	known	silent	c.1146	p.A382	0.003	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL4	HGNC	ENSG00000151640				126	0	0	84	26	23.6364
KNDC1	0	genome.wustl.edu	37	10	134981025	134981025	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	134981025	134981025	G	A	SNP	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	silent	c.243	p.T81	0.810	smart_KIND	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798				18	0	0	13	6	31.5789
CUBN	0	genome.wustl.edu	37	10	16916494	16916494	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	16916494	16916494	C	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.9115	p.G3039C	0.675	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				95	0	0	62	17	21.519
CUBN	0	genome.wustl.edu	37	10	16942694	16942694	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	16942694	16942694	G	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	silent	c.8340	p.V2780	0.034	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				81	0	0	79	14	15.0538
SPAG6	0	genome.wustl.edu	37	10	22634782	22634782	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	22634782	22634782	C	T	SNP	SPAG6	ENST00000376603	human	ensembl	74_37	+1	known	silent	c.156	p.R52	0.000	NULL	pfam_Armadillo,pfam_HEAT,pfam_26S_Psome_nonATP_su5,superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	SPAG6	HGNC	ENSG00000077327				33	0	0	15	10	40
SVIL	0	genome.wustl.edu	37	10	29754536	29754536	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	29754536	29754536	C	T	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.6121	p.A2041T	0.989	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				95	0	0	40	27	40.2985
ZEB1	0	genome.wustl.edu	37	10	31815671	31815671	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	31815671	31815671	C	T	SNP	ZEB1	ENST00000361642	human	ensembl	74_37	+1	known	nonsense	c.2857	p.R953*	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB1	HGNC	ENSG00000148516				52	0	0	24	4	14.2857
ITGB1	0	genome.wustl.edu	37	10	33211578	33211578	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	33211578	33211578	G	T	SNP	ITGB1	ENST00000374956	human	ensembl	74_37	-1	known	missense	c.1028	p.P343H	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_tail,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB1	HGNC	ENSG00000150093				33	0	0	12	2	14.2857
DIP2C	0	genome.wustl.edu	37	10	395292	395292	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	395292	395292	C	T	SNP	DIP2C	ENST00000280886	human	ensembl	74_37	-1	known	missense	c.3088	p.V1030M	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2C	HGNC	ENSG00000151240				55	0	0	28	17	37.7778
DIP2C	0	genome.wustl.edu	37	10	410407	410407	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	410407	410407	C	T	SNP	DIP2C	ENST00000280886	human	ensembl	74_37	-1	known	missense	c.2384	p.G795D	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2C	HGNC	ENSG00000151240				146	0	0	99	24	19.5122
ZNF485	0	genome.wustl.edu	37	10	44112703	44112703	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	44112703	44112703	T	C	SNP	ZNF485	ENST00000361807	human	ensembl	74_37	+1	known	silent	c.1212	p.H404	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF485	HGNC	ENSG00000198298				63	0	0	44	19	30.1587
AKR1C1	0	genome.wustl.edu	37	10	5014777	5014777	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	5014777	5014777	G	A	SNP	AKR1C1	ENST00000380872	human	ensembl	74_37	+1	known	missense	c.682	p.V228M	0.982	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1C1	HGNC	ENSG00000187134				165	0	0	94	30	24.1935
CALML5	0	genome.wustl.edu	37	10	5541225	5541225	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	5541225	5541225	G	A	SNP	CALML5	ENST00000380332	human	ensembl	74_37	-1	known	silent	c.177	p.D59	0.261	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALML5	HGNC	ENSG00000178372				138	0	0	86	38	30.6452
PCDH15	0	genome.wustl.edu	37	10	55581859	55581859	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	55581859	55581859	T	C	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.5627	p.Q1876R	0.417	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				176	1	0.564972	66	28	29.7872
SFMBT2	0	genome.wustl.edu	37	10	7214497	7214497	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	7214497	7214497	C	T	SNP	SFMBT2	ENST00000361972	human	ensembl	74_37	-1	known	missense	c.2111	p.R704Q	1.000	superfamily_ARM-type_fold	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_Pointed_dom,superfamily_SAM/pointed,superfamily_ARM-type_fold,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT2	HGNC	ENSG00000198879				68	0	0	27	18	40
CDH23	0	genome.wustl.edu	37	10	73544152	73544152	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	73544152	73544152	G	A	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.5492	p.R1831Q	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				99	0	0	57	19	25
CHST3	0	genome.wustl.edu	37	10	73767281	73767281	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	73767281	73767281	G	A	SNP	CHST3	ENST00000373115	human	ensembl	74_37	+1	known	silent	c.492	p.P164	0.425	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST3	HGNC	ENSG00000122863				54	0	0	30	11	26.8293
DNAJC9-AS1	0	genome.wustl.edu	37	10	75035130	75035130	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	75035130	75035130	C	T	SNP	DNAJC9-AS1	ENST00000440197	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DNAJC9-AS1	HGNC	ENSG00000236756				42	0	0	25	17	40.4762
ANXA7	0	genome.wustl.edu	37	10	75143004	75143004	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	75143004	75143004	G	A	SNP	ANXA7	ENST00000372919	human	ensembl	74_37	-1	known	nonsense	c.913	p.R305*	0.870	pfam_Annexin_repeat,smart_Annexin_repeat,prints_AnnexinIV	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinVII,prints_AnnexinIV	-	no_errors	ANXA7	HGNC	ENSG00000138279				70	0	0	28	5	15.1515
TSPAN14	0	genome.wustl.edu	37	10	82269142	82269142	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	82269142	82269142	G	A	SNP	TSPAN14	ENST00000372156	human	ensembl	74_37	+1	known	missense	c.365	p.R122Q	0.998	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN14	HGNC	ENSG00000108219				78	0	0	54	22	28.9474
MMRN2	0	genome.wustl.edu	37	10	88702923	88702923	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	88702923	88702923	C	T	SNP	MMRN2	ENST00000372027	human	ensembl	74_37	-1	known	missense	c.1618	p.V540M	0.007	superfamily_tRNA-bd_arm	pfam_C1q,pfam_EMI_domain,superfamily_Tumour_necrosis_fac-like_dom,superfamily_tRNA-bd_arm,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	MMRN2	HGNC	ENSG00000173269				36	0	0	24	13	35.1351
ACTA2-AS1	0	genome.wustl.edu	37	10	90699177	90699177	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	90699177	90699177	G	A	SNP	ACTA2-AS1	ENST00000437930	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	ACTA2-AS1	HGNC	ENSG00000180139				59	0	0	41	11	21.1538
MYOF	0	genome.wustl.edu	37	10	95097652	95097652	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	95097652	95097652	A	G	SNP	MYOF	ENST00000359263	human	ensembl	74_37	-1	known	missense	c.4357	p.W1453R	1.000	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	MYOF	HGNC	ENSG00000138119				143	0	0	73	18	19.7802
PDLIM1	0	genome.wustl.edu	37	10	96997770	96997770	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	96997770	96997770	A	G	SNP	PDLIM1	ENST00000329399	human	ensembl	74_37	-1	known	missense	c.902	p.V301A	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,smart_ZASP,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM1	HGNC	ENSG00000107438				37	0	0	27	10	27.027
SORBS1	0	genome.wustl.edu	37	10	97096555	97096555	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	97096555	97096555	C	T	SNP	SORBS1	ENST00000361941	human	ensembl	74_37	-1	known	missense	c.3362	p.R1121H	0.729	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS1	HGNC	ENSG00000095637				82	0	0	50	23	31.5068
TCTN3	0	genome.wustl.edu	37	10	97423995	97423995	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	97423995	97423995	C	T	SNP	TCTN3	ENST00000371217	human	ensembl	74_37	-1	known	silent	c.1653	p.Q551	1.000	NULL	pfam_DUF1619	-	no_errors	TCTN3	HGNC	ENSG00000119977				327	0	0	231	65	21.9595
ANGPTL5	0	genome.wustl.edu	37	11	101775632	101775632	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	101775632	101775632	C	T	SNP	ANGPTL5	ENST00000334289	human	ensembl	74_37	-1	known	missense	c.352	p.E118K	1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPTL5	HGNC	ENSG00000187151				58	0	0	37	7	15.9091
KIAA1377	0	genome.wustl.edu	37	11	101834251	101834251	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	101834251	101834251	C	T	SNP	KIAA1377	ENST00000263468	human	ensembl	74_37	+1	known	missense	c.2485	p.P829S	0.070	NULL	NULL	-	no_errors	KIAA1377	HGNC	ENSG00000110318				49	0	0	29	9	23.6842
MUC2	0	genome.wustl.edu	37	11	1090881	1090881	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	1090881	1090881	C	T	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.3776	p.T1259M	0.003	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				65	0	0	39	16	29.0909
DRD2	0	genome.wustl.edu	37	11	113295137	113295137	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	113295137	113295137	G	A	SNP	DRD2	ENST00000355319	human	ensembl	74_37	-1	known	silent	c.237	p.A79	0.531	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopamine_D2_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt	-	no_errors	DRD2	HGNC	ENSG00000149295				78	0	0	57	21	26.9231
HTR3A	0	genome.wustl.edu	37	11	113857318	113857318	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	113857318	113857318	G	A	SNP	HTR3A	ENST00000355556	human	ensembl	74_37	+1	known	missense	c.802	p.V268M	0.997	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_5HT3_rcpt_A,prints_5HT3_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	HTR3A	HGNC	ENSG00000166736				140	0	0	58	26	30.9524
HTR3A	0	genome.wustl.edu	37	11	113857683	113857683	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	113857683	113857683	C	T	SNP	HTR3A	ENST00000355556	human	ensembl	74_37	+1	known	silent	c.1167	p.I389	0.001	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_5HT3_rcpt_A,prints_5HT3_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	HTR3A	HGNC	ENSG00000166736				100	0	0	49	12	19.6721
TMPRSS13	0	genome.wustl.edu	37	11	117780651	117780651	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	117780651	117780651	C	T	SNP	TMPRSS13	ENST00000445164	human	ensembl	74_37	-1	known	missense	c.979	p.V327M	1.000	pirsf_Peptidase_S1A_TMPRSS13,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Peptidase_S1A_TMPRSS13,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_SRCR,pfscan_Peptidase_S1	-	no_errors	TMPRSS13	HGNC	ENSG00000137747				100	0	0	50	26	34.2105
IL10RA	0	genome.wustl.edu	37	11	117869864	117869864	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	117869864	117869864	C	T	SNP	IL10RA	ENST00000227752	human	ensembl	74_37	+1	known	silent	c.1245	p.D415	0.000	NULL	superfamily_Fibronectin_type3	-	no_errors	IL10RA	HGNC	ENSG00000110324				83	0	0	63	19	23.1707
VWA5A	0	genome.wustl.edu	37	11	124016059	124016059	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	124016059	124016059	G	A	SNP	VWA5A	ENST00000392748	human	ensembl	74_37	+1	known	missense	c.2270	p.R757H	0.000	NULL	pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5A	HGNC	ENSG00000110002				65	0	0	57	12	17.3913
SPA17	0	genome.wustl.edu	37	11	124564263	124564263	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	124564263	124564263	G	A	SNP	SPA17	ENST00000227135	human	ensembl	74_37	+1	putative	missense	c.377	p.R126Q	1.000	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pirsf_Sp17,pfscan_IQ_motif_EF-hand-BS	pfam_cAMP_dep_PK_reg_su_I/II_a/b,pfam_IQ_motif_EF-hand-BS,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_P-loop_NTPase,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_IQ_motif_EF-hand-BS,pirsf_Sp17,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SPA17	HGNC	ENSG00000064199				146	1	0.680272	74	13	14.9425
ROBO3	0	genome.wustl.edu	37	11	124750398	124750398	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	124750398	124750398	C	T	SNP	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	missense	c.4043	p.S1348F	0.998	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134				16	0	0	10	3	23.0769
PKNOX2	0	genome.wustl.edu	37	11	125301348	125301348	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	125301348	125301348	C	T	SNP	PKNOX2	ENST00000530517	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.888	-	-	-	no_errors	PKNOX2	HGNC	ENSG00000165495				35	0	0	13	6	31.5789
MUC5B	0	genome.wustl.edu	37	11	1267081	1267081	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	1267081	1267081	T	C	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.8980	p.W2994R	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				428	0	0	248	92	27.0588
ARNTL	0	genome.wustl.edu	37	11	13398205	13398205	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	13398205	13398205	C	T	SNP	ARNTL	ENST00000389708	human	ensembl	74_37	+1	known	missense	c.1439	p.A480V	1.000	NULL	pfam_PAS_fold,pfam_PAS_fold_3,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	ARNTL	HGNC	ENSG00000133794				247	0	0	148	54	26.7327
COPB1	0	genome.wustl.edu	37	11	14502625	14502625	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	14502625	14502625	G	A	SNP	COPB1	ENST00000249923	human	ensembl	74_37	-1	known	silent	c.976	p.L326	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	-	no_errors	COPB1	HGNC	ENSG00000129083				70	0	0	40	10	20
INSC	0	genome.wustl.edu	37	11	15170767	15170767	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	15170767	15170767	C	A	SNP	INSC	ENST00000379554	human	ensembl	74_37	+1	known	missense	c.188	p.P63Q	0.007	NULL	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	INSC	HGNC	ENSG00000188487				49	0	0	24	11	31.4286
ABCC8	0	genome.wustl.edu	37	11	17482094	17482094	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	17482094	17482094	G	A	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	silent	c.952	p.L318	1.000	superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071				208	0	0	126	45	26.3158
CTSD	0	genome.wustl.edu	37	11	1774895	1774895	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	1774895	1774895	C	T	SNP	CTSD	ENST00000236671	human	ensembl	74_37	-1	known	silent	c.1077	p.S359	0.821	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	CTSD	HGNC	ENSG00000117984				55	0	0	39	16	29.0909
E2F8	0	genome.wustl.edu	37	11	19256571	19256571	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	19256571	19256571	G	A	SNP	E2F8	ENST00000250024	human	ensembl	74_37	-1	known	silent	c.486	p.N162	0.229	pfam_E2F_TDP	pfam_E2F_TDP	-	no_errors	E2F8	HGNC	ENSG00000129173				36	0	0	21	8	27.5862
KIAA1549L	0	genome.wustl.edu	37	11	33565125	33565125	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	33565125	33565125	G	A	SNP	KIAA1549L	ENST00000389726	human	ensembl	74_37	+1	known	silent	c.1125	p.S375	0.758	NULL	NULL	-	no_errors	KIAA1549L	HGNC	ENSG00000110427				72	0	0	43	13	23.2143
CHRNA10	0	genome.wustl.edu	37	11	3688473	3688473	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	3688473	3688473	A	G	SNP	CHRNA10	ENST00000250699	human	ensembl	74_37	-1	known	missense	c.884	p.V295A	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA10	HGNC	ENSG00000129749				29	0	0	13	3	18.75
NUP98	0	genome.wustl.edu	37	11	3800453	3800453	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	3800453	3800453	A	C	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.111	p.F37L	1.000	NULL	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713				240	0	0	123	47	27.6471
PHF21A	0	genome.wustl.edu	37	11	46098321	46098321	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	46098321	46098321	G	T	SNP	PHF21A	ENST00000257821	human	ensembl	74_37	-1	known	missense	c.137	p.A46D	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21A	HGNC	ENSG00000135365				70	0	0	45	9	16.6667
TRIM68	0	genome.wustl.edu	37	11	4622048	4622048	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	4622048	4622048	G	A	SNP	TRIM68	ENST00000300747	human	ensembl	74_37	-1	known	missense	c.916	p.R306C	0.003	superfamily_ConA-like_lec_gl_sf,smart_PRY,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM68	HGNC	ENSG00000167333				57	0	0	40	10	20
CHRM4	0	genome.wustl.edu	37	11	46407356	46407356	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	46407356	46407356	T	A	SNP	CHRM4	ENST00000433765	human	ensembl	74_37	-1	known	missense	c.752	p.K251M	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn,prints_Musac_Ach_M4_rcpt	-	no_errors	CHRM4	HGNC	ENSG00000180720				24	0	0	23	7	23.3333
MYBPC3	0	genome.wustl.edu	37	11	47357492	47357492	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	47357492	47357492	C	T	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	silent	c.2673	p.R891	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571				12	0	0	9	4	30.7692
MYBPC3	0	genome.wustl.edu	37	11	47364636	47364636	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	47364636	47364636	C	T	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	silent	c.1287	p.A429	0.049	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571				31	0	0	25	8	24.2424
MYBPC3	0	genome.wustl.edu	37	11	47365114	47365114	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	47365114	47365114	G	A	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	silent	c.1152	p.T384	0.138	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571				25	0	0	27	8	22.8571
AGBL2	0	genome.wustl.edu	37	11	47681799	47681799	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	47681799	47681799	T	C	SNP	AGBL2	ENST00000357610	human	ensembl	74_37	-1	known	missense	c.2641	p.R881G	0.051	NULL	pfam_Peptidase_M14	-	no_errors	AGBL2	HGNC	ENSG00000165923				100	0	0	40	21	34.4262
OR8H1	0	genome.wustl.edu	37	11	56057917	56057917	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	56057917	56057917	C	T	SNP	OR8H1	ENST00000313022	human	ensembl	74_37	-1	known	missense	c.622	p.V208M	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H1	HGNC	ENSG00000181693				126	0	0	85	24	22.0183
OR5M1	0	genome.wustl.edu	37	11	56380954	56380954	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	56380954	56380954	C	T	SNP	OR5M1	ENST00000526538	human	ensembl	74_37	-1	known	missense	c.25	p.V9M	0.023	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M1	HGNC	ENSG00000255012				106	0	0	65	21	24.4186
TRIM5	0	genome.wustl.edu	37	11	5701381	5701381	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	5701381	5701381	T	C	SNP	TRIM5	ENST00000305836	human	ensembl	74_37	-1	known	silent	c.27	p.V9	0.430	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM5	HGNC	ENSG00000132256				113	0	0	59	18	23.3766
OR5B12	0	genome.wustl.edu	37	11	58207240	58207240	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	58207240	58207240	G	A	SNP	OR5B12	ENST00000302572	human	ensembl	74_37	-1	known	missense	c.385	p.H129Y	0.053	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR5B12	HGNC	ENSG00000172362				128	0	0	73	20	21.5054
OR56A3	0	genome.wustl.edu	37	11	5968802	5968802	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	5968802	5968802	G	A	SNP	OR56A3	ENST00000329564	human	ensembl	74_37	+1	known	missense	c.226	p.V76M	0.381	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR56A3	HGNC	ENSG00000184478				224	0	0	134	38	22.093
TMEM132A	0	genome.wustl.edu	37	11	60703479	60703479	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	60703479	60703479	C	T	SNP	TMEM132A	ENST00000005286	human	ensembl	74_37	+1	known	silent	c.2175	p.L725	0.001	NULL	NULL	-	no_errors	TMEM132A	HGNC	ENSG00000006118				73	0	0	46	16	25.8065
CD6	0	genome.wustl.edu	37	11	60777348	60777348	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	60777348	60777348	T	C	SNP	CD6	ENST00000313421	human	ensembl	74_37	+1	known	splice_site	c.1084+2	e5+2	1.000	-	-	-	no_errors	CD6	HGNC	ENSG00000013725				58	0	0	66	6	8.33333
CD5	0	genome.wustl.edu	37	11	60892565	60892565	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	60892565	60892565	C	A	SNP	CD5	ENST00000347785	human	ensembl	74_37	+1	known	silent	c.1341	p.S447	0.000	prints_Tcell_CD5	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Tcell_CD5,prints_SRCR	-	no_errors	CD5	HGNC	ENSG00000110448				96	0	0	56	15	21.1268
CHRM1	0	genome.wustl.edu	37	11	62677864	62677864	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	62677864	62677864	T	C	SNP	CHRM1	ENST00000306960	human	ensembl	74_37	-1	known	missense	c.709	p.S237G	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M1_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM1	HGNC	ENSG00000168539				81	0	0	55	22	28.5714
SLC22A8	0	genome.wustl.edu	37	11	62760719	62760719	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	62760719	62760719	C	T	SNP	SLC22A8	ENST00000336232	human	ensembl	74_37	-1	known	missense	c.1619	p.G540D	0.000	NULL	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A8	HGNC	ENSG00000149452				30	0	0	35	4	10.2564
PLA2G16	0	genome.wustl.edu	37	11	63357702	63357702	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	63357702	63357702	G	A	SNP	PLA2G16	ENST00000323646	human	ensembl	74_37	-1	known	missense	c.257	p.P86L	0.995	pfam_LRAT-like_dom	pfam_LRAT-like_dom	-	no_errors	PLA2G16	HGNC	ENSG00000176485				142	0	0	83	18	17.8218
FLRT1	0	genome.wustl.edu	37	11	63883777	63883777	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	63883777	63883777	C	T	SNP	FLRT1	ENST00000246841	human	ensembl	74_37	+1	known	missense	c.38	p.T13M	0.307	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT1	HGNC	ENSG00000126500				23	0	0	21	6	22.2222
SLC22A12	0	genome.wustl.edu	37	11	64367173	64367173	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	64367173	64367173	G	A	SNP	SLC22A12	ENST00000377574	human	ensembl	74_37	+1	known	missense	c.1096	p.G366S	1.000	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A12	HGNC	ENSG00000197891				80	0	0	53	19	26.3889
NRXN2	0	genome.wustl.edu	37	11	64390471	64390471	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	64390471	64390471	C	A	SNP	NRXN2	ENST00000265459	human	ensembl	74_37	-1	known	missense	c.3927	p.Q1309H	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076				31	0	0	25	7	21.875
NAALADL1	0	genome.wustl.edu	37	11	64821729	64821729	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	64821729	64821729	C	A	SNP	NAALADL1	ENST00000358658	human	ensembl	74_37	-1	known	missense	c.985	p.A329S	0.000	NULL	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL1	HGNC	ENSG00000168060				64	0	0	33	12	26.6667
TIGD3	0	genome.wustl.edu	37	11	65123482	65123482	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	65123482	65123482	G	A	SNP	TIGD3	ENST00000309880	human	ensembl	74_37	+1	known	missense	c.203	p.R68H	1.000	superfamily_Homeodomain-like	pfam_HTH_CenpB_DNA-bd_dom,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD3	HGNC	ENSG00000173825				203	0	0	127	53	29.4444
KCNK7	0	genome.wustl.edu	37	11	65361010	65361010	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	65361010	65361010	G	A	SNP	KCNK7	ENST00000340313	human	ensembl	74_37	-1	known	silent	c.655	p.L219	1.000	pirsf_2pore_dom_K_chnl_TASK,pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl	pirsf_2pore_dom_K_chnl_TASK,pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TWIK	-	no_errors	KCNK7	HGNC	ENSG00000173338				83	0	0	53	32	37.6471
PCNXL3	0	genome.wustl.edu	37	11	65403961	65403961	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	65403961	65403961	C	A	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	missense	c.5693	p.P1898H	0.991	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136				51	0	0	29	9	23.6842
RELA	0	genome.wustl.edu	37	11	65422377	65422377	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	65422377	65422377	G	T	SNP	RELA	ENST00000406246	human	ensembl	74_37	-1	known	silent	c.1128	p.A376	0.865	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELA	HGNC	ENSG00000173039				16	0	0	13	6	31.5789
DNHD1	0	genome.wustl.edu	37	11	6592478	6592478	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	6592478	6592478	G	A	SNP	DNHD1	ENST00000254579	human	ensembl	74_37	+1	known	missense	c.13736	p.R4579H	0.518	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,superfamily_P-loop_NTPase,superfamily_t-SNARE	-	no_errors	DNHD1	HGNC	ENSG00000179532				34	0	0	29	10	25.641
DCHS1	0	genome.wustl.edu	37	11	6648207	6648207	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	6648207	6648207	G	A	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	silent	c.6063	p.R2021	0.214	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341				54	0	0	39	9	18.75
SPTBN2	0	genome.wustl.edu	37	11	66483313	66483313	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	66483313	66483313	C	T	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	silent	c.297	p.S99	0.004	pirsf_Spectrin_bsu,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898				43	0	0	23	13	36.1111
CABP2	0	genome.wustl.edu	37	11	67287382	67287382	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	67287382	67287382	G	A	SNP	CABP2	ENST00000294288	human	ensembl	74_37	-1	known	silent	c.519	p.S173	0.361	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP2	HGNC	ENSG00000167791				54	0	0	38	13	25.4902
LRP5	0	genome.wustl.edu	37	11	68181349	68181349	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	68181349	68181349	G	A	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	missense	c.2696	p.R899H	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337				72	0	0	50	21	29.5775
MTL5	0	genome.wustl.edu	37	11	68483408	68483408	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	68483408	68483408	C	A	SNP	MTL5	ENST00000255087	human	ensembl	74_37	-1	known	splice_site	c.918-1	e6-1	1.000	-	-	-	no_errors	MTL5	HGNC	ENSG00000132749				24	0	0	15	6	28.5714
DEAF1	0	genome.wustl.edu	37	11	688355	688355	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	688355	688355	C	A	SNP	DEAF1	ENST00000382409	human	ensembl	74_37	-1	known	missense	c.493	p.G165C	1.000	NULL	pfam_SAND_dom,pfam_Znf_MYND,superfamily_SAND_dom-like,smart_SAND_dom,pfscan_Znf_MYND,pfscan_SAND_dom	-	no_errors	DEAF1	HGNC	ENSG00000177030				57	0	0	23	14	37.8378
NADSYN1	0	genome.wustl.edu	37	11	71183524	71183524	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	71183524	71183524	T	C	SNP	NADSYN1	ENST00000319023	human	ensembl	74_37	+1	known	missense	c.437	p.M146T	1.000	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Gln-dep_NAD_synthase,pfscan_C-N_Hydrolase	pfam_C-N_Hydrolase,pfam_NAD/GMP_synthase,superfamily_C-N_Hydrolase,pirsf_Gln-dep_NAD_synthase,pfscan_C-N_Hydrolase,tigrfam_NAD_synthase	-	no_errors	NADSYN1	HGNC	ENSG00000172890				62	0	0	35	11	23.913
MRPL48	0	genome.wustl.edu	37	11	73570971	73570971	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	73570971	73570971	A	G	SNP	MRPL48	ENST00000310614	human	ensembl	74_37	+1	known	missense	c.391	p.T131A	1.000	pfam_Ribosomal_S10_dom,superfamily_Ribosomal_S10_dom	pfam_Ribosomal_S10_dom,superfamily_Ribosomal_S10_dom	-	no_errors	MRPL48	HGNC	ENSG00000175581				37	0	0	30	6	16.6667
C2CD3	0	genome.wustl.edu	37	11	73759343	73759343	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	73759343	73759343	G	A	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	missense	c.5402	p.T1801M	0.584	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014				46	0	0	22	6	21.4286
C2CD3	0	genome.wustl.edu	37	11	73785543	73785543	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	73785543	73785543	T	C	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	missense	c.4706	p.H1569R	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014				67	0	0	38	20	34.4828
KLHL35	0	genome.wustl.edu	37	11	75139513	75139513	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	75139513	75139513	G	A	SNP	KLHL35	ENST00000539798	human	ensembl	74_37	-1	known	missense	c.1040	p.A347V	0.998	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL35	HGNC	ENSG00000149243				87	0	0	44	19	30.1587
CAPN5	0	genome.wustl.edu	37	11	76831954	76831954	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	76831954	76831954	C	T	SNP	CAPN5	ENST00000278559	human	ensembl	74_37	+1	known	missense	c.1486	p.R496W	0.998	superfamily_Calpain_domain_III,smart_Calpain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN5	HGNC	ENSG00000149260				190	1	0.52356	117	32	21.4765
MYO7A	0	genome.wustl.edu	37	11	76910654	76910654	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	76910654	76910654	T	C	SNP	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	missense	c.4643	p.L1548P	1.000	pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474				27	0	0	12	6	33.3333
KCTD21	0	genome.wustl.edu	37	11	77885584	77885584	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	77885584	77885584	G	A	SNP	KCTD21	ENST00000340067	human	ensembl	74_37	-1	known	missense	c.17	p.T6M	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	KCTD21	HGNC	ENSG00000188997				30	0	0	15	7	31.8182
TENM4	0	genome.wustl.edu	37	11	78380838	78380838	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	78380838	78380838	T	C	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	silent	c.6552	p.G2184	0.723	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				67	0	0	40	15	27.2727
EED	0	genome.wustl.edu	37	11	85963259	85963259	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	85963259	85963259	T	C	SNP	EED	ENST00000263360	human	ensembl	74_37	+1	known	missense	c.337	p.F113L	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EED	HGNC	ENSG00000074266				83	0	0	36	20	35.7143
TYR	0	genome.wustl.edu	37	11	88911805	88911805	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	88911805	88911805	T	C	SNP	TYR	ENST00000263321	human	ensembl	74_37	+1	known	silent	c.684	p.D228	0.999	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498				118	0	0	54	29	34.9398
FOLH1B	0	genome.wustl.edu	37	11	89424667	89424667	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	89424667	89424667	C	T	SNP	FOLH1B	ENST00000525540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612				49	0	0	31	13	29.5455
CKAP4	0	genome.wustl.edu	37	12	106633826	106633826	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	106633826	106633826	C	T	SNP	CKAP4	ENST00000378026	human	ensembl	74_37	-1	known	missense	c.785	p.S262N	1.000	NULL	superfamily_Tscrpt_elong_fac_GreA/B_N,superfamily_STAT_TF_coiled-coil	-	no_errors	CKAP4	HGNC	ENSG00000136026				191	0	0	86	57	39.8601
SART3	0	genome.wustl.edu	37	12	108931976	108931976	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	108931976	108931976	G	A	SNP	SART3	ENST00000228284	human	ensembl	74_37	-1	known	nonsense	c.1066	p.R356*	0.999	smart_HAT	pfam_RRM_dom,pfam_LSM_interact,smart_HAT,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SART3	HGNC	ENSG00000075856				67	0	0	42	27	39.1304
DAO	0	genome.wustl.edu	37	12	109278816	109278816	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	109278816	109278816	G	A	SNP	DAO	ENST00000228476	human	ensembl	74_37	+1	known	missense	c.34	p.G12R	1.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase	-	no_errors	DAO	HGNC	ENSG00000110887				121	0	0	93	25	21.1864
TRPV4	0	genome.wustl.edu	37	12	110236479	110236479	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	110236479	110236479	G	A	SNP	TRPV4	ENST00000261740	human	ensembl	74_37	-1	known	silent	c.1092	p.A364	0.846	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV4_channel,tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,prints_TRPV4_channel,tigrfam_TRP_channel	-	no_errors	TRPV4	HGNC	ENSG00000111199				110	0	0	76	23	23.2323
GIT2	0	genome.wustl.edu	37	12	110383069	110383069	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	110383069	110383069	C	T	SNP	GIT2	ENST00000355312	human	ensembl	74_37	-1	known	missense	c.1727	p.R576Q	1.000	NULL	pfam_GIT1_C,pfam_GIT_SHD,pfam_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_ArfGAP,smart_Ankyrin_rpt,smart_GIT_SHD,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	GIT2	HGNC	ENSG00000139436				31	0	0	15	7	31.8182
ANAPC7	0	genome.wustl.edu	37	12	110819722	110819722	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	110819722	110819722	G	A	SNP	ANAPC7	ENST00000455511	human	ensembl	74_37	-1	known	missense	c.1069	p.R357W	0.993	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ANAPC7	HGNC	ENSG00000196510				21	0	0	14	9	39.1304
MYL2	0	genome.wustl.edu	37	12	111352053	111352053	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	111352053	111352053	T	C	SNP	MYL2	ENST00000228841	human	ensembl	74_37	-1	known	missense	c.211	p.K71E	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MYL2	HGNC	ENSG00000111245				59	0	0	41	9	18
CUX2	0	genome.wustl.edu	37	12	111733145	111733145	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	111733145	111733145	A	G	SNP	CUX2	ENST00000261726	human	ensembl	74_37	+1	known	missense	c.569	p.Q190R	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_Prefoldin,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX2	HGNC	ENSG00000111249				36	0	0	42	11	20.7547
SLC8B1	0	genome.wustl.edu	37	12	113745598	113745598	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	113745598	113745598	C	T	SNP	SLC8B1	ENST00000202831	human	ensembl	74_37	-1	known	missense	c.1309	p.A437T	1.000	pfam_NaCa_Exmemb	pfam_NaCa_Exmemb	-	no_errors	SLC8B1	HGNC	ENSG00000089060				84	0	0	72	17	19.1011
KSR2	0	genome.wustl.edu	37	12	117914383	117914383	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	117914383	117914383	C	T	SNP	KSR2	ENST00000339824	human	ensembl	74_37	-1	known	missense	c.2468	p.R823H	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	KSR2	HGNC	ENSG00000171435				30	0	0	9	9	50
KSR2	0	genome.wustl.edu	37	12	118199074	118199074	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	118199074	118199074	G	A	SNP	KSR2	ENST00000339824	human	ensembl	74_37	-1	known	missense	c.728	p.S243L	0.882	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	KSR2	HGNC	ENSG00000171435				107	0	0	55	51	48.1132
ORAI1	0	genome.wustl.edu	37	12	122079120	122079120	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	122079120	122079120	G	A	SNP	ORAI1	ENST00000330079	human	ensembl	74_37	+1	known	silent	c.483	p.S161	0.000	pfam_CRAC_channel	pfam_CRAC_channel	-	no_errors	ORAI1	HGNC	ENSG00000182500				75	0	0	61	36	37.1134
MORN3	0	genome.wustl.edu	37	12	122092338	122092338	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	122092338	122092338	C	T	SNP	MORN3	ENST00000355329	human	ensembl	74_37	-1	known	missense	c.305	p.G102D	1.000	smart_MORN	pfam_MORN,smart_MORN	-	no_errors	MORN3	HGNC	ENSG00000139714				20	0	0	5	9	64.2857
SBNO1	0	genome.wustl.edu	37	12	123829936	123829936	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	123829936	123829936	C	T	SNP	SBNO1	ENST00000420886	human	ensembl	74_37	-1	known	missense	c.419	p.R140Q	0.808	NULL	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697				119	0	0	74	42	36.2069
GTF2H3	0	genome.wustl.edu	37	12	124139506	124139506	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	124139506	124139506	T	C	SNP	GTF2H3	ENST00000543341	human	ensembl	74_37	+1	known	silent	c.522	p.Y174	0.938	pfam_TFIIH_Tfb4/p34,tigrfam_TFIIH_Tfb4/p34	pfam_TFIIH_Tfb4/p34,tigrfam_TFIIH_Tfb4/p34	-	no_errors	GTF2H3	HGNC	ENSG00000111358				80	0	0	67	15	18.2927
DHX37	0	genome.wustl.edu	37	12	125449495	125449495	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	125449495	125449495	G	A	SNP	DHX37	ENST00000308736	human	ensembl	74_37	-1	known	missense	c.1793	p.A598V	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX37	HGNC	ENSG00000150990				21	0	0	16	7	30.4348
TMEM132B	0	genome.wustl.edu	37	12	125834469	125834469	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	125834469	125834469	G	A	SNP	TMEM132B	ENST00000299308	human	ensembl	74_37	+1	known	missense	c.524	p.R175Q	1.000	NULL	NULL	-	no_errors	TMEM132B	HGNC	ENSG00000139364				117	0	0	86	24	21.8182
DUSP16	0	genome.wustl.edu	37	12	12630702	12630702	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	12630702	12630702	C	T	SNP	DUSP16	ENST00000228862	human	ensembl	74_37	-1	known	missense	c.1063	p.V355M	0.002	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP16	HGNC	ENSG00000111266				45	0	0	41	7	14.5833
GLT1D1	0	genome.wustl.edu	37	12	129442187	129442187	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	129442187	129442187	A	C	SNP	GLT1D1	ENST00000442111	human	ensembl	74_37	+1	known	missense	c.878	p.Q293P	1.000	pfam_Glyco_trans_1	pfam_Glyco_trans_1	-	no_errors	GLT1D1	HGNC	ENSG00000151948				62	0	0	27	17	38.6364
FZD10	0	genome.wustl.edu	37	12	130647800	130647800	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	130647800	130647800	G	A	SNP	FZD10	ENST00000229030	human	ensembl	74_37	+1	known	missense	c.313	p.A105T	1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD10	HGNC	ENSG00000111432				239	0	0	165	48	22.5352
EP400	0	genome.wustl.edu	37	12	132475230	132475230	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	132475230	132475230	C	T	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	missense	c.2708	p.A903V	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				81	0	0	70	11	13.5802
CHFR	0	genome.wustl.edu	37	12	133428216	133428216	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	133428216	133428216	C	T	SNP	CHFR	ENST00000266880	human	ensembl	74_37	-1	known	missense	c.1513	p.A505T	0.945	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Znf_RING,pfscan_FHA_dom,pfscan_Znf_RING	-	no_errors	CHFR	HGNC	ENSG00000072609				320	0	0	177	105	37.234
WNT5B	0	genome.wustl.edu	37	12	1755054	1755054	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	1755054	1755054	G	A	SNP	WNT5B	ENST00000310594	human	ensembl	74_37	+1	known	missense	c.716	p.R239H	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt	-	no_errors	WNT5B	HGNC	ENSG00000111186				106	1	0.934579	77	29	27.3585
PLCZ1	0	genome.wustl.edu	37	12	18854570	18854570	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	18854570	18854570	C	A	SNP	PLCZ1	ENST00000538330	human	ensembl	74_37	-1	putative	missense	c.228	p.E76D	0.430	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_Pinositol-sp_Y,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCZ1	HGNC	ENSG00000139151				27	0	0	25	6	19.3548
ABCC9	0	genome.wustl.edu	37	12	22035726	22035726	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	22035726	22035726	C	T	SNP	ABCC9	ENST00000261200	human	ensembl	74_37	-1	known	missense	c.1993	p.A665T	0.000	superfamily_P-loop_NTPase	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2	-	no_errors	ABCC9	HGNC	ENSG00000069431				138	0	0	53	11	17.1875
CACNA1C	0	genome.wustl.edu	37	12	2595422	2595422	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	2595422	2595422	A	G	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	missense	c.910	p.I304V	0.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067				80	0	0	68	27	28.4211
CACNA1C	0	genome.wustl.edu	37	12	2691997	2691997	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	2691997	2691997	G	A	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	missense	c.2113	p.G705R	1.000	pfam_Ion_trans_dom,prints_VDCCAlpha1	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067				39	0	0	18	12	40
FOXM1	0	genome.wustl.edu	37	12	2973571	2973571	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	2973571	2973571	G	A	SNP	FOXM1	ENST00000342628	human	ensembl	74_37	-1	known	missense	c.1181	p.S394L	0.980	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXM1	HGNC	ENSG00000111206				202	0	0	145	41	22.043
DDX11	0	genome.wustl.edu	37	12	31244761	31244761	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	31244761	31244761	G	A	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	missense	c.1198	p.D400N	1.000	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573				177	0	0	119	47	28.3133
TEAD4	0	genome.wustl.edu	37	12	3128327	3128327	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	3128327	3128327	C	T	SNP	TEAD4	ENST00000359864	human	ensembl	74_37	+1	known	missense	c.574	p.P192S	1.000	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD4	HGNC	ENSG00000197905				103	0	0	99	17	14.6552
DENND5B	0	genome.wustl.edu	37	12	31613305	31613305	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	31613305	31613305	G	A	SNP	DENND5B	ENST00000306833	human	ensembl	74_37	-1	known	silent	c.1020	p.R340	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_PLAT/LH2_dom,pfscan_Run	-	no_errors	DENND5B	HGNC	ENSG00000170456				52	0	0	42	10	19.2308
KIF21A	0	genome.wustl.edu	37	12	39716468	39716468	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	39716468	39716468	A	G	SNP	KIF21A	ENST00000395670	human	ensembl	74_37	-1	known	splice_site	c.3671+2	e26+2	1.000	-	-	-	no_errors	KIF21A	HGNC	ENSG00000139116				95	0	0	76	10	11.6279
H1FNT	0	genome.wustl.edu	37	12	48723373	48723373	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	48723373	48723373	C	A	SNP	H1FNT	ENST00000335017	human	ensembl	74_37	+1	known	missense	c.299	p.P100H	0.000	NULL	NULL	-	no_errors	H1FNT	HGNC	ENSG00000187166				55	0	0	23	19	45.2381
ADCY6	0	genome.wustl.edu	37	12	49176859	49176859	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	49176859	49176859	C	T	SNP	ADCY6	ENST00000307885	human	ensembl	74_37	-1	known	missense	c.359	p.R120H	0.120	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY6	HGNC	ENSG00000174233				126	0	0	80	59	42.446
KMT2D	0	genome.wustl.edu	37	12	49421896	49421896	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	49421896	49421896	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.14411	p.A4804V	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				58	0	0	49	36	42.3529
KMT2D	0	genome.wustl.edu	37	12	49427477	49427477	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	49427477	49427477	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.11011	p.P3671S	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				114	0	0	87	26	23.0088
DIP2B	0	genome.wustl.edu	37	12	51125312	51125312	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	51125312	51125312	G	A	SNP	DIP2B	ENST00000301180	human	ensembl	74_37	+1	known	missense	c.3802	p.V1268M	0.997	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2B	HGNC	ENSG00000066084				85	0	0	81	13	13.8298
KRT7	0	genome.wustl.edu	37	12	52629019	52629019	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	52629019	52629019	C	T	SNP	KRT7	ENST00000331817	human	ensembl	74_37	+1	known	silent	c.405	p.S135	0.999	pfam_IF	pfam_IF,superfamily_Prefoldin,superfamily_Chorismate_mutase_type_II,prints_Keratin_II	-	no_errors	KRT7	HGNC	ENSG00000135480				73	0	0	28	23	45.098
KRT81	0	genome.wustl.edu	37	12	52685196	52685196	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	52685196	52685196	G	A	SNP	KRT81	ENST00000327741	human	ensembl	74_37	-1	known	silent	c.54	p.C18	0.996	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT81	HGNC	ENSG00000205426				52	0	0	47	12	20.339
TENC1	0	genome.wustl.edu	37	12	53451887	53451887	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	53451887	53451887	G	A	SNP	TENC1	ENST00000314276	human	ensembl	74_37	+1	known	splice_site	c.1125+1	e14+1	1.000	-	-	-	no_errors	TENC1	HGNC	ENSG00000111077				82	0	0	37	26	41.2698
SPRYD3	0	genome.wustl.edu	37	12	53468510	53468510	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	53468510	53468510	G	A	SNP	SPRYD3	ENST00000301463	human	ensembl	74_37	-1	known	missense	c.430	p.R144W	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	-	no_errors	SPRYD3	HGNC	ENSG00000167778				132	0	0	84	43	33.8583
SPRYD3	0	genome.wustl.edu	37	12	53470944	53470944	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	53470944	53470944	T	C	SNP	SPRYD3	ENST00000301463	human	ensembl	74_37	-1	known	missense	c.125	p.Y42C	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	-	no_errors	SPRYD3	HGNC	ENSG00000167778				108	0	0	81	29	26.3636
CDK2	0	genome.wustl.edu	37	12	56361558	56361558	+	RNA	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	56361558	56361558	C	A	SNP	CDK2	ENST00000556146	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CDK2	HGNC	ENSG00000123374				14	0	0	7	9	56.25
GLS2	0	genome.wustl.edu	37	12	56872956	56872956	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	56872956	56872956	G	A	SNP	GLS2	ENST00000311966	human	ensembl	74_37	-1	known	silent	c.414	p.S138	1.000	NULL	pfam_Glutaminase,pfam_Ankyrin_rpt,superfamily_Beta-lactam/transpept-like,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_Glutaminase	-	no_errors	GLS2	HGNC	ENSG00000135423				62	0	0	64	12	15.7895
LRP1	0	genome.wustl.edu	37	12	57554728	57554728	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	57554728	57554728	C	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.2032	p.R678W	0.528	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				152	0	0	115	23	16.6667
LRP1	0	genome.wustl.edu	37	12	57595682	57595682	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	57595682	57595682	G	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	nonsense	c.10588	p.E3530*	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				162	0	0	130	50	27.7778
VWF	0	genome.wustl.edu	37	12	6128813	6128813	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	6128813	6128813	C	T	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	silent	c.3771	p.L1257	0.000	pirsf_VWF	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				74	0	0	68	18	20.9302
TAPBPL	0	genome.wustl.edu	37	12	6566754	6566754	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	6566754	6566754	C	T	SNP	TAPBPL	ENST00000266556	human	ensembl	74_37	+1	known	missense	c.748	p.R250W	0.127	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_C1-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	TAPBPL	HGNC	ENSG00000139192				70	0	0	56	13	18.8406
NCAPD2	0	genome.wustl.edu	37	12	6634802	6634802	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	6634802	6634802	G	A	SNP	NCAPD2	ENST00000315579	human	ensembl	74_37	+1	known	silent	c.2268	p.L756	0.994	superfamily_ARM-type_fold,pirsf_Condensin_cplx_su1	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_Condensin_cplx_su1	-	no_errors	NCAPD2	HGNC	ENSG00000010292				51	0	0	49	6	10.9091
MLF2	0	genome.wustl.edu	37	12	6861111	6861111	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	6861111	6861111	C	T	SNP	MLF2	ENST00000203630	human	ensembl	74_37	-1	known	missense	c.160	p.A54T	1.000	pfam_Myeloid_leukemia_factor	pfam_Myeloid_leukemia_factor	-	no_errors	MLF2	HGNC	ENSG00000089693				109	0	0	68	41	37.6147
IL22	0	genome.wustl.edu	37	12	68647066	68647066	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	68647066	68647066	G	A	SNP	IL22	ENST00000328087	human	ensembl	74_37	-1	known	missense	c.163	p.R55C	0.999	superfamily_4_helix_cytokine-like_core	superfamily_4_helix_cytokine-like_core,prints_IL-22,prints_IL-24	-	no_errors	IL22	HGNC	ENSG00000127318				86	0	0	65	22	25.2874
PTPRB	0	genome.wustl.edu	37	12	70946688	70946688	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	70946688	70946688	G	A	SNP	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	silent	c.5256	p.A1752	0.024	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329				95	0	0	73	20	21.5054
SLC2A3	0	genome.wustl.edu	37	12	8075523	8075523	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	8075523	8075523	A	G	SNP	SLC2A3	ENST00000075120	human	ensembl	74_37	-1	known	missense	c.1166	p.V389A	1.000	pfam_Sub_transporter,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A3	HGNC	ENSG00000059804				79	0	0	44	10	18.5185
MGAT4C	0	genome.wustl.edu	37	12	86373300	86373300	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	86373300	86373300	G	A	SNP	MGAT4C	ENST00000393205	human	ensembl	74_37	-1	known	nonsense	c.1291	p.Q431*	1.000	NULL	pfam_Glyco_transf_54,superfamily_LSM_dom	-	no_errors	MGAT4C	HGNC	ENSG00000182050				69	0	0	33	26	44.0678
ZIC5	0	genome.wustl.edu	37	13	100617886	100617886	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	100617886	100617886	C	T	SNP	ZIC5	ENST00000267294	human	ensembl	74_37	-1	known	silent	c.1737	p.P579	0.052	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC5	HGNC	ENSG00000139800				207	0	0	125	23	15.5405
ZIC2	0	genome.wustl.edu	37	13	100635354	100635354	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	100635354	100635354	C	T	SNP	ZIC2	ENST00000376335	human	ensembl	74_37	+1	known	missense	c.1036	p.R346C	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC2	HGNC	ENSG00000043355				130	0	0	80	28	25.9259
ITGBL1	0	genome.wustl.edu	37	13	102220101	102220101	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	102220101	102220101	G	T	SNP	ITGBL1	ENST00000376180	human	ensembl	74_37	+1	known	missense	c.368	p.G123V	1.000	pfam_EGF_extracell,smart_EG-like_dom	pfam_EGF_extracell,smart_EG-like_dom	-	no_errors	ITGBL1	HGNC	ENSG00000198542				139	0	0	75	28	27.1845
ITGBL1	0	genome.wustl.edu	37	13	102220102	102220102	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	102220102	102220102	G	T	SNP	ITGBL1	ENST00000376180	human	ensembl	74_37	+1	known	silent	c.369	p.G123	0.959	pfam_EGF_extracell,smart_EG-like_dom	pfam_EGF_extracell,smart_EG-like_dom	-	no_errors	ITGBL1	HGNC	ENSG00000198542				141	0	0	76	28	26.9231
FGF14	0	genome.wustl.edu	37	13	102568809	102568809	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	102568809	102568809	G	A	SNP	FGF14	ENST00000376143	human	ensembl	74_37	-1	known	missense	c.187	p.R63C	1.000	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF14	HGNC	ENSG00000102466				126	1	0.787402	91	30	24.7934
TEX30	0	genome.wustl.edu	37	13	103418901	103418901	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	103418901	103418901	C	T	SNP	TEX30	ENST00000376032	human	ensembl	74_37	-1	known	missense	c.534	p.M178I	1.000	pfam_Dienelactn_hydro	pfam_Dienelactn_hydro	-	no_errors	TEX30	HGNC	ENSG00000151287				51	0	0	27	9	25
MYO16	0	genome.wustl.edu	37	13	109540729	109540729	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	109540729	109540729	G	T	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	missense	c.1497	p.R499S	0.996	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515				92	0	0	48	10	17.2414
COL4A1	0	genome.wustl.edu	37	13	110802779	110802779	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	110802779	110802779	C	T	SNP	COL4A1	ENST00000375820	human	ensembl	74_37	-1	known	silent	c.4941	p.P1647	0.096	pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A1	HGNC	ENSG00000187498				40	0	0	25	9	26.4706
COL4A2	0	genome.wustl.edu	37	13	111118411	111118411	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	111118411	111118411	T	C	SNP	COL4A2	ENST00000360467	human	ensembl	74_37	+1	known	splice_site	c.2038+2	e25+2	0.998	-	-	-	no_errors	COL4A2	HGNC	ENSG00000134871				90	0	0	66	10	13.1579
GRK1	0	genome.wustl.edu	37	13	114322333	114322333	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	114322333	114322333	C	T	SNP	GRK1	ENST00000335678	human	ensembl	74_37	+1	known	missense	c.632	p.A211V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK1	HGNC	ENSG00000185974				29	0	0	18	8	30.7692
GAS6	0	genome.wustl.edu	37	13	114535749	114535749	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	114535749	114535749	G	A	SNP	GAS6	ENST00000357389	human	ensembl	74_37	-1	known	missense	c.940	p.R314W	0.023	superfamily_ConA-like_lec_gl_sf	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	GAS6	HGNC	ENSG00000183087				124	0	0	60	23	27.7108
GAS6	0	genome.wustl.edu	37	13	114538515	114538515	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	114538515	114538515	G	A	SNP	GAS6	ENST00000357389	human	ensembl	74_37	-1	known	missense	c.683	p.A228V	0.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	GAS6	HGNC	ENSG00000183087				155	1	0.641026	82	32	28.0702
CRYL1	0	genome.wustl.edu	37	13	21013765	21013765	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	21013765	21013765	C	A	SNP	CRYL1	ENST00000298248	human	ensembl	74_37	-1	known	missense	c.405	p.L135F	0.256	pfam_3-OHacyl-CoA_DH_NAD-bd	pfam_3-OHacyl-CoA_DH_NAD-bd,pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like	-	no_errors	CRYL1	HGNC	ENSG00000165475				69	0	0	48	15	23.8095
CENPJ	0	genome.wustl.edu	37	13	25457502	25457502	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	25457502	25457502	C	T	SNP	CENPJ	ENST00000381884	human	ensembl	74_37	-1	known	missense	c.3830	p.G1277D	1.000	pfam_Tcp10_C_dom	pfam_Tcp10_C_dom	-	no_errors	CENPJ	HGNC	ENSG00000151849				78	0	0	42	11	20.7547
POLR1D	0	genome.wustl.edu	37	13	28240013	28240013	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	28240013	28240013	C	T	SNP	POLR1D	ENST00000399697	human	ensembl	74_37	+1	novel	nonsense	c.292	p.R98*	0.721	NULL	NULL	-	no_errors	POLR1D	HGNC	ENSG00000186184				106	1	0.934579	73	19	20.6522
FRY	0	genome.wustl.edu	37	13	32808878	32808878	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	32808878	32808878	G	T	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	nonsense	c.5695	p.E1899*	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910				62	0	0	32	10	23.8095
FRY	0	genome.wustl.edu	37	13	32868598	32868598	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	32868598	32868598	G	A	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.8674	p.A2892T	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910				98	0	0	54	17	23.9437
NBEA	0	genome.wustl.edu	37	13	35644128	35644128	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	35644128	35644128	T	C	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	silent	c.1323	p.S441	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				33	0	0	16	9	36
DCLK1	0	genome.wustl.edu	37	13	36445472	36445472	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	36445472	36445472	G	A	SNP	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	nonsense	c.829	p.R277*	1.000	NULL	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083				174	0	0	97	37	27.6119
POSTN	0	genome.wustl.edu	37	13	38166277	38166277	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	38166277	38166277	A	G	SNP	POSTN	ENST00000379747	human	ensembl	74_37	-1	known	silent	c.243	p.P81	0.996	superfamily_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	POSTN	HGNC	ENSG00000133110				41	0	0	19	6	24
AKAP11	0	genome.wustl.edu	37	13	42877077	42877077	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	42877077	42877077	C	T	SNP	AKAP11	ENST00000025301	human	ensembl	74_37	+1	known	missense	c.4195	p.P1399S	0.019	NULL	NULL	-	no_errors	AKAP11	HGNC	ENSG00000023516				55	0	0	40	10	20
ENSG00000269965	0	genome.wustl.edu	37	13	51936200	51936200	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	51936200	51936200	G	A	SNP	ENSG00000269965	ENST00000602881	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-24B19.4	Clone_based_vega_gene	ENSG00000269965				17	0	0	13	6	31.5789
TBC1D4	0	genome.wustl.edu	37	13	75936260	75936260	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	75936260	75936260	C	T	SNP	TBC1D4	ENST00000377636	human	ensembl	74_37	-1	known	missense	c.982	p.E328K	0.990	smart_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111				127	0	0	49	31	38.75
DIO3OS	0	genome.wustl.edu	37	14	102026596	102026596	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	102026596	102026596	G	A	SNP	DIO3OS	ENST00000553729	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.934	-	-	-	no_errors	DIO3OS	HGNC	ENSG00000258498				27	0	0	12	4	25
AMN	0	genome.wustl.edu	37	14	103390133	103390133	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	103390133	103390133	C	T	SNP	AMN	ENST00000299155	human	ensembl	74_37	+1	known	silent	c.129	p.C43	0.897	NULL	NULL	-	no_errors	AMN	HGNC	ENSG00000166126				106	0	0	84	28	25
CEP170B	0	genome.wustl.edu	37	14	105353025	105353025	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	105353025	105353025	G	T	SNP	CEP170B	ENST00000453495	human	ensembl	74_37	+1	known	missense	c.2452	p.G818W	0.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170B	HGNC	ENSG00000099814				72	0	0	38	19	33.3333
JAG2	0	genome.wustl.edu	37	14	105609917	105609917	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	105609917	105609917	G	A	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	missense	c.3143	p.A1048V	1.000	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916				33	0	0	18	12	40
JAG2	0	genome.wustl.edu	37	14	105612201	105612201	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	105612201	105612201	C	T	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	missense	c.2819	p.R940Q	1.000	smart_VWC_out,smart_VWF_C,pfscan_VWF_C	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916				12	0	0	4	2	33.3333
RNASE10	0	genome.wustl.edu	37	14	20979078	20979078	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	20979078	20979078	G	A	SNP	RNASE10	ENST00000328444	human	ensembl	74_37	+1	known	missense	c.448	p.A150T	1.000	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE10	HGNC	ENSG00000182545				73	0	0	41	16	28.0702
RNASE6	0	genome.wustl.edu	37	14	21249933	21249933	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	21249933	21249933	T	C	SNP	RNASE6	ENST00000304677	human	ensembl	74_37	+1	known	silent	c.75	p.P25	0.047	superfamily_RNaseA_domain	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE6	HGNC	ENSG00000169413				75	0	0	45	13	22.4138
OR5AU1	0	genome.wustl.edu	37	14	21623789	21623789	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	21623789	21623789	G	T	SNP	OR5AU1	ENST00000304418	human	ensembl	74_37	-1	known	silent	c.396	p.T132	0.776	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AU1	HGNC	ENSG00000169327				122	0	0	70	22	23.913
MMP14	0	genome.wustl.edu	37	14	23312937	23312937	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	23312937	23312937	C	T	SNP	MMP14	ENST00000311852	human	ensembl	74_37	+1	known	missense	c.869	p.P290L	1.000	pirsf_Pept_M10A_Metazoans	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP14	HGNC	ENSG00000157227				265	0	0	160	51	24.1706
MYH7	0	genome.wustl.edu	37	14	23883076	23883076	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	23883076	23883076	G	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	silent	c.5682	p.S1894	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054				161	0	0	102	39	27.6596
MYH7	0	genome.wustl.edu	37	14	23888767	23888767	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	23888767	23888767	G	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.3778	p.R1260W	0.046	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054				188	0	0	89	50	35.9712
DHRS4	0	genome.wustl.edu	37	14	24424347	24424347	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	24424347	24424347	G	T	SNP	DHRS4	ENST00000313250	human	ensembl	74_37	+1	known	missense	c.232	p.G78W	0.983	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	-	no_errors	DHRS4	HGNC	ENSG00000157326				151	0	0	84	24	22.2222
RABGGTA	0	genome.wustl.edu	37	14	24738901	24738901	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	24738901	24738901	C	T	SNP	RABGGTA	ENST00000216840	human	ensembl	74_37	-1	known	splice_site	c.428-1	e5-1	1.000	-	-	-	no_errors	RABGGTA	HGNC	ENSG00000100949				46	0	0	19	12	38.7097
CMA1	0	genome.wustl.edu	37	14	24976674	24976674	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	24976674	24976674	G	A	SNP	CMA1	ENST00000250378	human	ensembl	74_37	-1	known	missense	c.97	p.R33C	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CMA1	HGNC	ENSG00000092009				210	0	0	105	40	27.5862
GZMH	0	genome.wustl.edu	37	14	25077608	25077608	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	25077608	25077608	G	A	SNP	GZMH	ENST00000216338	human	ensembl	74_37	-1	known	silent	c.66	p.I22	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	GZMH	HGNC	ENSG00000100450				174	1	0.571429	102	28	21.5385
PRKD1	0	genome.wustl.edu	37	14	30068264	30068264	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	30068264	30068264	A	C	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	missense	c.2135	p.V712G	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304				101	0	0	55	21	27.6316
G2E3	0	genome.wustl.edu	37	14	31067763	31067763	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	31067763	31067763	G	T	SNP	G2E3	ENST00000206595	human	ensembl	74_37	+1	known	missense	c.710	p.R237I	1.000	superfamily_Znf_FYVE_PHD	pfam_HECT,superfamily_HECT,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_HECT,pfscan_HECT	-	no_errors	G2E3	HGNC	ENSG00000092140				88	0	0	35	14	28.5714
AKAP6	0	genome.wustl.edu	37	14	33293352	33293352	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	33293352	33293352	G	A	SNP	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	silent	c.6333	p.S2111	0.957	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320				99	0	0	50	19	27.5362
ENSG00000257520	0	genome.wustl.edu	37	14	36942999	36942999	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	36942999	36942999	C	T	SNP	ENSG00000257520	ENST00000521945	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	RP11-896J10.3	Clone_based_vega_gene	ENSG00000257520				11	0	0	6	4	40
ENSG00000259083	0	genome.wustl.edu	37	14	39644471	39644471	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	39644471	39644471	C	T	SNP	ENSG00000259083	ENST00000556537	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	RP11-407N17.4	Clone_based_vega_gene	ENSG00000259083				42	0	0	28	11	28.2051
LRFN5	0	genome.wustl.edu	37	14	42356779	42356779	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	42356779	42356779	A	G	SNP	LRFN5	ENST00000298119	human	ensembl	74_37	+1	known	silent	c.951	p.A317	0.986	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN5	HGNC	ENSG00000165379				107	0	0	74	29	28.1553
NID2	0	genome.wustl.edu	37	14	52507367	52507367	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	52507367	52507367	A	G	SNP	NID2	ENST00000216286	human	ensembl	74_37	-1	known	splice_site	c.2026+2	e8+2	1.000	-	-	-	no_errors	NID2	HGNC	ENSG00000087303				99	0	0	68	19	21.8391
ATG14	0	genome.wustl.edu	37	14	55836376	55836376	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	55836376	55836376	C	T	SNP	ATG14	ENST00000247178	human	ensembl	74_37	-1	known	silent	c.1440	p.S480	0.001	NULL	pfam_UV_resistance/autophagy_Atg14	-	no_errors	ATG14	HGNC	ENSG00000126775				161	0	0	79	35	30.7018
SIX4	0	genome.wustl.edu	37	14	61190676	61190676	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	61190676	61190676	C	A	SNP	SIX4	ENST00000216513	human	ensembl	74_37	-1	known	silent	c.117	p.A39	0.997	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX4	HGNC	ENSG00000100625				100	0	0	45	10	18.1818
SYT16	0	genome.wustl.edu	37	14	62551094	62551094	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	62551094	62551094	C	T	SNP	SYT16	ENST00000430451	human	ensembl	74_37	+1	novel	nonsense	c.1615	p.R539*	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT16	HGNC	ENSG00000139973				58	0	0	19	6	24
SYNE2	0	genome.wustl.edu	37	14	64430701	64430701	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	64430701	64430701	T	C	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.973	p.Y325H	0.992	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				38	0	0	8	13	61.9048
PAPLN	0	genome.wustl.edu	37	14	73720653	73720653	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	73720653	73720653	C	T	SNP	PAPLN	ENST00000427855	human	ensembl	74_37	+1	known	missense	c.1286	p.P429L	0.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Prot_inh_Kunz-m,pfam_PLAC,superfamily_Prot_inh_Kunz-m,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Prot_inh_Kunz-m,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS,prints_Prot_inh_Kunz-m	-	no_errors	PAPLN	HGNC	ENSG00000100767				47	0	0	29	8	21.6216
FAM161B	0	genome.wustl.edu	37	14	74411229	74411229	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	74411229	74411229	A	G	SNP	FAM161B	ENST00000286544	human	ensembl	74_37	-1	known	missense	c.923	p.I308T	0.024	pfam_UPF0564	pfam_UPF0564	-	no_errors	FAM161B	HGNC	ENSG00000156050				86	0	0	50	19	27.5362
YLPM1	0	genome.wustl.edu	37	14	75264709	75264709	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	75264709	75264709	C	T	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	silent	c.2709	p.S903	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596				51	0	0	25	11	30.5556
ADCK1	0	genome.wustl.edu	37	14	78397931	78397931	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	78397931	78397931	G	A	SNP	ADCK1	ENST00000238561	human	ensembl	74_37	+1	known	missense	c.1277	p.R426H	1.000	NULL	pfam_UbiB_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK1	HGNC	ENSG00000063761				70	0	0	40	18	31.0345
FLRT2	0	genome.wustl.edu	37	14	86088481	86088481	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	86088481	86088481	G	A	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	missense	c.623	p.R208H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070				136	0	0	89	26	22.6087
FLRT2	0	genome.wustl.edu	37	14	86089274	86089274	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	86089274	86089274	C	T	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	silent	c.1416	p.S472	0.849	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070				139	0	0	85	27	24.1071
KCNK10	0	genome.wustl.edu	37	14	88652360	88652360	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	88652360	88652360	C	T	SNP	KCNK10	ENST00000312350	human	ensembl	74_37	-1	known	missense	c.1151	p.R384Q	1.000	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_TREK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TRAAK,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK10	HGNC	ENSG00000100433				105	0	0	67	30	30.9278
KCNK10	0	genome.wustl.edu	37	14	88658653	88658653	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	88658653	88658653	C	G	SNP	KCNK10	ENST00000312350	human	ensembl	74_37	-1	known	missense	c.783	p.K261N	0.988	pfam_2pore_dom_K_chnl_dom	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_TREK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TRAAK,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK10	HGNC	ENSG00000100433				206	1	0.483092	126	43	25.4438
BTBD7	0	genome.wustl.edu	37	14	93760390	93760390	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	93760390	93760390	T	C	SNP	BTBD7	ENST00000334746	human	ensembl	74_37	-1	known	missense	c.976	p.T326A	0.999	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD7	HGNC	ENSG00000011114				58	0	0	42	13	23.6364
ALDH1A3	0	genome.wustl.edu	37	15	101433160	101433160	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	101433160	101433160	C	T	SNP	ALDH1A3	ENST00000558033	human	ensembl	74_37	+1	known	missense	c.356	p.S119L	0.353	NULL	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A3	HGNC	ENSG00000184254				91	0	0	63	13	17.1053
LRRK1	0	genome.wustl.edu	37	15	101602777	101602777	+	Splice_Site	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	101602777	101602777	A	C	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	splice_site	c.4798-2	e30-2	1.000	-	-	-	no_errors	LRRK1	HGNC	ENSG00000154237				125	0	0	65	27	29.3478
NPAP1	0	genome.wustl.edu	37	15	24921241	24921241	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	24921241	24921241	G	T	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.227	p.R76L	0.001	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823				72	0	0	42	7	14.2857
SNORD116-6	0	genome.wustl.edu	37	15	25310190	25310190	+	RNA	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	25310190	25310190	T	C	SNP	SNORD116-6	ENST00000384711	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SNORD116-6	HGNC	ENSG00000207442				157	0	0	100	7	6.54206
SNORD116-6	0	genome.wustl.edu	37	15	25310192	25310192	+	RNA	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	25310192	25310192	C	A	SNP	SNORD116-6	ENST00000384711	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SNORD116-6	HGNC	ENSG00000207442				162	0	0	101	7	6.48148
SNHG14	0	genome.wustl.edu	37	15	25438298	25438298	+	RNA	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	25438298	25438298	G	T	SNP	SNHG14	ENST00000414175	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				27	0	0	24	8	25
SNHG14	0	genome.wustl.edu	37	15	25488671	25488671	+	RNA	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	25488671	25488671	C	A	SNP	SNHG14	ENST00000453082	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				107	0	0	65	11	14.4737
OCA2	0	genome.wustl.edu	37	15	28231740	28231740	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	28231740	28231740	G	T	SNP	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	missense	c.1232	p.A411D	1.000	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044				119	0	0	69	18	20.6897
HERC2	0	genome.wustl.edu	37	15	28366498	28366498	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	28366498	28366498	G	A	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.13266	p.R4422	0.079	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				86	0	0	61	16	20.7792
HERC2	0	genome.wustl.edu	37	15	28377925	28377925	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	28377925	28377925	G	A	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.12282	p.V4094	0.998	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				236	0	0	137	36	20.8092
HERC2	0	genome.wustl.edu	37	15	28419605	28419605	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	28419605	28419605	C	T	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.9993	p.T3331	0.014	superfamily_RCC1/BLIP-II	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				57	0	0	33	11	25
HERC2	0	genome.wustl.edu	37	15	28501349	28501349	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	28501349	28501349	C	T	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.2632	p.V878M	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731				58	0	0	25	10	28.5714
HERC2P9	0	genome.wustl.edu	37	15	28901142	28901142	+	RNA	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	28901142	28901142	T	A	SNP	HERC2P9	ENST00000528584	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	HERC2P9	HGNC	ENSG00000206149				28	0	0	13	6	31.5789
TJP1	0	genome.wustl.edu	37	15	29997900	29997900	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	29997900	29997900	C	T	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	missense	c.4900	p.A1634T	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067				85	0	0	54	18	25
TRPM1	0	genome.wustl.edu	37	15	31355443	31355443	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	31355443	31355443	G	A	SNP	TRPM1	ENST00000542188	human	ensembl	74_37	-1	known	silent	c.894	p.N298	0.862	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160				147	0	0	106	29	21.4815
BAHD1	0	genome.wustl.edu	37	15	40754413	40754413	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	40754413	40754413	C	T	SNP	BAHD1	ENST00000416165	human	ensembl	74_37	+1	known	missense	c.1735	p.R579C	1.000	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	BAHD1	HGNC	ENSG00000140320				185	0	0	124	43	25.7485
CHAC1	0	genome.wustl.edu	37	15	41247666	41247666	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	41247666	41247666	C	T	SNP	CHAC1	ENST00000446533	human	ensembl	74_37	+1	known	silent	c.489	p.Y163	0.753	pfam_ChaC	pfam_ChaC	-	no_errors	CHAC1	HGNC	ENSG00000128965				332	0	0	204	56	21.5385
CHAC1	0	genome.wustl.edu	37	15	41247845	41247845	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	41247845	41247845	G	A	SNP	CHAC1	ENST00000446533	human	ensembl	74_37	+1	known	missense	c.668	p.R223H	1.000	pfam_ChaC	pfam_ChaC	-	no_errors	CHAC1	HGNC	ENSG00000128965				141	0	0	78	34	30.3571
INO80	0	genome.wustl.edu	37	15	41276449	41276449	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	41276449	41276449	G	A	SNP	INO80	ENST00000361937	human	ensembl	74_37	-1	known	silent	c.4023	p.D1341	0.953	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	INO80	HGNC	ENSG00000128908				44	0	0	23	4	14.8148
TYRO3	0	genome.wustl.edu	37	15	41864674	41864674	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	41864674	41864674	T	G	SNP	TYRO3	ENST00000263798	human	ensembl	74_37	+1	known	missense	c.1787	p.L596R	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TYRO3	HGNC	ENSG00000092445				188	0	0	99	34	25.5639
TGM5	0	genome.wustl.edu	37	15	43531380	43531380	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	43531380	43531380	T	C	SNP	TGM5	ENST00000220420	human	ensembl	74_37	-1	known	silent	c.1086	p.T362	0.026	smart_Transglutaminase-like	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM5	HGNC	ENSG00000104055				96	0	0	54	18	25
TP53BP1	0	genome.wustl.edu	37	15	43705365	43705365	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	43705365	43705365	G	A	SNP	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	missense	c.5257	p.R1753C	1.000	superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369				69	0	0	52	8	13.3333
FRMD5	0	genome.wustl.edu	37	15	44198148	44198148	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	44198148	44198148	C	T	SNP	FRMD5	ENST00000417257	human	ensembl	74_37	-1	known	silent	c.429	p.A143	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FRMD5	HGNC	ENSG00000171877				55	0	0	40	19	32.2034
SPG11	0	genome.wustl.edu	37	15	44951449	44951449	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	44951449	44951449	T	C	SNP	SPG11	ENST00000261866	human	ensembl	74_37	-1	known	silent	c.495	p.L165	0.022	NULL	NULL	-	no_errors	SPG11	HGNC	ENSG00000104133				60	0	0	41	12	22.6415
USP50	0	genome.wustl.edu	37	15	50836810	50836810	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	50836810	50836810	G	A	SNP	USP50	ENST00000532404	human	ensembl	74_37	-1	known	silent	c.222	p.T74	0.001	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP50	HGNC	ENSG00000170236				32	0	0	24	5	17.2414
CYP19A1	0	genome.wustl.edu	37	15	51514698	51514698	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	51514698	51514698	C	T	SNP	CYP19A1	ENST00000260433	human	ensembl	74_37	-1	known	missense	c.476	p.R159H	0.632	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP19A1	HGNC	ENSG00000137869				53	0	0	26	16	38.0952
GLDN	0	genome.wustl.edu	37	15	51689791	51689791	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	51689791	51689791	C	T	SNP	GLDN	ENST00000335449	human	ensembl	74_37	+1	known	silent	c.813	p.C271	0.973	NULL	pfam_Olfac-like,pfam_Collagen,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	GLDN	HGNC	ENSG00000186417				88	0	0	41	17	29.3103
ENSG00000259577	0	genome.wustl.edu	37	15	52497392	52497392	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	52497392	52497392	G	A	SNP	ENSG00000259577	ENST00000559779	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-430B1.2	Clone_based_vega_gene	ENSG00000259577				60	0	0	34	11	24.4444
MYO5A	0	genome.wustl.edu	37	15	52668596	52668596	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	52668596	52668596	G	A	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	missense	c.2368	p.R790W	1.000	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535				66	0	0	25	14	35.8974
RFX7	0	genome.wustl.edu	37	15	56387073	56387073	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	56387073	56387073	T	C	SNP	RFX7	ENST00000423270	human	ensembl	74_37	-1	known	silent	c.2853	p.T951	0.802	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX7	HGNC	ENSG00000181827				12	0	0	13	5	27.7778
ANXA2	0	genome.wustl.edu	37	15	60641357	60641357	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	60641357	60641357	C	T	SNP	ANXA2	ENST00000332680	human	ensembl	74_37	-1	known	missense	c.931	p.V311I	1.000	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinII,prints_AnnexinV	-	no_errors	ANXA2	HGNC	ENSG00000182718				59	0	0	43	9	17.3077
NARG2	0	genome.wustl.edu	37	15	60741880	60741880	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	60741880	60741880	G	A	SNP	NARG2	ENST00000261520	human	ensembl	74_37	-1	known	missense	c.1286	p.T429I	0.001	NULL	pfam_NARG2_C	-	no_errors	NARG2	HGNC	ENSG00000128915				164	0	0	94	34	26.5625
IGDCC4	0	genome.wustl.edu	37	15	65702608	65702608	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	65702608	65702608	G	A	SNP	IGDCC4	ENST00000352385	human	ensembl	74_37	-1	novel	silent	c.471	p.N157	0.011	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC4	HGNC	ENSG00000103742				82	0	0	58	23	28.3951
SLC24A1	0	genome.wustl.edu	37	15	65916520	65916520	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	65916520	65916520	C	T	SNP	SLC24A1	ENST00000261892	human	ensembl	74_37	+1	known	silent	c.102	p.I34	0.000	tigrfam_K-dep_Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A1	HGNC	ENSG00000074621				110	0	0	66	24	26.6667
MEGF11	0	genome.wustl.edu	37	15	66222091	66222091	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	66222091	66222091	G	A	SNP	MEGF11	ENST00000409699	human	ensembl	74_37	-1	known	silent	c.1539	p.G513	0.999	smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom	pfam_EGF_laminin,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_EMI_domain	-	no_errors	MEGF11	HGNC	ENSG00000157890				10	0	0	6	4	40
DIS3L	0	genome.wustl.edu	37	15	66607510	66607510	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	66607510	66607510	C	T	SNP	DIS3L	ENST00000319212	human	ensembl	74_37	+1	known	silent	c.951	p.D317	0.003	NULL	NULL	-	no_errors	DIS3L	HGNC	ENSG00000166938				124	0	0	54	17	23.9437
DIS3L	0	genome.wustl.edu	37	15	66618407	66618407	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	66618407	66618407	G	T	SNP	DIS3L	ENST00000319212	human	ensembl	74_37	+1	known	missense	c.1906	p.A636S	1.000	NULL	NULL	-	no_errors	DIS3L	HGNC	ENSG00000166938				156	0	0	96	32	25
ITGA11	0	genome.wustl.edu	37	15	68599992	68599992	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	68599992	68599992	G	A	SNP	ITGA11	ENST00000315757	human	ensembl	74_37	-1	known	missense	c.3217	p.R1073W	0.939	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809				30	0	0	24	7	22.5806
CORO2B	0	genome.wustl.edu	37	15	69011069	69011069	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	69011069	69011069	G	A	SNP	CORO2B	ENST00000566799	human	ensembl	74_37	+1	known	missense	c.1000	p.A334T	1.000	pfam_DUF1900	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO2B	HGNC	ENSG00000103647				71	0	0	38	7	15.5556
KIF23	0	genome.wustl.edu	37	15	69728003	69728003	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	69728003	69728003	C	T	SNP	KIF23	ENST00000260363	human	ensembl	74_37	+1	known	nonsense	c.1165	p.R389*	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF23	HGNC	ENSG00000137807				77	0	0	32	9	21.9512
THSD4	0	genome.wustl.edu	37	15	71952908	71952908	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	71952908	71952908	G	A	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.1192	p.V398M	0.624	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720				319	0	0	150	66	30.5556
PML	0	genome.wustl.edu	37	15	74326969	74326969	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	74326969	74326969	G	T	SNP	PML	ENST00000435786	human	ensembl	74_37	+1	known	missense	c.1808	p.R603L	0.000	NULL	pfam_DUF3583,pfam_Znf_B-box,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	PML	HGNC	ENSG00000140464				52	0	0	18	11	37.931
LMAN1L	0	genome.wustl.edu	37	15	75108770	75108770	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	75108770	75108770	C	T	SNP	LMAN1L	ENST00000309664	human	ensembl	74_37	+1	known	silent	c.333	p.A111	0.283	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	-	no_errors	LMAN1L	HGNC	ENSG00000140506				136	0	0	85	36	29.7521
HYKK	0	genome.wustl.edu	37	15	78825552	78825552	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	78825552	78825552	G	A	SNP	HYKK	ENST00000388988	human	ensembl	74_37	+1	known	missense	c.662	p.C221Y	1.000	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	-	no_errors	HYKK	HGNC	ENSG00000188266				39	0	0	17	5	22.7273
KIAA1199	0	genome.wustl.edu	37	15	81218066	81218066	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	81218066	81218066	G	A	SNP	KIAA1199	ENST00000220244	human	ensembl	74_37	+1	known	missense	c.2390	p.R797H	1.000	superfamily_Pectin_lyase_fold/virulence	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888				53	0	0	28	15	34.8837
LOC283693	0	genome.wustl.edu	37	15	83395752	83395752	+	RNA	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	83395752	83395752	A	C	SNP	LOC283693	ENST00000560958	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-752G15.9	Clone_based_vega_gene	ENSG00000259315				19	0	0	15	4	21.0526
ZNF710	0	genome.wustl.edu	37	15	90622982	90622982	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	90622982	90622982	C	T	SNP	ZNF710	ENST00000268154	human	ensembl	74_37	+1	known	missense	c.1916	p.A639V	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF710	HGNC	ENSG00000140548				138	0	0	96	25	20.6612
FES	0	genome.wustl.edu	37	15	91433191	91433191	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	91433191	91433191	C	T	SNP	FES	ENST00000328850	human	ensembl	74_37	+1	known	missense	c.1048	p.R350W	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_FCH_dom,superfamily_Kinase-like_dom,superfamily_t-SNARE,smart_FCH_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH_dom,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	FES	HGNC	ENSG00000182511				80	0	0	62	24	27.907
SV2B	0	genome.wustl.edu	37	15	91769717	91769717	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	91769717	91769717	G	A	SNP	SV2B	ENST00000330276	human	ensembl	74_37	+1	known	missense	c.224	p.R75Q	0.139	tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2B	HGNC	ENSG00000185518				72	0	0	44	16	26.6667
ATF7IP2	0	genome.wustl.edu	37	16	10551245	10551245	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	10551245	10551245	C	T	SNP	ATF7IP2	ENST00000356427	human	ensembl	74_37	+1	known	missense	c.1211	p.A404V	0.003	NULL	superfamily_Fibronectin_type3	-	no_errors	ATF7IP2	HGNC	ENSG00000166669				117	0	0	50	11	18.0328
TEKT5	0	genome.wustl.edu	37	16	10721647	10721647	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	10721647	10721647	G	A	SNP	TEKT5	ENST00000283025	human	ensembl	74_37	-1	known	silent	c.1251	p.N417	0.044	pfam_Tektin,prints_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT5	HGNC	ENSG00000153060				55	0	0	35	11	23.913
SNX29	0	genome.wustl.edu	37	16	12618643	12618643	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	12618643	12618643	G	A	SNP	SNX29	ENST00000306030	human	ensembl	74_37	+1	known	missense	c.1108	p.E370K	1.000	smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX29	HGNC	ENSG00000048471				158	1	0.628931	94	33	25.9843
RRN3	0	genome.wustl.edu	37	16	15178534	15178534	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	15178534	15178534	G	A	SNP	RRN3	ENST00000198767	human	ensembl	74_37	-1	known	silent	c.561	p.H187	1.000	pfam_RNA_pol_I_trans_ini_fac_RRN3,superfamily_ARM-type_fold	pfam_RNA_pol_I_trans_ini_fac_RRN3,superfamily_ARM-type_fold	-	no_errors	RRN3	HGNC	ENSG00000085721				54	0	0	32	6	15.7895
IFT140	0	genome.wustl.edu	37	16	1576692	1576692	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	1576692	1576692	C	T	SNP	IFT140	ENST00000426508	human	ensembl	74_37	-1	known	silent	c.2505	p.A835	0.050	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535				20	0	0	20	11	35.4839
ACSM1	0	genome.wustl.edu	37	16	20673143	20673143	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	20673143	20673143	C	T	SNP	ACSM1	ENST00000307493	human	ensembl	74_37	-1	known	missense	c.965	p.R322Q	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM1	HGNC	ENSG00000166743				69	0	0	31	7	18.4211
PKD1	0	genome.wustl.edu	37	16	2156666	2156666	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	2156666	2156666	G	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.7222	p.R2408C	0.801	pfam_PKD/REJ-like,pfscan_REJ-like,tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				28	0	0	18	10	35.7143
OTOA	0	genome.wustl.edu	37	16	21763714	21763714	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	21763714	21763714	C	A	SNP	OTOA	ENST00000286149	human	ensembl	74_37	+1	known	silent	c.2985	p.T995	0.559	NULL	NULL	-	no_errors	OTOA	HGNC	ENSG00000155719				25	0	0	7	4	36.3636
TRAF7	0	genome.wustl.edu	37	16	2221340	2221340	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	2221340	2221340	G	A	SNP	TRAF7	ENST00000326181	human	ensembl	74_37	+1	known	missense	c.424	p.V142M	0.998	smart_Znf_RING,pfscan_Znf_RING	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_TRAF-like,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_Znf_TRAF,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TRAF7	HGNC	ENSG00000131653				14	0	0	9	2	18.1818
EEF2K	0	genome.wustl.edu	37	16	22274454	22274454	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	22274454	22274454	C	T	SNP	EEF2K	ENST00000263026	human	ensembl	74_37	+1	known	silent	c.1323	p.S441	0.662	pirsf_Elongation_factor_2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC	ENSG00000103319				55	0	0	26	7	21.2121
CASKIN1	0	genome.wustl.edu	37	16	2233682	2233682	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	2233682	2233682	G	T	SNP	CASKIN1	ENST00000343516	human	ensembl	74_37	-1	known	missense	c.1594	p.L532I	1.000	pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN1	HGNC	ENSG00000167971				73	0	0	48	18	27.2727
ECI1	0	genome.wustl.edu	37	16	2293329	2293329	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	2293329	2293329	C	T	SNP	ECI1	ENST00000301729	human	ensembl	74_37	-1	known	missense	c.553	p.A185T	0.995	pfam_Crotonase_core_superfam	pfam_Crotonase_core_superfam	-	no_errors	ECI1	HGNC	ENSG00000167969				172	0	0	120	41	25.4658
GGA2	0	genome.wustl.edu	37	16	23499987	23499987	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	23499987	23499987	T	C	SNP	GGA2	ENST00000309859	human	ensembl	74_37	-1	known	silent	c.519	p.L173	0.878	NULL	pfam_VHS,pfam_GAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ENTH_VHS,superfamily_Coatomer/clathrin_app_Ig-like,smart_VHS_subgr,smart_Clathrin_a/b/g-adaptin_app_Ig,pfscan_Clathrin_g-adaptin_app,pfscan_GAT,pfscan_VHS	-	no_errors	GGA2	HGNC	ENSG00000103365				145	1	0.684932	90	13	12.6214
ABCA3	0	genome.wustl.edu	37	16	2374467	2374467	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	2374467	2374467	C	T	SNP	ABCA3	ENST00000301732	human	ensembl	74_37	-1	known	missense	c.385	p.V129M	0.890	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA3	HGNC	ENSG00000167972				43	0	0	12	11	47.8261
APOBR	0	genome.wustl.edu	37	16	28506688	28506688	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	28506688	28506688	A	G	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	missense	c.326	p.H109R	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730				9	0	0	4	5	55.5556
IL27	0	genome.wustl.edu	37	16	28515226	28515226	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	28515226	28515226	G	A	SNP	IL27	ENST00000356897	human	ensembl	74_37	-1	known	silent	c.177	p.S59	0.250	superfamily_4_helix_cytokine-like_core	superfamily_4_helix_cytokine-like_core	-	no_errors	IL27	HGNC	ENSG00000197272				102	0	0	44	18	29.0323
PRSS21	0	genome.wustl.edu	37	16	2868703	2868703	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	2868703	2868703	G	T	SNP	PRSS21	ENST00000005995	human	ensembl	74_37	+1	known	missense	c.283	p.G95W	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS21	HGNC	ENSG00000007038				115	0	0	61	22	26.506
EIF3C	0	genome.wustl.edu	37	16	28734621	28734621	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	28734621	28734621	C	T	SNP	EIF3C	ENST00000331666	human	ensembl	74_37	+1	known	missense	c.913	p.R305W	0.996	pfam_EIF3C_N_dom	pfam_EIF3C_N_dom,pfam_PCI_dom,smart_PCI_dom	-	no_errors	EIF3C	HGNC	ENSG00000184110				714	1	0.13986	503	72	12.5217
ATP2A1	0	genome.wustl.edu	37	16	28911961	28911961	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	28911961	28911961	G	A	SNP	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	silent	c.1824	p.T608	0.003	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296				117	0	0	70	14	16.6667
MAZ	0	genome.wustl.edu	37	16	29821441	29821441	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	29821441	29821441	G	T	SNP	MAZ	ENST00000563402	human	ensembl	74_37	+1	novel	missense	c.292	p.G98C	0.234	NULL	NULL	-	no_errors	MAZ	HGNC	ENSG00000103495				71	0	0	43	15	25.8621
SEPT1	0	genome.wustl.edu	37	16	30392536	30392536	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	30392536	30392536	C	A	SNP	SEPT1	ENST00000321367	human	ensembl	74_37	-1	known	missense	c.611	p.R204L	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT1	HGNC	ENSG00000180096				121	0	0	76	23	23.2323
SRCAP	0	genome.wustl.edu	37	16	30723028	30723028	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	30723028	30723028	G	A	SNP	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	silent	c.1455	p.A485	0.242	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603				175	0	0	86	34	28.3333
FBXL19	0	genome.wustl.edu	37	16	30958185	30958185	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	30958185	30958185	G	A	SNP	FBXL19	ENST00000380310	human	ensembl	74_37	+1	known	missense	c.1822	p.A608T	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Znf_CXXC,pfam_F-box_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	FBXL19	HGNC	ENSG00000099364				29	0	0	29	10	25.641
MMP25	0	genome.wustl.edu	37	16	3097522	3097522	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	3097522	3097522	C	T	SNP	MMP25	ENST00000336577	human	ensembl	74_37	+1	known	missense	c.206	p.A69V	0.924	pirsf_Pept_M10A_Metazoans,pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP25	HGNC	ENSG00000008516				146	0	0	96	34	26.1538
PRSS53	0	genome.wustl.edu	37	16	31096300	31096300	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	31096300	31096300	C	T	SNP	PRSS53	ENST00000280606	human	ensembl	74_37	-1	known	silent	c.1080	p.P360	0.004	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS53	HGNC	ENSG00000151006				17	0	0	9	4	30.7692
ITGAM	0	genome.wustl.edu	37	16	31332935	31332935	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	31332935	31332935	T	C	SNP	ITGAM	ENST00000544665	human	ensembl	74_37	+1	known	silent	c.1992	p.D664	0.146	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896				128	0	0	74	23	23.7113
ZNF174	0	genome.wustl.edu	37	16	3458560	3458560	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	3458560	3458560	C	A	SNP	ZNF174	ENST00000268655	human	ensembl	74_37	+1	known	missense	c.865	p.L289I	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF174	HGNC	ENSG00000103343				165	0	0	71	17	19.3182
ZNF597	0	genome.wustl.edu	37	16	3486537	3486537	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	3486537	3486537	G	A	SNP	ZNF597	ENST00000301744	human	ensembl	74_37	-1	known	nonsense	c.1162	p.Q388*	0.763	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF597	HGNC	ENSG00000167981				28	0	0	25	5	16.6667
DNASE1	0	genome.wustl.edu	37	16	3707055	3707055	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	3707055	3707055	C	T	SNP	DNASE1	ENST00000246949	human	ensembl	74_37	+1	known	silent	c.492	p.A164	0.002	pirsf_DNase_I,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I,prints_DNase_I	pirsf_DNase_I,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I,prints_DNase_I	-	no_errors	DNASE1	HGNC	ENSG00000213918				73	0	0	40	8	16.6667
CREBBP	0	genome.wustl.edu	37	16	3808953	3808953	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	3808953	3808953	G	A	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	missense	c.3271	p.R1091C	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339				87	0	0	55	13	19.1176
VASN	0	genome.wustl.edu	37	16	4431239	4431239	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	4431239	4431239	C	T	SNP	VASN	ENST00000304735	human	ensembl	74_37	+1	known	missense	c.361	p.R121C	0.995	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	VASN	HGNC	ENSG00000168140				40	0	0	27	6	18.1818
PHKB	0	genome.wustl.edu	37	16	47730354	47730354	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	47730354	47730354	G	A	SNP	PHKB	ENST00000299167	human	ensembl	74_37	+1	known	silent	c.2958	p.T986	0.781	NULL	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKB	HGNC	ENSG00000102893				76	0	0	35	7	16.6667
SEPT12	0	genome.wustl.edu	37	16	4837628	4837628	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	4837628	4837628	A	G	SNP	SEPT12	ENST00000268231	human	ensembl	74_37	-1	known	missense	c.19	p.S7P	0.003	NULL	pfam_Cell_div_GTP-bd,pfam_AIG1,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT12	HGNC	ENSG00000140623				33	0	0	21	5	19.2308
N4BP1	0	genome.wustl.edu	37	16	48595821	48595821	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	48595821	48595821	A	G	SNP	N4BP1	ENST00000262384	human	ensembl	74_37	-1	known	missense	c.733	p.S245P	1.000	NULL	pfam_RNase_Zc3h12	-	no_errors	N4BP1	HGNC	ENSG00000102921				44	0	0	31	6	16.2162
ZNF423	0	genome.wustl.edu	37	16	49671871	49671871	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	49671871	49671871	G	A	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	missense	c.1192	p.R398W	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935				92	0	0	46	15	24.5902
C16orf89	0	genome.wustl.edu	37	16	5106074	5106074	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	5106074	5106074	C	T	SNP	C16orf89	ENST00000350219	human	ensembl	74_37	-1	known	missense	c.857	p.R286Q	0.867	NULL	NULL	-	no_errors	C16orf89	HGNC	ENSG00000153446				76	0	0	59	19	24.359
SALL1	0	genome.wustl.edu	37	16	51185147	51185147	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	51185147	51185147	C	T	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	silent	c.6	p.S2	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449				26	0	0	9	7	43.75
IRX6	0	genome.wustl.edu	37	16	55362834	55362834	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	55362834	55362834	G	A	SNP	IRX6	ENST00000290552	human	ensembl	74_37	+1	known	missense	c.944	p.R315H	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX6	HGNC	ENSG00000159387				112	0	0	68	34	33.3333
CCDC135	0	genome.wustl.edu	37	16	57756637	57756637	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	57756637	57756637	G	A	SNP	CCDC135	ENST00000360716	human	ensembl	74_37	+1	known	missense	c.1292	p.R431H	1.000	NULL	NULL	-	no_errors	CCDC135	HGNC	ENSG00000159625				121	1	0.819672	67	24	26.3736
CNGB1	0	genome.wustl.edu	37	16	57931400	57931400	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	57931400	57931400	G	A	SNP	CNGB1	ENST00000251102	human	ensembl	74_37	-1	known	missense	c.3143	p.A1048V	0.999	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB1	HGNC	ENSG00000070729				56	0	0	39	20	33.8983
PRSS54	0	genome.wustl.edu	37	16	58319950	58319950	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	58319950	58319950	G	A	SNP	PRSS54	ENST00000219301	human	ensembl	74_37	-1	known	missense	c.413	p.A138V	0.006	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	-	no_errors	PRSS54	HGNC	ENSG00000103023				195	0	0	102	42	29.1667
ZDHHC1	0	genome.wustl.edu	37	16	67433331	67433331	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	67433331	67433331	A	G	SNP	ZDHHC1	ENST00000348579	human	ensembl	74_37	-1	known	missense	c.457	p.C153R	1.000	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC1	HGNC	ENSG00000159714				88	0	0	63	17	21.25
CENPT	0	genome.wustl.edu	37	16	67866249	67866249	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	67866249	67866249	T	C	SNP	CENPT	ENST00000565713	human	ensembl	74_37	-1	known	missense	c.206	p.D69G	0.830	NULL	NULL	-	no_errors	CENPT	HGNC	ENSG00000102901				47	0	0	32	17	34.6939
FUK	0	genome.wustl.edu	37	16	70500827	70500827	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	70500827	70500827	G	A	SNP	FUK	ENST00000378912	human	ensembl	74_37	+1	known	missense	c.550	p.D184N	1.000	pfam_Fucokinase	pfam_Fucokinase,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Trimer_LpxA-like,prints_Galkinase	-	no_errors	FUK	HGNC	ENSG00000157353				78	0	0	51	22	30.137
HYDIN	0	genome.wustl.edu	37	16	70977741	70977741	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	70977741	70977741	C	T	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.6643	p.V2215M	0.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				56	0	0	44	10	18.5185
MARVELD3	0	genome.wustl.edu	37	16	71668550	71668550	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	71668550	71668550	C	T	SNP	MARVELD3	ENST00000268485	human	ensembl	74_37	+1	known	silent	c.1050	p.S350	0.019	NULL	NULL	-	no_errors	MARVELD3	HGNC	ENSG00000140832				81	0	0	38	17	30.9091
AP1G1	0	genome.wustl.edu	37	16	71779114	71779114	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	71779114	71779114	C	T	SNP	AP1G1	ENST00000433195	human	ensembl	74_37	-1	known	silent	c.2001	p.A667	1.000	pirsf_AP1_complex_gsu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP1_complex_gsu,pfscan_Clathrin_g-adaptin_app	-	no_errors	AP1G1	HGNC	ENSG00000166747				64	0	0	38	11	22.449
HPR	0	genome.wustl.edu	37	16	72110691	72110691	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	72110691	72110691	C	T	SNP	HPR	ENST00000228226	human	ensembl	74_37	+1	known	missense	c.869	p.T290M	0.000	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	HPR	HGNC	ENSG00000261701				126	0	0	66	20	23.2558
PMFBP1	0	genome.wustl.edu	37	16	72174448	72174448	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	72174448	72174448	G	A	SNP	PMFBP1	ENST00000537465	human	ensembl	74_37	-1	known	missense	c.670	p.R224W	0.618	NULL	NULL	-	no_errors	PMFBP1	HGNC	ENSG00000118557				146	0	0	79	22	21.7822
ENSG00000259972	0	genome.wustl.edu	37	16	74366508	74366508	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	74366508	74366508	G	A	SNP	ENSG00000259972	ENST00000565313	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	AC009120.6	Clone_based_vega_gene	ENSG00000259972				45	0	0	24	3	11.1111
FA2H	0	genome.wustl.edu	37	16	74750315	74750315	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	74750315	74750315	C	T	SNP	FA2H	ENST00000219368	human	ensembl	74_37	-1	known	silent	c.969	p.P323	0.031	pfam_Fatty_acid_hydroxylase,pirsf_Ino-phos-ceramide-B_Hydrxlase	pfam_Fatty_acid_hydroxylase,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Ino-phos-ceramide-B_Hydrxlase,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	FA2H	HGNC	ENSG00000103089				56	0	0	40	13	24.5283
CHST5	0	genome.wustl.edu	37	16	75563591	75563591	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	75563591	75563591	C	T	SNP	CHST5	ENST00000541075	human	ensembl	74_37	-1	known	missense	c.710	p.R237H	0.912	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST5	HGNC	ENSG00000135702				131	0	0	79	30	27.5229
CHST5	0	genome.wustl.edu	37	16	75563611	75563611	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	75563611	75563611	G	A	SNP	CHST5	ENST00000541075	human	ensembl	74_37	-1	known	silent	c.690	p.R230	0.875	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST5	HGNC	ENSG00000135702				142	1	0.699301	87	26	23.0088
BCMO1	0	genome.wustl.edu	37	16	81320986	81320986	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	81320986	81320986	G	A	SNP	BCMO1	ENST00000258168	human	ensembl	74_37	+1	known	silent	c.1389	p.A463	0.000	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	BCMO1	HGNC	ENSG00000135697				88	0	0	46	21	31.3433
PLCG2	0	genome.wustl.edu	37	16	81946265	81946265	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	81946265	81946265	C	T	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	silent	c.1998	p.D666	0.951	pfam_SH2,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_SH2,pirsf_PLC-gamma,pfscan_SH2,prints_SH2	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943				42	0	0	25	7	21.875
MSLNL	0	genome.wustl.edu	37	16	830214	830214	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	830214	830214	C	T	SNP	MSLNL	ENST00000293892	human	ensembl	74_37	-1	known	missense	c.787	p.D263N	0.001	NULL	pfam_Mesothelin	-	no_errors	MSLNL	HGNC	ENSG00000162006				35	0	0	25	15	37.5
HSDL1	0	genome.wustl.edu	37	16	84163848	84163848	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	84163848	84163848	G	A	SNP	HSDL1	ENST00000219439	human	ensembl	74_37	-1	known	nonsense	c.409	p.R137*	0.585	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSDL1	HGNC	ENSG00000103160				167	0	0	103	42	28.9655
CHTF18	0	genome.wustl.edu	37	16	842344	842344	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	842344	842344	C	T	SNP	CHTF18	ENST00000317063	human	ensembl	74_37	+1	known	silent	c.1908	p.P636	0.880	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	CHTF18	HGNC	ENSG00000127586				13	0	0	10	3	23.0769
KCNG4	0	genome.wustl.edu	37	16	84270841	84270841	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	84270841	84270841	C	T	SNP	KCNG4	ENST00000308251	human	ensembl	74_37	-1	known	missense	c.251	p.R84H	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,prints_K_chnl_volt-dep_Kv9	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG4	HGNC	ENSG00000168418				121	0	0	78	21	21.2121
WFDC1	0	genome.wustl.edu	37	16	84353123	84353123	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	84353123	84353123	G	A	SNP	WFDC1	ENST00000219454	human	ensembl	74_37	+1	known	missense	c.508	p.V170M	0.042	NULL	pfam_WAP-type_4-diS_core,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core	-	no_errors	WFDC1	HGNC	ENSG00000103175				80	0	0	59	16	21.3333
GSE1	0	genome.wustl.edu	37	16	85688440	85688440	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	85688440	85688440	G	A	SNP	GSE1	ENST00000253458	human	ensembl	74_37	+1	known	missense	c.640	p.V214M	0.998	NULL	pfam_GSE-like	-	no_errors	GSE1	HGNC	ENSG00000131149				51	0	0	42	5	10.6383
FBXO31	0	genome.wustl.edu	37	16	87393948	87393948	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	87393948	87393948	C	T	SNP	FBXO31	ENST00000311635	human	ensembl	74_37	-1	known	missense	c.365	p.R122Q	1.000	superfamily_F-box_dom	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO31	HGNC	ENSG00000103264				53	0	0	36	16	30.7692
CDT1	0	genome.wustl.edu	37	16	88871863	88871863	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	88871863	88871863	C	T	SNP	CDT1	ENST00000301019	human	ensembl	74_37	+1	known	silent	c.504	p.P168	0.015	NULL	pfam_CDT1_Gemini-bd-like	-	no_errors	CDT1	HGNC	ENSG00000167513				92	0	0	73	16	17.9775
DPEP1	0	genome.wustl.edu	37	16	89704614	89704614	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	89704614	89704614	G	A	SNP	DPEP1	ENST00000261615	human	ensembl	74_37	+1	known	missense	c.1220	p.C407Y	0.001	NULL	pfam_Peptidase_M19	-	no_errors	DPEP1	HGNC	ENSG00000015413				69	0	0	34	19	35.8491
FANCA	0	genome.wustl.edu	37	16	89849416	89849416	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	89849416	89849416	T	C	SNP	FANCA	ENST00000389301	human	ensembl	74_37	-1	known	missense	c.1565	p.K522R	1.000	NULL	pfam_Fanconia,prints_Fanconia	-	no_errors	FANCA	HGNC	ENSG00000187741				44	0	0	31	9	22.5
TCF25	0	genome.wustl.edu	37	16	89949906	89949906	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	89949906	89949906	G	T	SNP	TCF25	ENST00000263346	human	ensembl	74_37	+1	known	missense	c.340	p.V114L	0.000	NULL	pfam_TCF25	-	no_errors	TCF25	HGNC	ENSG00000141002				27	0	0	12	3	20
FAM157C	0	genome.wustl.edu	37	16	90168700	90168700	+	RNA	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	90168700	90168700	A	G	SNP	FAM157C	ENST00000563357	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	FAM157C	HGNC	ENSG00000260528				11	0	0	6	3	33.3333
MYH4	0	genome.wustl.edu	37	17	10362628	10362628	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	10362628	10362628	G	A	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	silent	c.1527	p.I509	0.997	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424				205	1	0.485437	119	33	21.7105
MYH2	0	genome.wustl.edu	37	17	10440997	10440997	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	10440997	10440997	G	A	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.1572	p.I524	0.519	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414				224	0	0	124	49	28.3237
DNAH9	0	genome.wustl.edu	37	17	11656223	11656223	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	11656223	11656223	C	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	silent	c.6684	p.G2228	0.050	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				89	0	0	39	17	30.3571
HS3ST3A1	0	genome.wustl.edu	37	17	13400018	13400018	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	13400018	13400018	G	A	SNP	HS3ST3A1	ENST00000284110	human	ensembl	74_37	-1	known	silent	c.717	p.I239	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST3A1	HGNC	ENSG00000153976				203	0	0	168	23	12.0419
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				85	0	0	56	4	6.66667
NCOR1	0	genome.wustl.edu	37	17	16024412	16024412	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	16024412	16024412	C	T	SNP	NCOR1	ENST00000268712	human	ensembl	74_37	-1	known	silent	c.1806	p.A602	0.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027				144	0	0	89	31	25.8333
TRPV2	0	genome.wustl.edu	37	17	16326906	16326906	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	16326906	16326906	A	G	SNP	TRPV2	ENST00000338560	human	ensembl	74_37	+1	known	missense	c.749	p.H250R	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	-	no_errors	TRPV2	HGNC	ENSG00000187688				80	0	0	53	17	24.2857
SREBF1	0	genome.wustl.edu	37	17	17723585	17723585	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	17723585	17723585	G	A	SNP	SREBF1	ENST00000355815	human	ensembl	74_37	-1	known	silent	c.432	p.P144	0.149	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SREBF1	HGNC	ENSG00000072310				128	0	0	67	31	31.6327
MYO15A	0	genome.wustl.edu	37	17	18022705	18022705	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	18022705	18022705	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	silent	c.591	p.Y197	0.295	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				79	0	0	35	18	33.9623
FBXW10	0	genome.wustl.edu	37	17	18670082	18670082	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	18670082	18670082	C	A	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	silent	c.1698	p.I566	0.992	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931				56	0	0	21	6	22.2222
SLC5A10	0	genome.wustl.edu	37	17	18872443	18872443	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	18872443	18872443	G	T	SNP	SLC5A10	ENST00000395647	human	ensembl	74_37	+1	known	missense	c.532	p.G178C	0.148	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A10	HGNC	ENSG00000154025				89	0	0	54	17	23.9437
UBBP4	0	genome.wustl.edu	37	17	21730847	21730847	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	21730847	21730847	G	T	SNP	UBBP4	ENST00000578713	human	ensembl	74_37	+1	putative	missense	c.149	p.R50L	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBBP4	HGNC	ENSG00000263563				65	0	0	51	5	8.92857
SRR	0	genome.wustl.edu	37	17	2226993	2226993	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	2226993	2226993	A	G	SNP	SRR	ENST00000344595	human	ensembl	74_37	+1	known	silent	c.849	p.E283	1.000	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	-	no_errors	SRR	HGNC	ENSG00000167720				74	0	0	34	18	34.6154
CLUH	0	genome.wustl.edu	37	17	2601302	2601302	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	2601302	2601302	C	T	SNP	CLUH	ENST00000435359	human	ensembl	74_37	-1	known	missense	c.1735	p.V579M	0.999	NULL	superfamily_GSKIP_dom	-	no_errors	CLUH	HGNC	ENSG00000132361				19	0	0	17	10	37.037
SUPT6H	0	genome.wustl.edu	37	17	27008369	27008369	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	27008369	27008369	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.1445	p.A482V	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				98	0	0	52	19	26.7606
NEK8	0	genome.wustl.edu	37	17	27068452	27068452	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	27068452	27068452	G	A	SNP	NEK8	ENST00000268766	human	ensembl	74_37	+1	known	missense	c.1913	p.G638D	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	pfam_Prot_kinase_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_RCC1/BLIP-II,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_dom,prints_Reg_chr_condens,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK8	HGNC	ENSG00000160602				46	0	0	28	9	24.3243
ANKRD13B	0	genome.wustl.edu	37	17	27937743	27937743	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	27937743	27937743	G	A	SNP	ANKRD13B	ENST00000394859	human	ensembl	74_37	+1	known	missense	c.863	p.R288Q	1.000	pfam_ANKRD13	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ubiquitin-int_motif,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif	-	no_errors	ANKRD13B	HGNC	ENSG00000198720				69	0	0	32	18	36
PSMD11	0	genome.wustl.edu	37	17	30796128	30796128	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	30796128	30796128	G	A	SNP	PSMD11	ENST00000261712	human	ensembl	74_37	+1	known	missense	c.560	p.R187Q	1.000	smart_PAM	pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	PSMD11	HGNC	ENSG00000108671				55	0	0	37	14	27.451
ENSG00000224113	0	genome.wustl.edu	37	17	33332763	33332763	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	33332763	33332763	C	T	SNP	ENSG00000224113	ENST00000415412	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.899	-	-	-	no_errors	RP5-837J1.2	Clone_based_vega_gene	ENSG00000224113				43	0	0	20	12	37.5
AP2B1	0	genome.wustl.edu	37	17	33977595	33977595	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	33977595	33977595	G	A	SNP	AP2B1	ENST00000312678	human	ensembl	74_37	+1	known	missense	c.1583	p.R528H	0.838	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,pfam_HEAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Armadillo,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP2B1	HGNC	ENSG00000006125				146	0	0	67	26	27.957
TRPV1	0	genome.wustl.edu	37	17	3494642	3494642	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	3494642	3494642	A	G	SNP	TRPV1	ENST00000399756	human	ensembl	74_37	-1	known	missense	c.290	p.L97P	0.015	tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	-	no_errors	TRPV1	HGNC	ENSG00000196689				84	0	0	36	12	25
ITGAE	0	genome.wustl.edu	37	17	3620083	3620083	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	3620083	3620083	C	T	SNP	ITGAE	ENST00000263087	human	ensembl	74_37	-1	known	missense	c.3343	p.V1115I	0.990	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_VWF_A,smart_Int_alpha_beta-p,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAE	HGNC	ENSG00000083457				110	0	0	64	16	20
CWC25	0	genome.wustl.edu	37	17	36962649	36962649	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	36962649	36962649	C	T	SNP	CWC25	ENST00000225428	human	ensembl	74_37	-1	known	splice_site	c.903-1	e8-1	1.000	-	-	-	no_errors	CWC25	HGNC	ENSG00000108296				22	0	0	8	7	46.6667
KRTAP4-4	0	genome.wustl.edu	37	17	39316818	39316818	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	39316818	39316818	C	T	SNP	KRTAP4-4	ENST00000390661	human	ensembl	74_37	-1	known	silent	c.126	p.V42	0.087	NULL	NULL	-	no_errors	KRTAP4-4	HGNC	ENSG00000171396				207	0	0	112	51	31.2883
ACLY	0	genome.wustl.edu	37	17	40065856	40065856	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	40065856	40065856	T	G	SNP	ACLY	ENST00000352035	human	ensembl	74_37	-1	known	missense	c.443	p.K148T	1.000	pfam_ATP-grasp_succ-CoA_synth-type,pirsf_ATP-citrate_synthase	pfam_Citrate_synthase-like,pfam_CoA_ligase,pfam_CoA-bd,pfam_ATP-grasp_succ-CoA_synth-type,superfamily_Citrate_synthase-like_core,superfamily_Succinyl-CoA_synth-like,smart_CoA-bd,pirsf_ATP-citrate_synthase	-	no_errors	ACLY	HGNC	ENSG00000131473				98	0	0	58	11	15.942
MLX	0	genome.wustl.edu	37	17	40720502	40720502	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	40720502	40720502	A	T	SNP	MLX	ENST00000246912	human	ensembl	74_37	+1	known	missense	c.256	p.S86C	0.968	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MLX	HGNC	ENSG00000108788				277	0	0	170	68	28.5714
MPP3	0	genome.wustl.edu	37	17	41898340	41898340	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	41898340	41898340	C	T	SNP	MPP3	ENST00000398389	human	ensembl	74_37	-1	known	silent	c.771	p.R257	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_PDZ,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP3	HGNC	ENSG00000161647				51	0	0	29	7	19.4444
SLC4A1	0	genome.wustl.edu	37	17	42335477	42335477	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	42335477	42335477	G	A	SNP	SLC4A1	ENST00000262418	human	ensembl	74_37	-1	known	missense	c.1159	p.R387W	0.003	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_1,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A1	HGNC	ENSG00000004939				173	1	0.574713	91	34	27.2
GPATCH8	0	genome.wustl.edu	37	17	42476612	42476612	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	42476612	42476612	G	A	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	nonsense	c.2833	p.R945*	1.000	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				100	1	0.990099	77	27	25.9615
GPATCH8	0	genome.wustl.edu	37	17	42477897	42477897	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	42477897	42477897	G	T	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	silent	c.1548	p.T516	0.000	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				87	0	0	47	19	28.7879
NMT1	0	genome.wustl.edu	37	17	43181224	43181224	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	43181224	43181224	G	A	SNP	NMT1	ENST00000258960	human	ensembl	74_37	+1	known	missense	c.1312	p.A438T	1.000	pfam_MyristoylCoA_TrFase_C,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	pfam_MyristoylCoA_TrFase_C,pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	-	no_errors	NMT1	HGNC	ENSG00000136448				312	0	0	186	61	24.6964
CDC27	0	genome.wustl.edu	37	17	45234397	45234397	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	45234397	45234397	G	A	SNP	CDC27	ENST00000531206	human	ensembl	74_37	-1	known	missense	c.724	p.P242S	1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CDC27	HGNC	ENSG00000004897				64	0	0	39	6	13.3333
OSBPL7	0	genome.wustl.edu	37	17	45894054	45894054	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	45894054	45894054	C	T	SNP	OSBPL7	ENST00000007414	human	ensembl	74_37	-1	known	missense	c.803	p.R268H	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL7	HGNC	ENSG00000006025				86	0	0	34	9	20.9302
ZMYND15	0	genome.wustl.edu	37	17	4645308	4645308	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	4645308	4645308	G	A	SNP	ZMYND15	ENST00000433935	human	ensembl	74_37	+1	known	missense	c.926	p.R309H	0.995	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND15	HGNC	ENSG00000141497				177	0	0	97	27	21.7742
CHAD	0	genome.wustl.edu	37	17	48543170	48543170	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	48543170	48543170	C	T	SNP	CHAD	ENST00000258969	human	ensembl	74_37	-1	known	missense	c.836	p.R279H	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	CHAD	HGNC	ENSG00000136457				222	1	0.44843	154	39	20.2073
CHAD	0	genome.wustl.edu	37	17	48545679	48545679	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	48545679	48545679	C	T	SNP	CHAD	ENST00000258969	human	ensembl	74_37	-1	known	missense	c.496	p.A166T	0.991	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	CHAD	HGNC	ENSG00000136457				128	0	0	82	30	26.7857
CAMTA2	0	genome.wustl.edu	37	17	4885437	4885437	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	4885437	4885437	C	T	SNP	CAMTA2	ENST00000414043	human	ensembl	74_37	-1	known	missense	c.427	p.V143I	1.000	pfam_CG-1_dom	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA2	HGNC	ENSG00000108509				180	0	0	98	32	24.6154
WFIKKN2	0	genome.wustl.edu	37	17	48917804	48917804	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	48917804	48917804	G	A	SNP	WFIKKN2	ENST00000311378	human	ensembl	74_37	+1	known	silent	c.1155	p.A385	0.003	pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Netrin_module_non-TIMP,pfam_WAP-type_4-diS_core,pfam_Kazal_dom,pfam_Ig_V-set,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN2	HGNC	ENSG00000173714				117	0	0	73	25	25.5102
RPAIN	0	genome.wustl.edu	37	17	5331587	5331587	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	5331587	5331587	T	C	SNP	RPAIN	ENST00000405578	human	ensembl	74_37	+1	known	missense	c.686	p.F229S	0.083	NULL	NULL	-	no_errors	RPAIN	HGNC	ENSG00000129197				36	0	0	14	9	39.1304
ENSG00000262112	0	genome.wustl.edu	37	17	54969032	54969032	+	RNA	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	54969032	54969032	G	T	SNP	ENSG00000262112	ENST00000574826	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-670E13.5	Clone_based_vega_gene	ENSG00000262112				40	0	0	26	14	35
TEX14	0	genome.wustl.edu	37	17	56676886	56676886	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	56676886	56676886	G	A	SNP	TEX14	ENST00000240361	human	ensembl	74_37	-1	known	missense	c.1838	p.A613V	0.007	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	TEX14	HGNC	ENSG00000121101				97	0	0	62	18	22.5
PPM1E	0	genome.wustl.edu	37	17	57049544	57049544	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	57049544	57049544	C	T	SNP	PPM1E	ENST00000308249	human	ensembl	74_37	+1	known	silent	c.1024	p.L342	1.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1E	HGNC	ENSG00000175175				90	0	0	53	18	25.3521
HEATR6	0	genome.wustl.edu	37	17	58134441	58134441	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	58134441	58134441	C	T	SNP	HEATR6	ENST00000184956	human	ensembl	74_37	-1	known	missense	c.2047	p.E683K	0.998	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR6	HGNC	ENSG00000068097				127	0	0	70	18	20.4545
HEATR6	0	genome.wustl.edu	37	17	58150607	58150607	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	58150607	58150607	A	C	SNP	HEATR6	ENST00000184956	human	ensembl	74_37	-1	known	missense	c.502	p.L168V	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR6	HGNC	ENSG00000068097				82	0	0	41	16	28.0702
MRC2	0	genome.wustl.edu	37	17	60743868	60743868	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	60743868	60743868	C	T	SNP	MRC2	ENST00000303375	human	ensembl	74_37	+1	known	silent	c.747	p.Y249	1.000	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC2	HGNC	ENSG00000011028				59	0	0	40	10	20
MAP3K3	0	genome.wustl.edu	37	17	61770954	61770954	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	61770954	61770954	G	A	SNP	MAP3K3	ENST00000361357	human	ensembl	74_37	+1	known	silent	c.1791	p.P597	0.255	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K3	HGNC	ENSG00000198909				174	0	0	117	30	20.4082
STRADA	0	genome.wustl.edu	37	17	61804044	61804044	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	61804044	61804044	C	T	SNP	STRADA	ENST00000336174	human	ensembl	74_37	-1	known	silent	c.48	p.S16	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STRADA	HGNC	ENSG00000266173				73	0	0	46	30	39.4737
PSMC5	0	genome.wustl.edu	37	17	61907507	61907507	+	Silent	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	61907507	61907507	T	A	SNP	PSMC5	ENST00000310144	human	ensembl	74_37	+1	known	silent	c.279	p.G93	0.997	tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_AAA-2,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC5	HGNC	ENSG00000087191				65	0	0	45	17	27.4194
GH2	0	genome.wustl.edu	37	17	61958243	61958243	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	61958243	61958243	G	A	SNP	GH2	ENST00000332800	human	ensembl	74_37	-1	known	silent	c.345	p.P115	0.848	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	GH2	HGNC	ENSG00000136487				126	1	0.787402	86	34	28.3333
GNA13	0	genome.wustl.edu	37	17	63052529	63052529	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	63052529	63052529	C	G	SNP	GNA13	ENST00000439174	human	ensembl	74_37	-1	known	missense	c.183	p.K61N	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_12	-	no_errors	GNA13	HGNC	ENSG00000120063				215	0	0	130	36	21.6867
CACNG1	0	genome.wustl.edu	37	17	65052301	65052301	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	65052301	65052301	G	A	SNP	CACNG1	ENST00000226021	human	ensembl	74_37	+1	known	missense	c.583	p.G195S	0.011	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_g1su,prints_VDCC_gsu	-	no_errors	CACNG1	HGNC	ENSG00000108878				112	0	0	60	24	28.5714
HELZ	0	genome.wustl.edu	37	17	65074496	65074496	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	65074496	65074496	G	A	SNP	HELZ	ENST00000358691	human	ensembl	74_37	-1	known	missense	c.5701	p.R1901W	1.000	NULL	pfam_Znf_CCCH,superfamily_P-loop_NTPase,smart_Znf_CCCH	-	no_errors	HELZ	HGNC	ENSG00000198265				170	0	0	84	27	24.3243
RNMTL1	0	genome.wustl.edu	37	17	691291	691291	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	691291	691291	A	C	SNP	RNMTL1	ENST00000304478	human	ensembl	74_37	+1	known	missense	c.646	p.N216H	1.000	pfam_SpoU_MeTrfase	pfam_SpoU_MeTrfase,pfam_SpoU_subst-bd,smart_SpoU_subst-bd	-	no_errors	RNMTL1	HGNC	ENSG00000171861				191	0	0	119	41	25.625
ALOX12	0	genome.wustl.edu	37	17	6913317	6913317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	6913317	6913317	C	T	SNP	ALOX12	ENST00000251535	human	ensembl	74_37	+1	known	missense	c.1684	p.R562W	1.000	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C	-	no_errors	ALOX12	HGNC	ENSG00000108839				100	0	0	56	16	22.2222
C17orf49	0	genome.wustl.edu	37	17	6920605	6920605	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	6920605	6920605	A	G	SNP	C17orf49	ENST00000546495	human	ensembl	74_37	+1	known	missense	c.544	p.M182V	0.999	NULL	superfamily_Homeodomain-like	-	no_errors	C17orf49	HGNC	ENSG00000258315				145	0	0	76	24	24
SLC39A11	0	genome.wustl.edu	37	17	71084796	71084796	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	71084796	71084796	C	T	SNP	SLC39A11	ENST00000542342	human	ensembl	74_37	-1	known	silent	c.108	p.Q36	1.000	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A11	HGNC	ENSG00000133195				26	0	0	21	9	30
SDK2	0	genome.wustl.edu	37	17	71382019	71382019	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	71382019	71382019	G	T	SNP	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	silent	c.4536	p.P1512	0.815	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188				19	0	0	20	2	9.09091
SDK2	0	genome.wustl.edu	37	17	71391336	71391336	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	71391336	71391336	C	T	SNP	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	missense	c.3550	p.G1184R	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188				25	0	0	12	5	29.4118
SDK2	0	genome.wustl.edu	37	17	71394314	71394314	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	71394314	71394314	G	A	SNP	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	missense	c.3214	p.R1072C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188				81	0	0	52	19	26.7606
EIF5A	0	genome.wustl.edu	37	17	7214736	7214736	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	7214736	7214736	G	A	SNP	EIF5A	ENST00000336452	human	ensembl	74_37	+1	known	missense	c.428	p.R143H	1.000	pfam_Transl_elong_IF5A_C,superfamily_NA-bd_OB-fold,pirsf_Transl_elong_IF5A,tigrfam_Transl_elong_IF5A	pfam_Transl_elong_IF5A_C,pfam_KOW,superfamily_Translation_prot_SH3-like,superfamily_NA-bd_OB-fold,pirsf_Transl_elong_IF5A,tigrfam_Transl_elong_IF5A	-	no_errors	EIF5A	HGNC	ENSG00000132507				134	0	0	84	27	24.3243
ACAP1	0	genome.wustl.edu	37	17	7250404	7250404	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	7250404	7250404	G	A	SNP	ACAP1	ENST00000158762	human	ensembl	74_37	+1	known	missense	c.1186	p.A396T	0.007	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP1	HGNC	ENSG00000072818				66	0	0	33	9	21.4286
SLC35G6	0	genome.wustl.edu	37	17	7386191	7386191	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	7386191	7386191	G	A	SNP	SLC35G6	ENST00000412468	human	ensembl	74_37	+1	known	silent	c.888	p.L296	1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35G6	HGNC	ENSG00000259224				306	0	0	194	50	20.4918
MRPL38	0	genome.wustl.edu	37	17	73895602	73895602	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	73895602	73895602	T	C	SNP	MRPL38	ENST00000309352	human	ensembl	74_37	-1	known	silent	c.864	p.S288	0.000	superfamily_PtdEtn-bd_prot_PEBP	pfam_PtdEtn-bd_prot_PEBP,superfamily_PtdEtn-bd_prot_PEBP	-	no_errors	MRPL38	HGNC	ENSG00000204316				37	0	0	20	6	23.0769
EVPL	0	genome.wustl.edu	37	17	74018100	74018100	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	74018100	74018100	A	C	SNP	EVPL	ENST00000301607	human	ensembl	74_37	-1	known	missense	c.655	p.S219A	0.998	NULL	pfam_Plectin_repeat,superfamily_Ferritin-like_SF,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880				16	0	0	8	4	33.3333
QRICH2	0	genome.wustl.edu	37	17	74277016	74277016	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	74277016	74277016	G	A	SNP	QRICH2	ENST00000262765	human	ensembl	74_37	-1	known	missense	c.3784	p.R1262C	0.726	NULL	NULL	-	no_errors	QRICH2	HGNC	ENSG00000129646				82	0	0	39	23	37.0968
UBE2O	0	genome.wustl.edu	37	17	74395734	74395734	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	74395734	74395734	G	A	SNP	UBE2O	ENST00000319380	human	ensembl	74_37	-1	known	missense	c.1424	p.S475L	0.976	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931				107	0	0	57	29	33.7209
FXR2	0	genome.wustl.edu	37	17	7495831	7495831	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	7495831	7495831	G	A	SNP	FXR2	ENST00000250113	human	ensembl	74_37	-1	known	missense	c.1816	p.R606C	1.000	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR2	HGNC	ENSG00000129245				306	0	0	216	66	23.4043
TP53	0	genome.wustl.edu	37	17	7579473	7579473	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	7579473	7579473	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.214	p.P72S	0.010	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				279	0	0	195	75	27.7778
AFMID	0	genome.wustl.edu	37	17	76202066	76202066	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	76202066	76202066	C	T	SNP	AFMID	ENST00000327898	human	ensembl	74_37	+1	known	missense	c.835	p.L279F	0.000	NULL	pfam_AB_hydrolase_3	-	no_errors	AFMID	HGNC	ENSG00000183077				67	0	0	30	14	31.8182
C1QTNF1	0	genome.wustl.edu	37	17	77043779	77043779	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	77043779	77043779	G	A	SNP	C1QTNF1	ENST00000354124	human	ensembl	74_37	+1	known	missense	c.485	p.R162Q	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF1	HGNC	ENSG00000173918				130	0	0	78	33	29.7297
TMEM88	0	genome.wustl.edu	37	17	7758474	7758474	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	7758474	7758474	G	A	SNP	TMEM88	ENST00000301599	human	ensembl	74_37	+1	known	missense	c.82	p.A28T	1.000	NULL	NULL	-	no_errors	TMEM88	HGNC	ENSG00000167874				31	0	0	18	3	14.2857
ENPP7	0	genome.wustl.edu	37	17	77709291	77709291	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	77709291	77709291	C	T	SNP	ENPP7	ENST00000328313	human	ensembl	74_37	+1	known	silent	c.849	p.N283	0.042	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP7	HGNC	ENSG00000182156				121	1	0.819672	74	14	15.9091
CBX2	0	genome.wustl.edu	37	17	77755617	77755617	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	77755617	77755617	G	T	SNP	CBX2	ENST00000269399	human	ensembl	74_37	+1	known	missense	c.305	p.G102V	0.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX2	HGNC	ENSG00000173894				119	0	0	58	18	23.6842
CBX4	0	genome.wustl.edu	37	17	77807930	77807930	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	77807930	77807930	G	A	SNP	CBX4	ENST00000269397	human	ensembl	74_37	-1	known	missense	c.1511	p.A504V	0.039	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,prints_Chromo_dom_subgr,pfscan_Chromo_domain/shadow	-	no_errors	CBX4	HGNC	ENSG00000141582				125	0	0	64	22	25.5814
CHD3	0	genome.wustl.edu	37	17	7814252	7814252	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	7814252	7814252	G	A	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.5842	p.A1948T	1.000	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				221	0	0	140	49	25.9259
RNF213	0	genome.wustl.edu	37	17	78272299	78272299	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	78272299	78272299	C	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.2191	p.R731W	0.654	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821				69	0	0	37	11	22.9167
RPTOR	0	genome.wustl.edu	37	17	78933961	78933961	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	78933961	78933961	C	T	SNP	RPTOR	ENST00000306801	human	ensembl	74_37	+1	known	silent	c.3561	p.D1187	0.841	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Raptor	pfam_HEAT,pfam_WD40_repeat,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Raptor	-	no_errors	RPTOR	HGNC	ENSG00000141564				69	0	0	57	19	25
MFSD6L	0	genome.wustl.edu	37	17	8701011	8701011	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	8701011	8701011	C	A	SNP	MFSD6L	ENST00000329805	human	ensembl	74_37	-1	known	silent	c.1428	p.G476	0.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD6L	HGNC	ENSG00000185156				99	0	0	55	21	27.6316
ABR	0	genome.wustl.edu	37	17	961263	961263	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	961263	961263	G	A	SNP	ABR	ENST00000302538	human	ensembl	74_37	-1	known	missense	c.1328	p.S443L	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	ABR	HGNC	ENSG00000159842				49	0	0	23	11	32.3529
CXADRP3	0	genome.wustl.edu	37	18	14479228	14479228	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	14479228	14479228	G	A	SNP	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.468	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766				40	0	0	8	4	33.3333
POTEC	0	genome.wustl.edu	37	18	14524922	14524922	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	14524922	14524922	C	A	SNP	POTEC	ENST00000358970	human	ensembl	74_37	-1	known	missense	c.1187	p.S396I	0.043	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEC	HGNC	ENSG00000183206				45	0	0	25	11	30.5556
SNRPD1	0	genome.wustl.edu	37	18	19203788	19203788	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	19203788	19203788	G	A	SNP	SNRPD1	ENST00000300413	human	ensembl	74_37	+1	known	silent	c.171	p.T57	0.979	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	-	no_errors	SNRPD1	HGNC	ENSG00000167088				68	0	0	61	13	17.5676
OSBPL1A	0	genome.wustl.edu	37	18	21759789	21759789	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	21759789	21759789	G	A	SNP	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	missense	c.1823	p.A608V	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447				50	0	0	38	15	28.3019
HRH4	0	genome.wustl.edu	37	18	22057515	22057515	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	22057515	22057515	G	T	SNP	HRH4	ENST00000256906	human	ensembl	74_37	+1	known	missense	c.1162	p.V388L	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H4_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HRH4	HGNC	ENSG00000134489				48	0	0	28	4	12.5
DSC1	0	genome.wustl.edu	37	18	28710616	28710616	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	28710616	28710616	G	A	SNP	DSC1	ENST00000257198	human	ensembl	74_37	-1	known	missense	c.2546	p.S849L	0.427	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_pro_dom,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin/Desmocollin,prints_Cadherin,prints_Desmosomal_cadherin	-	no_errors	DSC1	HGNC	ENSG00000134765				119	0	0	76	27	26.2136
ZNF271	0	genome.wustl.edu	37	18	32886947	32886947	+	RNA	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	32886947	32886947	T	C	SNP	ZNF271	ENST00000399070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.096	-	-	-	no_errors	ZNF271	HGNC	ENSG00000257267				54	0	0	35	12	25.5319
ZBTB7C	0	genome.wustl.edu	37	18	45555955	45555955	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	45555955	45555955	G	A	SNP	ZBTB7C	ENST00000332053	human	ensembl	74_37	-1	known	silent	c.1536	p.G512	0.982	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7C	HGNC	ENSG00000184828				15	0	0	8	5	38.4615
MAPK4	0	genome.wustl.edu	37	18	48256038	48256038	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	48256038	48256038	G	A	SNP	MAPK4	ENST00000400384	human	ensembl	74_37	+1	known	silent	c.1578	p.P526	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK3/4	-	no_errors	MAPK4	HGNC	ENSG00000141639				13	0	0	2	3	60
EPB41L3	0	genome.wustl.edu	37	18	5397388	5397388	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	5397388	5397388	G	A	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	missense	c.2510	p.T837M	0.017	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397				99	0	0	58	10	14.7059
WDR7	0	genome.wustl.edu	37	18	54591218	54591218	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	54591218	54591218	C	T	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	nonsense	c.3592	p.R1198*	1.000	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157				84	0	0	42	14	25
ATP8B1	0	genome.wustl.edu	37	18	55315862	55315862	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	55315862	55315862	C	T	SNP	ATP8B1	ENST00000283684	human	ensembl	74_37	-1	known	missense	c.3614	p.R1205Q	0.918	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B1	HGNC	ENSG00000081923				26	0	0	20	7	25.9259
NEDD4L	0	genome.wustl.edu	37	18	55996250	55996250	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	55996250	55996250	A	T	SNP	NEDD4L	ENST00000400345	human	ensembl	74_37	+1	known	missense	c.704	p.N235I	0.868	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom,prints_C2_dom	-	no_errors	NEDD4L	HGNC	ENSG00000049759				77	0	0	46	20	30.303
ALPK2	0	genome.wustl.edu	37	18	56171214	56171214	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	56171214	56171214	G	A	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	missense	c.6196	p.H2066Y	1.000	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796				158	0	0	111	45	28.8462
CDH20	0	genome.wustl.edu	37	18	59221536	59221536	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	59221536	59221536	G	A	SNP	CDH20	ENST00000262717	human	ensembl	74_37	+1	known	missense	c.2014	p.E672K	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542				215	0	0	153	58	27.4882
ENOSF1	0	genome.wustl.edu	37	18	674307	674307	+	Nonstop_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	674307	674307	A	G	SNP	ENOSF1	ENST00000340116	human	ensembl	74_37	-1	known	nonstop	c.1351	p.*451Q	0.957	NULL	pfam_Mandelate_racemase_C,pfam_Mandelate_racemase_N,smart_Mandelate_racemase_C	-	no_errors	ENOSF1	HGNC	ENSG00000132199				295	0	0	180	56	23.7288
DOK6	0	genome.wustl.edu	37	18	67508532	67508532	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	67508532	67508532	C	T	SNP	DOK6	ENST00000382713	human	ensembl	74_37	+1	known	silent	c.909	p.Y303	0.001	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK6	HGNC	ENSG00000206052				172	0	0	121	39	24.375
CYB5A	0	genome.wustl.edu	37	18	71959089	71959089	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	71959089	71959089	C	T	SNP	CYB5A	ENST00000340533	human	ensembl	74_37	-1	known	missense	c.22	p.A8T	0.000	superfamily_Cyt_B5-like_heme/steroid-bd	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	CYB5A	HGNC	ENSG00000166347				265	0	0	146	68	31.7757
TSHZ1	0	genome.wustl.edu	37	18	72997590	72997590	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	72997590	72997590	G	A	SNP	TSHZ1	ENST00000580243	human	ensembl	74_37	+1	known	silent	c.228	p.S76	0.994	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ1	HGNC	ENSG00000179981				50	0	0	30	14	31.8182
SALL3	0	genome.wustl.edu	37	18	76753554	76753554	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	76753554	76753554	C	T	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	silent	c.1563	p.T521	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				22	0	0	20	5	20
NFATC1	0	genome.wustl.edu	37	18	77193582	77193582	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	77193582	77193582	G	A	SNP	NFATC1	ENST00000590313	human	ensembl	74_37	+1	known	missense	c.92	p.R31Q	0.304	NULL	NULL	-	no_errors	NFATC1	HGNC	ENSG00000131196				239	0	0	165	45	21.4286
SOGA2	0	genome.wustl.edu	37	18	8784560	8784560	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	8784560	8784560	C	A	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.1450	p.L484M	0.986	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				214	0	0	133	54	28.877
COL5A3	0	genome.wustl.edu	37	19	10097273	10097273	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	10097273	10097273	C	T	SNP	COL5A3	ENST00000264828	human	ensembl	74_37	-1	known	missense	c.2200	p.G734S	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC	ENSG00000080573				173	0	0	99	30	23.2558
COL5A3	0	genome.wustl.edu	37	19	10100194	10100194	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	10100194	10100194	G	A	SNP	COL5A3	ENST00000264828	human	ensembl	74_37	-1	known	missense	c.1997	p.P666L	0.758	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC	ENSG00000080573				44	0	0	21	10	32.2581
KRI1	0	genome.wustl.edu	37	19	10668280	10668280	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	10668280	10668280	C	T	SNP	KRI1	ENST00000312962	human	ensembl	74_37	-1	known	missense	c.1583	p.R528H	1.000	pfam_KRR1-interact_protein_1	pfam_KRR1-interact_protein_1	-	no_errors	KRI1	HGNC	ENSG00000129347				112	0	0	65	15	18.75
HMHA1	0	genome.wustl.edu	37	19	1073980	1073980	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	1073980	1073980	G	T	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	missense	c.757	p.G253C	0.924	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448				16	0	0	16	3	15.7895
CARM1	0	genome.wustl.edu	37	19	11024578	11024578	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	11024578	11024578	C	T	SNP	CARM1	ENST00000327064	human	ensembl	74_37	+1	known	missense	c.695	p.T232M	0.908	pfam_Arg_MeTrfase,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom,pfam_mo5U34_MeTrfas-like,pfam_Methyltransf_11	pfam_Histone-Arg_MeTrfase_N,pfam_Arg_MeTrfase,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom,pfam_mo5U34_MeTrfas-like,pfam_Methyltransf_11	-	no_errors	CARM1	HGNC	ENSG00000142453				79	0	0	33	13	28.2609
SMARCA4	0	genome.wustl.edu	37	19	11135020	11135020	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	11135020	11135020	T	G	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.2987	p.I996S	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				67	0	0	43	10	18.8679
LDLR	0	genome.wustl.edu	37	19	11241983	11241983	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	11241983	11241983	C	T	SNP	LDLR	ENST00000557933	human	ensembl	74_37	+1	novel	missense	c.2636	p.T879M	0.001	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LDLR	HGNC	ENSG00000130164				199	0	0	109	44	28.7582
DOCK6	0	genome.wustl.edu	37	19	11356356	11356356	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	11356356	11356356	C	T	SNP	DOCK6	ENST00000294618	human	ensembl	74_37	-1	known	silent	c.906	p.S302	0.844	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N	-	no_errors	DOCK6	HGNC	ENSG00000130158				42	0	0	15	8	34.7826
ZNF700	0	genome.wustl.edu	37	19	12060510	12060510	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	12060510	12060510	T	C	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	silent	c.1671	p.T557	0.166	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757				106	0	0	49	16	24.6154
ZNF844	0	genome.wustl.edu	37	19	12187275	12187275	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	12187275	12187275	G	C	SNP	ZNF844	ENST00000439326	human	ensembl	74_37	+1	known	missense	c.1340	p.R447P	0.047	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF844	HGNC	ENSG00000223547				81	0	0	66	4	5.71429
ZNF442	0	genome.wustl.edu	37	19	12461306	12461306	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	12461306	12461306	G	A	SNP	ZNF442	ENST00000242804	human	ensembl	74_37	-1	known	nonsense	c.1093	p.Q365*	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF442	HGNC	ENSG00000198342				250	0	0	153	50	24.6305
C19orf24	0	genome.wustl.edu	37	19	1279017	1279017	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	1279017	1279017	C	T	SNP	C19orf24	ENST00000469144	human	ensembl	74_37	+1	putative	nonsense	c.208	p.R70*	0.000	NULL	NULL	-	no_errors	C19orf24	HGNC	ENSG00000228300				128	0	0	80	22	21.5686
HOOK2	0	genome.wustl.edu	37	19	12883473	12883473	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	12883473	12883473	G	A	SNP	HOOK2	ENST00000397668	human	ensembl	74_37	-1	known	missense	c.410	p.T137M	0.859	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_UBA-like	-	no_errors	HOOK2	HGNC	ENSG00000095066				279	0	0	154	55	26.3158
CALR	0	genome.wustl.edu	37	19	13051174	13051174	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	13051174	13051174	C	T	SNP	CALR	ENST00000316448	human	ensembl	74_37	+1	known	missense	c.610	p.P204S	1.000	pirsf_Calreticulin,pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf	pirsf_Calreticulin,pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf,prints_Calret/calnex	-	no_errors	CALR	HGNC	ENSG00000179218				107	0	0	52	14	21.2121
LPHN1	0	genome.wustl.edu	37	19	14269310	14269310	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	14269310	14269310	G	A	SNP	LPHN1	ENST00000340736	human	ensembl	74_37	-1	known	missense	c.2219	p.T740M	1.000	pfam_DUF3497	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071				84	0	0	58	20	25.641
APC2	0	genome.wustl.edu	37	19	1466991	1466991	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	1466991	1466991	C	A	SNP	APC2	ENST00000233607	human	ensembl	74_37	+1	known	missense	c.3691	p.L1231M	0.999	NULL	pfam_APC_basic_dom,pfam_APC_dom,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo	-	no_errors	APC2	HGNC	ENSG00000115266				30	0	0	10	6	37.5
PCSK4	0	genome.wustl.edu	37	19	1483747	1483747	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	1483747	1483747	G	A	SNP	PCSK4	ENST00000588195	human	ensembl	74_37	-1	known	missense	c.1279	p.R427W	0.958	NULL	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,superfamily_Prot_inh_propept	-	no_errors	PCSK4	HGNC	ENSG00000115257				30	0	0	18	8	30.7692
SLC1A6	0	genome.wustl.edu	37	19	15065082	15065082	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	15065082	15065082	C	T	SNP	SLC1A6	ENST00000221742	human	ensembl	74_37	-1	known	missense	c.1229	p.R410H	1.000	pfam_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A6	HGNC	ENSG00000105143				121	0	0	87	29	25
SYDE1	0	genome.wustl.edu	37	19	15224566	15224566	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	15224566	15224566	G	A	SNP	SYDE1	ENST00000342784	human	ensembl	74_37	+1	known	missense	c.2000	p.R667Q	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE1	HGNC	ENSG00000105137				220	0	0	153	54	26.087
MEX3D	0	genome.wustl.edu	37	19	1556587	1556587	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	1556587	1556587	C	T	SNP	MEX3D	ENST00000388824	human	ensembl	74_37	-1	known	missense	c.931	p.G311R	0.993	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3D	HGNC	ENSG00000181588				54	0	0	32	15	31.9149
CPAMD8	0	genome.wustl.edu	37	19	17013616	17013616	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	17013616	17013616	C	T	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.4669	p.V1557I	0.993	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				235	0	0	141	59	29.5
CPAMD8	0	genome.wustl.edu	37	19	17091392	17091392	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	17091392	17091392	C	T	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	silent	c.1641	p.Q547	1.000	pfam_A2M_N_2	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				130	0	0	79	35	30.7018
B3GNT3	0	genome.wustl.edu	37	19	17922436	17922436	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	17922436	17922436	C	T	SNP	B3GNT3	ENST00000318683	human	ensembl	74_37	+1	known	silent	c.624	p.N208	0.993	pfam_Glyco_trans_31	pfam_Glyco_trans_31	-	no_errors	B3GNT3	HGNC	ENSG00000179913				86	0	0	44	21	32.3077
KIAA1683	0	genome.wustl.edu	37	19	18376825	18376825	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	18376825	18376825	G	A	SNP	KIAA1683	ENST00000392413	human	ensembl	74_37	-1	known	missense	c.1525	p.R509C	0.059	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC	ENSG00000130518				127	1	0.78125	94	32	25.3968
CERS1	0	genome.wustl.edu	37	19	19004284	19004284	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	19004284	19004284	G	A	SNP	CERS1	ENST00000427170	human	ensembl	74_37	-1	known	missense	c.350	p.A117V	0.988	pfam_TLC-dom,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom	pfam_TLC-dom,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom	-	no_errors	CERS1	HGNC	ENSG00000223802				31	0	0	13	3	18.75
COPE	0	genome.wustl.edu	37	19	19010503	19010503	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	19010503	19010503	G	A	SNP	COPE	ENST00000262812	human	ensembl	74_37	-1	known	silent	c.912	p.Y304	0.994	pfam_Coatomer_esu,pirsf_Coatomer_esu	pfam_Coatomer_esu,pirsf_Coatomer_esu	-	no_errors	COPE	HGNC	ENSG00000105669				70	0	0	41	12	22.6415
SUGP1	0	genome.wustl.edu	37	19	19414844	19414844	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	19414844	19414844	T	C	SNP	SUGP1	ENST00000334782	human	ensembl	74_37	-1	known	missense	c.547	p.T183A	0.000	NULL	NULL	-	no_errors	SUGP1	HGNC	ENSG00000105705				244	0	0	158	55	25.8216
BTBD2	0	genome.wustl.edu	37	19	1993114	1993114	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	1993114	1993114	C	A	SNP	BTBD2	ENST00000255608	human	ensembl	74_37	-1	known	missense	c.589	p.A197S	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD2	HGNC	ENSG00000133243				40	0	0	34	11	24.4444
ZNF85	0	genome.wustl.edu	37	19	21132748	21132748	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	21132748	21132748	T	C	SNP	ZNF85	ENST00000328178	human	ensembl	74_37	+1	known	silent	c.1428	p.H476	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF85	HGNC	ENSG00000105750				34	0	0	27	10	27.027
ZNF676	0	genome.wustl.edu	37	19	22363776	22363776	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	22363776	22363776	G	A	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.743	p.T248I	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				118	0	0	69	15	17.8571
LOC440518	0	genome.wustl.edu	37	19	22780152	22780152	+	RNA	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	22780152	22780152	T	C	SNP	LOC440518	ENST00000597408	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.553	-	-	-	no_errors	CTC-457E21.3	Clone_based_vega_gene	ENSG00000269332				60	0	0	44	17	27.8689
ZNF554	0	genome.wustl.edu	37	19	2833974	2833974	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	2833974	2833974	C	T	SNP	ZNF554	ENST00000317243	human	ensembl	74_37	+1	known	silent	c.741	p.S247	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF554	HGNC	ENSG00000172006				129	0	0	65	24	26.9663
ZNF77	0	genome.wustl.edu	37	19	2934023	2934023	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	2934023	2934023	G	A	SNP	ZNF77	ENST00000314531	human	ensembl	74_37	-1	known	nonsense	c.1102	p.R368*	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF77	HGNC	ENSG00000175691				82	0	0	48	18	27.2727
URI1	0	genome.wustl.edu	37	19	30500253	30500253	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	30500253	30500253	C	A	SNP	URI1	ENST00000542441	human	ensembl	74_37	+1	known	missense	c.1028	p.P343H	1.000	NULL	pfam_Prefoldin_subunit_alpha,superfamily_Prefoldin	-	no_errors	URI1	HGNC	ENSG00000105176				45	0	0	29	3	9.375
SLC7A9	0	genome.wustl.edu	37	19	33353056	33353056	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	33353056	33353056	C	T	SNP	SLC7A9	ENST00000023064	human	ensembl	74_37	-1	known	silent	c.672	p.A224	0.227	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A9	HGNC	ENSG00000021488				164	0	0	106	42	28.3784
SLC7A9	0	genome.wustl.edu	37	19	33353080	33353080	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	33353080	33353080	C	T	SNP	SLC7A9	ENST00000023064	human	ensembl	74_37	-1	known	silent	c.648	p.L216	0.002	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A9	HGNC	ENSG00000021488				154	0	0	99	26	20.8
WDR88	0	genome.wustl.edu	37	19	33623249	33623249	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	33623249	33623249	C	T	SNP	WDR88	ENST00000355868	human	ensembl	74_37	+1	known	silent	c.174	p.L58	0.000	NULL	pfam_WD40_repeat,pfam_PQQ_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_PQQ_beta_propeller_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR88	HGNC	ENSG00000166359				212	0	0	126	36	22.2222
FZR1	0	genome.wustl.edu	37	19	3527008	3527008	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	3527008	3527008	G	A	SNP	FZR1	ENST00000395095	human	ensembl	74_37	+1	known	missense	c.418	p.D140N	0.972	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FZR1	HGNC	ENSG00000105325				163	1	0.609756	98	39	28.4672
MAG	0	genome.wustl.edu	37	19	35786581	35786581	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	35786581	35786581	G	A	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	missense	c.112	p.V38I	1.000	smart_Ig_sub	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695				131	0	0	82	27	24.7706
ATP4A	0	genome.wustl.edu	37	19	36046612	36046612	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	36046612	36046612	G	A	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	missense	c.1972	p.R658C	0.999	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675				261	0	0	145	58	28.5714
KIRREL2	0	genome.wustl.edu	37	19	36351526	36351526	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	36351526	36351526	C	T	SNP	KIRREL2	ENST00000360202	human	ensembl	74_37	+1	known	silent	c.885	p.N295	0.995	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL2	HGNC	ENSG00000126259				213	0	0	107	37	25.6944
ZNF829	0	genome.wustl.edu	37	19	37382942	37382942	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	37382942	37382942	A	G	SNP	ZNF829	ENST00000520965	human	ensembl	74_37	-1	known	missense	c.994	p.Y332H	0.171	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF829	HGNC	ENSG00000185869				45	0	0	26	11	29.7297
ZFP30	0	genome.wustl.edu	37	19	38126828	38126828	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	38126828	38126828	T	C	SNP	ZFP30	ENST00000351218	human	ensembl	74_37	-1	known	missense	c.614	p.Q205R	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP30	HGNC	ENSG00000120784				119	0	0	57	23	28.75
ZNF607	0	genome.wustl.edu	37	19	38190427	38190427	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	38190427	38190427	C	T	SNP	ZNF607	ENST00000355202	human	ensembl	74_37	-1	known	missense	c.605	p.C202Y	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF607	HGNC	ENSG00000198182				118	0	0	76	20	20.8333
SPRED3	0	genome.wustl.edu	37	19	38885084	38885084	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	38885084	38885084	G	A	SNP	SPRED3	ENST00000587564	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	SPRED3	HGNC	ENSG00000188766				55	0	0	34	12	26.087
ENSG00000269688	0	genome.wustl.edu	37	19	39336106	39336106	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	39336106	39336106	C	T	SNP	ENSG00000269688	ENST00000600473	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC008982.2	Clone_based_vega_gene	ENSG00000269688				14	0	0	5	5	50
EEF2	0	genome.wustl.edu	37	19	3978115	3978115	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	3978115	3978115	A	G	SNP	EEF2	ENST00000309311	human	ensembl	74_37	-1	known	missense	c.1769	p.L590P	1.000	superfamily_Ribosomal_S5_D2-typ_fold	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658				15	0	0	13	2	13.3333
SAMD4B	0	genome.wustl.edu	37	19	39847556	39847556	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	39847556	39847556	G	A	SNP	SAMD4B	ENST00000314471	human	ensembl	74_37	+1	known	missense	c.23	p.G8D	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4B	HGNC	ENSG00000179134				39	0	0	25	10	28.5714
AKT2	0	genome.wustl.edu	37	19	40747850	40747850	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	40747850	40747850	C	T	SNP	AKT2	ENST00000392038	human	ensembl	74_37	-1	known	missense	c.568	p.A190T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom	-	no_errors	AKT2	HGNC	ENSG00000105221				84	0	0	43	18	29.5082
HIPK4	0	genome.wustl.edu	37	19	40895647	40895647	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	40895647	40895647	C	T	SNP	HIPK4	ENST00000291823	human	ensembl	74_37	-1	known	missense	c.163	p.E55K	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK4	HGNC	ENSG00000160396				239	0	0	157	42	21.1055
CYP2A7	0	genome.wustl.edu	37	19	41386388	41386388	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	41386388	41386388	C	T	SNP	CYP2A7	ENST00000301146	human	ensembl	74_37	-1	known	silent	c.489	p.T163	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I_CYP2B-like	-	no_errors	CYP2A7	HGNC	ENSG00000198077				150	0	0	102	52	33.7662
ATP1A3	0	genome.wustl.edu	37	19	42492087	42492087	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	42492087	42492087	C	T	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	splice_site	c.357+1	e4+1	1.000	-	-	-	no_errors	ATP1A3	HGNC	ENSG00000105409				189	0	0	90	31	25.6198
CEACAM1	0	genome.wustl.edu	37	19	43026353	43026353	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	43026353	43026353	C	T	SNP	CEACAM1	ENST00000161559	human	ensembl	74_37	-1	known	silent	c.426	p.P142	0.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM1	HGNC	ENSG00000079385				259	0	0	143	50	25.9067
CBLC	0	genome.wustl.edu	37	19	45281204	45281204	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	45281204	45281204	G	A	SNP	CBLC	ENST00000270279	human	ensembl	74_37	+1	known	missense	c.16	p.A6T	0.042	NULL	pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Adaptor_Cbl_N_hlx,pfam_Znf_C3HC4_RING-type,superfamily_Adaptor_Cbl_N_hlx,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	CBLC	HGNC	ENSG00000142273				45	0	0	25	8	24.2424
ERCC1	0	genome.wustl.edu	37	19	45916943	45916943	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	45916943	45916943	G	T	SNP	ERCC1	ENST00000013807	human	ensembl	74_37	-1	known	missense	c.835	p.P279T	1.000	superfamily_RuvA_2-like	pfam_DNA_repair_Rad10,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,tigrfam_DNA_repair_Rad10	-	no_errors	ERCC1	HGNC	ENSG00000012061				125	0	0	87	21	19.4444
GPR4	0	genome.wustl.edu	37	19	46094061	46094061	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	46094061	46094061	A	G	SNP	GPR4	ENST00000323040	human	ensembl	74_37	-1	known	missense	c.1064	p.L355P	0.998	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPR4_orph,prints_GPCR_Rhodpsn,prints_Psych_rcpt	-	no_errors	GPR4	HGNC	ENSG00000177464				111	0	0	72	28	28
RSPH6A	0	genome.wustl.edu	37	19	46299145	46299145	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	46299145	46299145	G	A	SNP	RSPH6A	ENST00000221538	human	ensembl	74_37	-1	known	silent	c.2136	p.G712	0.239	NULL	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941				211	0	0	96	51	34.6939
DPP9	0	genome.wustl.edu	37	19	4682823	4682823	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	4682823	4682823	C	T	SNP	DPP9	ENST00000262960	human	ensembl	74_37	-1	known	missense	c.2359	p.V787I	0.992	pfam_Peptidase_S9,pfam_X-Pro-like_dom	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP9	HGNC	ENSG00000142002				18	0	0	13	5	27.7778
RASIP1	0	genome.wustl.edu	37	19	49238458	49238458	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	49238458	49238458	C	T	SNP	RASIP1	ENST00000222145	human	ensembl	74_37	-1	known	missense	c.1174	p.A392T	0.953	superfamily_SMAD_FHA_domain	pfam_Dil_domain,pfam_Ras-assoc,superfamily_SMAD_FHA_domain,smart_Ras-assoc,pfscan_Dilute,pfscan_Ras-assoc	-	no_errors	RASIP1	HGNC	ENSG00000105538				50	0	0	29	11	27.5
TULP2	0	genome.wustl.edu	37	19	49398261	49398261	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	49398261	49398261	G	A	SNP	TULP2	ENST00000221399	human	ensembl	74_37	-1	known	nonsense	c.508	p.R170*	0.000	NULL	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_C,prints_Tubby_N	-	no_errors	TULP2	HGNC	ENSG00000104804				67	0	0	29	10	25.641
NUCB1	0	genome.wustl.edu	37	19	49416789	49416789	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	49416789	49416789	G	T	SNP	NUCB1	ENST00000263273	human	ensembl	74_37	+1	known	missense	c.725	p.R242M	1.000	pfscan_EF_hand_dom	pfscan_EF_hand_dom	-	no_errors	NUCB1	HGNC	ENSG00000104805				100	0	0	58	15	20.5479
MED25	0	genome.wustl.edu	37	19	50333052	50333052	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	50333052	50333052	C	A	SNP	MED25	ENST00000312865	human	ensembl	74_37	+1	known	missense	c.535	p.H179N	1.000	pfam_Mediator_Med25_VWA	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC	ENSG00000104973				21	0	0	10	10	50
MED25	0	genome.wustl.edu	37	19	50335366	50335366	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	50335366	50335366	G	A	SNP	MED25	ENST00000312865	human	ensembl	74_37	+1	known	silent	c.1326	p.E442	0.999	pfam_Mediator_Med25	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC	ENSG00000104973				76	0	0	45	15	25
MYH14	0	genome.wustl.edu	37	19	50764825	50764825	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	50764825	50764825	C	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	silent	c.2518	p.R840	0.999	superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357				52	0	0	37	12	24.4898
LRRC4B	0	genome.wustl.edu	37	19	51021769	51021769	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	51021769	51021769	C	T	SNP	LRRC4B	ENST00000389201	human	ensembl	74_37	-1	known	missense	c.1201	p.G401S	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4B	HGNC	ENSG00000131409				62	0	0	40	11	21.5686
KLK6	0	genome.wustl.edu	37	19	51465088	51465088	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	51465088	51465088	C	T	SNP	KLK6	ENST00000310157	human	ensembl	74_37	-1	known	missense	c.494	p.R165H	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK6	HGNC	ENSG00000167755				135	0	0	77	26	25.2427
KLK12	0	genome.wustl.edu	37	19	51537328	51537328	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	51537328	51537328	C	T	SNP	KLK12	ENST00000250351	human	ensembl	74_37	-1	known	nonsense	c.105	p.W35*	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK12	HGNC	ENSG00000186474				16	0	0	9	3	25
IGLON5	0	genome.wustl.edu	37	19	51826942	51826942	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	51826942	51826942	G	A	SNP	IGLON5	ENST00000270642	human	ensembl	74_37	+1	known	missense	c.185	p.R62H	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGLON5	HGNC	ENSG00000142549				54	0	0	41	21	33.871
SIGLEC12	0	genome.wustl.edu	37	19	52000164	52000164	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	52000164	52000164	G	A	SNP	SIGLEC12	ENST00000291707	human	ensembl	74_37	-1	known	silent	c.1569	p.D523	0.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC12	HGNC	ENSG00000254521				143	0	0	88	22	20
SIGLEC5	0	genome.wustl.edu	37	19	52115535	52115535	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	52115535	52115535	G	A	SNP	SIGLEC5	ENST00000222107	human	ensembl	74_37	-1	known	silent	c.1605	p.D535	0.000	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC5	HGNC	ENSG00000105501				174	0	0	98	30	23.4375
FPR1	0	genome.wustl.edu	37	19	52249509	52249509	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	52249509	52249509	C	T	SNP	FPR1	ENST00000304748	human	ensembl	74_37	-1	known	missense	c.739	p.A247T	0.040	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt	-	no_errors	FPR1	HGNC	ENSG00000171051				97	0	0	50	17	25.3731
ZNF841	0	genome.wustl.edu	37	19	52569290	52569290	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	52569290	52569290	A	G	SNP	ZNF841	ENST00000389534	human	ensembl	74_37	-1	known	silent	c.1845	p.H615	0.282	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF841	HGNC	ENSG00000197608				149	0	0	88	25	22.1239
PTPRS	0	genome.wustl.edu	37	19	5258089	5258089	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	5258089	5258089	C	T	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	silent	c.648	p.E216	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426				155	0	0	99	23	18.8525
VN1R4	0	genome.wustl.edu	37	19	53770708	53770708	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	53770708	53770708	C	T	SNP	VN1R4	ENST00000311170	human	ensembl	74_37	-1	known	missense	c.211	p.V71I	0.000	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Vmron_rcpt_1	-	no_errors	VN1R4	HGNC	ENSG00000228567				62	0	0	50	4	7.40741
TPM3P9	0	genome.wustl.edu	37	19	53945190	53945190	+	RNA	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	53945190	53945190	G	T	SNP	TPM3P9	ENST00000424846	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.917	-	-	-	no_errors	TPM3P9	HGNC	ENSG00000241015				17	0	0	17	3	15
TFPT	0	genome.wustl.edu	37	19	54618065	54618065	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	54618065	54618065	C	A	SNP	TFPT	ENST00000391759	human	ensembl	74_37	-1	known	silent	c.39	p.V13	1.000	NULL	NULL	-	no_errors	TFPT	HGNC	ENSG00000105619				284	0	0	168	44	20.7547
PRPF31	0	genome.wustl.edu	37	19	54631527	54631527	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	54631527	54631527	C	T	SNP	PRPF31	ENST00000321030	human	ensembl	74_37	+1	known	missense	c.1025	p.P342L	0.999	pfam_Prp31_C	pfam_Nop_dom,pfam_Prp31_C,pfam_NOSIC,smart_NOSIC	-	no_errors	PRPF31	HGNC	ENSG00000105618				13	0	0	2	3	60
LENG8	0	genome.wustl.edu	37	19	54967272	54967272	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	54967272	54967272	G	A	SNP	LENG8	ENST00000326764	human	ensembl	74_37	+1	known	silent	c.1152	p.T384	0.000	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	LENG8	HGNC	ENSG00000167615				138	0	0	83	7	7.77778
NLRP7	0	genome.wustl.edu	37	19	55450913	55450913	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	55450913	55450913	G	A	SNP	NLRP7	ENST00000446217	human	ensembl	74_37	-1	known	missense	c.1358	p.A453V	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634				78	0	0	41	20	32.7869
NLRP2	0	genome.wustl.edu	37	19	55493930	55493930	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	55493930	55493930	C	T	SNP	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	silent	c.864	p.D288	0.999	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556				100	0	0	61	27	30.6818
PPP6R1	0	genome.wustl.edu	37	19	55748048	55748048	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	55748048	55748048	C	T	SNP	PPP6R1	ENST00000412770	human	ensembl	74_37	-1	known	missense	c.1951	p.A651T	0.000	superfamily_ARM-type_fold	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R1	HGNC	ENSG00000105063				20	0	0	15	6	28.5714
ZNF784	0	genome.wustl.edu	37	19	56133455	56133455	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	56133455	56133455	G	A	SNP	ZNF784	ENST00000325351	human	ensembl	74_37	-1	known	nonsense	c.634	p.R212*	0.139	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF784	HGNC	ENSG00000179922				18	0	0	6	4	40
NLRP4	0	genome.wustl.edu	37	19	56369488	56369488	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	56369488	56369488	C	T	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	silent	c.729	p.P243	0.000	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505				171	0	0	91	39	30
ZNF470	0	genome.wustl.edu	37	19	57089695	57089695	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	57089695	57089695	G	A	SNP	ZNF470	ENST00000330619	human	ensembl	74_37	+1	known	missense	c.1898	p.R633H	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF470	HGNC	ENSG00000197016				61	0	0	41	14	25.4545
ZNF835	0	genome.wustl.edu	37	19	57175695	57175695	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	57175695	57175695	G	A	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	missense	c.872	p.A291V	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903				35	0	0	30	10	25
ZIM2	0	genome.wustl.edu	37	19	57286260	57286260	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	57286260	57286260	G	A	SNP	ZIM2	ENST00000221722	human	ensembl	74_37	-1	known	silent	c.1380	p.Y460	0.000	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZIM2	HGNC	ENSG00000269699				60	0	0	35	11	23.913
ZNF543	0	genome.wustl.edu	37	19	57840064	57840064	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	57840064	57840064	C	T	SNP	ZNF543	ENST00000321545	human	ensembl	74_37	+1	known	nonsense	c.1234	p.Q412*	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF543	HGNC	ENSG00000178229				74	0	0	46	16	25.8065
ZNF543	0	genome.wustl.edu	37	19	57840091	57840091	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	57840091	57840091	A	G	SNP	ZNF543	ENST00000321545	human	ensembl	74_37	+1	known	missense	c.1261	p.K421E	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF543	HGNC	ENSG00000178229				67	0	0	43	17	28.3333
ZNF17	0	genome.wustl.edu	37	19	57932498	57932498	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	57932498	57932498	A	G	SNP	ZNF17	ENST00000601808	human	ensembl	74_37	+1	known	silent	c.1638	p.R546	0.006	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF17	HGNC	ENSG00000186272				77	0	0	44	16	26.6667
ZNF8	0	genome.wustl.edu	37	19	58806556	58806556	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	58806556	58806556	A	G	SNP	ZNF8	ENST00000196548	human	ensembl	74_37	+1	known	missense	c.1382	p.H461R	0.006	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF8	Uniprot_gn	ENSG00000083842				324	0	0	191	73	27.6515
ZNF324	0	genome.wustl.edu	37	19	58982184	58982184	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	58982184	58982184	G	A	SNP	ZNF324	ENST00000196482	human	ensembl	74_37	+1	known	missense	c.325	p.V109I	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324	HGNC	ENSG00000083812				195	0	0	97	43	30.7143
ZNF446	0	genome.wustl.edu	37	19	58988846	58988846	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	58988846	58988846	C	T	SNP	ZNF446	ENST00000594369	human	ensembl	74_37	+1	known	silent	c.261	p.R87	0.124	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF446	HGNC	ENSG00000083838				86	0	0	57	22	27.8481
TRIM28	0	genome.wustl.edu	37	19	59059182	59059182	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	59059182	59059182	A	G	SNP	TRIM28	ENST00000253024	human	ensembl	74_37	+1	known	missense	c.863	p.Q288R	1.000	smart_Bbox_C	pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	TRIM28	HGNC	ENSG00000130726				144	0	0	71	28	28.2828
ACSBG2	0	genome.wustl.edu	37	19	6187702	6187702	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	6187702	6187702	C	T	SNP	ACSBG2	ENST00000252669	human	ensembl	74_37	+1	known	silent	c.1773	p.T591	0.004	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSBG2	HGNC	ENSG00000130377				96	0	0	54	29	34.9398
POLRMT	0	genome.wustl.edu	37	19	621151	621151	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	621151	621151	C	T	SNP	POLRMT	ENST00000588649	human	ensembl	74_37	-1	known	silent	c.2547	p.T849	0.012	pfam_DNA-dir_Rpol_phage-type	pfam_DNA-dir_Rpol_phage-type	-	no_errors	POLRMT	HGNC	ENSG00000099821				105	0	0	75	20	21.0526
MIR3940	0	genome.wustl.edu	37	19	6416470	6416470	+	RNA	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	6416470	6416470	G	T	SNP	MIR3940	ENST00000579148	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR3940	HGNC	ENSG00000266722				32	0	0	18	5	21.7391
EMR4P	0	genome.wustl.edu	37	19	6974669	6974669	+	RNA	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	6974669	6974669	G	T	SNP	EMR4P	ENST00000600751	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EMR4P	HGNC	ENSG00000268758				30	0	0	15	5	25
XAB2	0	genome.wustl.edu	37	19	7685556	7685556	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	7685556	7685556	C	A	SNP	XAB2	ENST00000358368	human	ensembl	74_37	-1	known	splice_site	c.1972-1	e15-1	1.000	-	-	-	no_errors	XAB2	HGNC	ENSG00000076924				65	0	0	44	14	24.1379
LRRC8E	0	genome.wustl.edu	37	19	7964581	7964581	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	7964581	7964581	C	T	SNP	LRRC8E	ENST00000306708	human	ensembl	74_37	+1	known	missense	c.1174	p.R392C	0.997	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8E	HGNC	ENSG00000171017				83	0	0	55	12	17.9104
FBN3	0	genome.wustl.edu	37	19	8201150	8201150	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	8201150	8201150	G	A	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	silent	c.1389	p.C463	0.133	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449				136	0	0	74	28	27.451
MARCH2	0	genome.wustl.edu	37	19	8491553	8491553	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	8491553	8491553	G	A	SNP	MARCH2	ENST00000215555	human	ensembl	74_37	+1	known	silent	c.237	p.P79	0.123	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH2	HGNC	ENSG00000099785				81	0	0	56	14	20
HNRNPM	0	genome.wustl.edu	37	19	8550766	8550766	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	8550766	8550766	G	A	SNP	HNRNPM	ENST00000325495	human	ensembl	74_37	+1	known	missense	c.1454	p.R485H	1.000	NULL	pfam_RRM_dom,pfam_HnRNP_M_PY-NLS,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPM	HGNC	ENSG00000099783				168	0	0	114	36	24
ELANE	0	genome.wustl.edu	37	19	855593	855593	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	855593	855593	C	T	SNP	ELANE	ENST00000263621	human	ensembl	74_37	+1	known	silent	c.396	p.N132	0.788	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	ELANE	HGNC	ENSG00000197561				103	0	0	55	18	24.6575
ADAMTS10	0	genome.wustl.edu	37	19	8670161	8670161	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	8670161	8670161	C	T	SNP	ADAMTS10	ENST00000270328	human	ensembl	74_37	-1	known	silent	c.171	p.S57	0.065	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS10	HGNC	ENSG00000142303				37	0	0	9	5	35.7143
MUC16	0	genome.wustl.edu	37	19	8997482	8997482	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	8997482	8997482	C	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.40940	p.R13647Q	0.000	pfam_SEA_dom,pfscan_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				191	0	0	82	38	31.6667
OR7G1	0	genome.wustl.edu	37	19	9225634	9225634	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	9225634	9225634	C	T	SNP	OR7G1	ENST00000293614	human	ensembl	74_37	-1	known	missense	c.806	p.R269Q	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7G1	HGNC	ENSG00000161807				107	0	0	46	22	32.3529
ZNF560	0	genome.wustl.edu	37	19	9578489	9578489	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	9578489	9578489	A	G	SNP	ZNF560	ENST00000301480	human	ensembl	74_37	-1	known	silent	c.1134	p.C378	0.772	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF560	HGNC	ENSG00000198028				118	0	0	80	29	26.6055
EIF5B	0	genome.wustl.edu	37	2	100015340	100015340	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	100015340	100015340	C	T	SNP	EIF5B	ENST00000289371	human	ensembl	74_37	+1	known	missense	c.3523	p.H1175Y	1.000	superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_TIF_IF2_dom3,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417				46	0	0	25	9	26.4706
RANBP2	0	genome.wustl.edu	37	2	109380371	109380371	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	109380371	109380371	C	T	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.3376	p.R1126W	0.996	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				140	0	0	72	14	16.2791
GLI2	0	genome.wustl.edu	37	2	121712924	121712924	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	121712924	121712924	C	T	SNP	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	silent	c.561	p.P187	0.003	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047				67	0	0	45	13	22.4138
DARS	0	genome.wustl.edu	37	2	136673804	136673804	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	136673804	136673804	G	A	SNP	DARS	ENST00000264161	human	ensembl	74_37	-1	known	silent	c.1098	p.D366	0.266	pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Asp-tRNA_synthase	pfam_aa-tRNA-synt_II,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,pfscan_aa-tRNA-synth_II,prints_Asp/Asn-tRNA-synth_IIb,tigrfam_Asp-tRNA_synthase	-	no_errors	DARS	HGNC	ENSG00000115866				74	0	0	47	18	27.6923
NMI	0	genome.wustl.edu	37	2	152135404	152135404	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	152135404	152135404	C	T	SNP	NMI	ENST00000243346	human	ensembl	74_37	-1	known	missense	c.278	p.S93N	0.001	pfam_Nmi/IFP35_N	pfam_Nmi/IFP35_dom,pfam_Nmi/IFP35_N	-	no_errors	NMI	HGNC	ENSG00000123609				23	0	0	14	2	12.5
FMNL2	0	genome.wustl.edu	37	2	153476212	153476212	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	153476212	153476212	T	C	SNP	FMNL2	ENST00000288670	human	ensembl	74_37	+1	known	missense	c.1817	p.V606A	1.000	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin,prints_Wilms_tumour	-	no_errors	FMNL2	HGNC	ENSG00000157827				28	0	0	21	5	19.2308
NBAS	0	genome.wustl.edu	37	2	15679412	15679412	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	15679412	15679412	C	T	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.448	p.A150T	1.000	superfamily_Quino_amine_DH_bsu	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779				75	0	0	45	7	13.4615
DDX1	0	genome.wustl.edu	37	2	15771006	15771006	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	15771006	15771006	T	C	SNP	DDX1	ENST00000233084	human	ensembl	74_37	+1	known	silent	c.2199	p.P733	0.978	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_SPRY_rcpt,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_ConA-like_lec_gl_sf,smart_Helicase_ATP-bd,smart_SPla/RYanodine_receptor_subgr,smart_Helicase_C,pfscan_B30.2/SPRY,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX1	HGNC	ENSG00000079785				110	0	0	43	21	32.8125
GALNT5	0	genome.wustl.edu	37	2	158115711	158115711	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	158115711	158115711	C	A	SNP	GALNT5	ENST00000259056	human	ensembl	74_37	+1	known	missense	c.1117	p.P373T	0.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT5	HGNC	ENSG00000136542				116	0	0	76	20	20.8333
TBR1	0	genome.wustl.edu	37	2	162280036	162280036	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	162280036	162280036	G	A	SNP	TBR1	ENST00000389554	human	ensembl	74_37	+1	known	silent	c.1347	p.A449	0.873	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBR1	HGNC	ENSG00000136535				40	0	0	20	9	31.0345
SCN2A	0	genome.wustl.edu	37	2	166245972	166245972	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	166245972	166245972	T	C	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.5656	p.S1886P	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531				85	0	0	49	13	20.9677
METAP1D	0	genome.wustl.edu	37	2	172945088	172945088	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	172945088	172945088	C	T	SNP	METAP1D	ENST00000315796	human	ensembl	74_37	+1	known	missense	c.962	p.T321M	1.000	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,tigrfam_Pept_M24A_MAP1	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP1	-	no_errors	METAP1D	HGNC	ENSG00000172878				287	0	0	180	62	25.6198
ZAK	0	genome.wustl.edu	37	2	174052313	174052313	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	174052313	174052313	C	T	SNP	ZAK	ENST00000375213	human	ensembl	74_37	+1	known	missense	c.377	p.P126L	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SAM_type1,pfam_SAM_2,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MLTK	Uniprot_gn	ENSG00000091436				78	0	0	48	12	20
TTN	0	genome.wustl.edu	37	2	179397303	179397303	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	179397303	179397303	C	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.96335	p.R32112M	1.000	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				123	0	0	76	25	24.7525
TTN	0	genome.wustl.edu	37	2	179428319	179428319	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	179428319	179428319	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.74836	p.V24946I	0.107	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				151	0	0	81	28	25.6881
TTN	0	genome.wustl.edu	37	2	179457588	179457588	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	179457588	179457588	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.51554	p.Y17185C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				202	0	0	113	32	22.069
KCNS3	0	genome.wustl.edu	37	2	18112824	18112824	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	18112824	18112824	C	T	SNP	KCNS3	ENST00000304101	human	ensembl	74_37	+1	known	silent	c.549	p.S183	0.007	prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv2	-	no_errors	KCNS3	HGNC	ENSG00000170745				61	0	0	33	17	34
NEUROD1	0	genome.wustl.edu	37	2	182542721	182542721	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	182542721	182542721	C	T	SNP	NEUROD1	ENST00000295108	human	ensembl	74_37	-1	known	silent	c.867	p.P289	0.208	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD1	HGNC	ENSG00000162992				101	0	0	78	18	18.75
FAM171B	0	genome.wustl.edu	37	2	187618752	187618752	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	187618752	187618752	G	A	SNP	FAM171B	ENST00000304698	human	ensembl	74_37	+1	known	missense	c.988	p.A330T	1.000	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171B	HGNC	ENSG00000144369				103	0	0	56	22	28.2051
COL3A1	0	genome.wustl.edu	37	2	189863442	189863442	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	189863442	189863442	A	G	SNP	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	missense	c.2020	p.K674E	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542				42	0	0	15	8	34.7826
MYT1L	0	genome.wustl.edu	37	2	1926216	1926216	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	1926216	1926216	G	A	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	missense	c.1325	p.T442M	0.993	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487				144	0	0	84	31	26.9565
GTF3C3	0	genome.wustl.edu	37	2	197657704	197657704	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	197657704	197657704	A	G	SNP	GTF3C3	ENST00000263956	human	ensembl	74_37	-1	known	silent	c.387	p.N129	0.998	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GTF3C3	HGNC	ENSG00000119041				41	0	0	15	4	21.0526
MYT1L	0	genome.wustl.edu	37	2	1983514	1983514	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	1983514	1983514	C	T	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	silent	c.36	p.T12	0.991	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487				60	0	0	38	11	22.449
SGOL2	0	genome.wustl.edu	37	2	201436999	201436999	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	201436999	201436999	G	A	SNP	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	missense	c.1930	p.G644S	0.000	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535				110	0	0	73	18	19.7802
FZD7	0	genome.wustl.edu	37	2	202900994	202900994	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	202900994	202900994	A	G	SNP	FZD7	ENST00000286201	human	ensembl	74_37	+1	known	missense	c.1624	p.I542V	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD7	HGNC	ENSG00000155760				164	0	0	103	30	22.5564
PTH2R	0	genome.wustl.edu	37	2	209358139	209358139	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	209358139	209358139	C	T	SNP	PTH2R	ENST00000272847	human	ensembl	74_37	+1	known	missense	c.1408	p.R470C	0.153	NULL	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	PTH2R	HGNC	ENSG00000144407				63	0	0	33	19	36.5385
MAP2	0	genome.wustl.edu	37	2	210570356	210570356	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	210570356	210570356	C	T	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	missense	c.4637	p.S1546F	1.000	NULL	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018				111	0	0	74	12	13.9535
CPS1	0	genome.wustl.edu	37	2	211457661	211457661	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	211457661	211457661	C	T	SNP	CPS1	ENST00000430249	human	ensembl	74_37	+1	known	missense	c.1163	p.P388L	1.000	pfam_GATASE,tigrfam_CarbamoylP_synth_ssu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_CarbamoylP_synth_lsu_oligo,pfam_GATASE,pfam_CarbamoylP_synth_lsu_N,pfam_MGS-like_dom,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu	-	no_errors	CPS1	HGNC	ENSG00000021826				131	0	0	64	12	15.7895
ABCA12	0	genome.wustl.edu	37	2	215872505	215872505	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	215872505	215872505	C	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	silent	c.2538	p.S846	0.677	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452				87	0	0	42	11	20.7547
TNS1	0	genome.wustl.edu	37	2	218696225	218696225	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	218696225	218696225	C	T	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	missense	c.2951	p.G984D	1.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				18	0	0	22	6	21.4286
CXCR1	0	genome.wustl.edu	37	2	219028909	219028909	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	219028909	219028909	C	T	SNP	CXCR1	ENST00000295683	human	ensembl	74_37	-1	known	silent	c.1026	p.S342	0.795	prints_Chemokine_CXCR1	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR_1/2,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR1,prints_Chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CXCR1	HGNC	ENSG00000163464				122	0	0	80	19	19.1919
VIL1	0	genome.wustl.edu	37	2	219294155	219294155	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	219294155	219294155	G	A	SNP	VIL1	ENST00000248444	human	ensembl	74_37	+1	known	missense	c.715	p.A239T	0.986	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VIL1	HGNC	ENSG00000127831				106	0	0	86	21	19.6262
PLCD4	0	genome.wustl.edu	37	2	219498840	219498840	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	219498840	219498840	T	C	SNP	PLCD4	ENST00000417849	human	ensembl	74_37	+1	known	missense	c.1619	p.V540A	1.000	pfam_PLipase_C_Pinositol-sp_Y,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_Pinositol-sp_Y,pfscan_PLipase_C_Pinositol-sp_Y	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD4	HGNC	ENSG00000115556				24	0	0	15	6	28.5714
FEV	0	genome.wustl.edu	37	2	219846895	219846895	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	219846895	219846895	C	A	SNP	FEV	ENST00000295727	human	ensembl	74_37	-1	known	missense	c.211	p.G71C	1.000	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	FEV	HGNC	ENSG00000163497				55	0	0	30	8	21.0526
IHH	0	genome.wustl.edu	37	2	219920566	219920566	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	219920566	219920566	G	A	SNP	IHH	ENST00000295731	human	ensembl	74_37	-1	known	missense	c.599	p.T200M	1.000	pirsf_Hedgehog,pfam_Hint_dom,prints_Hedgehog	pirsf_Hedgehog,pfam_Hedgehog_signaling_dom,pfam_Hint_dom,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom,smart_Hint_dom_N,smart_Hint_dom_C,prints_Hedgehog,pfscan_Intein_splice_site	-	no_errors	IHH	HGNC	ENSG00000163501				53	0	0	23	14	37.8378
CHPF	0	genome.wustl.edu	37	2	220405701	220405701	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	220405701	220405701	C	A	SNP	CHPF	ENST00000243776	human	ensembl	74_37	-1	known	silent	c.1035	p.L345	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc	-	no_errors	CHPF	HGNC	ENSG00000123989				84	0	0	67	7	9.45946
OBSL1	0	genome.wustl.edu	37	2	220427220	220427220	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	220427220	220427220	G	A	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.2857	p.R953C	0.926	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				96	0	0	52	20	27.7778
OBSL1	0	genome.wustl.edu	37	2	220428091	220428091	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	220428091	220428091	G	A	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.2666	p.T889I	0.279	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006				47	0	0	29	5	14.7059
STK11IP	0	genome.wustl.edu	37	2	220476441	220476441	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	220476441	220476441	G	A	SNP	STK11IP	ENST00000456909	human	ensembl	74_37	+1	novel	silent	c.2220	p.P740	0.000	NULL	NULL	-	no_errors	STK11IP	HGNC	ENSG00000144589				90	0	0	54	18	25
PAX3	0	genome.wustl.edu	37	2	223161807	223161807	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	223161807	223161807	C	T	SNP	PAX3	ENST00000392069	human	ensembl	74_37	-1	known	missense	c.211	p.V71I	1.000	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	pfam_Paired_dom,pfam_Pax7,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX3	HGNC	ENSG00000135903				60	0	0	24	7	22.5806
DOCK10	0	genome.wustl.edu	37	2	225750838	225750838	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	225750838	225750838	G	A	SNP	DOCK10	ENST00000258390	human	ensembl	74_37	-1	known	missense	c.554	p.S185F	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905				158	0	0	98	28	22.2222
TM4SF20	0	genome.wustl.edu	37	2	228228611	228228611	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	228228611	228228611	A	G	SNP	TM4SF20	ENST00000304568	human	ensembl	74_37	-1	known	silent	c.519	p.S173	0.000	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF20	HGNC	ENSG00000168955				141	0	0	104	24	18.75
TWIST2	0	genome.wustl.edu	37	2	239757216	239757216	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	239757216	239757216	C	T	SNP	TWIST2	ENST00000448943	human	ensembl	74_37	+1	known	silent	c.360	p.V120	0.990	superfamily_bHLH_dom,smart_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TWIST2	HGNC	ENSG00000233608				24	0	0	6	5	45.4545
HDAC4	0	genome.wustl.edu	37	2	240036871	240036871	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	240036871	240036871	C	T	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.1654	p.A552T	0.000	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024				223	0	0	154	37	19.3717
OR6B3	0	genome.wustl.edu	37	2	240984626	240984626	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	240984626	240984626	C	T	SNP	OR6B3	ENST00000319423	human	ensembl	74_37	-1	known	silent	c.864	p.L288	0.287	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6B3	HGNC	ENSG00000178586				265	0	0	151	43	22.1649
MYEOV2	0	genome.wustl.edu	37	2	241069366	241069366	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	241069366	241069366	G	A	SNP	MYEOV2	ENST00000307266	human	ensembl	74_37	-1	known	missense	c.343	p.R115C	0.000	NULL	NULL	-	no_errors	MYEOV2	HGNC	ENSG00000172428				125	0	0	88	12	12
ATAD2B	0	genome.wustl.edu	37	2	24149573	24149573	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	24149573	24149573	G	T	SNP	ATAD2B	ENST00000238789	human	ensembl	74_37	-1	known	missense	c.68	p.P23H	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778				8	0	0	4	3	42.8571
RNPEPL1	0	genome.wustl.edu	37	2	241512589	241512589	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	241512589	241512589	C	T	SNP	RNPEPL1	ENST00000270357	human	ensembl	74_37	+1	known	silent	c.39	p.G13	0.981	pfam_Peptidase_M1_N	pfam_Peptidase_M1_C,pfam_Peptidase_M1_N,superfamily_ARM-type_fold,prints_Peptidase_M1_N	-	no_errors	RNPEPL1	HGNC	ENSG00000142327				30	0	0	14	3	17.6471
KIF1A	0	genome.wustl.edu	37	2	241708580	241708580	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	241708580	241708580	G	A	SNP	KIF1A	ENST00000498729	human	ensembl	74_37	-1	known	silent	c.1467	p.G489	0.535	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294				18	0	0	14	5	26.3158
CENPO	0	genome.wustl.edu	37	2	25038554	25038554	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	25038554	25038554	C	T	SNP	CENPO	ENST00000260662	human	ensembl	74_37	+1	known	missense	c.523	p.H175Y	1.000	pfam_CENP-O	pfam_CENP-O	-	no_errors	CENPO	HGNC	ENSG00000138092				136	0	0	70	25	26.3158
ADCY3	0	genome.wustl.edu	37	2	25141779	25141779	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	25141779	25141779	G	A	SNP	ADCY3	ENST00000260600	human	ensembl	74_37	-1	known	silent	c.78	p.S26	0.036	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY3	HGNC	ENSG00000138031				63	0	0	27	12	30.7692
OTOF	0	genome.wustl.edu	37	2	26698267	26698267	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	26698267	26698267	G	A	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.3086	p.P1029L	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155				80	0	0	49	18	26.8657
SLC5A6	0	genome.wustl.edu	37	2	27430328	27430328	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	27430328	27430328	C	T	SNP	SLC5A6	ENST00000310574	human	ensembl	74_37	-1	known	missense	c.191	p.R64H	1.000	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A6	HGNC	ENSG00000138074				82	0	0	41	16	28.0702
EIF2B4	0	genome.wustl.edu	37	2	27592748	27592748	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	27592748	27592748	G	A	SNP	EIF2B4	ENST00000347454	human	ensembl	74_37	-1	known	missense	c.70	p.P24S	0.985	NULL	pfam_IF-2B-related	-	no_errors	EIF2B4	HGNC	ENSG00000115211				13	0	0	7	3	30
C2orf16	0	genome.wustl.edu	37	2	27803796	27803796	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	27803796	27803796	C	T	SNP	C2orf16	ENST00000408964	human	ensembl	74_37	+1	known	nonsense	c.4357	p.R1453*	0.003	NULL	NULL	-	no_errors	C2orf16	HGNC	ENSG00000221843				194	0	0	124	45	26.6272
PLB1	0	genome.wustl.edu	37	2	28821628	28821628	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	28821628	28821628	G	A	SNP	PLB1	ENST00000422425	human	ensembl	74_37	+1	known	splice_site	c.2441+1	e34+1	0.996	-	-	-	no_errors	PLB1	HGNC	ENSG00000163803				132	0	0	60	29	32.5843
ALK	0	genome.wustl.edu	37	2	29416518	29416518	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	29416518	29416518	C	T	SNP	ALK	ENST00000389048	human	ensembl	74_37	-1	known	missense	c.4435	p.A1479T	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_MAM_dom,superfamily_Kinase-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_MAM_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ALK	HGNC	ENSG00000171094				194	0	0	110	40	26.6667
GALNT14	0	genome.wustl.edu	37	2	31178570	31178570	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	31178570	31178570	C	T	SNP	GALNT14	ENST00000349752	human	ensembl	74_37	-1	known	missense	c.568	p.A190T	0.998	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT14	HGNC	ENSG00000158089				114	0	0	66	27	29.0323
XDH	0	genome.wustl.edu	37	2	31567565	31567565	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	31567565	31567565	G	A	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	missense	c.3389	p.A1130V	1.000	pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125				75	0	0	44	12	21.4286
MYADML	0	genome.wustl.edu	37	2	33952599	33952599	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	33952599	33952599	G	A	SNP	MYADML	ENST00000474610	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649				35	0	0	22	8	26.6667
NRXN1	0	genome.wustl.edu	37	2	50280512	50280512	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	50280512	50280512	G	A	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.4001	p.A1334V	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				118	0	0	72	30	29.4118
RTN4	0	genome.wustl.edu	37	2	55254422	55254422	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	55254422	55254422	T	C	SNP	RTN4	ENST00000337526	human	ensembl	74_37	-1	known	silent	c.813	p.E271	0.926	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN4	HGNC	ENSG00000115310				77	0	0	42	10	19.2308
PNPT1	0	genome.wustl.edu	37	2	55900055	55900055	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	55900055	55900055	G	A	SNP	PNPT1	ENST00000415374	human	ensembl	74_37	-1	known	missense	c.839	p.S280L	0.832	superfamily_PNPase_PH_RNA-bd_bac/org-type,pirsf_PNPase,tigrfam_PNPase	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,pfam_PNPase_PH_RNA-bd_bac/org-type,pfam_KH_dom_type_1,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2,superfamily_PNPase_PH_RNA-bd_bac/org-type,superfamily_NA-bd_OB-fold,smart_KH_dom,smart_RNA-binding_domain_S1,pirsf_PNPase,pfscan_KH_dom_type_1,pfscan_Rbsml_prot_S1_RNA-bd_dom,tigrfam_PNPase	-	no_errors	PNPT1	HGNC	ENSG00000138035				99	0	0	53	19	26.3889
VRK2	0	genome.wustl.edu	37	2	58362312	58362312	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	58362312	58362312	G	T	SNP	VRK2	ENST00000340157	human	ensembl	74_37	+1	known	missense	c.834	p.W278C	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	VRK2	HGNC	ENSG00000028116				146	0	0	60	17	22.0779
BCL11A	0	genome.wustl.edu	37	2	60688451	60688451	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	60688451	60688451	C	T	SNP	BCL11A	ENST00000335712	human	ensembl	74_37	-1	known	silent	c.1596	p.A532	0.946	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11A	HGNC	ENSG00000119866				45	0	0	18	11	37.931
ADD2	0	genome.wustl.edu	37	2	70890765	70890765	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	70890765	70890765	G	A	SNP	ADD2	ENST00000264436	human	ensembl	74_37	-1	known	missense	c.1973	p.A658V	0.003	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD2	HGNC	ENSG00000075340				171	0	0	116	15	11.4504
ADD2	0	genome.wustl.edu	37	2	70904970	70904970	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	70904970	70904970	T	C	SNP	ADD2	ENST00000264436	human	ensembl	74_37	-1	known	missense	c.1423	p.M475V	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD2	HGNC	ENSG00000075340				64	0	0	43	12	21.8182
ADD2	0	genome.wustl.edu	37	2	70919573	70919573	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	70919573	70919573	G	A	SNP	ADD2	ENST00000264436	human	ensembl	74_37	-1	known	missense	c.667	p.R223C	1.000	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD2	HGNC	ENSG00000075340				52	0	0	27	10	27.027
TET3	0	genome.wustl.edu	37	2	74328185	74328185	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	74328185	74328185	G	A	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	missense	c.3865	p.E1289K	0.994	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605				30	0	0	23	7	23.3333
INO80B	0	genome.wustl.edu	37	2	74684957	74684957	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	74684957	74684957	C	A	SNP	INO80B	ENST00000452361	human	ensembl	74_37	+1	known	missense	c.1037	p.P346H	0.997	NULL	pfam_INO80B_C,pfam_Znf_HIT	-	no_errors	INO80B	HGNC	ENSG00000115274				67	0	0	37	12	24.4898
KIDINS220	0	genome.wustl.edu	37	2	8871439	8871439	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	8871439	8871439	G	A	SNP	KIDINS220	ENST00000256707	human	ensembl	74_37	-1	known	missense	c.4727	p.A1576V	0.998	NULL	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313				126	0	0	61	29	32.2222
ANKRD20A8P	0	genome.wustl.edu	37	2	95480821	95480821	+	RNA	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	95480821	95480821	A	G	SNP	ANKRD20A8P	ENST00000432432	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.827	-	-	-	no_errors	ANKRD20A8P	HGNC	ENSG00000229089				33	0	0	31	11	26.1905
ADRA2B	0	genome.wustl.edu	37	2	96781543	96781543	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	96781543	96781543	G	A	SNP	ADRA2B	ENST00000409345	human	ensembl	74_37	-1	known	missense	c.346	p.R116C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA2B_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRA2B	HGNC	ENSG00000222040				55	0	0	33	7	17.5
ZAP70	0	genome.wustl.edu	37	2	98351887	98351887	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	98351887	98351887	C	T	SNP	ZAP70	ENST00000264972	human	ensembl	74_37	+1	known	silent	c.1257	p.G419	0.012	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ZAP70	HGNC	ENSG00000115085				193	0	0	123	39	24.0741
TASP1	0	genome.wustl.edu	37	20	13514762	13514762	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	13514762	13514762	C	T	SNP	TASP1	ENST00000337743	human	ensembl	74_37	-1	known	silent	c.702	p.T234	0.110	pfam_Peptidase_T2	pfam_Peptidase_T2	-	no_errors	TASP1	HGNC	ENSG00000089123				182	0	0	101	55	35.2564
SIRPB2	0	genome.wustl.edu	37	20	1471995	1471995	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	1471995	1471995	G	A	SNP	SIRPB2	ENST00000359801	human	ensembl	74_37	-1	known	missense	c.11	p.T4M	0.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIRPB2	HGNC	ENSG00000196209				24	0	0	21	5	19.2308
SLC24A3	0	genome.wustl.edu	37	20	19193535	19193535	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	19193535	19193535	C	T	SNP	SLC24A3	ENST00000328041	human	ensembl	74_37	+1	known	missense	c.49	p.R17C	0.647	NULL	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A3	HGNC	ENSG00000185052				13	0	0	5	3	37.5
C20orf26	0	genome.wustl.edu	37	20	20037346	20037346	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	20037346	20037346	C	T	SNP	C20orf26	ENST00000245957	human	ensembl	74_37	+1	known	nonsense	c.49	p.R17*	1.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101				90	0	0	38	22	36.6667
C20orf26	0	genome.wustl.edu	37	20	20232281	20232281	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	20232281	20232281	C	A	SNP	C20orf26	ENST00000245957	human	ensembl	74_37	+1	known	nonsense	c.2202	p.C734*	1.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101				163	0	0	126	26	17.1053
GZF1	0	genome.wustl.edu	37	20	23346149	23346149	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	23346149	23346149	T	C	SNP	GZF1	ENST00000338121	human	ensembl	74_37	+1	known	missense	c.1129	p.F377L	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	GZF1	HGNC	ENSG00000125812				174	0	0	159	31	16.3158
CSTL1	0	genome.wustl.edu	37	20	23421091	23421091	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	23421091	23421091	C	T	SNP	CSTL1	ENST00000246020	human	ensembl	74_37	+1	known	nonsense	c.187	p.R63*	0.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CSTL1	HGNC	ENSG00000125823				163	0	0	140	37	20.904
NOP56	0	genome.wustl.edu	37	20	2637428	2637428	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	2637428	2637428	A	G	SNP	NOP56	ENST00000329276	human	ensembl	74_37	+1	known	missense	c.1168	p.T390A	1.000	pfam_Nop_dom	pfam_Nop_dom,pfam_NOSIC,pfam_NOP5_N,smart_NOSIC	-	no_errors	NOP56	HGNC	ENSG00000101361				73	0	0	71	14	16.4706
XKR7	0	genome.wustl.edu	37	20	30584373	30584373	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	30584373	30584373	C	T	SNP	XKR7	ENST00000562532	human	ensembl	74_37	+1	known	missense	c.853	p.R285W	1.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR7	HGNC	ENSG00000260903				58	0	0	40	11	21.5686
XKR7	0	genome.wustl.edu	37	20	30584709	30584709	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	30584709	30584709	G	A	SNP	XKR7	ENST00000562532	human	ensembl	74_37	+1	known	missense	c.1189	p.A397T	0.980	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR7	HGNC	ENSG00000260903				98	0	0	77	24	23.7624
BPIFB4	0	genome.wustl.edu	37	20	31672738	31672738	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	31672738	31672738	C	T	SNP	BPIFB4	ENST00000375483	human	ensembl	74_37	+1	known	missense	c.718	p.R240W	0.995	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191				69	0	0	52	11	17.4603
ACSS2	0	genome.wustl.edu	37	20	33464483	33464483	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	33464483	33464483	G	A	SNP	ACSS2	ENST00000253382	human	ensembl	74_37	+1	known	missense	c.35	p.S12N	0.870	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS2	HGNC	ENSG00000131069				11	0	0	9	3	25
MYH7B	0	genome.wustl.edu	37	20	33582038	33582038	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	33582038	33582038	C	T	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	missense	c.2660	p.P887L	0.998	superfamily_P-loop_NTPase	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814				240	1	0.414938	182	46	20.1754
PROCR	0	genome.wustl.edu	37	20	33764042	33764042	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	33764042	33764042	G	A	SNP	PROCR	ENST00000216968	human	ensembl	74_37	+1	known	missense	c.394	p.E132K	0.049	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	-	no_errors	PROCR	HGNC	ENSG00000101000				150	1	0.662252	108	64	37.2093
CEP250	0	genome.wustl.edu	37	20	34050329	34050329	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	34050329	34050329	A	G	SNP	CEP250	ENST00000397527	human	ensembl	74_37	+1	known	missense	c.137	p.Q46R	1.000	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001				24	0	0	27	9	25
CEP250	0	genome.wustl.edu	37	20	34090421	34090421	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	34090421	34090421	G	T	SNP	CEP250	ENST00000397527	human	ensembl	74_37	+1	known	missense	c.4224	p.Q1408H	1.000	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001				107	0	0	104	7	6.30631
CEP250	0	genome.wustl.edu	37	20	34091721	34091721	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	34091721	34091721	G	A	SNP	CEP250	ENST00000397527	human	ensembl	74_37	+1	known	missense	c.5524	p.A1842T	0.000	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001				41	0	0	46	4	8
TGIF2	0	genome.wustl.edu	37	20	35207307	35207307	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	35207307	35207307	G	A	SNP	TGIF2	ENST00000373872	human	ensembl	74_37	+1	known	missense	c.130	p.A44T	1.000	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TGIF2	HGNC	ENSG00000118707				196	0	0	136	35	20.4678
SOGA1	0	genome.wustl.edu	37	20	35443741	35443741	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	35443741	35443741	C	T	SNP	SOGA1	ENST00000237536	human	ensembl	74_37	-1	known	missense	c.2104	p.E702K	1.000	NULL	pfam_SOGA	-	no_errors	SOGA1	HGNC	ENSG00000149639				58	0	0	51	10	16.3934
TTI1	0	genome.wustl.edu	37	20	36640099	36640099	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	36640099	36640099	C	T	SNP	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	missense	c.2120	p.R707H	0.981	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407				90	0	0	55	12	17.9104
KIAA1755	0	genome.wustl.edu	37	20	36850996	36850996	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	36850996	36850996	C	T	SNP	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	missense	c.2272	p.A758T	0.997	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633				49	0	0	37	14	27.451
RALGAPB	0	genome.wustl.edu	37	20	37168453	37168453	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	37168453	37168453	G	A	SNP	RALGAPB	ENST00000262879	human	ensembl	74_37	+1	known	missense	c.2414	p.R805Q	1.000	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPB	HGNC	ENSG00000170471				57	0	0	59	12	16.9014
DHX35	0	genome.wustl.edu	37	20	37632537	37632537	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	37632537	37632537	G	A	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	missense	c.998	p.R333H	0.994	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX35	HGNC	ENSG00000101452				172	0	0	92	24	20.6897
CHD6	0	genome.wustl.edu	37	20	40043836	40043836	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	40043836	40043836	G	A	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.6929	p.A2310V	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177				138	0	0	126	27	17.6471
MYBL2	0	genome.wustl.edu	37	20	42328684	42328684	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	42328684	42328684	G	A	SNP	MYBL2	ENST00000217026	human	ensembl	74_37	+1	known	silent	c.951	p.S317	1.000	NULL	pfam_C-myb_C,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL2	HGNC	ENSG00000101057				108	0	0	100	14	12.2807
RBPJL	0	genome.wustl.edu	37	20	43945492	43945492	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	43945492	43945492	C	T	SNP	RBPJL	ENST00000343694	human	ensembl	74_37	+1	known	missense	c.1447	p.P483S	0.967	NULL	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJL	HGNC	ENSG00000124232				163	0	0	124	27	17.8808
RBPJL	0	genome.wustl.edu	37	20	43945567	43945567	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	43945567	43945567	C	T	SNP	RBPJL	ENST00000343694	human	ensembl	74_37	+1	known	missense	c.1522	p.R508C	0.955	NULL	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJL	HGNC	ENSG00000124232				177	0	0	155	36	18.8482
ZSWIM3	0	genome.wustl.edu	37	20	44507168	44507168	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	44507168	44507168	G	A	SNP	ZSWIM3	ENST00000255152	human	ensembl	74_37	+1	known	silent	c.1971	p.Q657	0.538	NULL	pfam_Znf_SWIM,pfam_MULE_transposase_dom,pfam_Transposase,smart_Znf_PMZ,pfscan_Znf_SWIM	-	no_errors	ZSWIM3	HGNC	ENSG00000132801				250	0	0	217	36	14.2292
SLC13A3	0	genome.wustl.edu	37	20	45192184	45192184	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	45192184	45192184	G	A	SNP	SLC13A3	ENST00000279027	human	ensembl	74_37	-1	known	missense	c.1501	p.R501C	1.000	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A3	HGNC	ENSG00000158296				49	0	0	34	6	15
TP53RK	0	genome.wustl.edu	37	20	45315714	45315714	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	45315714	45315714	C	T	SNP	TP53RK	ENST00000372114	human	ensembl	74_37	-1	known	missense	c.440	p.G147E	0.999	pfam_LipoPS_kinase,pfam_Prot_kinase_dom,pfam_RIO-like_kinase,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom,tigrfam_Bud32	pfam_LipoPS_kinase,pfam_Prot_kinase_dom,pfam_RIO-like_kinase,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom,tigrfam_Bud32	-	no_errors	TP53RK	HGNC	ENSG00000172315				205	1	0.485437	169	36	17.561
PREX1	0	genome.wustl.edu	37	20	47244406	47244406	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	47244406	47244406	C	T	SNP	PREX1	ENST00000371941	human	ensembl	74_37	-1	known	missense	c.4862	p.R1621Q	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX1	HGNC	ENSG00000124126				46	0	0	22	6	21.4286
ZNFX1	0	genome.wustl.edu	37	20	47865967	47865967	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	47865967	47865967	C	T	SNP	ZNFX1	ENST00000371752	human	ensembl	74_37	-1	known	silent	c.3594	p.S1198	0.004	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_Znf_NFX1	-	no_errors	ZNFX1	HGNC	ENSG00000124201				206	0	0	148	36	19.5652
ZNFX1	0	genome.wustl.edu	37	20	47887288	47887288	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	47887288	47887288	C	T	SNP	ZNFX1	ENST00000371752	human	ensembl	74_37	-1	known	missense	c.1061	p.R354H	0.998	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_Znf_NFX1	-	no_errors	ZNFX1	HGNC	ENSG00000124201				222	0	0	195	30	13.3333
PTGIS	0	genome.wustl.edu	37	20	48166701	48166701	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	48166701	48166701	G	T	SNP	PTGIS	ENST00000244043	human	ensembl	74_37	-1	known	missense	c.100	p.L34M	0.776	superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I	-	no_errors	PTGIS	HGNC	ENSG00000124212				99	0	0	69	15	17.8571
KCNG1	0	genome.wustl.edu	37	20	49620462	49620462	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	49620462	49620462	C	T	SNP	KCNG1	ENST00000506387	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KCNG1	HGNC	ENSG00000026559				13	0	0	21	3	12.5
NFATC2	0	genome.wustl.edu	37	20	50139969	50139969	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	50139969	50139969	G	A	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.811	p.R271C	1.000	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096				70	0	0	46	13	22.0339
ATP9A	0	genome.wustl.edu	37	20	50241845	50241845	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	50241845	50241845	C	T	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	silent	c.1902	p.T634	0.198	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793				98	0	0	71	19	21.1111
SALL4	0	genome.wustl.edu	37	20	50401022	50401022	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	50401022	50401022	C	T	SNP	SALL4	ENST00000217086	human	ensembl	74_37	-1	known	missense	c.2944	p.V982M	0.817	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL4	HGNC	ENSG00000101115				143	0	0	78	45	36.5854
RAE1	0	genome.wustl.edu	37	20	55948536	55948536	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	55948536	55948536	G	A	SNP	RAE1	ENST00000371242	human	ensembl	74_37	+1	known	silent	c.648	p.R216	0.837	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RAE1	HGNC	ENSG00000101146				82	0	0	54	20	27.027
CTCFL	0	genome.wustl.edu	37	20	56098859	56098859	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	56098859	56098859	C	T	SNP	CTCFL	ENST00000423479	human	ensembl	74_37	-1	known	missense	c.403	p.A135T	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCFL	HGNC	ENSG00000124092				187	0	0	153	30	16.3934
NPEPL1	0	genome.wustl.edu	37	20	57269566	57269566	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	57269566	57269566	G	A	SNP	NPEPL1	ENST00000356091	human	ensembl	74_37	+1	known	missense	c.425	p.R142Q	0.511	NULL	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	-	no_errors	NPEPL1	HGNC	ENSG00000215440				100	0	0	93	25	21.1864
TUBB1	0	genome.wustl.edu	37	20	57599419	57599419	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	57599419	57599419	G	A	SNP	TUBB1	ENST00000217133	human	ensembl	74_37	+1	known	missense	c.937	p.V313M	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB1	HGNC	ENSG00000101162				84	0	0	76	22	22.449
CDH4	0	genome.wustl.edu	37	20	60503335	60503335	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	60503335	60503335	C	T	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	missense	c.1859	p.A620V	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242				352	0	0	269	55	16.9753
LAMA5	0	genome.wustl.edu	37	20	60913399	60913399	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	60913399	60913399	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.1645	p.A549T	0.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				32	0	0	24	6	20
CHRNA4	0	genome.wustl.edu	37	20	61981063	61981063	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	61981063	61981063	G	A	SNP	CHRNA4	ENST00000370263	human	ensembl	74_37	-1	known	missense	c.1700	p.A567V	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA4	HGNC	ENSG00000101204				112	0	0	122	19	13.4752
KCNQ2	0	genome.wustl.edu	37	20	62038258	62038258	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	62038258	62038258	C	T	SNP	KCNQ2	ENST00000354587	human	ensembl	74_37	-1	known	silent	c.2382	p.T794	0.865	pfam_Ankyrin-G_BS	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ2	HGNC	ENSG00000075043				24	0	0	29	7	19.4444
MYT1	0	genome.wustl.edu	37	20	62853330	62853330	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	62853330	62853330	C	G	SNP	MYT1	ENST00000536311	human	ensembl	74_37	+1	known	missense	c.2407	p.P803A	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132				66	0	0	81	11	11.9565
MYT1	0	genome.wustl.edu	37	20	62863600	62863600	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	62863600	62863600	C	T	SNP	MYT1	ENST00000536311	human	ensembl	74_37	+1	known	missense	c.2840	p.A947V	1.000	pfam_Znf_C2HC	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132				90	0	0	63	15	19.2308
PCMTD2	0	genome.wustl.edu	37	20	62904883	62904883	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	62904883	62904883	G	A	SNP	PCMTD2	ENST00000308824	human	ensembl	74_37	+1	known	missense	c.1016	p.R339H	0.962	NULL	pfam_PCMT	-	no_errors	PCMTD2	HGNC	ENSG00000203880				191	0	0	168	43	20.3791
PLCB1	0	genome.wustl.edu	37	20	8630047	8630047	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	8630047	8630047	G	A	SNP	PLCB1	ENST00000338037	human	ensembl	74_37	+1	known	missense	c.545	p.R182Q	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB1	HGNC	ENSG00000182621				74	0	0	61	12	16.4384
RSPO4	0	genome.wustl.edu	37	20	947857	947857	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	947857	947857	C	T	SNP	RSPO4	ENST00000217260	human	ensembl	74_37	-1	known	silent	c.369	p.P123	0.040	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO4	HGNC	ENSG00000101282				93	0	0	100	23	18.6992
TMPRSS15	0	genome.wustl.edu	37	21	19744529	19744529	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	19744529	19744529	G	A	SNP	TMPRSS15	ENST00000284885	human	ensembl	74_37	-1	known	silent	c.645	p.D215	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_Peptidase_S1,pfam_CUB_dom,pfam_MAM_dom,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_Peptidase_S1A_nudel,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_ConA-like_lec_gl_sf,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_MAM_dom,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,pfscan_SEA_dom,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS15	HGNC	ENSG00000154646				89	0	0	32	11	25.5814
KRTAP13-4	0	genome.wustl.edu	37	21	31802859	31802859	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	31802859	31802859	C	T	SNP	KRTAP13-4	ENST00000334068	human	ensembl	74_37	+1	known	missense	c.266	p.S89F	0.044	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP13-4	HGNC	ENSG00000186971				64	0	0	45	13	22.4138
PAXBP1	0	genome.wustl.edu	37	21	34134492	34134492	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	34134492	34134492	A	G	SNP	PAXBP1	ENST00000331923	human	ensembl	74_37	-1	known	silent	c.786	p.S262	0.799	NULL	pfam_GCFC_dom	-	no_errors	PAXBP1	HGNC	ENSG00000159086				79	0	0	48	14	22.5806
SON	0	genome.wustl.edu	37	21	34923050	34923050	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	34923050	34923050	G	A	SNP	SON	ENST00000356577	human	ensembl	74_37	+1	known	missense	c.1513	p.E505K	1.000	NULL	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_dsRNA-bd_dom	-	no_errors	SON	HGNC	ENSG00000159140				292	0	0	181	54	22.9787
BRWD1	0	genome.wustl.edu	37	21	40610462	40610462	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	40610462	40610462	G	A	SNP	BRWD1	ENST00000333229	human	ensembl	74_37	-1	known	missense	c.2519	p.S840L	0.995	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD1	HGNC	ENSG00000185658				63	0	0	32	11	25.5814
PRDM15	0	genome.wustl.edu	37	21	43230715	43230715	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	43230715	43230715	C	T	SNP	PRDM15	ENST00000470586	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PRDM15	HGNC	ENSG00000141956				30	0	0	13	3	18.75
PWP2	0	genome.wustl.edu	37	21	45534493	45534493	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45534493	45534493	G	A	SNP	PWP2	ENST00000486126	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PWP2	HGNC	ENSG00000241945				60	0	0	32	14	30.4348
PWP2	0	genome.wustl.edu	37	21	45540349	45540349	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45540349	45540349	G	A	SNP	PWP2	ENST00000291576	human	ensembl	74_37	+1	known	missense	c.1309	p.G437R	1.000	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_SSU_processome_Utp12,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PWP2	HGNC	ENSG00000241945				297	1	0.33557	178	46	20.5357
PWP2	0	genome.wustl.edu	37	21	45544527	45544527	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45544527	45544527	C	T	SNP	PWP2	ENST00000291576	human	ensembl	74_37	+1	known	silent	c.1884	p.F628	0.224	superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat	pfam_WD40_repeat,pfam_SSU_processome_Utp12,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PWP2	HGNC	ENSG00000241945				84	0	0	48	15	23.8095
DNMT3L	0	genome.wustl.edu	37	21	45671576	45671576	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45671576	45671576	C	A	SNP	DNMT3L	ENST00000270172	human	ensembl	74_37	-1	known	missense	c.699	p.E233D	0.932	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	DNMT3L	HGNC	ENSG00000142182				49	0	0	31	12	27.907
TRPM2	0	genome.wustl.edu	37	21	45855098	45855098	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45855098	45855098	G	A	SNP	TRPM2	ENST00000300482	human	ensembl	74_37	+1	known	silent	c.4059	p.T1353	0.964	superfamily_NUDIX_hydrolase_dom-like	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC	ENSG00000142185				82	0	0	65	18	21.6867
TSPEAR	0	genome.wustl.edu	37	21	45949813	45949813	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45949813	45949813	G	A	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	silent	c.658	p.L220	0.998	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894				36	0	0	28	13	31.7073
TSPEAR	0	genome.wustl.edu	37	21	45950952	45950952	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45950952	45950952	G	A	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	missense	c.607	p.R203W	0.992	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894				50	0	0	32	13	28.8889
KRTAP10-2	0	genome.wustl.edu	37	21	45971168	45971168	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45971168	45971168	G	A	SNP	KRTAP10-2	ENST00000391621	human	ensembl	74_37	-1	known	silent	c.174	p.C58	0.997	NULL	NULL	-	no_errors	KRTAP10-2	HGNC	ENSG00000205445				174	0	0	105	44	29.5302
KRTAP10-4	0	genome.wustl.edu	37	21	45994612	45994612	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	45994612	45994612	T	C	SNP	KRTAP10-4	ENST00000400374	human	ensembl	74_37	+1	known	missense	c.977	p.V326A	0.049	NULL	NULL	-	no_errors	KRTAP10-4	HGNC	ENSG00000215454				376	0	0	236	78	24.8408
ITGB2	0	genome.wustl.edu	37	21	46309915	46309915	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	46309915	46309915	G	A	SNP	ITGB2	ENST00000302347	human	ensembl	74_37	-1	known	silent	c.1635	p.N545	0.000	pirsf_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_tail,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB2	HGNC	ENSG00000160255				79	0	0	62	26	29.5455
ADARB1	0	genome.wustl.edu	37	21	46596126	46596126	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	46596126	46596126	C	T	SNP	ADARB1	ENST00000360697	human	ensembl	74_37	+1	known	silent	c.510	p.A170	0.124	NULL	pfam_A_deamin,pfam_dsRNA-bd_dom,superfamily_Cytokine_IL1-like,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADARB1	HGNC	ENSG00000197381				51	0	0	45	17	27.4194
COL6A1	0	genome.wustl.edu	37	21	47423591	47423591	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	47423591	47423591	C	T	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	silent	c.2751	p.N917	0.001	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156				72	0	0	45	16	26.2295
FTCD	0	genome.wustl.edu	37	21	47571587	47571587	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	47571587	47571587	G	A	SNP	FTCD	ENST00000359679	human	ensembl	74_37	-1	known	missense	c.521	p.T174M	0.998	pfam_Formiminotransferase_N,superfamily_FormiminoTrfase_N/C_subdom,tigrfam_Formiminotransferase_cat	pfam_Formiminotransferase_N,pfam_Formiminotransferase_C,pfam_Cyclodeamin/CycHdrlase,superfamily_FormiminoTrfase_N/C_subdom,superfamily_Cyclodeamin/CycHdrlase,tigrfam_Formiminotransferase_cat	-	no_errors	FTCD	HGNC	ENSG00000160282				109	1	0.909091	77	27	25.9615
PCNT	0	genome.wustl.edu	37	21	47865350	47865350	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	47865350	47865350	G	A	SNP	PCNT	ENST00000480896	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PCNT	HGNC	ENSG00000160299				26	0	0	12	4	25
DIP2A	0	genome.wustl.edu	37	21	47976918	47976918	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	47976918	47976918	C	T	SNP	DIP2A	ENST00000318711	human	ensembl	74_37	+1	known	missense	c.3568	p.R1190W	0.898	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305				15	0	0	8	2	20
PRMT2	0	genome.wustl.edu	37	21	48068533	48068533	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	48068533	48068533	T	C	SNP	PRMT2	ENST00000355680	human	ensembl	74_37	+1	known	splice_site	c.489+2	e4+2	1.000	-	-	-	no_errors	PRMT2	HGNC	ENSG00000160310				140	1	0.70922	101	27	21.0938
ARVCF	0	genome.wustl.edu	37	22	19961779	19961779	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	19961779	19961779	C	T	SNP	ARVCF	ENST00000480792	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARVCF	HGNC	ENSG00000099889				41	0	0	27	7	20.5882
CCDC116	0	genome.wustl.edu	37	22	21989326	21989326	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	21989326	21989326	G	A	SNP	CCDC116	ENST00000292779	human	ensembl	74_37	+1	known	missense	c.974	p.R325H	0.701	NULL	NULL	-	no_errors	CCDC116	HGNC	ENSG00000161180				114	0	0	80	32	28.5714
CCDC116	0	genome.wustl.edu	37	22	21989345	21989345	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	21989345	21989345	C	T	SNP	CCDC116	ENST00000292779	human	ensembl	74_37	+1	known	silent	c.993	p.D331	0.020	NULL	NULL	-	no_errors	CCDC116	HGNC	ENSG00000161180				94	0	0	74	25	25.2525
CABIN1	0	genome.wustl.edu	37	22	24560391	24560391	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	24560391	24560391	C	T	SNP	CABIN1	ENST00000263119	human	ensembl	74_37	+1	known	silent	c.4770	p.D1590	0.992	NULL	pfam_MEF2_binding,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CABIN1	HGNC	ENSG00000099991				172	0	0	100	42	29.5775
SUSD2	0	genome.wustl.edu	37	22	24580158	24580158	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	24580158	24580158	G	A	SNP	SUSD2	ENST00000358321	human	ensembl	74_37	+1	known	missense	c.494	p.R165H	0.051	NULL	pfam_AMOP,pfam_VWF_type-D,pfam_Sushi_SCR_CCP,pfam_Somatomedin_B_dom,superfamily_Sushi_SCR_CCP,superfamily_Ig_E-set,smart_AMOP,smart_VWF_type-D,smart_Sushi_SCR_CCP,pfscan_AMOP,pfscan_Somatomedin_B_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD2	HGNC	ENSG00000099994				181	0	0	106	42	28.3784
SGSM1	0	genome.wustl.edu	37	22	25294248	25294248	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	25294248	25294248	G	A	SNP	SGSM1	ENST00000400359	human	ensembl	74_37	+1	known	missense	c.2497	p.V833M	0.952	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM1	HGNC	ENSG00000167037				65	0	0	28	14	33.3333
HPS4	0	genome.wustl.edu	37	22	26862218	26862218	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	26862218	26862218	G	A	SNP	HPS4	ENST00000398141	human	ensembl	74_37	-1	known	missense	c.665	p.T222M	0.000	NULL	NULL	-	no_errors	HPS4	HGNC	ENSG00000100099				55	0	0	34	17	33.3333
NIPSNAP1	0	genome.wustl.edu	37	22	29956813	29956813	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	29956813	29956813	G	A	SNP	NIPSNAP1	ENST00000216121	human	ensembl	74_37	-1	known	missense	c.616	p.R206W	1.000	pfam_NIPSNAP,superfamily_Dimeric_a/b-barrel	pfam_NIPSNAP,superfamily_Dimeric_a/b-barrel	-	no_errors	NIPSNAP1	HGNC	ENSG00000184117				191	0	0	119	34	22.2222
SLC35E4	0	genome.wustl.edu	37	22	31042594	31042594	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	31042594	31042594	T	G	SNP	SLC35E4	ENST00000343605	human	ensembl	74_37	+1	known	missense	c.629	p.L210R	1.000	pfam_Tpt_PEP_trans_dom,pfam_UAA	pfam_Tpt_PEP_trans_dom,pfam_DMT,pfam_UAA	-	no_errors	SLC35E4	HGNC	ENSG00000100036				97	0	0	46	22	32.3529
OSBP2	0	genome.wustl.edu	37	22	31285625	31285625	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	31285625	31285625	T	C	SNP	OSBP2	ENST00000332585	human	ensembl	74_37	+1	known	splice_site	c.1623+2	e7+2	1.000	-	-	-	no_errors	OSBP2	HGNC	ENSG00000184792				166	0	0	109	37	25.3425
NCF4	0	genome.wustl.edu	37	22	37266489	37266489	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	37266489	37266489	G	T	SNP	NCF4	ENST00000397147	human	ensembl	74_37	+1	known	missense	c.375	p.M125I	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain,prints_NCF_P40,prints_p67phox	-	no_errors	NCF4	HGNC	ENSG00000100365				87	0	0	76	5	6.17284
MICALL1	0	genome.wustl.edu	37	22	38322027	38322027	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	38322027	38322027	G	A	SNP	MICALL1	ENST00000215957	human	ensembl	74_37	+1	known	missense	c.1442	p.R481H	0.045	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL1	HGNC	ENSG00000100139				65	0	0	19	25	56.8182
KCNJ4	0	genome.wustl.edu	37	22	38823826	38823826	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	38823826	38823826	G	A	SNP	KCNJ4	ENST00000303592	human	ensembl	74_37	-1	known	silent	c.312	p.G104	0.066	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.3	-	no_errors	KCNJ4	HGNC	ENSG00000168135				61	0	0	22	23	51.1111
KCNJ4	0	genome.wustl.edu	37	22	38824116	38824116	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	38824116	38824116	C	T	SNP	KCNJ4	ENST00000303592	human	ensembl	74_37	-1	known	missense	c.22	p.G8S	1.000	pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.3	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.3	-	no_errors	KCNJ4	HGNC	ENSG00000168135				398	1	0.250627	170	165	49.2537
MIEF1	0	genome.wustl.edu	37	22	39907950	39907950	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	39907950	39907950	C	T	SNP	MIEF1	ENST00000325301	human	ensembl	74_37	+1	known	nonsense	c.241	p.R81*	1.000	NULL	NULL	-	no_errors	MIEF1	HGNC	ENSG00000100335				223	0	0	104	101	49.2683
CYP2D6	0	genome.wustl.edu	37	22	42522946	42522946	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	42522946	42522946	C	T	SNP	CYP2D6	ENST00000360608	human	ensembl	74_37	-1	known	missense	c.1222	p.V408I	0.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2D-like,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2D-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2D6	HGNC	ENSG00000100197				15	0	0	9	3	25
CYP2D6	0	genome.wustl.edu	37	22	42523459	42523459	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	42523459	42523459	C	T	SNP	CYP2D6	ENST00000360608	human	ensembl	74_37	-1	known	missense	c.1163	p.R388H	0.983	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2D-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2D6	HGNC	ENSG00000100197				87	0	0	75	5	6.25
CYP2D6	0	genome.wustl.edu	37	22	42526712	42526712	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	42526712	42526712	G	A	SNP	CYP2D6	ENST00000360608	human	ensembl	74_37	-1	known	missense	c.82	p.R28C	0.914	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2D-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2D6	HGNC	ENSG00000100197				26	0	0	17	7	29.1667
TTLL1	0	genome.wustl.edu	37	22	43447858	43447858	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	43447858	43447858	G	A	SNP	TTLL1	ENST00000266254	human	ensembl	74_37	-1	known	silent	c.927	p.C309	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL1	HGNC	ENSG00000100271				126	0	0	51	44	46.3158
KIAA0930	0	genome.wustl.edu	37	22	45601544	45601544	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	45601544	45601544	G	A	SNP	KIAA0930	ENST00000251993	human	ensembl	74_37	-1	known	silent	c.396	p.G132	0.010	pfam_DUF2045	pfam_DUF2045	-	no_errors	KIAA0930	HGNC	ENSG00000100364				104	0	0	45	43	48.8636
PKDREJ	0	genome.wustl.edu	37	22	46655628	46655628	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	46655628	46655628	C	T	SNP	PKDREJ	ENST00000253255	human	ensembl	74_37	-1	known	missense	c.3592	p.V1198M	0.000	NULL	pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_Ion_trans_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,prints_PKD_2	-	no_errors	PKDREJ	HGNC	ENSG00000130943				175	0	0	73	71	49.3056
TTLL8	0	genome.wustl.edu	37	22	50472806	50472806	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	50472806	50472806	G	A	SNP	TTLL8	ENST00000266182	human	ensembl	74_37	-1	known	missense	c.1007	p.A336V	0.802	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL8	HGNC	ENSG00000138892				51	0	0	27	4	12.9032
PANX2	0	genome.wustl.edu	37	22	50615416	50615416	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	50615416	50615416	C	T	SNP	PANX2	ENST00000395842	human	ensembl	74_37	+1	known	missense	c.275	p.A92V	1.000	pfam_Innexin,pfscan_Innexin	pfam_Innexin,pfscan_Innexin	-	no_errors	PANX2	HGNC	ENSG00000073150				23	0	0	12	15	55.5556
TRABD	0	genome.wustl.edu	37	22	50636357	50636357	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	50636357	50636357	C	T	SNP	TRABD	ENST00000303434	human	ensembl	74_37	+1	known	silent	c.777	p.R259	0.717	pfam_Pheromone_shutdown_TraB	pfam_Pheromone_shutdown_TraB	-	no_errors	TRABD	HGNC	ENSG00000170638				206	0	0	79	70	46.9799
TUBGCP6	0	genome.wustl.edu	37	22	50682481	50682481	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	50682481	50682481	G	A	SNP	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	silent	c.408	p.N136	0.996	NULL	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159				90	0	0	36	33	47.8261
HDAC10	0	genome.wustl.edu	37	22	50684142	50684142	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	50684142	50684142	G	T	SNP	HDAC10	ENST00000216271	human	ensembl	74_37	-1	known	missense	c.1948	p.L650M	0.031	NULL	pfam_His_deacetylse_dom,prints_His_deacetylse	-	no_errors	HDAC10	HGNC	ENSG00000100429				48	0	0	37	5	11.9048
RABL2B	0	genome.wustl.edu	37	22	51214269	51214269	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	51214269	51214269	G	A	SNP	RABL2B	ENST00000354869	human	ensembl	74_37	-1	known	silent	c.228	p.D76	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RABL2B	HGNC	ENSG00000079974				114	0	0	44	23	34.3284
TBC1D23	0	genome.wustl.edu	37	3	100020960	100020960	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	100020960	100020960	A	G	SNP	TBC1D23	ENST00000394144	human	ensembl	74_37	+1	known	missense	c.1142	p.E381G	1.000	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	pfam_Rab-GTPase-TBC_dom,pfam_Rhodanese-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBC1D23	HGNC	ENSG00000036054				60	0	0	40	10	20
NIT2	0	genome.wustl.edu	37	3	100071247	100071247	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	100071247	100071247	G	A	SNP	NIT2	ENST00000394140	human	ensembl	74_37	+1	known	splice_site	c.585-1	e8-1	1.000	-	-	-	no_errors	NIT2	HGNC	ENSG00000114021				147	0	0	71	24	25.2632
ZBTB11	0	genome.wustl.edu	37	3	101389993	101389993	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	101389993	101389993	C	A	SNP	ZBTB11	ENST00000312938	human	ensembl	74_37	-1	known	missense	c.759	p.E253D	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB11	HGNC	ENSG00000066422				68	0	0	43	6	12.2449
SLC35A5	0	genome.wustl.edu	37	3	112299461	112299461	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	112299461	112299461	C	T	SNP	SLC35A5	ENST00000492406	human	ensembl	74_37	+1	known	missense	c.497	p.A166V	0.006	pfam_Nuc_sug_transpt,pfam_UAA,pirsf_UDP/CMP-sugar_transptr	pfam_Nuc_sug_transpt,pfam_UAA,pfam_DMT,pfam_Tpt_PEP_trans_dom,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	-	no_errors	SLC35A5	HGNC	ENSG00000138459				65	0	0	47	15	24.1935
SLC35A5	0	genome.wustl.edu	37	3	112300135	112300135	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	112300135	112300135	C	T	SNP	SLC35A5	ENST00000492406	human	ensembl	74_37	+1	known	nonsense	c.1171	p.R391*	0.845	pirsf_UDP/CMP-sugar_transptr	pfam_Nuc_sug_transpt,pfam_UAA,pfam_DMT,pfam_Tpt_PEP_trans_dom,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	-	no_errors	SLC35A5	HGNC	ENSG00000138459				76	0	0	64	6	8.57143
FSTL1	0	genome.wustl.edu	37	3	120121742	120121742	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	120121742	120121742	A	G	SNP	FSTL1	ENST00000295633	human	ensembl	74_37	-1	known	missense	c.718	p.Y240H	0.734	NULL	pfam_Kazal_dom,pfam_Follistatin/Osteonectin_EGF,smart_Fol_N,smart_Kazal_dom,pfscan_EF_hand_dom	-	no_errors	FSTL1	HGNC	ENSG00000163430				148	0	0	94	28	22.9508
FBXO40	0	genome.wustl.edu	37	3	121340509	121340509	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	121340509	121340509	G	A	SNP	FBXO40	ENST00000338040	human	ensembl	74_37	+1	known	missense	c.233	p.R78H	1.000	superfamily_TRAF-like,pfscan_Znf_TRAF	superfamily_F-box_dom,superfamily_TRAF-like,pfscan_F-box_dom,pfscan_Znf_TRAF	-	no_errors	FBXO40	HGNC	ENSG00000163833				129	0	0	79	28	26.1682
FBXO40	0	genome.wustl.edu	37	3	121341390	121341390	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	121341390	121341390	C	T	SNP	FBXO40	ENST00000338040	human	ensembl	74_37	+1	known	missense	c.1114	p.P372S	1.000	NULL	superfamily_F-box_dom,superfamily_TRAF-like,pfscan_F-box_dom,pfscan_Znf_TRAF	-	no_errors	FBXO40	HGNC	ENSG00000163833				110	0	0	71	21	22.8261
KPNA1	0	genome.wustl.edu	37	3	122145775	122145775	+	RNA	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	122145775	122145775	A	C	SNP	KPNA1	ENST00000466923	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KPNA1	HGNC	ENSG00000114030				26	0	0	17	2	10.5263
SEMA5B	0	genome.wustl.edu	37	3	122632217	122632217	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	122632217	122632217	A	G	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.2497	p.W833R	0.998	NULL	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				15	0	0	12	3	20
SEMA5B	0	genome.wustl.edu	37	3	122632729	122632729	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	122632729	122632729	C	T	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.2270	p.C757Y	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				132	0	0	83	25	23.1481
SEMA5B	0	genome.wustl.edu	37	3	122632812	122632812	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	122632812	122632812	C	A	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	silent	c.2187	p.L729	0.985	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				114	0	0	84	9	9.67742
SEMA5B	0	genome.wustl.edu	37	3	122680142	122680142	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	122680142	122680142	C	T	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.131	p.G44D	0.001	NULL	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684				69	0	0	52	15	22.3881
PDIA5	0	genome.wustl.edu	37	3	122864994	122864994	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	122864994	122864994	G	A	SNP	PDIA5	ENST00000316218	human	ensembl	74_37	+1	known	missense	c.1030	p.A344T	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,prints_Thioredoxin	-	no_errors	PDIA5	HGNC	ENSG00000065485				251	0	0	155	44	22.1106
ADCY5	0	genome.wustl.edu	37	3	123021992	123021992	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	123021992	123021992	C	T	SNP	ADCY5	ENST00000462833	human	ensembl	74_37	-1	known	silent	c.2634	p.A878	0.075	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY5	HGNC	ENSG00000173175				73	0	0	39	19	32.7586
PLXNA1	0	genome.wustl.edu	37	3	126741039	126741039	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	126741039	126741039	C	T	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.4150	p.R1384C	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				52	0	0	28	13	31.7073
PLXNA1	0	genome.wustl.edu	37	3	126751418	126751418	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	126751418	126751418	C	T	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.5420	p.P1807L	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				101	0	0	60	30	33.3333
C3orf56	0	genome.wustl.edu	37	3	126915571	126915571	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	126915571	126915571	C	T	SNP	C3orf56	ENST00000398112	human	ensembl	74_37	+1	known	missense	c.43	p.R15C	0.000	NULL	NULL	-	no_errors	C3orf56	HGNC	ENSG00000214324				29	0	0	30	7	18.9189
PODXL2	0	genome.wustl.edu	37	3	127390358	127390358	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	127390358	127390358	G	A	SNP	PODXL2	ENST00000342480	human	ensembl	74_37	+1	known	missense	c.1507	p.V503M	1.000	pfam_CD34/Podocalyxin	pfam_CD34/Podocalyxin	-	no_errors	PODXL2	HGNC	ENSG00000114631				136	0	0	76	23	23.2323
EEFSEC	0	genome.wustl.edu	37	3	128126962	128126962	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	128126962	128126962	C	T	SNP	EEFSEC	ENST00000254730	human	ensembl	74_37	+1	known	missense	c.1651	p.R551W	0.988	NULL	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EEFSEC	HGNC	ENSG00000132394				72	0	0	33	14	29.7872
CAND2	0	genome.wustl.edu	37	3	12856866	12856866	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	12856866	12856866	G	T	SNP	CAND2	ENST00000456430	human	ensembl	74_37	+1	known	missense	c.1233	p.K411N	0.049	superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND2	HGNC	ENSG00000144712				94	0	0	54	16	22.8571
GP9	0	genome.wustl.edu	37	3	128780857	128780857	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	128780857	128780857	G	A	SNP	GP9	ENST00000307395	human	ensembl	74_37	+1	known	missense	c.275	p.S92N	0.370	smart_Cys-rich_flank_reg_C	pfam_LRR-contain_N,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C	-	no_errors	GP9	HGNC	ENSG00000169704				87	0	0	45	25	35.7143
COL6A6	0	genome.wustl.edu	37	3	130287203	130287203	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	130287203	130287203	G	A	SNP	COL6A6	ENST00000358511	human	ensembl	74_37	+1	known	missense	c.2156	p.R719Q	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384				132	0	0	56	18	24.3243
MRPL3	0	genome.wustl.edu	37	3	131206557	131206557	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	131206557	131206557	C	T	SNP	MRPL3	ENST00000264995	human	ensembl	74_37	-1	known	missense	c.596	p.R199H	1.000	pfam_Ribosomal_L3,superfamily_Transl_B-barrel,tigrfam_Ribosomal_L3_bac/org-type	pfam_Ribosomal_L3,superfamily_Transl_B-barrel,tigrfam_Ribosomal_L3_bac/org-type	-	no_errors	MRPL3	HGNC	ENSG00000114686				79	0	0	36	22	37.931
DNAJC13	0	genome.wustl.edu	37	3	132184898	132184898	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	132184898	132184898	T	C	SNP	DNAJC13	ENST00000260818	human	ensembl	74_37	+1	known	missense	c.1952	p.L651S	1.000	superfamily_ARM-type_fold	pfam_DnaJ_domain,superfamily_ARM-type_fold,superfamily_GYF,smart_DnaJ_domain,pfscan_DnaJ_domain	-	no_errors	DNAJC13	HGNC	ENSG00000138246				56	0	0	27	9	25
TF	0	genome.wustl.edu	37	3	133475800	133475800	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	133475800	133475800	C	T	SNP	TF	ENST00000402696	human	ensembl	74_37	+1	known	nonsense	c.817	p.R273*	0.998	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	TF	HGNC	ENSG00000091513				156	1	0.636943	76	20	20.8333
HDAC11	0	genome.wustl.edu	37	3	13546059	13546059	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	13546059	13546059	G	A	SNP	HDAC11	ENST00000295757	human	ensembl	74_37	+1	known	missense	c.920	p.R307H	0.999	pfam_His_deacetylse_dom	pfam_His_deacetylse_dom,prints_His_deacetylse	-	no_errors	HDAC11	HGNC	ENSG00000163517				118	0	0	65	13	16.6667
FBLN2	0	genome.wustl.edu	37	3	13612417	13612417	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	13612417	13612417	G	A	SNP	FBLN2	ENST00000404922	human	ensembl	74_37	+1	known	missense	c.562	p.D188N	0.971	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_EG-like_dom,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd_dom,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520				44	0	0	28	5	15.1515
U2SURP	0	genome.wustl.edu	37	3	142741774	142741774	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	142741774	142741774	G	A	SNP	U2SURP	ENST00000473835	human	ensembl	74_37	+1	known	silent	c.1098	p.P366	0.117	NULL	pfam_Surp,pfam_RRM_dom,superfamily_Surp,superfamily_ENTH_VHS,smart_RRM_dom,smart_Surp,smart_CID_dom,pfscan_Surp,pfscan_RRM_dom	-	no_errors	U2SURP	HGNC	ENSG00000163714				26	0	0	17	3	15
GRIP2	0	genome.wustl.edu	37	3	14563212	14563212	+	RNA	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	14563212	14563212	C	A	SNP	GRIP2	ENST00000273083	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRIP2	HGNC	ENSG00000144596				28	0	0	20	4	16.6667
WDR49	0	genome.wustl.edu	37	3	167319962	167319962	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	167319962	167319962	G	T	SNP	WDR49	ENST00000308378	human	ensembl	74_37	-1	known	missense	c.205	p.Q69K	0.994	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR49	HGNC	ENSG00000174776				94	0	0	68	17	20
GPR160	0	genome.wustl.edu	37	3	169802628	169802628	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	169802628	169802628	A	G	SNP	GPR160	ENST00000355897	human	ensembl	74_37	+1	known	missense	c.868	p.T290A	0.006	pfscan_GPCR_Rhodpsn_7TM	pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR160	HGNC	ENSG00000173890				108	0	0	53	29	35.3659
TNIK	0	genome.wustl.edu	37	3	170857277	170857277	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	170857277	170857277	A	G	SNP	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	silent	c.1401	p.H467	1.000	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310				133	0	0	73	30	29.1262
PLD1	0	genome.wustl.edu	37	3	171320972	171320972	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	171320972	171320972	G	A	SNP	PLD1	ENST00000351298	human	ensembl	74_37	-1	known	missense	c.3121	p.R1041C	1.000	pirsf_PLipase_D_euk	pfam_Phox,pfam_PLipase_D/transphosphatidylase,pfam_Pleckstrin_homology,superfamily_Phox,smart_Phox,smart_Pleckstrin_homology,smart_PLipase_D/transphosphatidylase,pirsf_PLipase_D_euk,pfscan_Phox,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD1	HGNC	ENSG00000075651				69	0	0	38	11	22.449
SPATA16	0	genome.wustl.edu	37	3	172834946	172834946	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	172834946	172834946	G	A	SNP	SPATA16	ENST00000351008	human	ensembl	74_37	-1	known	silent	c.576	p.Y192	0.161	NULL	NULL	-	no_errors	SPATA16	HGNC	ENSG00000144962				146	0	0	90	23	20.354
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879				77	0	0	48	12	20
HTR3E	0	genome.wustl.edu	37	3	183823105	183823105	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	183823105	183823105	G	A	SNP	HTR3E	ENST00000335304	human	ensembl	74_37	+1	known	missense	c.655	p.A219T	0.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Neur_channel	-	no_errors	HTR3E	HGNC	ENSG00000186038				68	0	0	37	15	28.8462
ABCF3	0	genome.wustl.edu	37	3	183905683	183905683	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	183905683	183905683	A	G	SNP	ABCF3	ENST00000429586	human	ensembl	74_37	+1	known	missense	c.481	p.S161G	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF3	HGNC	ENSG00000161204				139	0	0	76	22	22.449
SATB1	0	genome.wustl.edu	37	3	18393520	18393520	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	18393520	18393520	C	T	SNP	SATB1	ENST00000417717	human	ensembl	74_37	-1	known	silent	c.1743	p.P581	0.705	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	SATB1	HGNC	ENSG00000182568				136	0	0	86	32	27.1186
EIF4G1	0	genome.wustl.edu	37	3	184045702	184045702	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	184045702	184045702	C	T	SNP	EIF4G1	ENST00000352767	human	ensembl	74_37	+1	known	missense	c.3886	p.R1296C	1.000	pfam_Initiation_fac_eIF4g_MI,superfamily_ARM-type_fold,smart_Initiation_fac_eIF4g_MI	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G1	HGNC	ENSG00000114867				127	0	0	85	36	29.7521
THPO	0	genome.wustl.edu	37	3	184093761	184093761	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	184093761	184093761	G	A	SNP	THPO	ENST00000204615	human	ensembl	74_37	-1	known	missense	c.56	p.T19M	0.981	pfam_EPO_TPO,prints_Thrombopoeitin	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,prints_Thrombopoeitin	-	no_errors	THPO	HGNC	ENSG00000090534				78	0	0	49	13	20.9677
MAP3K13	0	genome.wustl.edu	37	3	185198156	185198156	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	185198156	185198156	C	T	SNP	MAP3K13	ENST00000265026	human	ensembl	74_37	+1	known	missense	c.2638	p.R880C	0.995	pirsf_MAP3K12_MAP3K13	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K13	HGNC	ENSG00000073803				102	0	0	59	23	28.0488
EIF4A2	0	genome.wustl.edu	37	3	186504345	186504345	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	186504345	186504345	T	A	SNP	EIF4A2	ENST00000440191	human	ensembl	74_37	+1	known	missense	c.685	p.F229I	1.000	superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	EIF4A2	HGNC	ENSG00000156976				62	0	0	38	12	24
XXYLT1	0	genome.wustl.edu	37	3	194790465	194790465	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	194790465	194790465	G	A	SNP	XXYLT1	ENST00000310380	human	ensembl	74_37	-1	known	silent	c.1161	p.N387	1.000	NULL	pfam_Glyco_trans_8	-	no_errors	XXYLT1	HGNC	ENSG00000173950				145	0	0	71	23	24.4681
MUC4	0	genome.wustl.edu	37	3	195511156	195511156	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	195511156	195511156	C	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.7295	p.R2432H	0.142	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				19	0	0	13	3	18.75
TNK2	0	genome.wustl.edu	37	3	195593775	195593775	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	195593775	195593775	C	T	SNP	TNK2	ENST00000381916	human	ensembl	74_37	-1	known	missense	c.3239	p.G1080D	1.000	superfamily_UBA-like	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	TNK2	HGNC	ENSG00000061938				28	0	0	26	2	7.14286
TFRC	0	genome.wustl.edu	37	3	195800860	195800860	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	195800860	195800860	A	G	SNP	TFRC	ENST00000360110	human	ensembl	74_37	-1	known	silent	c.375	p.D125	0.072	NULL	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	TFRC	HGNC	ENSG00000072274				57	0	0	32	14	30.4348
PIGZ	0	genome.wustl.edu	37	3	196675210	196675210	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	196675210	196675210	C	T	SNP	PIGZ	ENST00000443835	human	ensembl	74_37	-1	putative	missense	c.248	p.R83H	0.035	NULL	pfam_GPI_mannosylTrfase	-	no_errors	PIGZ	HGNC	ENSG00000119227				136	0	0	59	16	21.3333
LRCH3	0	genome.wustl.edu	37	3	197553754	197553754	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	197553754	197553754	G	A	SNP	LRCH3	ENST00000438796	human	ensembl	74_37	+1	known	missense	c.646	p.A216T	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_CH-domain,superfamily_CH-domain,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH3	HGNC	ENSG00000186001				69	0	0	56	25	30.8642
SLC4A7	0	genome.wustl.edu	37	3	27460061	27460061	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	27460061	27460061	T	A	SNP	SLC4A7	ENST00000454389	human	ensembl	74_37	-1	known	missense	c.1575	p.E525D	0.999	pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A7	HGNC	ENSG00000033867				36	0	0	28	7	20
DYNC1LI1	0	genome.wustl.edu	37	3	32574559	32574559	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	32574559	32574559	T	C	SNP	DYNC1LI1	ENST00000273130	human	ensembl	74_37	-1	known	missense	c.999	p.I333M	1.000	pfam_Dynein_light_int_chain	pfam_Dynein_light_int_chain,superfamily_P-loop_NTPase	-	no_errors	DYNC1LI1	HGNC	ENSG00000144635				40	0	0	32	6	15.7895
STAC	0	genome.wustl.edu	37	3	36534721	36534721	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	36534721	36534721	G	T	SNP	STAC	ENST00000273183	human	ensembl	74_37	+1	known	missense	c.766	p.V256L	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_SH3_domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	STAC	HGNC	ENSG00000144681				93	0	0	45	20	30.7692
DCLK3	0	genome.wustl.edu	37	3	36779171	36779171	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	36779171	36779171	G	A	SNP	DCLK3	ENST00000416516	human	ensembl	74_37	-1	known	missense	c.980	p.T327M	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK3	HGNC	ENSG00000163673				169	0	0	103	30	22.5564
TRANK1	0	genome.wustl.edu	37	3	36872364	36872364	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	36872364	36872364	C	T	SNP	TRANK1	ENST00000429976	human	ensembl	74_37	-1	known	missense	c.8578	p.A2860T	0.996	NULL	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom	-	no_errors	TRANK1	HGNC	ENSG00000168016				69	0	0	39	19	32.7586
PLCD1	0	genome.wustl.edu	37	3	38051523	38051523	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	38051523	38051523	G	A	SNP	PLCD1	ENST00000463876	human	ensembl	74_37	-1	known	silent	c.1222	p.L408	1.000	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD1	HGNC	ENSG00000187091				95	0	0	63	18	22.2222
SCN10A	0	genome.wustl.edu	37	3	38781010	38781010	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	38781010	38781010	C	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.2276	p.R759H	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				74	0	0	51	12	19.0476
LRRN1	0	genome.wustl.edu	37	3	3888033	3888033	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	3888033	3888033	T	C	SNP	LRRN1	ENST00000319331	human	ensembl	74_37	+1	known	missense	c.1708	p.Y570H	0.997	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN1	HGNC	ENSG00000175928				344	1	0.289855	223	73	24.6622
TTC21A	0	genome.wustl.edu	37	3	39171645	39171645	+	RNA	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	39171645	39171645	A	G	SNP	TTC21A	ENST00000466875	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	TTC21A	HGNC	ENSG00000168026				30	0	0	15	6	28.5714
CHL1	0	genome.wustl.edu	37	3	436506	436506	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	436506	436506	G	T	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.3045	p.Q1015H	0.125	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121				80	0	0	45	10	18.1818
PLXNB1	0	genome.wustl.edu	37	3	48455445	48455445	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	48455445	48455445	C	A	SNP	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	missense	c.4245	p.E1415D	1.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050				99	0	0	29	17	36.9565
RBM5	0	genome.wustl.edu	37	3	50129622	50129622	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	50129622	50129622	G	A	SNP	RBM5	ENST00000347869	human	ensembl	74_37	+1	known	missense	c.164	p.R55Q	1.000	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM5	HGNC	ENSG00000003756				60	0	0	21	13	38.2353
NAT6	0	genome.wustl.edu	37	3	50334626	50334626	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	50334626	50334626	C	T	SNP	NAT6	ENST00000354862	human	ensembl	74_37	-1	known	missense	c.335	p.R112H	1.000	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAT6	HGNC	ENSG00000243477				125	0	0	49	21	30
GRM2	0	genome.wustl.edu	37	3	51743432	51743432	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	51743432	51743432	A	G	SNP	GRM2	ENST00000395052	human	ensembl	74_37	+1	known	missense	c.433	p.S145G	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_GABA_rcpt_B	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM2	HGNC	ENSG00000164082				23	0	0	11	7	38.8889
RRP9	0	genome.wustl.edu	37	3	51969657	51969657	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	51969657	51969657	G	A	SNP	RRP9	ENST00000232888	human	ensembl	74_37	-1	known	missense	c.787	p.R263C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RRP9	HGNC	ENSG00000114767				89	0	0	43	20	31.746
DNAH1	0	genome.wustl.edu	37	3	52425268	52425268	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	52425268	52425268	G	A	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.9815	p.R3272H	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841				41	0	0	16	10	38.4615
CACNA1D	0	genome.wustl.edu	37	3	53845218	53845218	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	53845218	53845218	G	A	SNP	CACNA1D	ENST00000288139	human	ensembl	74_37	+1	known	missense	c.6331	p.A2111T	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388				130	0	0	58	30	34.0909
CACNA2D3	0	genome.wustl.edu	37	3	54905647	54905647	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	54905647	54905647	G	A	SNP	CACNA2D3	ENST00000288197	human	ensembl	74_37	+1	known	missense	c.1708	p.V570M	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445				96	0	0	76	14	15.5556
PXK	0	genome.wustl.edu	37	3	58410518	58410518	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	58410518	58410518	C	A	SNP	PXK	ENST00000356151	human	ensembl	74_37	+1	known	missense	c.1568	p.P523Q	1.000	NULL	pfam_Phox,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Phox,superfamily_Kinase-like_dom,smart_Phox,pfscan_Phox,pfscan_WH2_dom,pfscan_Prot_kinase_dom	-	no_errors	PXK	HGNC	ENSG00000168297				54	0	0	35	11	23.913
FEZF2	0	genome.wustl.edu	37	3	62358181	62358181	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	62358181	62358181	G	A	SNP	FEZF2	ENST00000283268	human	ensembl	74_37	-1	known	silent	c.363	p.C121	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	FEZF2	HGNC	ENSG00000153266				11	0	0	6	4	40
CADPS	0	genome.wustl.edu	37	3	62860297	62860297	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	62860297	62860297	C	T	SNP	CADPS	ENST00000383710	human	ensembl	74_37	-1	known	silent	c.408	p.K136	1.000	NULL	pfam_Ca-dep_secretion_activator,superfamily_C2_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS	HGNC	ENSG00000163618				14	0	0	1	3	75
MAGI1	0	genome.wustl.edu	37	3	65415259	65415259	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	65415259	65415259	T	G	SNP	MAGI1	ENST00000402939	human	ensembl	74_37	-1	known	missense	c.2103	p.Q701H	0.652	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI1	HGNC	ENSG00000151276				132	0	0	78	29	27.1028
MITF	0	genome.wustl.edu	37	3	70008489	70008489	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	70008489	70008489	G	A	SNP	MITF	ENST00000448226	human	ensembl	74_37	+1	known	missense	c.1097	p.R366Q	1.000	superfamily_bHLH_dom,smart_bHLH_dom	pfam_bHLH_ZIP_TF_MiT/TFE,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MITF	HGNC	ENSG00000187098				60	0	0	38	6	13.6364
THUMPD3	0	genome.wustl.edu	37	3	9426301	9426301	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	9426301	9426301	A	G	SNP	THUMPD3	ENST00000345094	human	ensembl	74_37	+1	known	missense	c.1453	p.T485A	0.995	NULL	pfam_RNA_methylase_dom,pfam_THUMP,smart_THUMP,pfscan_THUMP	-	no_errors	THUMPD3	HGNC	ENSG00000134077				192	0	0	115	35	23.3333
FILIP1L	0	genome.wustl.edu	37	3	99568682	99568682	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	99568682	99568682	T	A	SNP	FILIP1L	ENST00000354552	human	ensembl	74_37	-1	known	missense	c.1838	p.K613I	0.987	NULL	pfam_Cortactin-binding_p2_N,superfamily_Prefoldin,prints_Tropomyosin	-	no_errors	FILIP1L	HGNC	ENSG00000168386				106	0	0	50	21	29.5775
DKK2	0	genome.wustl.edu	37	4	107956720	107956720	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	107956720	107956720	G	A	SNP	DKK2	ENST00000285311	human	ensembl	74_37	-1	novel	missense	c.29	p.S10L	0.949	NULL	pfam_Dickkopf_N,superfamily_Zn2-C6_fun-type_DNA-bd	-	no_errors	DKK2	HGNC	ENSG00000155011				187	0	0	101	35	25.7353
ALPK1	0	genome.wustl.edu	37	4	113351602	113351602	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	113351602	113351602	A	G	SNP	ALPK1	ENST00000177648	human	ensembl	74_37	+1	known	splice_site	c.901-2	e9-2	1.000	-	-	-	no_errors	ALPK1	HGNC	ENSG00000073331				57	0	0	34	7	17.0732
ANK2	0	genome.wustl.edu	37	4	114213628	114213628	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	114213628	114213628	C	T	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	silent	c.2334	p.N778	0.982	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				38	0	0	23	5	17.8571
SNHG8	0	genome.wustl.edu	37	4	119200510	119200510	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	119200510	119200510	G	A	SNP	SNHG8	ENST00000602573	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG8	HGNC	ENSG00000269893				42	0	0	24	8	25
CRIPAK	0	genome.wustl.edu	37	4	1388513	1388513	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	1388513	1388513	G	A	SNP	CRIPAK	ENST00000324803	human	ensembl	74_37	+1	known	missense	c.214	p.V72M	0.030	NULL	smart_Post-SET_dom	-	no_errors	CRIPAK	HGNC	ENSG00000179979				1311	0	0	961	142	12.874
NAA15	0	genome.wustl.edu	37	4	140291398	140291398	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	140291398	140291398	G	A	SNP	NAA15	ENST00000296543	human	ensembl	74_37	+1	known	missense	c.1787	p.R596H	1.000	pirsf_NatA_aux_su	pfam_NatA_aux_su,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA15	HGNC	ENSG00000164134				12	0	0	9	4	30.7692
NR3C2	0	genome.wustl.edu	37	4	149356340	149356340	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	149356340	149356340	T	G	SNP	NR3C2	ENST00000355292	human	ensembl	74_37	-1	known	missense	c.1673	p.E558A	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR3C2	HGNC	ENSG00000151623				104	0	0	59	23	28.0488
FSTL5	0	genome.wustl.edu	37	4	163032485	163032485	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	163032485	163032485	G	A	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	missense	c.64	p.P22S	1.000	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843				92	0	0	63	24	27.5862
TMEM192	0	genome.wustl.edu	37	4	166022023	166022023	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	166022023	166022023	A	G	SNP	TMEM192	ENST00000306480	human	ensembl	74_37	-1	known	missense	c.196	p.F66L	0.999	NULL	NULL	-	no_errors	TMEM192	HGNC	ENSG00000170088				30	0	0	21	7	25
TLL1	0	genome.wustl.edu	37	4	166935620	166935620	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	166935620	166935620	G	A	SNP	TLL1	ENST00000061240	human	ensembl	74_37	+1	known	missense	c.950	p.R317H	1.000	pfam_Peptidase_M12A,pirsf_BMP_1/tolloid-like	pfam_CUB_dom,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,smart_Peptidase_Metallo,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_BMP_1/tolloid-like,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Peptidase_M12A	-	no_errors	TLL1	HGNC	ENSG00000038295				235	0	0	134	42	23.8636
CLCN3	0	genome.wustl.edu	37	4	170613412	170613412	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	170613412	170613412	G	A	SNP	CLCN3	ENST00000347613	human	ensembl	74_37	+1	known	missense	c.877	p.G293R	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-3	-	no_errors	CLCN3	HGNC	ENSG00000109572				142	0	0	78	29	27.1028
NCAPG	0	genome.wustl.edu	37	4	17835966	17835966	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	17835966	17835966	G	T	SNP	NCAPG	ENST00000251496	human	ensembl	74_37	+1	known	missense	c.1929	p.K643N	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	NCAPG	HGNC	ENSG00000109805				30	0	0	22	7	24.1379
STOX2	0	genome.wustl.edu	37	4	184931728	184931728	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	184931728	184931728	C	A	SNP	STOX2	ENST00000308497	human	ensembl	74_37	+1	known	silent	c.1737	p.P579	0.017	NULL	pfam_Storkhead-box_winged-helix	-	no_errors	STOX2	HGNC	ENSG00000173320				51	0	0	36	14	28
SORBS2	0	genome.wustl.edu	37	4	186544971	186544971	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	186544971	186544971	C	T	SNP	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	missense	c.1600	p.V534I	0.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556				107	0	0	65	22	25.2874
SLIT2	0	genome.wustl.edu	37	4	20597433	20597433	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	20597433	20597433	C	T	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.3296	p.T1099M	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				160	0	0	82	34	29.3103
ZNF876P	0	genome.wustl.edu	37	4	247388	247388	+	RNA	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	247388	247388	A	G	SNP	ZNF876P	ENST00000356347	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ZNF876P	HGNC	ENSG00000198155				43	0	0	16	7	30.4348
MFSD10	0	genome.wustl.edu	37	4	2933849	2933849	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	2933849	2933849	G	A	SNP	MFSD10	ENST00000329687	human	ensembl	74_37	-1	known	missense	c.725	p.A242V	0.058	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD10	HGNC	ENSG00000109736				35	0	0	31	7	18.4211
RGS12	0	genome.wustl.edu	37	4	3417807	3417807	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	3417807	3417807	C	T	SNP	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	missense	c.2386	p.R796C	0.823	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788				69	0	0	36	11	23.4043
HGFAC	0	genome.wustl.edu	37	4	3444828	3444828	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	3444828	3444828	G	A	SNP	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	missense	c.350	p.R117H	1.000	pirsf_Coagulation_fac_XIIa/HGFA,pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758				33	0	0	20	11	35.4839
HGFAC	0	genome.wustl.edu	37	4	3446081	3446081	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	3446081	3446081	C	T	SNP	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	silent	c.642	p.G214	0.342	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Fibronectin_type1,smart_Fibronectin_type1,pfscan_Fibronectin_type1	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758				34	0	0	18	5	21.7391
RFC1	0	genome.wustl.edu	37	4	39293271	39293271	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	39293271	39293271	C	A	SNP	RFC1	ENST00000381897	human	ensembl	74_37	-1	known	missense	c.3159	p.K1053N	0.993	pfam_DNA_replication_fac_RFC1_C,pirsf_DNA_replication_fac_C_lsu	pfam_DNA_replication_fac_RFC1_C,pfam_BRCT_dom,pfam_ATPase_AAA_core,superfamily_DNA_pol3_clamp-load_cplx_C,superfamily_P-loop_NTPase,superfamily_BRCT_dom,smart_BRCT_dom,smart_AAA+_ATPase,pirsf_DNA_replication_fac_C_lsu,pfscan_BRCT_dom	-	no_errors	RFC1	HGNC	ENSG00000035928				57	0	0	32	2	5.88235
ABCA11P	0	genome.wustl.edu	37	4	419621	419621	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	419621	419621	C	T	SNP	ABCA11P	ENST00000451020	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	ABCA11P	HGNC	ENSG00000251595				30	0	0	17	4	19.0476
GABRA2	0	genome.wustl.edu	37	4	46263976	46263976	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	46263976	46263976	C	T	SNP	GABRA2	ENST00000540012	human	ensembl	74_37	-1	known	nonsense	c.861	p.W287*	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa2_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRA2	HGNC	ENSG00000151834				106	0	0	45	19	29.6875
SPATA18	0	genome.wustl.edu	37	4	52943101	52943101	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	52943101	52943101	G	A	SNP	SPATA18	ENST00000295213	human	ensembl	74_37	+1	known	silent	c.915	p.R305	0.266	NULL	NULL	-	no_errors	SPATA18	HGNC	ENSG00000163071				63	0	0	39	17	30.3571
EVC	0	genome.wustl.edu	37	4	5731072	5731072	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	5731072	5731072	C	T	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	silent	c.339	p.F113	1.000	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840				100	0	0	58	18	23.6842
EVC	0	genome.wustl.edu	37	4	5798754	5798754	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	5798754	5798754	C	T	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	missense	c.1892	p.T631M	0.017	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840				79	0	0	64	14	17.9487
EVC	0	genome.wustl.edu	37	4	5798841	5798841	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	5798841	5798841	C	T	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	missense	c.1979	p.T660M	0.106	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840				86	0	0	51	12	19.0476
WFS1	0	genome.wustl.edu	37	4	6303072	6303072	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	6303072	6303072	G	A	SNP	WFS1	ENST00000226760	human	ensembl	74_37	+1	known	missense	c.1550	p.R517H	1.000	NULL	NULL	-	no_errors	WFS1	HGNC	ENSG00000109501				145	0	0	64	30	31.9149
PPP2R2C	0	genome.wustl.edu	37	4	6325199	6325199	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	6325199	6325199	G	A	SNP	PPP2R2C	ENST00000335585	human	ensembl	74_37	-1	known	missense	c.1174	p.R392C	1.000	superfamily_WD40_repeat_dom,pirsf_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2C	HGNC	ENSG00000074211				74	0	0	46	19	29.2308
BLOC1S4	0	genome.wustl.edu	37	4	6718567	6718567	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	6718567	6718567	T	C	SNP	BLOC1S4	ENST00000320776	human	ensembl	74_37	+1	known	missense	c.631	p.C211R	0.026	NULL	NULL	-	no_errors	BLOC1S4	HGNC	ENSG00000186222				39	0	0	19	5	20.8333
YTHDC1	0	genome.wustl.edu	37	4	69202929	69202929	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	69202929	69202929	C	T	SNP	YTHDC1	ENST00000344157	human	ensembl	74_37	-1	known	silent	c.699	p.E233	0.997	NULL	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDC1	HGNC	ENSG00000083896				33	0	0	19	8	29.6296
ADAMTS3	0	genome.wustl.edu	37	4	73148871	73148871	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	73148871	73148871	T	C	SNP	ADAMTS3	ENST00000286657	human	ensembl	74_37	-1	known	silent	c.3600	p.S1200	0.004	NULL	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS3	HGNC	ENSG00000156140				102	0	0	62	11	15.0685
SORCS2	0	genome.wustl.edu	37	4	7398081	7398081	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	7398081	7398081	C	T	SNP	SORCS2	ENST00000507866	human	ensembl	74_37	+1	known	missense	c.547	p.R183W	1.000	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	SORCS2	HGNC	ENSG00000184985				39	0	0	26	7	21.2121
BTC	0	genome.wustl.edu	37	4	75695292	75695292	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	75695292	75695292	C	A	SNP	BTC	ENST00000395743	human	ensembl	74_37	-1	known	nonsense	c.139	p.G47*	0.997	NULL	pfscan_EG-like_dom	-	no_errors	BTC	HGNC	ENSG00000174808				99	0	0	36	18	33.3333
PARM1	0	genome.wustl.edu	37	4	75937773	75937773	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	75937773	75937773	A	G	SNP	PARM1	ENST00000307428	human	ensembl	74_37	+1	known	missense	c.182	p.H61R	0.000	NULL	NULL	-	no_errors	PARM1	HGNC	ENSG00000169116				125	0	0	72	27	27.2727
SHROOM3	0	genome.wustl.edu	37	4	77661497	77661497	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	77661497	77661497	G	A	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	missense	c.2171	p.R724Q	0.308	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771				156	0	0	87	46	34.5865
AFAP1	0	genome.wustl.edu	37	4	7770639	7770639	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	7770639	7770639	C	T	SNP	AFAP1	ENST00000420658	human	ensembl	74_37	-1	known	missense	c.2350	p.V784I	0.384	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1	HGNC	ENSG00000196526				235	0	0	135	39	22.4138
ABLIM2	0	genome.wustl.edu	37	4	8037979	8037979	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	8037979	8037979	G	A	SNP	ABLIM2	ENST00000447017	human	ensembl	74_37	-1	known	missense	c.944	p.A315V	0.999	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM2	HGNC	ENSG00000163995				81	0	0	58	17	22.6667
LIN54	0	genome.wustl.edu	37	4	83849453	83849453	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	83849453	83849453	C	T	SNP	LIN54	ENST00000340417	human	ensembl	74_37	-1	known	silent	c.2052	p.L684	1.000	NULL	pfam_CRC	-	no_errors	LIN54	HGNC	ENSG00000189308				51	0	0	25	10	28.5714
HERC5	0	genome.wustl.edu	37	4	89414248	89414248	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	89414248	89414248	C	T	SNP	HERC5	ENST00000264350	human	ensembl	74_37	+1	known	missense	c.2219	p.P740L	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,superfamily_Haem_Oase-like_multi-hlx,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC5	HGNC	ENSG00000138646				78	0	0	45	15	25
PDHA2	0	genome.wustl.edu	37	4	96761854	96761854	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	96761854	96761854	G	A	SNP	PDHA2	ENST00000295266	human	ensembl	74_37	+1	known	missense	c.553	p.D185N	0.000	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	-	no_errors	PDHA2	HGNC	ENSG00000163114				115	0	0	38	19	33.3333
SLCO6A1	0	genome.wustl.edu	37	5	101813379	101813379	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	101813379	101813379	C	T	SNP	SLCO6A1	ENST00000379807	human	ensembl	74_37	-1	known	splice_site	c.802+1	e3+1	1.000	-	-	-	no_errors	SLCO6A1	HGNC	ENSG00000205359				103	0	0	46	22	32.3529
SLC12A7	0	genome.wustl.edu	37	5	1078056	1078056	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	1078056	1078056	G	A	SNP	SLC12A7	ENST00000264930	human	ensembl	74_37	-1	known	silent	c.1521	p.I507	0.965	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A7	HGNC	ENSG00000113504				20	0	0	17	5	22.7273
CAMK4	0	genome.wustl.edu	37	5	110819803	110819803	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	110819803	110819803	A	G	SNP	CAMK4	ENST00000282356	human	ensembl	74_37	+1	known	missense	c.1061	p.K354R	0.718	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK4	HGNC	ENSG00000152495				138	0	0	58	24	29.2683
CTNND2	0	genome.wustl.edu	37	5	11346635	11346635	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	11346635	11346635	C	T	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	missense	c.1477	p.A493T	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862				196	0	0	89	28	23.9316
KCNN2	0	genome.wustl.edu	37	5	113831789	113831789	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	113831789	113831789	C	T	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	silent	c.1650	p.H550	0.002	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709				181	0	0	99	28	22.0472
LMNB1	0	genome.wustl.edu	37	5	126156669	126156669	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	126156669	126156669	C	T	SNP	LMNB1	ENST00000261366	human	ensembl	74_37	+1	known	missense	c.1228	p.R410C	0.997	NULL	pfam_IF,pfam_Lamin_tail_dom	-	no_errors	LMNB1	HGNC	ENSG00000113368				41	0	0	21	6	22.2222
ENSG00000248245	0	genome.wustl.edu	37	5	132559843	132559843	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	132559843	132559843	G	A	SNP	ENSG00000248245	ENST00000502776	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTB-49A3.2	Clone_based_vega_gene	ENSG00000248245				37	0	0	19	6	24
H2AFY	0	genome.wustl.edu	37	5	134724774	134724774	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	134724774	134724774	G	A	SNP	H2AFY	ENST00000511689	human	ensembl	74_37	-1	known	missense	c.10	p.R4C	1.000	smart_Histone_H2A,pirsf_Core_histone_macro-H2A	pfam_Macro_dom,pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,smart_Macro_dom,pirsf_Core_histone_macro-H2A,prints_Histone_H2A,pfscan_Macro_dom	-	no_errors	H2AFY	HGNC	ENSG00000113648				86	0	0	66	18	21.4286
LECT2	0	genome.wustl.edu	37	5	135288738	135288738	+	RNA	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	135288738	135288738	T	C	SNP	LECT2	ENST00000471827	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LECT2	HGNC	ENSG00000145826				33	0	0	16	8	33.3333
SIL1	0	genome.wustl.edu	37	5	138286997	138286997	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	138286997	138286997	G	A	SNP	SIL1	ENST00000265195	human	ensembl	74_37	-1	known	missense	c.892	p.R298C	0.997	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	SIL1	HGNC	ENSG00000120725				13	0	0	4	2	33.3333
PSD2	0	genome.wustl.edu	37	5	139221925	139221925	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	139221925	139221925	C	T	SNP	PSD2	ENST00000274710	human	ensembl	74_37	+1	known	missense	c.2182	p.R728W	1.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD2	HGNC	ENSG00000146005				87	0	0	46	12	20.6897
ANKHD1	0	genome.wustl.edu	37	5	139876372	139876372	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	139876372	139876372	T	G	SNP	ANKHD1	ENST00000297183	human	ensembl	74_37	+1	known	missense	c.2513	p.L838R	1.000	pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKHD1	HGNC	ENSG00000131503				171	0	0	83	40	32.5203
PCDHA1	0	genome.wustl.edu	37	5	140166120	140166120	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140166120	140166120	G	A	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	missense	c.245	p.G82D	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970				248	0	0	141	39	21.6667
PCDHA5	0	genome.wustl.edu	37	5	140203211	140203211	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140203211	140203211	G	A	SNP	PCDHA5	ENST00000529859	human	ensembl	74_37	+1	known	silent	c.1851	p.A617	0.800	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965				159	0	0	112	56	33.3333
PCDHA7	0	genome.wustl.edu	37	5	140214306	140214306	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140214306	140214306	C	T	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.338	p.P113L	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963				474	0	0	259	69	21.0366
PCDHA9	0	genome.wustl.edu	37	5	140229805	140229805	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140229805	140229805	C	T	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	silent	c.1725	p.G575	0.000	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961				209	0	0	131	50	27.6243
PCDHA10	0	genome.wustl.edu	37	5	140237004	140237004	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140237004	140237004	C	T	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	silent	c.1371	p.S457	0.009	superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120				316	0	0	159	58	26.7281
PCDHA13	0	genome.wustl.edu	37	5	140262153	140262153	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140262153	140262153	G	A	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	silent	c.300	p.A100	0.002	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389				416	0	0	238	73	23.4727
PCDHA13	0	genome.wustl.edu	37	5	140263878	140263878	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140263878	140263878	G	A	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	silent	c.2025	p.A675	0.000	smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389				148	0	0	98	32	24.6154
PCDHB2	0	genome.wustl.edu	37	5	140476283	140476283	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140476283	140476283	G	A	SNP	PCDHB2	ENST00000194155	human	ensembl	74_37	+1	known	missense	c.1909	p.A637T	0.651	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB2	HGNC	ENSG00000112852				193	0	0	130	38	22.619
PCDHB5	0	genome.wustl.edu	37	5	140517042	140517042	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140517042	140517042	G	A	SNP	PCDHB5	ENST00000231134	human	ensembl	74_37	+1	known	missense	c.2026	p.A676T	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB5	HGNC	ENSG00000113209				290	0	0	161	58	26.484
ENSG00000255622	0	genome.wustl.edu	37	5	140536883	140536883	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140536883	140536883	A	G	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	missense	c.1307	p.Y436C	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622				256	0	0	137	36	20.8092
PCDHB14	0	genome.wustl.edu	37	5	140604549	140604549	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140604549	140604549	T	C	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	missense	c.1472	p.L491P	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327				406	0	0	262	74	22.0238
TAF7	0	genome.wustl.edu	37	5	140698650	140698650	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140698650	140698650	A	G	SNP	TAF7	ENST00000313368	human	ensembl	74_37	-1	known	missense	c.962	p.V321A	1.000	NULL	pfam_TAFII55_prot_cons_reg	-	no_errors	TAF7	HGNC	ENSG00000178913				29	0	0	15	5	25
PCDHGA2	0	genome.wustl.edu	37	5	140720821	140720821	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140720821	140720821	G	A	SNP	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	silent	c.2283	p.A761	0.009	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853				216	0	0	144	33	18.6441
PCDHGB3	0	genome.wustl.edu	37	5	140750742	140750742	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140750742	140750742	G	A	SNP	PCDHGB3	ENST00000576222	human	ensembl	74_37	+1	known	missense	c.781	p.V261I	0.074	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209				127	0	0	74	34	31.4815
PCDHGA8	0	genome.wustl.edu	37	5	140773876	140773876	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140773876	140773876	C	T	SNP	PCDHGA8	ENST00000398604	human	ensembl	74_37	+1	known	missense	c.1496	p.A499V	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767				82	0	0	52	15	22.3881
PCDHGA9	0	genome.wustl.edu	37	5	140783008	140783008	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140783008	140783008	C	T	SNP	PCDHGA9	ENST00000573521	human	ensembl	74_37	+1	known	silent	c.489	p.G163	0.034	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA9	HGNC	ENSG00000261934				161	0	0	114	24	17.3913
PCDHGA12	0	genome.wustl.edu	37	5	140811073	140811073	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140811073	140811073	G	A	SNP	PCDHGA12	ENST00000252085	human	ensembl	74_37	+1	known	silent	c.747	p.A249	0.003	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159				163	0	0	100	29	22.4806
PCDHGC5	0	genome.wustl.edu	37	5	140868902	140868902	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140868902	140868902	G	A	SNP	PCDHGC5	ENST00000252087	human	ensembl	74_37	+1	known	missense	c.95	p.R32H	0.967	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC5	HGNC	ENSG00000240764				77	0	0	43	19	30.6452
FCHSD1	0	genome.wustl.edu	37	5	141018999	141018999	+	RNA	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	141018999	141018999	T	C	SNP	FCHSD1	ENST00000523856	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FCHSD1	HGNC	ENSG00000197948				57	0	0	27	8	22.8571
ARAP3	0	genome.wustl.edu	37	5	141051513	141051513	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	141051513	141051513	C	A	SNP	ARAP3	ENST00000239440	human	ensembl	74_37	-1	known	missense	c.1620	p.K540N	0.998	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP	pfam_RhoGAP_dom,pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ras-assoc,pfam_SAM_2,pfam_SAM_type1,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP3	HGNC	ENSG00000120318				182	0	0	113	41	26.6234
KCTD16	0	genome.wustl.edu	37	5	143853300	143853300	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	143853300	143853300	G	A	SNP	KCTD16	ENST00000507359	human	ensembl	74_37	+1	known	missense	c.910	p.G304S	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD16	HGNC	ENSG00000183775				123	1	0.806452	81	23	22.1154
TCERG1	0	genome.wustl.edu	37	5	145838668	145838668	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	145838668	145838668	G	A	SNP	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	silent	c.660	p.Q220	0.997	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649				34	0	0	27	6	18.1818
JAKMIP2	0	genome.wustl.edu	37	5	146997527	146997527	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	146997527	146997527	A	G	SNP	JAKMIP2	ENST00000265272	human	ensembl	74_37	-1	known	missense	c.2293	p.Y765H	1.000	NULL	NULL	-	no_errors	JAKMIP2	HGNC	ENSG00000176049				59	0	0	27	13	32.5
ABLIM3	0	genome.wustl.edu	37	5	148563152	148563152	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	148563152	148563152	G	T	SNP	ABLIM3	ENST00000309868	human	ensembl	74_37	+1	known	missense	c.151	p.V51L	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM3	HGNC	ENSG00000173210				38	0	0	18	5	21.7391
SLC6A7	0	genome.wustl.edu	37	5	149581992	149581992	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	149581992	149581992	C	T	SNP	SLC6A7	ENST00000230671	human	ensembl	74_37	+1	known	missense	c.941	p.T314M	0.996	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A7	HGNC	ENSG00000011083				173	0	0	77	37	32.4561
TNIP1	0	genome.wustl.edu	37	5	150422141	150422141	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	150422141	150422141	C	T	SNP	TNIP1	ENST00000315050	human	ensembl	74_37	-1	known	missense	c.1094	p.R365H	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	TNIP1	HGNC	ENSG00000145901				76	0	0	39	16	29.0909
SLC36A3	0	genome.wustl.edu	37	5	150660654	150660654	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	150660654	150660654	C	T	SNP	SLC36A3	ENST00000377713	human	ensembl	74_37	-1	known	silent	c.1188	p.P396	0.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC36A3	HGNC	ENSG00000186334				123	0	0	67	27	28.7234
RNF145	0	genome.wustl.edu	37	5	158630643	158630643	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	158630643	158630643	T	C	SNP	RNF145	ENST00000518802	human	ensembl	74_37	-1	known	missense	c.73	p.K25E	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF145	HGNC	ENSG00000145860				63	0	0	35	5	12.5
FBXL7	0	genome.wustl.edu	37	5	15936592	15936592	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	15936592	15936592	G	A	SNP	FBXL7	ENST00000504595	human	ensembl	74_37	+1	known	missense	c.773	p.R258Q	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL7	HGNC	ENSG00000183580				56	0	0	50	10	16.6667
MYO10	0	genome.wustl.edu	37	5	16694613	16694613	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	16694613	16694613	C	T	SNP	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	missense	c.3667	p.G1223R	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				173	0	0	106	37	25.8741
MYO10	0	genome.wustl.edu	37	5	16701205	16701205	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	16701205	16701205	G	T	SNP	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	missense	c.3299	p.A1100D	0.332	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				18	0	0	6	4	40
B4GALT7	0	genome.wustl.edu	37	5	177035954	177035954	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	177035954	177035954	G	A	SNP	B4GALT7	ENST00000029410	human	ensembl	74_37	+1	known	missense	c.767	p.R256H	0.997	pfam_Galactosyl_T_C	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT7	HGNC	ENSG00000027847				126	0	0	61	25	29.0698
LOC202181	0	genome.wustl.edu	37	5	177053490	177053490	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	177053490	177053490	C	T	SNP	LOC202181	ENST00000499314	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-1277A3.2	Clone_based_vega_gene	ENSG00000246596				50	0	0	35	6	14.6341
HNRNPAB	0	genome.wustl.edu	37	5	177637616	177637616	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	177637616	177637616	C	T	SNP	HNRNPAB	ENST00000358344	human	ensembl	74_37	+1	known	missense	c.991	p.P331S	1.000	NULL	pfam_RRM_dom,pfam_CARG-binding_factor_N,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPAB	HGNC	ENSG00000197451				81	0	0	48	15	23.8095
PHYKPL	0	genome.wustl.edu	37	5	177638920	177638920	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	177638920	177638920	G	A	SNP	PHYKPL	ENST00000481811	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PHYKPL	HGNC	ENSG00000175309				54	0	0	34	7	17.0732
AACSP1	0	genome.wustl.edu	37	5	178199576	178199576	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	178199576	178199576	C	T	SNP	AACSP1	ENST00000503486	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AACSP1	HGNC	ENSG00000250420				31	0	0	18	7	28
GRM6	0	genome.wustl.edu	37	5	178413488	178413488	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	178413488	178413488	C	T	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	silent	c.1767	p.P589	0.999	pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262				55	0	0	33	21	38.8889
FLT4	0	genome.wustl.edu	37	5	180050992	180050992	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	180050992	180050992	G	A	SNP	FLT4	ENST00000261937	human	ensembl	74_37	-1	known	silent	c.1491	p.A497	0.356	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR3_rcpt	-	no_errors	FLT4	HGNC	ENSG00000037280				123	0	0	97	6	5.82524
AGXT2	0	genome.wustl.edu	37	5	34998924	34998924	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	34998924	34998924	C	T	SNP	AGXT2	ENST00000231420	human	ensembl	74_37	-1	known	missense	c.1445	p.R482H	1.000	superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT2	HGNC	ENSG00000113492				53	0	0	32	8	20
SPEF2	0	genome.wustl.edu	37	5	35753739	35753739	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	35753739	35753739	G	A	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.3344	p.R1115H	1.000	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582				207	0	0	113	45	28.481
CAPSL	0	genome.wustl.edu	37	5	35921187	35921187	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	35921187	35921187	C	T	SNP	CAPSL	ENST00000397366	human	ensembl	74_37	-1	known	silent	c.36	p.A12	0.433	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,prints_Recoverin,pfscan_EF_hand_dom	-	no_errors	CAPSL	HGNC	ENSG00000152611				100	0	0	60	19	24.0506
NIPBL	0	genome.wustl.edu	37	5	37064121	37064121	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	37064121	37064121	C	T	SNP	NIPBL	ENST00000448238	human	ensembl	74_37	+1	known	missense	c.8090	p.T2697M	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				31	0	0	12	6	33.3333
OSMR	0	genome.wustl.edu	37	5	38869209	38869209	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	38869209	38869209	C	T	SNP	OSMR	ENST00000274276	human	ensembl	74_37	+1	known	silent	c.63	p.Y21	0.004	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	OSMR	HGNC	ENSG00000145623				118	0	0	65	22	25.2874
PTGER4	0	genome.wustl.edu	37	5	40681484	40681484	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	40681484	40681484	A	G	SNP	PTGER4	ENST00000302472	human	ensembl	74_37	+1	known	missense	c.389	p.Y130C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prost_EP4_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prost_EP4_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn,prints_Prostglndn_DP_rcpt	-	no_errors	PTGER4	HGNC	ENSG00000171522				306	0	0	169	62	26.8398
C5orf28	0	genome.wustl.edu	37	5	43446519	43446519	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	43446519	43446519	G	T	SNP	C5orf28	ENST00000397080	human	ensembl	74_37	-1	known	silent	c.453	p.S151	1.000	NULL	NULL	-	no_errors	C5orf28	HGNC	ENSG00000151881				113	0	0	61	26	29.8851
ITGA1	0	genome.wustl.edu	37	5	52204835	52204835	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	52204835	52204835	G	T	SNP	ITGA1	ENST00000282588	human	ensembl	74_37	+1	known	missense	c.1563	p.E521D	0.361	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA1	HGNC	ENSG00000213949				76	0	0	42	22	34.375
SNX18	0	genome.wustl.edu	37	5	53815068	53815068	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	53815068	53815068	A	G	SNP	SNX18	ENST00000326277	human	ensembl	74_37	+1	known	missense	c.1286	p.D429G	1.000	pfam_Sorting_nexin_WASP-bd-dom,pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX18	HGNC	ENSG00000178996				95	0	0	58	18	23.6842
DHX29	0	genome.wustl.edu	37	5	54579211	54579211	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	54579211	54579211	A	G	SNP	DHX29	ENST00000251636	human	ensembl	74_37	-1	known	silent	c.1785	p.G595	0.993	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX29	HGNC	ENSG00000067248				112	0	0	87	15	14.7059
DHX29	0	genome.wustl.edu	37	5	54579256	54579256	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	54579256	54579256	T	C	SNP	DHX29	ENST00000251636	human	ensembl	74_37	-1	known	silent	c.1740	p.S580	0.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX29	HGNC	ENSG00000067248				197	0	0	117	25	17.6056
IL31RA	0	genome.wustl.edu	37	5	55212718	55212718	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	55212718	55212718	C	A	SNP	IL31RA	ENST00000447346	human	ensembl	74_37	+1	known	missense	c.2065	p.L689I	0.000	NULL	pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL31RA	HGNC	ENSG00000164509				100	0	0	58	16	21.6216
ARHGEF28	0	genome.wustl.edu	37	5	73169027	73169027	+	Silent	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	73169027	73169027	A	C	SNP	ARHGEF28	ENST00000545377	human	ensembl	74_37	+1	known	silent	c.2770	p.R924	0.721	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF28	HGNC	ENSG00000214944				18	0	0	10	6	37.5
HEXB	0	genome.wustl.edu	37	5	74011418	74011418	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	74011418	74011418	A	T	SNP	HEXB	ENST00000261416	human	ensembl	74_37	+1	known	missense	c.985	p.T329S	1.000	pfam_Glyco_hydro_20_cat-core,superfamily_Glycoside_hydrolase_SF,prints_Beta_hexosaminidase_sua/sub	pfam_Glyco_hydro_20_cat-core,pfam_Glyco_hydro_20b,superfamily_Glycoside_hydrolase_SF,prints_Beta_hexosaminidase_sua/sub	-	no_errors	HEXB	HGNC	ENSG00000049860				97	0	0	60	14	18.9189
AP3B1	0	genome.wustl.edu	37	5	77523225	77523225	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	77523225	77523225	A	G	SNP	AP3B1	ENST00000255194	human	ensembl	74_37	-1	known	silent	c.507	p.N169	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	-	no_errors	AP3B1	HGNC	ENSG00000132842				66	0	0	26	13	33.3333
THBS4	0	genome.wustl.edu	37	5	79368182	79368182	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	79368182	79368182	C	T	SNP	THBS4	ENST00000350881	human	ensembl	74_37	+1	known	missense	c.1802	p.A601V	1.000	pfam_Thrombospondin_3-like_rpt	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS4	HGNC	ENSG00000113296				516	0	0	291	97	25
RASA1	0	genome.wustl.edu	37	5	86668008	86668008	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	86668008	86668008	G	A	SNP	RASA1	ENST00000274376	human	ensembl	74_37	+1	known	missense	c.1772	p.R591H	1.000	NULL	pfam_SH2,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH2,smart_SH3_domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_RasGAP,prints_SH2	-	no_errors	RASA1	HGNC	ENSG00000145715				54	0	0	15	5	25
DDO	0	genome.wustl.edu	37	6	110714129	110714129	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	110714129	110714129	G	A	SNP	DDO	ENST00000368924	human	ensembl	74_37	-1	known	missense	c.959	p.A320V	0.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase	-	no_errors	DDO	HGNC	ENSG00000203797				172	0	0	94	33	25.9843
NEDD9	0	genome.wustl.edu	37	6	11192590	11192590	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	11192590	11192590	C	T	SNP	NEDD9	ENST00000379446	human	ensembl	74_37	-1	known	silent	c.651	p.P217	0.943	NULL	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859				65	0	0	10	4	28.5714
LAMA4	0	genome.wustl.edu	37	6	112441524	112441524	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	112441524	112441524	T	C	SNP	LAMA4	ENST00000230538	human	ensembl	74_37	-1	known	missense	c.4627	p.R1543G	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_II,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Focal_adhesion_kin_target_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Laminin_G	-	no_errors	LAMA4	HGNC	ENSG00000112769				69	0	0	33	13	28.2609
STL	0	genome.wustl.edu	37	6	125269199	125269199	+	RNA	SNP	G	G	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	125269199	125269199	G	C	SNP	STL	ENST00000439075	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-510H23.1	Clone_based_vega_gene	ENSG00000236548				47	0	0	29	9	23.6842
RNF217	0	genome.wustl.edu	37	6	125283970	125283970	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	125283970	125283970	G	A	SNP	RNF217	ENST00000521654	human	ensembl	74_37	+1	novel	missense	c.280	p.G94R	0.756	NULL	pfam_Znf_C6HC,smart_Znf_C6HC	-	no_errors	RNF217	HGNC	ENSG00000146373				69	0	0	43	13	23.2143
RNF217	0	genome.wustl.edu	37	6	125284152	125284152	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	125284152	125284152	C	T	SNP	RNF217	ENST00000521654	human	ensembl	74_37	+1	novel	silent	c.462	p.R154	0.991	NULL	pfam_Znf_C6HC,smart_Znf_C6HC	-	no_errors	RNF217	HGNC	ENSG00000146373				33	0	0	22	8	26.6667
TPD52L1	0	genome.wustl.edu	37	6	125541259	125541259	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	125541259	125541259	G	A	SNP	TPD52L1	ENST00000534000	human	ensembl	74_37	+1	known	missense	c.55	p.E19K	1.000	pfam_TPD52	pfam_TPD52	-	no_errors	TPD52L1	HGNC	ENSG00000111907				94	0	0	58	17	22.6667
SOGA3	0	genome.wustl.edu	37	6	127796643	127796643	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	127796643	127796643	G	A	SNP	SOGA3	ENST00000368268	human	ensembl	74_37	-1	known	missense	c.2528	p.A843V	1.000	NULL	pfam_SOGA	-	no_errors	SOGA3	HGNC	ENSG00000214338				243	0	0	155	47	23.2673
MOXD1	0	genome.wustl.edu	37	6	132619024	132619024	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	132619024	132619024	A	G	SNP	MOXD1	ENST00000367963	human	ensembl	74_37	-1	known	missense	c.1579	p.F527L	1.000	NULL	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	MOXD1	HGNC	ENSG00000079931				70	0	0	30	6	16.6667
ALDH8A1	0	genome.wustl.edu	37	6	135239813	135239813	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	135239813	135239813	A	G	SNP	ALDH8A1	ENST00000265605	human	ensembl	74_37	-1	known	missense	c.1204	p.F402L	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH8A1	HGNC	ENSG00000118514				123	0	0	61	23	27.381
AHI1	0	genome.wustl.edu	37	6	135639703	135639703	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	135639703	135639703	C	A	SNP	AHI1	ENST00000265602	human	ensembl	74_37	-1	known	missense	c.3380	p.S1127I	0.132	NULL	pfam_WD40_repeat,pfam_SH3_domain,pfam_SH3_2,superfamily_WD40_repeat_dom,superfamily_SH3_domain,smart_WD40_repeat,smart_SH3_domain,pfscan_SH3_domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_SH3_domain	-	no_errors	AHI1	HGNC	ENSG00000135541				13	0	0	10	3	23.0769
PDE7B	0	genome.wustl.edu	37	6	136502384	136502384	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	136502384	136502384	A	G	SNP	PDE7B	ENST00000308191	human	ensembl	74_37	+1	known	missense	c.968	p.D323G	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE7B	HGNC	ENSG00000171408				142	0	0	79	23	22.549
STX11	0	genome.wustl.edu	37	6	144508016	144508016	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	144508016	144508016	C	T	SNP	STX11	ENST00000367568	human	ensembl	74_37	+1	known	silent	c.252	p.R84	0.193	pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX11	HGNC	ENSG00000135604				71	0	0	58	8	12.1212
UTRN	0	genome.wustl.edu	37	6	144801014	144801014	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	144801014	144801014	G	A	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	missense	c.3403	p.A1135T	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818				150	0	0	78	30	27.7778
AKAP12	0	genome.wustl.edu	37	6	151671353	151671353	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	151671353	151671353	C	A	SNP	AKAP12	ENST00000253332	human	ensembl	74_37	+1	known	silent	c.1827	p.P609	1.000	pfam_Pkinase-A_anch_WSK-motif	pfam_Pkinase-A_anch_WSK-motif,pfam_RII_binding_1	-	no_errors	AKAP12	HGNC	ENSG00000131016				61	0	0	28	8	22.2222
AKAP12	0	genome.wustl.edu	37	6	151674283	151674283	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	151674283	151674283	A	G	SNP	AKAP12	ENST00000253332	human	ensembl	74_37	+1	known	missense	c.4757	p.D1586G	0.083	NULL	pfam_Pkinase-A_anch_WSK-motif,pfam_RII_binding_1	-	no_errors	AKAP12	HGNC	ENSG00000131016				85	0	0	52	23	30.6667
ZBTB2	0	genome.wustl.edu	37	6	151687735	151687735	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	151687735	151687735	C	T	SNP	ZBTB2	ENST00000325144	human	ensembl	74_37	-1	known	missense	c.466	p.G156R	0.003	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB2	HGNC	ENSG00000181472				118	0	0	64	25	28.0899
SCAF8	0	genome.wustl.edu	37	6	155154243	155154243	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	155154243	155154243	G	A	SNP	SCAF8	ENST00000367186	human	ensembl	74_37	+1	known	missense	c.3728	p.R1243H	1.000	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF8	HGNC	ENSG00000213079				89	0	0	61	13	17.5676
NOX3	0	genome.wustl.edu	37	6	155718034	155718034	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	155718034	155718034	C	T	SNP	NOX3	ENST00000159060	human	ensembl	74_37	-1	known	missense	c.1643	p.C548Y	0.998	pfam_Fe_red_NAD-bd_6	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX3	HGNC	ENSG00000074771				134	0	0	61	22	26.506
ARID1B	0	genome.wustl.edu	37	6	157522085	157522085	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	157522085	157522085	C	T	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	nonsense	c.4477	p.Q1493*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618				72	0	0	39	12	23.5294
SYNJ2	0	genome.wustl.edu	37	6	158454638	158454638	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	158454638	158454638	C	T	SNP	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	missense	c.637	p.R213C	1.000	pfam_Syja_N,pfscan_Syja_N	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269				106	1	0.934579	57	32	35.9551
TULP4	0	genome.wustl.edu	37	6	158735164	158735164	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	158735164	158735164	G	A	SNP	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	missense	c.116	p.R39H	0.997	superfamily_WD40_repeat_dom	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338				63	0	0	33	4	10.8108
PNLDC1	0	genome.wustl.edu	37	6	160227061	160227061	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	160227061	160227061	C	T	SNP	PNLDC1	ENST00000610273	human	ensembl	74_37	+1	known	missense	c.475	p.R159W	0.555	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	-	no_errors	PNLDC1	HGNC	ENSG00000146453				123	0	0	68	32	32
GMPR	0	genome.wustl.edu	37	6	16295240	16295240	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	16295240	16295240	C	A	SNP	GMPR	ENST00000259727	human	ensembl	74_37	+1	known	silent	c.861	p.A287	0.895	pfam_IMP_DH_GMPRt,pirsf_GMP_reduct1,tigrfam_GMP_reduct1	pfam_IMP_DH_GMPRt,pirsf_GMP_reduct1,tigrfam_GMP_reduct1	-	no_errors	GMPR	HGNC	ENSG00000137198				71	0	0	33	18	35.2941
C6orf118	0	genome.wustl.edu	37	6	165713956	165713956	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	165713956	165713956	G	A	SNP	C6orf118	ENST00000230301	human	ensembl	74_37	-1	known	missense	c.773	p.T258M	0.000	NULL	superfamily_Ribonuclease/ribotoxin	-	no_errors	C6orf118	HGNC	ENSG00000112539				302	0	0	138	52	27.3684
PDE10A	0	genome.wustl.edu	37	6	165895803	165895803	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	165895803	165895803	C	T	SNP	PDE10A	ENST00000539869	human	ensembl	74_37	-1	known	silent	c.225	p.R75	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE10A	HGNC	ENSG00000112541				134	0	0	77	14	15.3846
THBS2	0	genome.wustl.edu	37	6	169637303	169637303	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	169637303	169637303	C	T	SNP	THBS2	ENST00000366787	human	ensembl	74_37	-1	known	missense	c.1439	p.G480D	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS2	HGNC	ENSG00000186340				49	0	0	36	14	28
DEK	0	genome.wustl.edu	37	6	18237647	18237647	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	18237647	18237647	C	G	SNP	DEK	ENST00000397239	human	ensembl	74_37	-1	known	missense	c.863	p.S288T	1.000	NULL	pfam_DEK_C,pfam_SAP_dom,smart_SAP_dom	-	no_errors	DEK	HGNC	ENSG00000124795				48	0	0	28	9	24.3243
FAM65B	0	genome.wustl.edu	37	6	24848384	24848384	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	24848384	24848384	T	C	SNP	FAM65B	ENST00000259698	human	ensembl	74_37	-1	known	splice_site	c.948-2	e11-2	1.000	-	-	-	no_errors	FAM65B	HGNC	ENSG00000111913				41	0	0	18	6	25
LRRC16A	0	genome.wustl.edu	37	6	25529041	25529041	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	25529041	25529041	C	T	SNP	LRRC16A	ENST00000329474	human	ensembl	74_37	+1	novel	nonsense	c.1987	p.R663*	0.985	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16A	HGNC	ENSG00000079691				27	0	0	12	2	14.2857
HIST1H4F	0	genome.wustl.edu	37	6	26240759	26240759	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	26240759	26240759	C	T	SNP	HIST1H4F	ENST00000377745	human	ensembl	74_37	+1	known	missense	c.106	p.R36C	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4F	HGNC	ENSG00000198327				69	0	0	45	16	26.2295
HIST1H4I	0	genome.wustl.edu	37	6	27107164	27107164	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	27107164	27107164	A	G	SNP	HIST1H4I	ENST00000354348	human	ensembl	74_37	+1	known	missense	c.77	p.N26S	1.000	superfamily_Histone-fold,smart_Histone_H4,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4I	HGNC	ENSG00000198339				118	0	0	71	21	22.8261
OR2J2	0	genome.wustl.edu	37	6	29141560	29141560	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	29141560	29141560	T	A	SNP	OR2J2	ENST00000377167	human	ensembl	74_37	+1	known	missense	c.148	p.S50T	0.004	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2J2	HGNC	ENSG00000204700				182	0	0	117	42	26.4151
HLA-F	0	genome.wustl.edu	37	6	29692921	29692921	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	29692921	29692921	G	T	SNP	HLA-F	ENST00000259951	human	ensembl	74_37	+1	known	missense	c.724	p.G242W	0.675	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-F	HGNC	ENSG00000204642				114	0	0	61	22	26.506
PRRC2A	0	genome.wustl.edu	37	6	31594894	31594894	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	31594894	31594894	G	A	SNP	PRRC2A	ENST00000376007	human	ensembl	74_37	+1	known	silent	c.1209	p.P403	0.624	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469				76	0	0	67	16	19.2771
VWA7	0	genome.wustl.edu	37	6	31740843	31740843	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	31740843	31740843	G	A	SNP	VWA7	ENST00000375686	human	ensembl	74_37	-1	known	silent	c.975	p.S325	0.997	NULL	NULL	-	no_errors	VWA7	HGNC	ENSG00000204396				44	0	0	11	7	38.8889
CYP21A2	0	genome.wustl.edu	37	6	32008306	32008306	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	32008306	32008306	C	T	SNP	CYP21A2	ENST00000418967	human	ensembl	74_37	+1	known	missense	c.1063	p.R355C	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP21A2	HGNC	ENSG00000231852				95	0	0	50	9	15.2542
TNXB	0	genome.wustl.edu	37	6	32011636	32011636	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	32011636	32011636	G	C	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.11414	p.A3805G	0.008	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				318	0	0	195	56	22.3108
TNXB	0	genome.wustl.edu	37	6	32052427	32052427	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	32052427	32052427	C	T	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.3208	p.V1070M	0.027	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				24	0	0	20	6	23.0769
PPT2	0	genome.wustl.edu	37	6	32123549	32123549	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	32123549	32123549	G	A	SNP	PPT2	ENST00000361568	human	ensembl	74_37	+1	known	missense	c.440	p.G147E	1.000	pfam_Palm_thioest	pfam_Palm_thioest,prints_Palm_thioest	-	no_errors	PPT2	HGNC	ENSG00000221988				103	0	0	58	15	20.5479
TUBB2B	0	genome.wustl.edu	37	6	3225887	3225887	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	3225887	3225887	C	T	SNP	TUBB2B	ENST00000259818	human	ensembl	74_37	-1	known	missense	c.436	p.G146R	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Tubulin,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB2B	HGNC	ENSG00000137285				35	0	0	9	5	35.7143
BRD2	0	genome.wustl.edu	37	6	32945631	32945631	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	32945631	32945631	C	T	SNP	BRD2	ENST00000395289	human	ensembl	74_37	+1	known	missense	c.1427	p.S476L	0.997	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD2	HGNC	ENSG00000204256				123	0	0	74	16	17.7778
COL11A2	0	genome.wustl.edu	37	6	33135270	33135270	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	33135270	33135270	G	A	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	missense	c.4055	p.P1352L	0.994	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248				64	0	0	34	17	33.3333
RING1	0	genome.wustl.edu	37	6	33179100	33179100	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	33179100	33179100	C	T	SNP	RING1	ENST00000374656	human	ensembl	74_37	+1	known	silent	c.621	p.G207	0.304	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RING1	HGNC	ENSG00000204227				33	0	0	23	15	39.4737
DAXX	0	genome.wustl.edu	37	6	33288840	33288840	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	33288840	33288840	G	A	SNP	DAXX	ENST00000266000	human	ensembl	74_37	-1	known	nonsense	c.712	p.R238*	0.999	pfam_Daxx	pfam_Daxx	-	no_errors	DAXX	HGNC	ENSG00000204209				89	0	0	67	24	26.3736
ITPR3	0	genome.wustl.edu	37	6	33655066	33655066	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	33655066	33655066	C	T	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.6139	p.R2047C	0.979	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				62	0	0	46	13	22.0339
KCTD20	0	genome.wustl.edu	37	6	36454701	36454701	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	36454701	36454701	G	T	SNP	KCTD20	ENST00000373731	human	ensembl	74_37	+1	known	missense	c.1009	p.G337C	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD20	HGNC	ENSG00000112078				187	0	0	94	31	24.8
PRICKLE4	0	genome.wustl.edu	37	6	41754676	41754676	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	41754676	41754676	G	T	SNP	PRICKLE4	ENST00000335515	human	ensembl	74_37	+1	known	missense	c.964	p.G322W	0.000	NULL	pfam_Znf_LIM,pfam_PET_domain,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE4	HGNC	ENSG00000124593				205	0	0	97	43	30.7143
CUL7	0	genome.wustl.edu	37	6	43008318	43008318	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	43008318	43008318	G	A	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	nonsense	c.4225	p.Q1409*	1.000	pfam_Cullin_N,superfamily_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090				232	0	0	150	40	21.0526
TTBK1	0	genome.wustl.edu	37	6	43230989	43230989	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	43230989	43230989	G	A	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	silent	c.1887	p.T629	0.027	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216				17	0	0	5	7	58.3333
DLK2	0	genome.wustl.edu	37	6	43418437	43418437	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	43418437	43418437	G	T	SNP	DLK2	ENST00000357338	human	ensembl	74_37	-1	known	missense	c.992	p.A331D	0.999	NULL	pfam_EG-like_dom,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLK2	HGNC	ENSG00000171462				117	0	0	90	21	18.9189
AARS2	0	genome.wustl.edu	37	6	44275091	44275091	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	44275091	44275091	G	A	SNP	AARS2	ENST00000244571	human	ensembl	74_37	-1	known	missense	c.935	p.A312V	0.977	pfam_Ala-tRNA-synth_IIc_N,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	pfam_Ala-tRNA-synth_IIc_N,pfam_tRNA_SAD,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,smart_tRNA_SAD,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	-	no_errors	AARS2	HGNC	ENSG00000124608				31	0	0	13	6	31.5789
CDYL	0	genome.wustl.edu	37	6	4892607	4892607	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	4892607	4892607	G	A	SNP	CDYL	ENST00000328908	human	ensembl	74_37	+1	known	missense	c.847	p.G283R	0.971	NULL	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046				134	0	0	74	27	26.7327
PKHD1	0	genome.wustl.edu	37	6	51491808	51491808	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	51491808	51491808	A	G	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	silent	c.11772	p.T3924	0.000	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				165	0	0	91	20	18.018
ICK	0	genome.wustl.edu	37	6	52871165	52871165	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	52871165	52871165	G	A	SNP	ICK	ENST00000350082	human	ensembl	74_37	-1	known	silent	c.1692	p.I564	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ICK	HGNC	ENSG00000112144				115	0	0	45	23	33.8235
DST	0	genome.wustl.edu	37	6	56483994	56483994	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	56483994	56483994	G	A	SNP	DST	ENST00000370765	human	ensembl	74_37	-1	known	missense	c.4838	p.A1613V	0.000	NULL	pfam_Plectin_repeat,pfam_Spectrin_repeat,superfamily_Ig/albumin-bd,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DST	HGNC	ENSG00000151914				165	0	0	87	25	22.3214
BAI3	0	genome.wustl.edu	37	6	69666664	69666664	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	69666664	69666664	C	T	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	silent	c.1488	p.G496	0.192	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				114	0	0	77	20	20.6186
OGFRL1	0	genome.wustl.edu	37	6	72003316	72003316	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	72003316	72003316	T	C	SNP	OGFRL1	ENST00000370435	human	ensembl	74_37	+1	known	splice_site	c.400+2	e3+2	1.000	-	-	-	no_errors	OGFRL1	HGNC	ENSG00000119900				41	0	0	25	6	19.3548
RREB1	0	genome.wustl.edu	37	6	7231151	7231151	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	7231151	7231151	C	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.2819	p.P940L	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				38	0	0	26	6	18.75
RREB1	0	genome.wustl.edu	37	6	7231823	7231823	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	7231823	7231823	G	A	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.3491	p.R1164H	0.063	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				43	0	0	24	10	29.4118
RREB1	0	genome.wustl.edu	37	6	7246910	7246910	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	7246910	7246910	C	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	silent	c.4227	p.D1409	0.630	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782				18	0	0	7	5	41.6667
KHDC1	0	genome.wustl.edu	37	6	73951401	73951401	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	73951401	73951401	G	T	SNP	KHDC1	ENST00000257765	human	ensembl	74_37	-1	known	missense	c.346	p.L116M	0.014	NULL	NULL	-	no_errors	KHDC1	HGNC	ENSG00000135314				131	0	0	73	29	28.4314
DSP	0	genome.wustl.edu	37	6	7585548	7585548	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	7585548	7585548	G	A	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.8053	p.A2685T	1.000	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				306	0	0	183	66	26.506
PRSS35	0	genome.wustl.edu	37	6	84233911	84233911	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	84233911	84233911	T	C	SNP	PRSS35	ENST00000369700	human	ensembl	74_37	+1	known	missense	c.751	p.W251R	1.000	superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	-	no_errors	PRSS35	HGNC	ENSG00000146250				81	0	0	54	12	18.1818
CYB5R4	0	genome.wustl.edu	37	6	84573933	84573933	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	84573933	84573933	C	T	SNP	CYB5R4	ENST00000369681	human	ensembl	74_37	+1	known	nonsense	c.115	p.R39*	1.000	NULL	pfam_Cyt_B5-like_heme/steroid-bd,pfam_OxRdtase_FAD-bd_dom,pfam_OxRdtase_FAD/NAD-bd,pfam_CS_dom,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_Riboflavin_synthase-like_b-brl,superfamily_HSP20-like_chaperone,pfscan_CS_dom,pfscan_Cyt_B5-like_heme/steroid-bd,prints_NADH-Cyt_B5_reductase,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	CYB5R4	HGNC	ENSG00000065615				66	0	0	31	7	18.4211
ZNF292	0	genome.wustl.edu	37	6	87967491	87967491	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	87967491	87967491	A	G	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	missense	c.4144	p.R1382G	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				56	0	0	33	13	28.2609
C6orf165	0	genome.wustl.edu	37	6	88144752	88144752	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	88144752	88144752	C	T	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	missense	c.1475	p.T492I	0.694	pfam_DUF3508	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514				97	0	0	39	12	23.5294
MDN1	0	genome.wustl.edu	37	6	90364002	90364002	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	90364002	90364002	T	C	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.15542	p.Q5181R	0.496	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				298	1	0.334448	198	60	23.2558
BACH2	0	genome.wustl.edu	37	6	90660903	90660903	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	90660903	90660903	C	T	SNP	BACH2	ENST00000257749	human	ensembl	74_37	-1	known	missense	c.922	p.E308K	1.000	NULL	pfam_BTB_POZ,pfam_bZIP,superfamily_BTB/POZ_fold,superfamily_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH2	HGNC	ENSG00000112182				56	0	0	45	11	19.6429
EPO	0	genome.wustl.edu	37	7	100320333	100320333	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	100320333	100320333	C	T	SNP	EPO	ENST00000252723	human	ensembl	74_37	+1	known	missense	c.293	p.S98L	0.991	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,pirsf_Erythroptn,prints_Erythroptn	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,pirsf_Erythroptn,prints_Erythroptn	-	no_errors	EPO	HGNC	ENSG00000130427				84	0	0	80	15	15.7895
SLC12A9	0	genome.wustl.edu	37	7	100459533	100459533	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	100459533	100459533	G	A	SNP	SLC12A9	ENST00000354161	human	ensembl	74_37	+1	known	missense	c.1711	p.D571N	0.999	NULL	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC12A9	HGNC	ENSG00000146828				58	0	0	42	7	14.2857
PLOD3	0	genome.wustl.edu	37	7	100859470	100859470	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	100859470	100859470	G	A	SNP	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	missense	c.476	p.T159M	0.050	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397				85	0	0	75	19	20.2128
CUX1	0	genome.wustl.edu	37	7	101916762	101916762	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	101916762	101916762	G	A	SNP	CUX1	ENST00000292538	human	ensembl	74_37	+1	known	missense	c.1381	p.E461K	1.000	pfam_CASP_C	pfam_CASP_C,superfamily_LemA-like_dom	-	no_errors	CUX1	HGNC	ENSG00000257923				51	0	0	35	6	14.6341
SLC26A5	0	genome.wustl.edu	37	7	103017303	103017303	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	103017303	103017303	T	A	SNP	SLC26A5	ENST00000306312	human	ensembl	74_37	-1	known	nonsense	c.1993	p.K665*	1.000	pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A5	HGNC	ENSG00000170615				66	0	0	49	13	20.9677
KMT2E	0	genome.wustl.edu	37	7	104703837	104703837	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	104703837	104703837	G	A	SNP	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	missense	c.226	p.A76T	1.000	superfamily_Znf_FYVE_PHD	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483				103	0	0	57	33	36.6667
PIK3CG	0	genome.wustl.edu	37	7	106508513	106508513	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	106508513	106508513	C	T	SNP	PIK3CG	ENST00000359195	human	ensembl	74_37	+1	known	silent	c.507	p.H169	0.970	NULL	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851				73	0	0	45	30	40
CBLL1	0	genome.wustl.edu	37	7	107398609	107398609	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	107398609	107398609	A	G	SNP	CBLL1	ENST00000440859	human	ensembl	74_37	+1	known	silent	c.462	p.R154	1.000	NULL	pfscan_Znf_RING	-	no_errors	CBLL1	HGNC	ENSG00000105879				65	0	0	62	16	20.5128
LRRN3	0	genome.wustl.edu	37	7	110763694	110763694	+	Nonsense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	110763694	110763694	T	A	SNP	LRRN3	ENST00000308478	human	ensembl	74_37	+1	known	nonsense	c.866	p.L289*	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN3	HGNC	ENSG00000173114				102	0	0	76	16	17.3913
KCND2	0	genome.wustl.edu	37	7	119915484	119915484	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	119915484	119915484	C	T	SNP	KCND2	ENST00000331113	human	ensembl	74_37	+1	known	silent	c.798	p.D266	0.945	pfam_Ion_trans_dom,prints_K_chnl	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.2,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND2	HGNC	ENSG00000184408				78	0	0	54	19	26.0274
CPED1	0	genome.wustl.edu	37	7	120740134	120740134	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	120740134	120740134	C	T	SNP	CPED1	ENST00000310396	human	ensembl	74_37	+1	known	missense	c.904	p.R302C	1.000	NULL	NULL	-	no_errors	CPED1	HGNC	ENSG00000106034				52	0	0	24	10	29.4118
TAS2R16	0	genome.wustl.edu	37	7	122635358	122635358	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	122635358	122635358	T	C	SNP	TAS2R16	ENST00000249284	human	ensembl	74_37	-1	known	missense	c.331	p.T111A	0.102	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R16	HGNC	ENSG00000128519				48	0	0	27	26	49.0566
GRM8	0	genome.wustl.edu	37	7	126173401	126173401	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	126173401	126173401	G	T	SNP	GRM8	ENST00000339582	human	ensembl	74_37	-1	known	missense	c.2035	p.Q679K	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM8	HGNC	ENSG00000179603				105	0	0	55	18	24.6575
GCC1	0	genome.wustl.edu	37	7	127222666	127222666	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	127222666	127222666	C	T	SNP	GCC1	ENST00000321407	human	ensembl	74_37	-1	known	missense	c.1730	p.R577H	0.975	NULL	pfam_GRIP,superfamily_ARM-type_fold,smart_GRIP,pfscan_GRIP	-	no_errors	GCC1	HGNC	ENSG00000179562				93	0	0	78	26	25
SND1	0	genome.wustl.edu	37	7	127361422	127361422	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	127361422	127361422	C	T	SNP	SND1	ENST00000354725	human	ensembl	74_37	+1	known	nonsense	c.1120	p.R374*	1.000	pfam_Staphylococal_nuclease_OB-fold,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Staphylococal_nuclease_OB-fold	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157				109	0	0	82	6	6.81818
SMO	0	genome.wustl.edu	37	7	128850945	128850945	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	128850945	128850945	G	T	SNP	SMO	ENST00000249373	human	ensembl	74_37	+1	known	missense	c.1792	p.G598W	1.000	NULL	pfam_Frizzled,pfam_Frizzled_dom,pfam_GPCR_2_secretin-like,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	SMO	HGNC	ENSG00000128602				142	1	0.699301	145	29	16.6667
AHCYL2	0	genome.wustl.edu	37	7	129019540	129019540	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	129019540	129019540	G	A	SNP	AHCYL2	ENST00000325006	human	ensembl	74_37	+1	known	missense	c.425	p.R142H	1.000	NULL	pfam_Adenosylhomocysteinase,pfam_Ado_hCys_hydrolase_NAD-bd,pfam_D-isomer_2_OHA_DH_NAD-bd,tigrfam_Adenosylhomocysteinase	-	no_errors	AHCYL2	HGNC	ENSG00000158467				46	0	0	28	8	22.2222
STRIP2	0	genome.wustl.edu	37	7	129125495	129125495	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	129125495	129125495	G	A	SNP	STRIP2	ENST00000249344	human	ensembl	74_37	+1	known	missense	c.2330	p.R777H	1.000	pfam_DUF3402	pfam_DUF3402,pfam_N1221	-	no_errors	STRIP2	HGNC	ENSG00000128578				87	0	0	54	17	23.9437
WDR91	0	genome.wustl.edu	37	7	134878091	134878091	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	134878091	134878091	C	T	SNP	WDR91	ENST00000354475	human	ensembl	74_37	-1	known	silent	c.1551	p.P517	0.002	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR91	HGNC	ENSG00000105875				121	0	0	87	25	22.3214
DGKI	0	genome.wustl.edu	37	7	137148242	137148242	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	137148242	137148242	C	T	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	missense	c.2752	p.V918M	0.636	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680				135	0	0	90	24	21.0526
SVOPL	0	genome.wustl.edu	37	7	138333800	138333800	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	138333800	138333800	C	T	SNP	SVOPL	ENST00000288513	human	ensembl	74_37	-1	known	missense	c.161	p.R54H	0.998	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SVOPL	HGNC	ENSG00000157703				68	0	0	40	28	41.1765
ZC3HAV1L	0	genome.wustl.edu	37	7	138720499	138720499	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	138720499	138720499	G	A	SNP	ZC3HAV1L	ENST00000275766	human	ensembl	74_37	-1	known	missense	c.265	p.R89C	0.992	NULL	NULL	-	no_errors	ZC3HAV1L	HGNC	ENSG00000146858				9	0	0	9	3	25
HIPK2	0	genome.wustl.edu	37	7	139311473	139311473	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	139311473	139311473	C	T	SNP	HIPK2	ENST00000406875	human	ensembl	74_37	-1	known	missense	c.1493	p.R498Q	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK2	HGNC	ENSG00000064393				154	0	0	127	24	15.894
C7orf34	0	genome.wustl.edu	37	7	142636664	142636664	+	Silent	SNP	A	A	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	142636664	142636664	A	T	SNP	C7orf34	ENST00000409607	human	ensembl	74_37	+1	known	silent	c.21	p.G7	0.000	NULL	NULL	-	no_errors	C7orf34	HGNC	ENSG00000165131				57	0	0	37	18	32.7273
ZYX	0	genome.wustl.edu	37	7	143080027	143080027	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	143080027	143080027	T	C	SNP	ZYX	ENST00000322764	human	ensembl	74_37	+1	known	missense	c.635	p.V212A	0.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	ZYX	HGNC	ENSG00000159840				134	0	0	116	24	17.1429
CUL1	0	genome.wustl.edu	37	7	148456448	148456448	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	148456448	148456448	T	C	SNP	CUL1	ENST00000325222	human	ensembl	74_37	+1	known	splice_site	c.534+2	e4+2	1.000	-	-	-	no_errors	CUL1	HGNC	ENSG00000055130				114	0	0	101	21	17.2131
ZNF282	0	genome.wustl.edu	37	7	148921642	148921642	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	148921642	148921642	G	A	SNP	ZNF282	ENST00000262085	human	ensembl	74_37	+1	known	missense	c.1919	p.R640H	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF282	HGNC	ENSG00000170265				51	0	0	34	14	29.1667
KRBA1	0	genome.wustl.edu	37	7	149426385	149426385	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	149426385	149426385	G	A	SNP	KRBA1	ENST00000255992	human	ensembl	74_37	+1	known	missense	c.1732	p.V578I	0.000	NULL	NULL	-	no_errors	KRBA1	HGNC	ENSG00000133619				26	0	0	16	4	20
KCNH2	0	genome.wustl.edu	37	7	150648901	150648901	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	150648901	150648901	G	A	SNP	KCNH2	ENST00000262186	human	ensembl	74_37	-1	known	missense	c.1580	p.A527V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118				85	0	0	66	15	18.5185
SLC4A2	0	genome.wustl.edu	37	7	150767852	150767852	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	150767852	150767852	G	A	SNP	SLC4A2	ENST00000413384	human	ensembl	74_37	+1	known	missense	c.1603	p.V535M	1.000	pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_2,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A2	HGNC	ENSG00000164889				84	0	0	59	15	20.2703
INTS1	0	genome.wustl.edu	37	7	1525028	1525028	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	1525028	1525028	C	A	SNP	INTS1	ENST00000389470	human	ensembl	74_37	-1	known	silent	c.3540	p.G1180	0.847	NULL	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880				105	0	0	85	16	15.8416
SHH	0	genome.wustl.edu	37	7	155596158	155596158	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	155596158	155596158	C	T	SNP	SHH	ENST00000297261	human	ensembl	74_37	-1	known	silent	c.825	p.A275	1.000	pirsf_Hedgehog,pfam_Hint_dom,smart_Hint_dom_N,prints_Hedgehog	pirsf_Hedgehog,pfam_Hedgehog_signaling_dom,pfam_Hint_dom,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom,smart_Hint_dom_N,smart_Hint_dom_C,prints_Hedgehog,pfscan_Intein_splice_site	-	no_errors	SHH	HGNC	ENSG00000164690				13	0	0	7	9	56.25
PTPRN2	0	genome.wustl.edu	37	7	157959759	157959759	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	157959759	157959759	G	A	SNP	PTPRN2	ENST00000404321	human	ensembl	74_37	-1	known	silent	c.843	p.P281	0.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN2	HGNC	ENSG00000155093				36	0	0	30	6	16.6667
PTPRN2	0	genome.wustl.edu	37	7	157985120	157985120	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	157985120	157985120	C	T	SNP	PTPRN2	ENST00000404321	human	ensembl	74_37	-1	known	missense	c.517	p.A173T	0.085	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN2	HGNC	ENSG00000155093				127	0	0	104	22	17.4603
ABCB5	0	genome.wustl.edu	37	7	20782576	20782576	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	20782576	20782576	G	A	SNP	ABCB5	ENST00000258738	human	ensembl	74_37	+1	known	missense	c.1766	p.R589H	0.000	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846				67	0	0	38	8	17.3913
SP8	0	genome.wustl.edu	37	7	20824133	20824133	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	20824133	20824133	C	T	SNP	SP8	ENST00000418710	human	ensembl	74_37	-1	known	missense	c.1303	p.A435T	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2,prints_Antifreeze_1	-	no_errors	SP8	HGNC	ENSG00000164651				18	0	0	15	3	16.6667
DNAH11	0	genome.wustl.edu	37	7	21654837	21654837	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	21654837	21654837	C	T	SNP	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	missense	c.3958	p.R1320C	1.000	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877				65	0	0	56	11	16.4179
SNX8	0	genome.wustl.edu	37	7	2296552	2296552	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	2296552	2296552	A	T	SNP	SNX8	ENST00000222990	human	ensembl	74_37	-1	known	missense	c.1241	p.I414N	1.000	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX8	HGNC	ENSG00000106266				59	0	0	53	17	24.2857
KLHL7	0	genome.wustl.edu	37	7	23191791	23191791	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	23191791	23191791	G	C	SNP	KLHL7	ENST00000339077	human	ensembl	74_37	+1	known	missense	c.899	p.G300A	1.000	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550				70	0	0	33	16	32.6531
IQCE	0	genome.wustl.edu	37	7	2622222	2622222	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	2622222	2622222	C	T	SNP	IQCE	ENST00000402050	human	ensembl	74_37	+1	known	silent	c.639	p.N213	0.002	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCE	HGNC	ENSG00000106012				63	0	0	43	5	10.4167
TTYH3	0	genome.wustl.edu	37	7	2689576	2689576	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	2689576	2689576	C	T	SNP	TTYH3	ENST00000258796	human	ensembl	74_37	+1	known	silent	c.825	p.D275	1.000	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH3	HGNC	ENSG00000136295				127	0	0	101	24	19.2
CPVL	0	genome.wustl.edu	37	7	29135831	29135831	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	29135831	29135831	T	C	SNP	CPVL	ENST00000265394	human	ensembl	74_37	-1	known	missense	c.291	p.I97M	0.000	pfam_Peptidase_S10	pfam_Peptidase_S10,prints_Peptidase_S10	-	no_errors	CPVL	HGNC	ENSG00000106066				105	1	0.943396	75	30	28.5714
PRR15	0	genome.wustl.edu	37	7	29606289	29606289	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	29606289	29606289	C	T	SNP	PRR15	ENST00000319694	human	ensembl	74_37	+1	known	missense	c.344	p.P115L	0.005	NULL	NULL	-	no_errors	PRR15	HGNC	ENSG00000176532				20	0	0	9	3	25
ADCYAP1R1	0	genome.wustl.edu	37	7	31104454	31104454	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	31104454	31104454	C	G	SNP	ADCYAP1R1	ENST00000304166	human	ensembl	74_37	+1	known	missense	c.59	p.A20G	0.951	prints_GPCR_2_PACAP_1_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_PACAP_1_rcpt,prints_GPCR_2_secretin-like	-	no_errors	ADCYAP1R1	HGNC	ENSG00000078549				24	0	0	14	5	26.3158
POU6F2	0	genome.wustl.edu	37	7	39247127	39247127	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	39247127	39247127	C	T	SNP	POU6F2	ENST00000403058	human	ensembl	74_37	+1	known	missense	c.419	p.T140I	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU6F2	HGNC	ENSG00000106536				132	0	0	101	25	19.8413
SDK1	0	genome.wustl.edu	37	7	4152977	4152977	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	4152977	4152977	G	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.3491	p.R1164L	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				291	0	0	166	54	24.5455
GLI3	0	genome.wustl.edu	37	7	42005564	42005564	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	42005564	42005564	G	A	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.3107	p.A1036V	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				73	0	0	58	18	23.6842
GLI3	0	genome.wustl.edu	37	7	42005804	42005804	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	42005804	42005804	C	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.2867	p.R956H	0.977	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				33	0	0	28	7	20
SDK1	0	genome.wustl.edu	37	7	4304977	4304977	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	4304977	4304977	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	silent	c.6603	p.G2201	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				10	0	0	12	4	25
GCK	0	genome.wustl.edu	37	7	44185159	44185159	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	44185159	44185159	C	T	SNP	GCK	ENST00000345378	human	ensembl	74_37	-1	known	missense	c.1193	p.R398H	1.000	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	GCK	HGNC	ENSG00000106633				33	0	0	16	9	36
TNS3	0	genome.wustl.edu	37	7	47474972	47474972	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	47474972	47474972	C	T	SNP	TNS3	ENST00000311160	human	ensembl	74_37	-1	known	missense	c.232	p.A78T	1.000	smart_Tyr_Pase_cat,pfscan_Phosphatase_tensin-typ	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS3	HGNC	ENSG00000136205				138	0	0	102	20	16.3934
C7orf65	0	genome.wustl.edu	37	7	47694946	47694946	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	47694946	47694946	G	A	SNP	C7orf65	ENST00000408988	human	ensembl	74_37	+1	putative	missense	c.70	p.G24S	0.000	NULL	NULL	-	no_errors	C7orf65	HGNC	ENSG00000221845				49	0	0	45	11	19.6429
SLC29A4	0	genome.wustl.edu	37	7	5340255	5340255	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	5340255	5340255	C	T	SNP	SLC29A4	ENST00000297195	human	ensembl	74_37	+1	known	missense	c.1412	p.A471V	0.999	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt	-	no_errors	SLC29A4	HGNC	ENSG00000164638				132	0	0	112	23	17.037
SLC29A4	0	genome.wustl.edu	37	7	5340275	5340275	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	5340275	5340275	A	G	SNP	SLC29A4	ENST00000297195	human	ensembl	74_37	+1	known	missense	c.1432	p.K478E	0.954	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt	-	no_errors	SLC29A4	HGNC	ENSG00000164638				114	0	0	82	16	16.3265
SEPT14	0	genome.wustl.edu	37	7	55902182	55902182	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	55902182	55902182	C	T	SNP	SEPT14	ENST00000388975	human	ensembl	74_37	-1	known	missense	c.656	p.G219D	0.993	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT14	HGNC	ENSG00000154997				35	0	0	23	9	28.125
GBAS	0	genome.wustl.edu	37	7	56051523	56051523	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	56051523	56051523	G	A	SNP	GBAS	ENST00000322090	human	ensembl	74_37	+1	known	missense	c.547	p.G183R	1.000	superfamily_Dimeric_a/b-barrel	pfam_NIPSNAP,superfamily_Dimeric_a/b-barrel	-	no_errors	GBAS	HGNC	ENSG00000146729				74	0	0	55	10	15.3846
CYTH3	0	genome.wustl.edu	37	7	6210190	6210190	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	6210190	6210190	G	A	SNP	CYTH3	ENST00000350796	human	ensembl	74_37	-1	known	missense	c.799	p.R267C	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	CYTH3	HGNC	ENSG00000008256				77	0	0	61	18	22.7848
ZNF679	0	genome.wustl.edu	37	7	63726916	63726916	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	63726916	63726916	G	A	SNP	ZNF679	ENST00000255746	human	ensembl	74_37	+1	known	missense	c.905	p.G302D	0.996	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF679	HGNC	ENSG00000197123				40	0	0	40	11	21.5686
CCT6P3	0	genome.wustl.edu	37	7	64530112	64530112	+	RNA	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	64530112	64530112	G	T	SNP	CCT6P3	ENST00000426828	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CCT6P3	HGNC	ENSG00000234585				44	0	0	33	7	17.5
CRCP	0	genome.wustl.edu	37	7	65617408	65617408	+	RNA	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	65617408	65617408	T	C	SNP	CRCP	ENST00000492264	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	CRCP	HGNC	ENSG00000241258				41	0	0	34	5	12.8205
GTF2IRD2P1	0	genome.wustl.edu	37	7	72657377	72657377	+	RNA	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	72657377	72657377	A	G	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.987	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544				82	0	0	71	22	23.6559
GTF2IRD2P1	0	genome.wustl.edu	37	7	72657899	72657899	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	72657899	72657899	C	T	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.938	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544				132	0	0	87	15	14.7059
CLIP2	0	genome.wustl.edu	37	7	73753106	73753106	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	73753106	73753106	G	A	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	silent	c.450	p.T150	0.011	superfamily_CAP-Gly_domain	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665				40	0	0	32	11	25.5814
MAGI2	0	genome.wustl.edu	37	7	77885514	77885514	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	77885514	77885514	G	A	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.1793	p.A598V	1.000	superfamily_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391				46	0	0	50	5	9.09091
HGF	0	genome.wustl.edu	37	7	81335709	81335709	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	81335709	81335709	G	A	SNP	HGF	ENST00000222390	human	ensembl	74_37	-1	known	missense	c.1651	p.H551Y	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGF	HGNC	ENSG00000019991				106	0	0	68	12	15
PCLO	0	genome.wustl.edu	37	7	82474764	82474764	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	82474764	82474764	C	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.13869	p.Q4623	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				28	0	0	25	6	19.3548
PCLO	0	genome.wustl.edu	37	7	82580152	82580152	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	82580152	82580152	A	G	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.9752	p.I3251T	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				107	0	0	83	19	18.6275
SEMA3E	0	genome.wustl.edu	37	7	83037731	83037731	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	83037731	83037731	C	T	SNP	SEMA3E	ENST00000307792	human	ensembl	74_37	-1	known	missense	c.623	p.R208Q	0.003	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3E	HGNC	ENSG00000170381				52	0	0	41	7	14.5833
ABCB4	0	genome.wustl.edu	37	7	87037363	87037363	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	87037363	87037363	G	A	SNP	ABCB4	ENST00000265723	human	ensembl	74_37	-1	known	missense	c.3269	p.A1090V	0.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB4	HGNC	ENSG00000005471				125	0	0	116	26	18.3099
ABCB1	0	genome.wustl.edu	37	7	87133529	87133529	+	RNA	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	87133529	87133529	A	C	SNP	ABCB1	ENST00000488737	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	ABCB1	HGNC	ENSG00000085563				46	0	0	39	8	17.0213
SLC25A13	0	genome.wustl.edu	37	7	95775886	95775886	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	95775886	95775886	C	A	SNP	SLC25A13	ENST00000416240	human	ensembl	74_37	-1	known	silent	c.1437	p.G479	0.854	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_EF_hand_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A13	HGNC	ENSG00000004864				294	0	0	158	93	37.0518
SHFM1	0	genome.wustl.edu	37	7	96324111	96324111	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	96324111	96324111	G	A	SNP	SHFM1	ENST00000248566	human	ensembl	74_37	-1	known	nonsense	c.169	p.R57*	1.000	pfam_DSS1_SEM1	pfam_DSS1_SEM1	-	no_errors	SHFM1	HGNC	ENSG00000127922				88	0	0	41	24	36.9231
ZKSCAN5	0	genome.wustl.edu	37	7	99103788	99103788	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	99103788	99103788	T	C	SNP	ZKSCAN5	ENST00000326775	human	ensembl	74_37	+1	known	missense	c.121	p.Y41H	0.967	superfamily_Retrov_capsid_C	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN5	HGNC	ENSG00000196652				187	0	0	141	31	18.0233
AP4M1	0	genome.wustl.edu	37	7	99700406	99700406	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	99700406	99700406	T	C	SNP	AP4M1	ENST00000359593	human	ensembl	74_37	+1	known	splice_site	c.254+2	e3+2	1.000	-	-	-	no_errors	AP4M1	HGNC	ENSG00000221838				87	0	0	96	18	15.7895
VPS13B	0	genome.wustl.edu	37	8	100115327	100115327	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	100115327	100115327	C	T	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	missense	c.559	p.R187C	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				87	0	0	52	15	22.3881
CTHRC1	0	genome.wustl.edu	37	8	104388118	104388118	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	104388118	104388118	C	A	SNP	CTHRC1	ENST00000330295	human	ensembl	74_37	+1	known	silent	c.303	p.S101	1.000	NULL	pfam_Collagen	-	no_errors	CTHRC1	HGNC	ENSG00000164932				66	0	0	34	8	19.0476
ZHX1	0	genome.wustl.edu	37	8	124266643	124266643	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	124266643	124266643	G	A	SNP	ZHX1	ENST00000297857	human	ensembl	74_37	-1	known	missense	c.1544	p.T515I	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX1	HGNC	ENSG00000165156				141	0	0	72	30	29.4118
FER1L6	0	genome.wustl.edu	37	8	124989713	124989713	+	Silent	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	124989713	124989713	C	A	SNP	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	silent	c.927	p.I309	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814				135	0	0	81	20	19.802
ASAP1	0	genome.wustl.edu	37	8	131070256	131070256	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	131070256	131070256	T	C	SNP	ASAP1	ENST00000357668	human	ensembl	74_37	-1	known	missense	c.3259	p.T1087A	0.999	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox	pfam_ArfGAP,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP,prints_p67phox	-	no_errors	ASAP1	HGNC	ENSG00000153317				141	0	0	71	26	26.8041
ADCY8	0	genome.wustl.edu	37	8	131833656	131833656	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	131833656	131833656	C	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.2686	p.G896W	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				40	0	0	31	5	13.8889
LRRC6	0	genome.wustl.edu	37	8	133627291	133627291	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	133627291	133627291	C	T	SNP	LRRC6	ENST00000250173	human	ensembl	74_37	-1	known	missense	c.967	p.V323I	0.999	superfamily_HSP20-like_chaperone,pfscan_CS_dom	superfamily_HSP20-like_chaperone,smart_U2A'_phosphoprotein32A_C,pfscan_CS_dom	-	no_errors	LRRC6	HGNC	ENSG00000129295				57	0	0	29	5	14.7059
WISP1	0	genome.wustl.edu	37	8	134203444	134203444	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	134203444	134203444	C	T	SNP	WISP1	ENST00000377863	human	ensembl	74_37	+1	known	missense	c.82	p.R28C	0.120	NULL	pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt	-	no_errors	WISP1	HGNC	ENSG00000104415				35	0	0	24	12	33.3333
ENSG00000271959	0	genome.wustl.edu	37	8	142445183	142445183	+	RNA	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	142445183	142445183	C	A	SNP	ENSG00000271959	ENST00000606664	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CTD-3064M3.7	Clone_based_vega_gene	ENSG00000271959				34	0	0	25	10	28.5714
RHPN1	0	genome.wustl.edu	37	8	144462816	144462816	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	144462816	144462816	C	T	SNP	RHPN1	ENST00000289013	human	ensembl	74_37	+1	known	missense	c.1274	p.A425V	0.074	pfam_BRO1_dom,pfscan_BRO1_dom	pfam_BRO1_dom,pfam_HR1_rho-bd,pfam_PDZ,superfamily_PDZ,superfamily_HR1_rho-bd,smart_HR1_rho-bd,smart_PDZ,pfscan_BRO1_dom,pfscan_PDZ	-	no_errors	RHPN1	HGNC	ENSG00000158106				11	0	0	3	4	57.1429
SCRIB	0	genome.wustl.edu	37	8	144887379	144887379	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	144887379	144887379	C	T	SNP	SCRIB	ENST00000320476	human	ensembl	74_37	-1	known	missense	c.2573	p.R858H	0.109	superfamily_PDZ	pfam_PDZ,pfam_Leu-rich_rpt,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	SCRIB	HGNC	ENSG00000180900				15	0	0	9	3	25
EPPK1	0	genome.wustl.edu	37	8	144946807	144946807	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	144946807	144946807	C	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	silent	c.615	p.T205	0.000	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				41	0	0	24	7	22.5806
CYC1	0	genome.wustl.edu	37	8	145152192	145152192	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	145152192	145152192	T	C	SNP	CYC1	ENST00000318911	human	ensembl	74_37	+1	known	missense	c.931	p.W311R	1.000	pfam_Cyt_c1,superfamily_Cyt_c1_TM_anchor_C	pfam_Cyt_c1,superfamily_Cyt_c-like_dom,superfamily_Cyt_c1_TM_anchor_C,prints_Cyt_c1	-	no_errors	CYC1	HGNC	ENSG00000179091				76	0	0	45	11	19.6429
CPSF1	0	genome.wustl.edu	37	8	145626108	145626108	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	145626108	145626108	G	A	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	missense	c.643	p.P215S	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				23	0	0	15	11	42.3077
PPP1R16A	0	genome.wustl.edu	37	8	145725579	145725579	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	145725579	145725579	C	T	SNP	PPP1R16A	ENST00000292539	human	ensembl	74_37	+1	known	missense	c.577	p.R193C	0.447	superfamily_Ankyrin_rpt-contain_dom,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R16A	HGNC	ENSG00000160972				35	0	0	28	6	17.6471
ZNF517	0	genome.wustl.edu	37	8	146033389	146033389	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	146033389	146033389	C	T	SNP	ZNF517	ENST00000359971	human	ensembl	74_37	+1	known	missense	c.1088	p.A363V	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF517	HGNC	ENSG00000197363				20	0	0	17	7	29.1667
TUSC3	0	genome.wustl.edu	37	8	15508312	15508312	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	15508312	15508312	G	A	SNP	TUSC3	ENST00000503731	human	ensembl	74_37	+1	known	missense	c.415	p.V139I	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_OligosaccharylTrfase_OST3/OST6,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TUSC3	HGNC	ENSG00000104723				156	0	0	81	33	28.9474
SORBS3	0	genome.wustl.edu	37	8	22428603	22428603	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	22428603	22428603	C	T	SNP	SORBS3	ENST00000240123	human	ensembl	74_37	+1	known	missense	c.1612	p.R538C	0.006	superfamily_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,prints_p67phox,prints_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS3	HGNC	ENSG00000120896				96	0	0	56	20	26.3158
CHMP7	0	genome.wustl.edu	37	8	23117743	23117743	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	23117743	23117743	C	A	SNP	CHMP7	ENST00000313219	human	ensembl	74_37	+1	known	missense	c.1207	p.R403S	0.946	pfam_Snf7	pfam_Snf7	-	no_errors	CHMP7	HGNC	ENSG00000147457				122	0	0	70	21	23.0769
KCTD9	0	genome.wustl.edu	37	8	25292919	25292919	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	25292919	25292919	G	A	SNP	KCTD9	ENST00000221200	human	ensembl	74_37	-1	known	missense	c.773	p.A258V	1.000	pfam_5peptide_repeat	pfam_5peptide_repeat,pfam_T1-type_BTB,pfam_K_channel_plant,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	KCTD9	HGNC	ENSG00000104756				40	0	0	25	8	24.2424
DUSP4	0	genome.wustl.edu	37	8	29194651	29194651	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	29194651	29194651	G	T	SNP	DUSP4	ENST00000240100	human	ensembl	74_37	-1	known	silent	c.1077	p.T359	0.888	pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP4	HGNC	ENSG00000120875				26	0	0	21	9	30
ADAM32	0	genome.wustl.edu	37	8	39022310	39022310	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	39022310	39022310	A	T	SNP	ADAM32	ENST00000379907	human	ensembl	74_37	+1	known	missense	c.622	p.I208L	0.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM32	HGNC	ENSG00000197140				52	0	0	37	16	30.1887
AP3M2	0	genome.wustl.edu	37	8	42019858	42019858	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	42019858	42019858	C	T	SNP	AP3M2	ENST00000174653	human	ensembl	74_37	+1	known	missense	c.505	p.R169W	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Clathrin_mu	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP3M2	HGNC	ENSG00000070718				329	0	0	189	48	20.2532
PLAT	0	genome.wustl.edu	37	8	42033526	42033526	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	42033526	42033526	G	A	SNP	PLAT	ENST00000220809	human	ensembl	74_37	-1	known	silent	c.1674	p.D558	0.001	superfamily_Trypsin-like_Pept_dom,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Kringle,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PLAT	HGNC	ENSG00000104368				38	0	0	30	11	26.8293
PRKDC	0	genome.wustl.edu	37	8	48777212	48777212	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	48777212	48777212	T	C	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.5473	p.T1825A	1.000	pfam_NUC194,superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729				19	0	0	16	6	27.2727
PXDNL	0	genome.wustl.edu	37	8	52323922	52323922	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	52323922	52323922	C	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	silent	c.1950	p.P650	0.000	NULL	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485				26	0	0	13	4	23.5294
RP1	0	genome.wustl.edu	37	8	55541567	55541567	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	55541567	55541567	G	A	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	missense	c.5125	p.V1709M	0.004	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237				102	0	0	53	12	18.4615
NSMAF	0	genome.wustl.edu	37	8	59520362	59520362	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	59520362	59520362	C	T	SNP	NSMAF	ENST00000427130	human	ensembl	74_37	-1	known	missense	c.818	p.R273H	1.000	pfam_GRAM,smart_GRAM	pfam_BEACH_dom,pfam_WD40_repeat,pfam_GRAM,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,smart_GRAM,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NSMAF	HGNC	ENSG00000035681				180	0	0	110	26	19.1176
BHLHE22	0	genome.wustl.edu	37	8	65493746	65493746	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	65493746	65493746	G	A	SNP	BHLHE22	ENST00000321870	human	ensembl	74_37	+1	known	silent	c.399	p.A133	0.807	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	BHLHE22	HGNC	ENSG00000180828				22	0	0	15	4	21.0526
DEFB1	0	genome.wustl.edu	37	8	6728283	6728283	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	6728283	6728283	G	A	SNP	DEFB1	ENST00000297439	human	ensembl	74_37	-1	known	nonsense	c.127	p.Q43*	0.000	pfam_Defensin_beta-typ	pfam_Defensin_beta-typ	-	no_errors	DEFB1	HGNC	ENSG00000164825				84	0	0	29	14	32.5581
C8orf46	0	genome.wustl.edu	37	8	67425779	67425779	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	67425779	67425779	C	T	SNP	C8orf46	ENST00000305454	human	ensembl	74_37	+1	known	missense	c.347	p.P116L	0.996	NULL	NULL	-	no_errors	C8orf46	HGNC	ENSG00000169085				114	0	0	93	23	19.8276
SLCO5A1	0	genome.wustl.edu	37	8	70744100	70744100	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	70744100	70744100	G	A	SNP	SLCO5A1	ENST00000260126	human	ensembl	74_37	-1	known	missense	c.809	p.A270V	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571				129	0	0	78	26	25
PRDM14	0	genome.wustl.edu	37	8	70980488	70980488	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	70980488	70980488	C	T	SNP	PRDM14	ENST00000276594	human	ensembl	74_37	-1	known	missense	c.889	p.G297R	0.093	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_Znf_C2H2,pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM14	HGNC	ENSG00000147596				150	0	0	101	39	27.8571
IMPA1	0	genome.wustl.edu	37	8	82592961	82592961	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	82592961	82592961	C	A	SNP	IMPA1	ENST00000449740	human	ensembl	74_37	-1	known	missense	c.298	p.D100Y	1.000	pfam_Inositol_monophosphatase,prints_Inositol_monophosphatase	pfam_Inositol_monophosphatase,prints_Inositol_monoPase_Li-sen,prints_Inositol_monophosphatase	-	no_errors	IMPA1	HGNC	ENSG00000133731				89	0	0	20	8	28.5714
DECR1	0	genome.wustl.edu	37	8	91031385	91031385	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	91031385	91031385	T	C	SNP	DECR1	ENST00000220764	human	ensembl	74_37	+1	known	silent	c.402	p.V134	0.003	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH	-	no_errors	DECR1	HGNC	ENSG00000104325				37	0	0	21	7	25
KIAA1429	0	genome.wustl.edu	37	8	95523814	95523814	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	95523814	95523814	G	T	SNP	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	missense	c.2989	p.L997I	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944				95	0	0	67	20	22.9885
NDUFAF6	0	genome.wustl.edu	37	8	96047721	96047721	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	96047721	96047721	C	T	SNP	NDUFAF6	ENST00000396124	human	ensembl	74_37	+1	known	nonsense	c.337	p.R113*	1.000	pfam_Squ/phyt_synthse,superfamily_Terpenoid_synth	pfam_Squ/phyt_synthse,superfamily_Terpenoid_synth	-	no_errors	NDUFAF6	HGNC	ENSG00000156170				48	0	0	27	12	30.7692
TNKS	0	genome.wustl.edu	37	8	9609124	9609124	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	9609124	9609124	C	T	SNP	TNKS	ENST00000310430	human	ensembl	74_37	+1	known	silent	c.2838	p.D946	0.416	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS	HGNC	ENSG00000173273				176	0	0	104	43	29.2517
GDF6	0	genome.wustl.edu	37	8	97157057	97157057	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	97157057	97157057	A	C	SNP	GDF6	ENST00000287020	human	ensembl	74_37	-1	known	missense	c.1102	p.W368G	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF6	HGNC	ENSG00000156466				49	0	0	35	9	20.4545
PTDSS1	0	genome.wustl.edu	37	8	97321797	97321797	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	97321797	97321797	T	C	SNP	PTDSS1	ENST00000517309	human	ensembl	74_37	+1	known	silent	c.1020	p.A340	0.999	pfam_PSS	pfam_PSS	-	no_errors	PTDSS1	HGNC	ENSG00000156471				71	0	0	32	14	30.4348
OSR2	0	genome.wustl.edu	37	8	99961493	99961493	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	99961493	99961493	G	A	SNP	OSR2	ENST00000457907	human	ensembl	74_37	+1	known	missense	c.676	p.V226I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	OSR2	HGNC	ENSG00000164920				267	1	0.373134	163	58	26.2443
GABBR2	0	genome.wustl.edu	37	9	101340317	101340317	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	101340317	101340317	G	A	SNP	GABBR2	ENST00000259455	human	ensembl	74_37	-1	known	missense	c.359	p.A120V	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,prints_GPCR_3,pfscan_GPCR_3_C	-	no_errors	GABBR2	HGNC	ENSG00000136928				91	0	0	38	16	29.6296
NR4A3	0	genome.wustl.edu	37	9	102590786	102590786	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	102590786	102590786	G	A	SNP	NR4A3	ENST00000330847	human	ensembl	74_37	+1	known	silent	c.495	p.A165	0.316	prints_Nuc_orph_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NOR1_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A3	HGNC	ENSG00000119508				72	0	0	45	17	27.4194
ALDOB	0	genome.wustl.edu	37	9	104189783	104189783	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	104189783	104189783	T	C	SNP	ALDOB	ENST00000374855	human	ensembl	74_37	-1	known	missense	c.521	p.Y174C	1.000	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOB	HGNC	ENSG00000136872				75	0	0	48	9	15.7895
ZNF462	0	genome.wustl.edu	37	9	109689819	109689819	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	109689819	109689819	T	C	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	missense	c.3626	p.L1209P	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				639	0	0	401	140	25.878
ZNF462	0	genome.wustl.edu	37	9	109736549	109736549	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	109736549	109736549	A	G	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	missense	c.7007	p.H2336R	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				488	1	0.204499	278	77	21.6901
MUSK	0	genome.wustl.edu	37	9	113510017	113510017	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	113510017	113510017	G	T	SNP	MUSK	ENST00000374448	human	ensembl	74_37	+1	known	missense	c.850	p.A284S	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Frizzled_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MUSK	HGNC	ENSG00000030304				150	0	0	71	22	23.6559
KIAA0368	0	genome.wustl.edu	37	9	114151873	114151873	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	114151873	114151873	G	A	SNP	KIAA0368	ENST00000259335	human	ensembl	74_37	-1	known	missense	c.3944	p.T1315I	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA0368	HGNC	ENSG00000136813				50	0	0	27	13	32.5
BRINP1	0	genome.wustl.edu	37	9	121929407	121929407	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	121929407	121929407	C	T	SNP	BRINP1	ENST00000265922	human	ensembl	74_37	-1	known	silent	c.2241	p.T747	0.010	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP1	HGNC	ENSG00000078725				226	0	0	131	37	22.0238
STOM	0	genome.wustl.edu	37	9	124110298	124110298	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	124110298	124110298	C	T	SNP	STOM	ENST00000286713	human	ensembl	74_37	-1	known	missense	c.655	p.A219T	1.000	pfam_Band_7,prints_Stomatin	pfam_Band_7,smart_Band_7,prints_Stomatin	-	no_errors	STOM	HGNC	ENSG00000148175				126	0	0	81	20	19.802
PDCL	0	genome.wustl.edu	37	9	125585301	125585301	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	125585301	125585301	A	C	SNP	PDCL	ENST00000259467	human	ensembl	74_37	-1	known	missense	c.348	p.S116R	0.993	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	-	no_errors	PDCL	HGNC	ENSG00000136940				157	1	0.632911	92	29	23.9669
SCAI	0	genome.wustl.edu	37	9	127781189	127781189	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	127781189	127781189	A	G	SNP	SCAI	ENST00000373549	human	ensembl	74_37	-1	known	silent	c.819	p.V273	0.989	pfam_DUF3550,pirsf_UCP013022	pfam_DUF3550,pirsf_UCP013022	-	no_errors	SCAI	HGNC	ENSG00000173611				69	0	0	28	12	30
ZBTB34	0	genome.wustl.edu	37	9	129642876	129642876	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	129642876	129642876	G	A	SNP	ZBTB34	ENST00000319119	human	ensembl	74_37	+1	known	missense	c.1198	p.G400R	1.000	pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB34	HGNC	ENSG00000177125				78	0	0	44	11	20
LCN2	0	genome.wustl.edu	37	9	130913968	130913968	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	130913968	130913968	C	T	SNP	LCN2	ENST00000372998	human	ensembl	74_37	+1	known	silent	c.333	p.P111	0.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_N_gelatinase	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_N_gelatinase,prints_PstgldnD_synth,prints_Lipocalin,prints_A1-microglobln	-	no_errors	LCN2	HGNC	ENSG00000148346				80	0	0	56	13	18.8406
SLC27A4	0	genome.wustl.edu	37	9	131105530	131105530	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	131105530	131105530	G	A	SNP	SLC27A4	ENST00000300456	human	ensembl	74_37	+1	known	missense	c.119	p.R40H	0.998	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A4	HGNC	ENSG00000167114				79	0	0	62	18	22.5
MPDZ	0	genome.wustl.edu	37	9	13176312	13176312	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	13176312	13176312	C	T	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	silent	c.2754	p.S918	0.000	NULL	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186				15	0	0	5	9	64.2857
CRAT	0	genome.wustl.edu	37	9	131864692	131864692	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	131864692	131864692	A	G	SNP	CRAT	ENST00000318080	human	ensembl	74_37	-1	known	missense	c.617	p.V206A	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CRAT	HGNC	ENSG00000095321				254	0	0	155	43	21.7172
ABL1	0	genome.wustl.edu	37	9	133738296	133738296	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	133738296	133738296	C	T	SNP	ABL1	ENST00000372348	human	ensembl	74_37	+1	known	silent	c.753	p.Y251	0.985	superfamily_Kinase-like_dom	pfam_F-actin_binding,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL1	HGNC	ENSG00000097007				143	0	0	83	28	25.2252
FAM78A	0	genome.wustl.edu	37	9	134151373	134151373	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	134151373	134151373	C	T	SNP	FAM78A	ENST00000372271	human	ensembl	74_37	-1	known	missense	c.194	p.R65Q	1.000	NULL	NULL	-	no_errors	FAM78A	HGNC	ENSG00000126882				93	0	0	64	24	27.2727
TSC1	0	genome.wustl.edu	37	9	135771922	135771922	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	135771922	135771922	C	T	SNP	TSC1	ENST00000298552	human	ensembl	74_37	-1	known	silent	c.3195	p.T1065	0.000	NULL	pfam_Hamartin,superfamily_ARM-type_fold	-	no_errors	TSC1	HGNC	ENSG00000165699				104	0	0	70	33	32.0388
GTF3C5	0	genome.wustl.edu	37	9	135927498	135927498	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	135927498	135927498	A	G	SNP	GTF3C5	ENST00000372108	human	ensembl	74_37	+1	known	missense	c.820	p.S274G	1.000	pfam_TF_IIIC_su-5	pfam_TF_IIIC_su-5	-	no_errors	GTF3C5	HGNC	ENSG00000148308				92	0	0	60	24	28.5714
CEL	0	genome.wustl.edu	37	9	135940544	135940544	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	135940544	135940544	G	A	SNP	CEL	ENST00000372080	human	ensembl	74_37	+1	known	missense	c.467	p.R156H	0.562	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CEL	HGNC	ENSG00000170835				1237	0	0	838	83	9.01194
CEL	0	genome.wustl.edu	37	9	135940576	135940576	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	135940576	135940576	C	T	SNP	CEL	ENST00000372080	human	ensembl	74_37	+1	known	missense	c.499	p.R167C	1.000	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CEL	HGNC	ENSG00000170835				1104	0	0	750	84	10.0719
SARDH	0	genome.wustl.edu	37	9	136573535	136573535	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	136573535	136573535	C	T	SNP	SARDH	ENST00000371872	human	ensembl	74_37	-1	known	silent	c.1344	p.S448	0.464	NULL	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C	-	no_errors	SARDH	HGNC	ENSG00000123453				195	0	0	117	44	27.3292
RXRA	0	genome.wustl.edu	37	9	137300840	137300840	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	137300840	137300840	C	T	SNP	RXRA	ENST00000481739	human	ensembl	74_37	+1	known	missense	c.485	p.T162M	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Nuc_recep-AF1,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoic_acid_rcpt	-	no_errors	RXRA	HGNC	ENSG00000186350				205	0	0	122	61	33.3333
PPP1R26	0	genome.wustl.edu	37	9	138379776	138379776	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	138379776	138379776	C	T	SNP	PPP1R26	ENST00000356818	human	ensembl	74_37	+1	known	silent	c.3420	p.D1140	0.001	NULL	NULL	-	no_errors	PPP1R26	HGNC	ENSG00000196422				79	0	0	29	11	27.5
OBP2A	0	genome.wustl.edu	37	9	138438642	138438642	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	138438642	138438642	G	A	SNP	OBP2A	ENST00000340780	human	ensembl	74_37	+1	known	missense	c.91	p.V31M	0.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_von_Ebner_gland	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_von_Ebner_gland	-	no_errors	OBP2A	HGNC	ENSG00000122136				32	0	0	21	5	19.2308
KCNT1	0	genome.wustl.edu	37	9	138657599	138657599	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	138657599	138657599	C	T	SNP	KCNT1	ENST00000298480	human	ensembl	74_37	+1	known	nonsense	c.1330	p.R444*	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT1	HGNC	ENSG00000107147				24	0	0	18	10	35.7143
CAMSAP1	0	genome.wustl.edu	37	9	138703236	138703236	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	138703236	138703236	A	C	SNP	CAMSAP1	ENST00000409386	human	ensembl	74_37	-1	known	missense	c.4761	p.S1587R	0.909	pfam_CKK_domain,superfamily_PRC_barrel-like	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP1	HGNC	ENSG00000130559				23	0	0	17	6	26.087
QSOX2	0	genome.wustl.edu	37	9	139137477	139137477	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	139137477	139137477	G	A	SNP	QSOX2	ENST00000358701	human	ensembl	74_37	-1	known	missense	c.173	p.A58V	0.997	superfamily_Thioredoxin-like_fold	pfam_ERV/ALR_sulphydryl_oxidase,pfam_Thioredoxin_domain,superfamily_ERV/ALR_sulphydryl_oxidase,superfamily_Thioredoxin-like_fold	-	no_errors	QSOX2	HGNC	ENSG00000165661				12	0	0	12	6	33.3333
NOTCH1	0	genome.wustl.edu	37	9	139396207	139396207	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	139396207	139396207	G	A	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	silent	c.5631	p.R1877	0.439	pirsf_Notch,pfscan_Ankyrin_rpt-contain_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				58	0	0	31	11	26.1905
C9orf172	0	genome.wustl.edu	37	9	139740046	139740046	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	139740046	139740046	C	T	SNP	C9orf172	ENST00000436881	human	ensembl	74_37	+1	known	missense	c.1180	p.H394Y	0.001	NULL	NULL	-	no_errors	C9orf172	HGNC	ENSG00000232434				26	0	0	17	7	29.1667
PHPT1	0	genome.wustl.edu	37	9	139745008	139745008	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	139745008	139745008	T	A	SNP	PHPT1	ENST00000371661	human	ensembl	74_37	+1	known	missense	c.336	p.H112Q	0.001	NULL	pfam_Ocnus	-	no_errors	PHPT1	HGNC	ENSG00000054148				33	0	0	25	5	16.6667
CACNA1B	0	genome.wustl.edu	37	9	141015984	141015984	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	141015984	141015984	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.6556	p.G2186S	0.736	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				39	0	0	21	10	32.2581
TUBBP5	0	genome.wustl.edu	37	9	141070209	141070209	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	141070209	141070209	G	A	SNP	TUBBP5	ENST00000503395	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.737	-	-	-	no_errors	TUBBP5	HGNC	ENSG00000159247				40	0	0	17	5	22.7273
CCDC171	0	genome.wustl.edu	37	9	15745548	15745548	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	15745548	15745548	C	A	SNP	CCDC171	ENST00000380701	human	ensembl	74_37	+1	known	missense	c.2590	p.L864I	0.055	NULL	superfamily_STAT_TF_coiled-coil	-	no_errors	CCDC171	HGNC	ENSG00000164989				208	0	0	117	47	28.6585
SLC24A2	0	genome.wustl.edu	37	9	19516162	19516162	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	19516162	19516162	C	T	SNP	SLC24A2	ENST00000341998	human	ensembl	74_37	-1	known	missense	c.1975	p.V659I	0.996	NULL	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A2	HGNC	ENSG00000155886				373	2	0.533333	196	52	20.9677
SMARCA2	0	genome.wustl.edu	37	9	2039686	2039686	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	2039686	2039686	G	A	SNP	SMARCA2	ENST00000349721	human	ensembl	74_37	+1	known	silent	c.576	p.L192	1.000	pfam_Gln-Leu-Gln_QLQ,smart_Gln-Leu-Gln_QLQ	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,superfamily_RNaseH-like_dom,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	SMARCA2	HGNC	ENSG00000080503				132	0	0	54	20	27.027
CDKN2A	0	genome.wustl.edu	37	9	21971114	21971114	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	21971114	21971114	C	T	SNP	CDKN2A	ENST00000361570	human	ensembl	74_37	-1	known	missense	c.410	p.R137H	0.984	NULL	pfam_Cyclin_kinase-Inhib_2A	-	no_errors	CDKN2A	HGNC	ENSG00000147889				70	0	0	48	15	23.8095
VLDLR	0	genome.wustl.edu	37	9	2645662	2645662	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	2645662	2645662	G	T	SNP	VLDLR	ENST00000382100	human	ensembl	74_37	+1	known	missense	c.1401	p.Q467H	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	VLDLR	HGNC	ENSG00000147852				213	0	0	149	35	19.0217
KIAA0020	0	genome.wustl.edu	37	9	2837315	2837315	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	2837315	2837315	T	A	SNP	KIAA0020	ENST00000397885	human	ensembl	74_37	-1	known	missense	c.169	p.I57F	0.998	NULL	pfam_CPL,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	KIAA0020	HGNC	ENSG00000080608				157	0	0	61	29	32.2222
TOPORS	0	genome.wustl.edu	37	9	32543988	32543988	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	32543988	32543988	G	A	SNP	TOPORS	ENST00000360538	human	ensembl	74_37	-1	known	missense	c.535	p.R179C	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TOPORS	HGNC	ENSG00000197579				97	0	0	66	4	5.71429
SMU1	0	genome.wustl.edu	37	9	33056197	33056197	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	33056197	33056197	G	A	SNP	SMU1	ENST00000397149	human	ensembl	74_37	-1	known	missense	c.1036	p.R346C	1.000	pfam_WD40_repeat,pfam_Nucleoporin_Nup160,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Nucleoporin_Nup160,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_CTLH_C,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_CTLH_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SMU1	HGNC	ENSG00000122692				40	0	0	22	6	21.4286
KIAA1161	0	genome.wustl.edu	37	9	34370908	34370908	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	34370908	34370908	G	A	SNP	KIAA1161	ENST00000297625	human	ensembl	74_37	-1	known	silent	c.1932	p.P644	0.027	pfam_Glyco_hydro_31	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	-	no_errors	KIAA1161	HGNC	ENSG00000164976				74	0	0	64	22	25.5814
CCIN	0	genome.wustl.edu	37	9	36170715	36170715	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	36170715	36170715	G	A	SNP	CCIN	ENST00000335119	human	ensembl	74_37	+1	known	missense	c.1216	p.A406T	1.000	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	CCIN	HGNC	ENSG00000185972				148	0	0	88	27	23.4783
INSL4	0	genome.wustl.edu	37	9	5231719	5231719	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	5231719	5231719	G	A	SNP	INSL4	ENST00000239316	human	ensembl	74_37	+1	known	missense	c.196	p.E66K	0.002	superfamily_Insulin-like,prints_Placentin	superfamily_Insulin-like,prints_Placentin,prints_Relaxin	-	no_errors	INSL4	HGNC	ENSG00000120211				48	0	0	29	14	32.5581
LOC100996870	0	genome.wustl.edu	37	9	66466389	66466389	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	66466389	66466389	G	A	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				8	0	0	5	3	37.5
ENSG00000227582	0	genome.wustl.edu	37	9	66517632	66517632	+	RNA	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	66517632	66517632	A	G	SNP	ENSG00000227582	ENST00000590130	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.137	-	-	-	no_errors	RP11-262H14.7	Clone_based_vega_gene	ENSG00000227582				154	0	0	108	14	11.4754
PRKACG	0	genome.wustl.edu	37	9	71628547	71628547	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	71628547	71628547	G	T	SNP	PRKACG	ENST00000377276	human	ensembl	74_37	-1	known	silent	c.462	p.A154	0.941	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059				57	0	0	25	7	21.875
PRKACG	0	genome.wustl.edu	37	9	71628605	71628605	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	71628605	71628605	C	T	SNP	PRKACG	ENST00000377276	human	ensembl	74_37	-1	known	missense	c.404	p.R135H	0.179	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059				75	0	0	45	7	13.4615
SMC5	0	genome.wustl.edu	37	9	72913007	72913007	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	72913007	72913007	C	T	SNP	SMC5	ENST00000361138	human	ensembl	74_37	+1	known	silent	c.1179	p.C393	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	-	no_errors	SMC5	HGNC	ENSG00000198887				99	0	0	69	20	22.4719
FOXB2	0	genome.wustl.edu	37	9	79635850	79635850	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	79635850	79635850	C	T	SNP	FOXB2	ENST00000376708	human	ensembl	74_37	+1	known	missense	c.1280	p.S427L	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head,prints_Antifreeze_1	-	no_errors	FOXB2	HGNC	ENSG00000204612				11	0	0	10	5	33.3333
ZCCHC6	0	genome.wustl.edu	37	9	88960693	88960693	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	88960693	88960693	C	T	SNP	ZCCHC6	ENST00000375963	human	ensembl	74_37	-1	known	missense	c.710	p.R237Q	0.997	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_U1,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC6	HGNC	ENSG00000083223				52	0	0	38	10	20.8333
DAPK1	0	genome.wustl.edu	37	9	90315079	90315079	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	90315079	90315079	C	T	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	missense	c.2798	p.A933V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730				126	0	0	82	21	20.3883
SECISBP2	0	genome.wustl.edu	37	9	91964832	91964832	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	91964832	91964832	G	A	SNP	SECISBP2	ENST00000375807	human	ensembl	74_37	+1	known	missense	c.1880	p.R627H	1.000	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2	HGNC	ENSG00000187742				89	0	0	48	16	25
SEMA4D	0	genome.wustl.edu	37	9	92003589	92003589	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	92003589	92003589	G	A	SNP	SEMA4D	ENST00000356444	human	ensembl	74_37	-1	known	missense	c.1069	p.R357C	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,pfam_Immunoglobulin,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764				66	0	0	43	18	29.5082
SPTLC1	0	genome.wustl.edu	37	9	94809549	94809549	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	94809549	94809549	C	T	SNP	SPTLC1	ENST00000262554	human	ensembl	74_37	-1	known	missense	c.986	p.R329Q	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	SPTLC1	HGNC	ENSG00000090054				81	0	0	60	22	26.8293
SPTLC1	0	genome.wustl.edu	37	9	94870946	94870946	+	RNA	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	94870946	94870946	A	G	SNP	SPTLC1	ENST00000461132	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SPTLC1	HGNC	ENSG00000090054				54	0	0	23	12	34.2857
IPPK	0	genome.wustl.edu	37	9	95397511	95397511	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	95397511	95397511	C	T	SNP	IPPK	ENST00000287996	human	ensembl	74_37	-1	known	silent	c.996	p.L332	1.000	pfam_Ins_P5_2-kin	pfam_Ins_P5_2-kin	-	no_errors	IPPK	HGNC	ENSG00000127080				84	0	0	56	18	24.3243
BICD2	0	genome.wustl.edu	37	9	95481295	95481295	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	95481295	95481295	G	T	SNP	BICD2	ENST00000356884	human	ensembl	74_37	-1	known	nonsense	c.1632	p.C544*	1.000	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc	-	no_errors	BICD2	HGNC	ENSG00000185963				163	0	0	107	30	21.8978
ZNF484	0	genome.wustl.edu	37	9	95610082	95610082	+	Silent	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	95610082	95610082	T	C	SNP	ZNF484	ENST00000395506	human	ensembl	74_37	-1	known	silent	c.993	p.K331	0.015	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF484	HGNC	ENSG00000127081				95	0	0	50	19	27.5362
PHF2	0	genome.wustl.edu	37	9	96435920	96435920	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	96435920	96435920	T	C	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	missense	c.2402	p.M801T	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				80	0	0	64	18	21.9512
MT-ND5	0	genome.wustl.edu	37	MT	12926	12926	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	MT	12926	12926	A	G	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.590	p.D197G	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786				326	0	0	26	25	49.0196
WWC3	0	genome.wustl.edu	37	X	10085333	10085333	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	10085333	10085333	C	T	SNP	WWC3	ENST00000380861	human	ensembl	74_37	+1	known	missense	c.1234	p.R412C	1.000	NULL	superfamily_C2_dom	-	no_errors	WWC3	HGNC	ENSG00000047644				205	0	0	94	42	30.8824
ZMAT1	0	genome.wustl.edu	37	X	101138596	101138596	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	101138596	101138596	G	A	SNP	ZMAT1	ENST00000372782	human	ensembl	74_37	-1	known	silent	c.1803	p.S601	0.007	NULL	superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZMAT1	HGNC	ENSG00000166432				155	0	0	83	30	26.5487
GPRASP1	0	genome.wustl.edu	37	X	101912159	101912159	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	101912159	101912159	G	A	SNP	GPRASP1	ENST00000361600	human	ensembl	74_37	+1	known	silent	c.3318	p.Q1106	0.012	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP1	HGNC	ENSG00000198932				229	0	0	151	39	20.5263
BEX1	0	genome.wustl.edu	37	X	102318161	102318161	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	102318161	102318161	C	T	SNP	BEX1	ENST00000372728	human	ensembl	74_37	-1	known	missense	c.42	p.M14I	0.263	pfam_TF_A-like/BEX-like,pirsf_BEX	pfam_TF_A-like/BEX-like,pirsf_BEX	-	no_errors	BEX1	HGNC	ENSG00000133169				349	0	0	183	74	28.7938
RAB9B	0	genome.wustl.edu	37	X	103080513	103080513	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	103080513	103080513	G	A	SNP	RAB9B	ENST00000243298	human	ensembl	74_37	-1	known	missense	c.202	p.R68C	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB9B	HGNC	ENSG00000123570				113	0	0	76	30	28.3019
SLC25A53	0	genome.wustl.edu	37	X	103349129	103349129	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	103349129	103349129	C	T	SNP	SLC25A53	ENST00000357421	human	ensembl	74_37	-1	known	missense	c.812	p.R271H	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A53	HGNC	ENSG00000176274				69	0	0	40	21	34.4262
MORC4	0	genome.wustl.edu	37	X	106236506	106236506	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	106236506	106236506	C	T	SNP	MORC4	ENST00000355610	human	ensembl	74_37	-1	known	missense	c.262	p.D88N	1.000	pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd	pfam_Znf_CW,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Prefoldin,pfscan_Znf_CW	-	no_errors	MORC4	HGNC	ENSG00000133131				120	0	0	63	23	26.7442
IRS4	0	genome.wustl.edu	37	X	107976125	107976125	+	Silent	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	107976125	107976125	G	T	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	silent	c.3450	p.A1150	0.000	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124				236	0	0	139	53	27.6042
AMMECR1	0	genome.wustl.edu	37	X	109561047	109561047	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	109561047	109561047	G	A	SNP	AMMECR1	ENST00000262844	human	ensembl	74_37	-1	known	silent	c.253	p.L85	1.000	NULL	pfam_AMMECR1_domain,superfamily_AMMECR1_domain,pfscan_AMMECR1_domain,tigrfam_AMMECR1	-	no_errors	AMMECR1	HGNC	ENSG00000101935				11	0	0	4	6	60
HCCS	0	genome.wustl.edu	37	X	11139095	11139095	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	11139095	11139095	G	A	SNP	HCCS	ENST00000321143	human	ensembl	74_37	+1	known	missense	c.590	p.R197Q	0.969	pfam_Cyt_C/C1_haem_lyase	pfam_Cyt_C/C1_haem_lyase	-	no_errors	HCCS	HGNC	ENSG00000004961				183	0	0	105	27	20.4545
LHFPL1	0	genome.wustl.edu	37	X	111914299	111914299	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	111914299	111914299	C	T	SNP	LHFPL1	ENST00000371968	human	ensembl	74_37	-1	known	missense	c.320	p.C107Y	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL1	HGNC	ENSG00000182508				85	0	0	64	20	23.8095
RHOXF2	0	genome.wustl.edu	37	X	119293198	119293198	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	119293198	119293198	G	A	SNP	RHOXF2	ENST00000371388	human	ensembl	74_37	+1	known	silent	c.357	p.S119	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	RHOXF2	HGNC	ENSG00000131721				91	0	0	65	7	9.72222
ZBTB33	0	genome.wustl.edu	37	X	119387796	119387796	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	119387796	119387796	G	A	SNP	ZBTB33	ENST00000326624	human	ensembl	74_37	+1	known	missense	c.526	p.E176K	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB33	HGNC	ENSG00000177485				60	0	0	33	13	28.2609
THOC2	0	genome.wustl.edu	37	X	122799612	122799612	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	122799612	122799612	T	C	SNP	THOC2	ENST00000245838	human	ensembl	74_37	-1	known	missense	c.1267	p.S423G	0.900	NULL	pfam_THO_THOC2_C,pfam_THO_THOC2_N	-	no_errors	THOC2	HGNC	ENSG00000125676				139	0	0	76	22	22.449
SMARCA1	0	genome.wustl.edu	37	X	128614736	128614736	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	128614736	128614736	C	T	SNP	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	missense	c.2384	p.R795H	1.000	pfam_ISWI_HAND-dom,superfamily_ISWI_HAND-dom	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038				74	0	0	42	8	16
SASH3	0	genome.wustl.edu	37	X	128927705	128927705	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	128927705	128927705	G	A	SNP	SASH3	ENST00000356892	human	ensembl	74_37	+1	known	missense	c.1040	p.R347H	0.969	NULL	pfam_rSAM/SH3_domain-containing,pfam_SAM_2,pfam_SAM_type1,pfam_SH3_2,superfamily_SAM/pointed,superfamily_SH3_domain,smart_SH3_domain,smart_SAM,pfscan_SAM	-	no_errors	SASH3	HGNC	ENSG00000122122				51	0	0	38	14	26.9231
TLR7	0	genome.wustl.edu	37	X	12904062	12904062	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	12904062	12904062	C	T	SNP	TLR7	ENST00000380659	human	ensembl	74_37	+1	known	silent	c.435	p.G145	0.028	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_TIR_dom,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR7	HGNC	ENSG00000196664				165	0	0	95	31	24.6032
MAP7D3	0	genome.wustl.edu	37	X	135328224	135328224	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	135328224	135328224	C	T	SNP	MAP7D3	ENST00000370663	human	ensembl	74_37	-1	known	missense	c.199	p.A67T	0.994	NULL	pfam_MAP7	-	no_errors	MAP7D3	HGNC	ENSG00000129680				103	0	0	46	10	17.8571
ZIC3	0	genome.wustl.edu	37	X	136649822	136649822	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	136649822	136649822	C	T	SNP	ZIC3	ENST00000287538	human	ensembl	74_37	+1	known	silent	c.972	p.G324	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC3	HGNC	ENSG00000156925				295	0	0	160	57	26.2673
SOX3	0	genome.wustl.edu	37	X	139586357	139586357	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	139586357	139586357	G	A	SNP	SOX3	ENST00000370536	human	ensembl	74_37	-1	known	missense	c.869	p.P290L	1.000	NULL	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX3	HGNC	ENSG00000134595				22	0	0	10	7	41.1765
SLITRK2	0	genome.wustl.edu	37	X	144905987	144905987	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	144905987	144905987	G	A	SNP	SLITRK2	ENST00000370490	human	ensembl	74_37	+1	known	missense	c.2044	p.G682S	0.966	NULL	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK2	HGNC	ENSG00000185985				142	0	0	67	25	27.1739
GLRA2	0	genome.wustl.edu	37	X	14748344	14748344	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	14748344	14748344	C	T	SNP	GLRA2	ENST00000218075	human	ensembl	74_37	+1	known	missense	c.1096	p.R366C	1.000	superfamily_Neurotrans-gated_channel_TM,prints_Glycine_rcpt_A2,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_Glycine_rcpt_A,prints_Glycine_rcpt_A2,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRA2	HGNC	ENSG00000101958				460	0	0	262	80	23.3918
AFF2	0	genome.wustl.edu	37	X	148059471	148059471	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	148059471	148059471	T	C	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.3413	p.M1138T	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				208	0	0	116	34	22.6667
IDS	0	genome.wustl.edu	37	X	148585690	148585690	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	148585690	148585690	C	T	SNP	IDS	ENST00000340855	human	ensembl	74_37	-1	known	silent	c.237	p.A79	0.324	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	IDS	HGNC	ENSG00000010404				24	0	0	17	7	29.1667
PNMA3	0	genome.wustl.edu	37	X	152226687	152226687	+	Silent	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	152226687	152226687	A	G	SNP	PNMA3	ENST00000370264	human	ensembl	74_37	+1	known	silent	c.1275	p.V425	0.000	superfamily_Znf_CCHC,pfscan_Znf_CCHC	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	PNMA3	HGNC	ENSG00000183837				329	0	0	181	62	25.5144
ZNF275	0	genome.wustl.edu	37	X	152612323	152612323	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	152612323	152612323	G	A	SNP	ZNF275	ENST00000440091	human	ensembl	74_37	+1	known	silent	c.270	p.Q90	0.629	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF275	HGNC	ENSG00000063587				97	0	0	51	25	32.8947
ZNF275	0	genome.wustl.edu	37	X	152612855	152612855	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	152612855	152612855	G	A	SNP	ZNF275	ENST00000440091	human	ensembl	74_37	+1	known	missense	c.802	p.A268T	0.021	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF275	HGNC	ENSG00000063587				189	0	0	111	37	25
SSR4	0	genome.wustl.edu	37	X	153059974	153059974	+	RNA	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	153059974	153059974	G	A	SNP	SSR4	ENST00000482902	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SSR4	HGNC	ENSG00000180879				15	0	0	5	6	54.5455
PDZD4	0	genome.wustl.edu	37	X	153095783	153095783	+	RNA	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	153095783	153095783	C	T	SNP	PDZD4	ENST00000480418	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PDZD4	HGNC	ENSG00000067840				178	0	0	92	42	31.3433
FLNA	0	genome.wustl.edu	37	X	153578054	153578054	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	153578054	153578054	G	A	SNP	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	silent	c.7515	p.Y2505	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924				83	0	0	52	25	32.4675
GDI1	0	genome.wustl.edu	37	X	153667454	153667454	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	153667454	153667454	T	C	SNP	GDI1	ENST00000447750	human	ensembl	74_37	+1	known	missense	c.356	p.V119A	1.000	pfam_GDP_dissociation_inhibitor	pfam_GDP_dissociation_inhibitor,prints_RabGDI,prints_GDP_dissociation_inhibitor	-	no_errors	GDI1	HGNC	ENSG00000203879				198	0	0	101	31	23.4848
PLXNA3	0	genome.wustl.edu	37	X	153688788	153688788	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	153688788	153688788	C	T	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	missense	c.265	p.R89C	0.998	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827				52	0	0	36	12	25
DKC1	0	genome.wustl.edu	37	X	153996672	153996672	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	153996672	153996672	C	A	SNP	DKC1	ENST00000369550	human	ensembl	74_37	+1	known	missense	c.736	p.L246I	1.000	superfamily_PsdUridine_synth_cat_dom,tigrfam_tRNA_PsdUridine_synth_B_fam	pfam_Dyskerin-like,pfam_PsdUridine_synth,pfam_PUA,superfamily_PsdUridine_synth_cat_dom,superfamily_PUA-like_domain,smart_PUA,pfscan_PUA,tigrfam_tRNA_PsdUridine_synth_B_fam,tigrfam_Uncharacterised_CHP00451	-	no_errors	DKC1	HGNC	ENSG00000130826				242	0	0	113	42	27.0968
RAB39B	0	genome.wustl.edu	37	X	154490502	154490502	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	154490502	154490502	G	A	SNP	RAB39B	ENST00000369454	human	ensembl	74_37	-1	known	silent	c.228	p.R76	0.011	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB39B	HGNC	ENSG00000155961				264	0	0	137	54	28.2723
SH3KBP1	0	genome.wustl.edu	37	X	19560113	19560113	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	19560113	19560113	C	T	SNP	SH3KBP1	ENST00000397821	human	ensembl	74_37	-1	known	missense	c.1822	p.A608T	0.652	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SH3KBP1	HGNC	ENSG00000147010				205	0	0	145	8	5.22876
SH3KBP1	0	genome.wustl.edu	37	X	19560254	19560254	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	19560254	19560254	C	T	SNP	SH3KBP1	ENST00000397821	human	ensembl	74_37	-1	known	missense	c.1681	p.G561S	0.000	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SH3KBP1	HGNC	ENSG00000147010				85	0	0	77	26	25.2427
RPS6KA3	0	genome.wustl.edu	37	X	20195138	20195138	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	20195138	20195138	T	C	SNP	RPS6KA3	ENST00000379565	human	ensembl	74_37	-1	known	missense	c.910	p.K304E	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA3	HGNC	ENSG00000177189				114	0	0	75	21	21.875
KLHL34	0	genome.wustl.edu	37	X	21675899	21675899	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	21675899	21675899	T	C	SNP	KLHL34	ENST00000379499	human	ensembl	74_37	-1	known	missense	c.8	p.Y3C	1.000	superfamily_BTB/POZ_fold,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL34	HGNC	ENSG00000185915				92	0	0	45	9	16.6667
ZNF645	0	genome.wustl.edu	37	X	22291397	22291397	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	22291397	22291397	C	T	SNP	ZNF645	ENST00000323684	human	ensembl	74_37	+1	known	missense	c.289	p.R97C	0.051	pfscan_Znf_RING	pfscan_Znf_RING,pfscan_Znf_C2H2	-	no_errors	ZNF645	HGNC	ENSG00000175809				116	0	0	62	31	33.3333
PTCHD1	0	genome.wustl.edu	37	X	23411097	23411097	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	23411097	23411097	A	G	SNP	PTCHD1	ENST00000379361	human	ensembl	74_37	+1	known	missense	c.1462	p.K488E	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD1	HGNC	ENSG00000165186				220	0	0	127	48	27.4286
MAGEB10	0	genome.wustl.edu	37	X	27840405	27840405	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	27840405	27840405	G	A	SNP	MAGEB10	ENST00000356790	human	ensembl	74_37	+1	known	missense	c.982	p.V328I	0.000	NULL	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB10	HGNC	ENSG00000177689				49	0	0	30	11	26.8293
NR0B1	0	genome.wustl.edu	37	X	30327182	30327182	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	30327182	30327182	G	A	SNP	NR0B1	ENST00000378970	human	ensembl	74_37	-1	known	missense	c.299	p.T100M	0.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	-	no_errors	NR0B1	HGNC	ENSG00000169297				81	0	0	44	21	32.3077
DMD	0	genome.wustl.edu	37	X	31496273	31496273	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	31496273	31496273	C	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.8887	p.V2963M	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				39	0	0	23	9	28.125
FAM47A	0	genome.wustl.edu	37	X	34148203	34148203	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	34148203	34148203	G	A	SNP	FAM47A	ENST00000346193	human	ensembl	74_37	-1	known	silent	c.2193	p.D731	0.012	NULL	NULL	-	no_errors	FAM47A	HGNC	ENSG00000185448				156	0	0	76	29	27.619
TMEM47	0	genome.wustl.edu	37	X	34648577	34648577	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	34648577	34648577	G	A	SNP	TMEM47	ENST00000275954	human	ensembl	74_37	-1	known	silent	c.399	p.Y133	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	TMEM47	HGNC	ENSG00000147027				69	0	0	43	20	31.746
RPGR	0	genome.wustl.edu	37	X	38128998	38128998	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	38128998	38128998	C	A	SNP	RPGR	ENST00000339363	human	ensembl	74_37	-1	known	missense	c.2944	p.D982Y	0.877	superfamily_RCC1/BLIP-II	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313				57	0	0	37	19	33.9286
UBA1	0	genome.wustl.edu	37	X	47060960	47060960	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	47060960	47060960	G	T	SNP	UBA1	ENST00000335972	human	ensembl	74_37	+1	known	missense	c.762	p.Q254H	1.000	superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA1	HGNC	ENSG00000130985				63	0	0	31	10	24.3902
ZNF182	0	genome.wustl.edu	37	X	47842802	47842802	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	47842802	47842802	T	C	SNP	ZNF182	ENST00000305127	human	ensembl	74_37	-1	known	missense	c.82	p.T28A	0.375	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF182	HGNC	ENSG00000147118				135	0	0	60	23	27.7108
FTSJ1	0	genome.wustl.edu	37	X	48341409	48341409	+	RNA	SNP	C	C	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	48341409	48341409	C	G	SNP	FTSJ1	ENST00000467954	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.165	-	-	-	no_errors	FTSJ1	HGNC	ENSG00000068438				71	0	0	49	10	16.9492
NUDT11	0	genome.wustl.edu	37	X	51239053	51239053	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	51239053	51239053	C	T	SNP	NUDT11	ENST00000375992	human	ensembl	74_37	-1	known	missense	c.244	p.V82I	0.179	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT11	HGNC	ENSG00000196368				130	0	0	74	24	24.4898
GPR173	0	genome.wustl.edu	37	X	53106555	53106555	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	53106555	53106555	G	A	SNP	GPR173	ENST00000332582	human	ensembl	74_37	+1	known	missense	c.752	p.R251H	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR173	HGNC	ENSG00000184194				22	0	0	13	5	27.7778
PFKFB1	0	genome.wustl.edu	37	X	54978349	54978349	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	54978349	54978349	G	A	SNP	PFKFB1	ENST00000375006	human	ensembl	74_37	-1	known	missense	c.835	p.R279C	0.994	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB1	HGNC	ENSG00000158571				16	0	0	11	5	31.25
RRAGB	0	genome.wustl.edu	37	X	55777621	55777621	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	55777621	55777621	C	A	SNP	RRAGB	ENST00000262850	human	ensembl	74_37	+1	known	missense	c.688	p.L230I	1.000	pfam_Gtr1_RagA,superfamily_P-loop_NTPase	pfam_Gtr1_RagA,pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase	-	no_errors	RRAGB	HGNC	ENSG00000083750				30	0	0	15	9	37.5
ZXDA	0	genome.wustl.edu	37	X	57936148	57936148	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	57936148	57936148	G	A	SNP	ZXDA	ENST00000358697	human	ensembl	74_37	-1	known	missense	c.707	p.A236V	0.015	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDA	HGNC	ENSG00000198205				27	0	0	14	6	30
NLGN4X	0	genome.wustl.edu	37	X	5821684	5821684	+	Silent	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	5821684	5821684	G	A	SNP	NLGN4X	ENST00000381093	human	ensembl	74_37	-1	known	silent	c.1095	p.D365	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC	ENSG00000146938				177	0	0	102	34	25
P2RY4	0	genome.wustl.edu	37	X	69478463	69478463	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	69478463	69478463	C	A	SNP	P2RY4	ENST00000374519	human	ensembl	74_37	-1	known	missense	c.1012	p.V338L	0.994	prints_P2Y4_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y4_rcpt,prints_GPCR_Rhodpsn,prints_P2Y2_rcpt	-	no_errors	P2RY4	HGNC	ENSG00000186912				87	0	0	45	10	18.1818
MED12	0	genome.wustl.edu	37	X	70341237	70341237	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	70341237	70341237	C	T	SNP	MED12	ENST00000333646	human	ensembl	74_37	+1	known	missense	c.796	p.R266C	1.000	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12_catenin-bd,pfam_Mediator_Med12	-	no_errors	MED12	HGNC	ENSG00000184634				168	0	0	87	33	27.5
TAF1	0	genome.wustl.edu	37	X	70586333	70586333	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	70586333	70586333	G	A	SNP	TAF1	ENST00000449580	human	ensembl	74_37	+1	known	missense	c.169	p.V57I	1.000	pirsf_TAF1_animal,pfam_TAF_II_230-bd,superfamily_TAF_II_230-bd	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1	HGNC	ENSG00000147133				36	0	0	18	5	21.7391
OGT	0	genome.wustl.edu	37	X	70787390	70787390	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	70787390	70787390	G	A	SNP	OGT	ENST00000373719	human	ensembl	74_37	+1	known	missense	c.2630	p.R877H	1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	OGT	HGNC	ENSG00000147162				85	0	0	47	15	24.1935
RGAG4	0	genome.wustl.edu	37	X	71349880	71349880	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	71349880	71349880	C	T	SNP	RGAG4	ENST00000479991	human	ensembl	74_37	-1	known	missense	c.1511	p.S504N	0.224	NULL	pfam_Retrotrans_gag_dom	-	no_errors	RGAG4	HGNC	ENSG00000242732				63	0	0	33	11	25
NHSL2	0	genome.wustl.edu	37	X	71358762	71358762	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	71358762	71358762	C	T	SNP	NHSL2	ENST00000540800	human	ensembl	74_37	+1	known	missense	c.1364	p.A455V	0.022	NULL	NULL	-	no_errors	NHSL2	HGNC	ENSG00000204131				41	0	0	17	5	22.7273
HDAC8	0	genome.wustl.edu	37	X	71549549	71549549	+	Silent	SNP	T	T	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	71549549	71549549	T	G	SNP	HDAC8	ENST00000373583	human	ensembl	74_37	-1	putative	silent	c.175	p.R59	0.000	NULL	NULL	-	no_errors	HDAC8	HGNC	ENSG00000147099				14	0	0	7	3	30
PHKA1	0	genome.wustl.edu	37	X	71873292	71873292	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	71873292	71873292	G	A	SNP	PHKA1	ENST00000373539	human	ensembl	74_37	-1	known	missense	c.1130	p.P377L	0.995	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA1	HGNC	ENSG00000067177				30	0	0	14	10	41.6667
STS	0	genome.wustl.edu	37	X	7268249	7268249	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	7268249	7268249	G	A	SNP	STS	ENST00000217961	human	ensembl	74_37	+1	known	missense	c.1699	p.G567S	0.000	superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	STS	HGNC	ENSG00000101846				48	0	0	26	11	29.7297
KIAA2022	0	genome.wustl.edu	37	X	73963374	73963374	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	73963374	73963374	T	C	SNP	KIAA2022	ENST00000055682	human	ensembl	74_37	-1	known	missense	c.1018	p.S340G	1.000	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030				111	0	0	53	23	30.2632
POU3F4	0	genome.wustl.edu	37	X	82763850	82763850	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	82763850	82763850	G	A	SNP	POU3F4	ENST00000373200	human	ensembl	74_37	+1	known	missense	c.518	p.G173D	0.970	pirsf_Transcription_factor_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F4	HGNC	ENSG00000196767				31	0	0	16	8	33.3333
KAL1	0	genome.wustl.edu	37	X	8504931	8504931	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	8504931	8504931	G	A	SNP	KAL1	ENST00000262648	human	ensembl	74_37	-1	known	missense	c.1502	p.T501I	0.963	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_WAP-type_4-diS_core,superfamily_Fibronectin_type3,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Fibronectin_type3,pfscan_Fibronectin_type3,prints_WAP-type_4-diS_core	-	no_errors	KAL1	HGNC	ENSG00000011201				45	0	0	16	5	23.8095
CHM	0	genome.wustl.edu	37	X	85211332	85211332	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	85211332	85211332	G	T	SNP	CHM	ENST00000357749	human	ensembl	74_37	-1	known	missense	c.992	p.P331H	1.000	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort,prints_GDP_dissociation_inhibitor	-	no_errors	CHM	HGNC	ENSG00000188419				49	0	0	32	7	17.9487
CPXCR1	0	genome.wustl.edu	37	X	88008656	88008656	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	88008656	88008656	C	T	SNP	CPXCR1	ENST00000276127	human	ensembl	74_37	+1	known	nonsense	c.241	p.R81*	0.001	NULL	pfscan_Znf_C2H2	-	no_errors	CPXCR1	HGNC	ENSG00000147183				45	0	0	13	4	23.5294
PABPC5	0	genome.wustl.edu	37	X	90691323	90691323	+	Silent	SNP	C	C	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	90691323	90691323	C	T	SNP	PABPC5	ENST00000312600	human	ensembl	74_37	+1	known	silent	c.747	p.H249	0.881	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC5	HGNC	ENSG00000174740				144	0	0	84	17	16.8317
SYTL4	0	genome.wustl.edu	37	X	99931117	99931117	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	99931117	99931117	G	T	SNP	SYTL4	ENST00000454200	human	ensembl	74_37	-1	known	missense	c.1930	p.L644M	1.000	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,prints_Synaptotagmin	-	no_errors	SYTL4	HGNC	ENSG00000102362				98	0	0	67	26	27.957
WDR47	0	genome.wustl.edu	37	1	109547218	109547218	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	109547218	109547218	T	-	DEL	WDR47	ENST00000400794	human	ensembl	74_37	-1	known	frame_shift_del	c.1274	p.N425fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_CTLH_C,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_CTLH_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR47	HGNC	ENSG00000085433				123	0	0	62	17	21.519
WDR77	0	genome.wustl.edu	37	1	111991767	111991767	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	111991767	111991767	G	-	DEL	WDR77	ENST00000235090	human	ensembl	74_37	-1	known	frame_shift_del	c.25	p.L9fs	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR77	HGNC	ENSG00000116455				23	0	0	11	2	15.3846
MTMR11	0	genome.wustl.edu	37	1	149900796	149900796	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	149900796	149900796	A	-	DEL	MTMR11	ENST00000466496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				61	0	0	33	6	15.3846
MTMR11	0	genome.wustl.edu	37	1	149901010	149901011	+	RNA	DEL	AG	AG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	149901010	149901011	AG	-	DEL	MTMR11	ENST00000466496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914				86	0	0	57	5	8.06452
SNX27	0	genome.wustl.edu	37	1	151584935	151584936	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	151584935	151584936	-	G	INS	SNX27	ENST00000368843	human	ensembl	74_37	+1	known	frame_shift_ins	c.258_259	p.A88fs	1.000:1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_Phox,pfam_PDZ,pfam_Ras-assoc,superfamily_Phox,superfamily_PDZ,smart_PDZ,smart_Phox,pfscan_PDZ,pfscan_Phox,pfscan_Ras-assoc	-	no_errors	SNX27	HGNC	ENSG00000143376				22	0	0	20	6	23.0769
NUP210L	0	genome.wustl.edu	37	1	154067526	154067526	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	154067526	154067526	A	-	DEL	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	frame_shift_del	c.2072	p.L691fs	0.995	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552				63	0	0	40	8	16.6667
TPM3	0	genome.wustl.edu	37	1	154143243	154143243	+	RNA	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	154143243	154143243	C	-	DEL	TPM3	ENST00000469717	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TPM3	HGNC	ENSG00000143549				33	0	0	20	10	33.3333
PYGO2	0	genome.wustl.edu	37	1	154932027	154932028	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	154932027	154932028	-	G	INS	PYGO2	ENST00000368457	human	ensembl	74_37	-1	known	frame_shift_ins	c.449_448	p.Q150fs	1.000:0.997	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO2	HGNC	ENSG00000163348				135	0	0	103	6	5.50459
EFNA3	0	genome.wustl.edu	37	1	155059036	155059036	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	155059036	155059036	G	-	DEL	EFNA3	ENST00000470294	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EFNA3	HGNC	ENSG00000143590				126	0	0	76	22	22.449
TMEM79	0	genome.wustl.edu	37	1	156262733	156262733	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	156262733	156262733	G	-	DEL	TMEM79	ENST00000485135	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	TMEM79	HGNC	ENSG00000163472				31	0	0	20	9	31.0345
ISG20L2	0	genome.wustl.edu	37	1	156694022	156694023	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	156694022	156694023	-	G	INS	ISG20L2	ENST00000313146	human	ensembl	74_37	-1	known	frame_shift_ins	c.866_865	p.L289fs	1.000:0.997	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	ISG20L2	HGNC	ENSG00000143319				179	1	0.555556	115	24	17.2662
VANGL2	0	genome.wustl.edu	37	1	160388802	160388802	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	160388802	160388802	G	-	DEL	VANGL2	ENST00000368061	human	ensembl	74_37	+1	known	frame_shift_del	c.203	p.E70fs	1.000	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL2	HGNC	ENSG00000162738				198	0	0	112	19	14.5038
EPHA2	0	genome.wustl.edu	37	1	16462199	16462199	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	16462199	16462199	G	-	DEL	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	frame_shift_del	c.1379	p.P460fs	0.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627				123	1	0.806452	85	11	11.4583
SLC19A2	0	genome.wustl.edu	37	1	169446809	169446809	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	169446809	169446809	A	-	DEL	SLC19A2	ENST00000236137	human	ensembl	74_37	-1	known	frame_shift_del	c.391	p.Y131fs	1.000	pfam_Folate_carrier,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier	pfam_Folate_carrier,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier	-	no_errors	SLC19A2	HGNC	ENSG00000117479				132	0	0	75	20	21.0526
RCC2	0	genome.wustl.edu	37	1	17739612	17739614	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	17739612	17739614	CTG	-	DEL	RCC2	ENST00000375433	human	ensembl	74_37	-1	known	in_frame_del	c.1270_1268	p.A423in_frame_del	1.000:0.994:1.000	superfamily_RCC1/BLIP-II	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,prints_Reg_chr_condens,pfscan_Reg_chr_condens	-	no_errors	RCC2	HGNC	ENSG00000179051				50	0	0	39	16	29.0909
CEP350	0	genome.wustl.edu	37	1	180064806	180064806	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	180064806	180064806	A	-	DEL	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	frame_shift_del	c.8660	p.N2889fs	0.152	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837				70	0	0	52	10	16.129
SHCBP1L	0	genome.wustl.edu	37	1	182908531	182908531	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	182908531	182908531	T	-	DEL	SHCBP1L	ENST00000367547	human	ensembl	74_37	-1	known	splice_site_del	c.858-2	e5-2	0.998	-	-	-	no_errors	SHCBP1L	HGNC	ENSG00000157060				43	0	0	23	3	11.5385
TSEN15	0	genome.wustl.edu	37	1	184023967	184023967	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	184023967	184023967	C	-	DEL	TSEN15	ENST00000361641	human	ensembl	74_37	+1	known	frame_shift_del	c.323	p.I110fs	0.804	pfam_tRNA-endonuc_su_Sen15	pfam_tRNA-endonuc_su_Sen15	-	no_errors	TSEN15	HGNC	ENSG00000198860				24	0	0	11	3	21.4286
GABRD	0	genome.wustl.edu	37	1	1961598	1961598	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	1961598	1961598	G	-	DEL	GABRD	ENST00000378585	human	ensembl	74_37	+1	known	frame_shift_del	c.1236	p.G414fs	0.000	superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAd_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRD	HGNC	ENSG00000187730				196	0	0	123	29	19.0789
ASPM	0	genome.wustl.edu	37	1	197072396	197072396	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	197072396	197072396	T	-	DEL	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	frame_shift_del	c.5985	p.A1996fs	0.192	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279				122	0	0	57	19	25
NEK7	0	genome.wustl.edu	37	1	198222297	198222298	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	198222297	198222298	-	A	INS	NEK7	ENST00000367385	human	ensembl	74_37	+1	known	frame_shift_ins	c.185_186	p.V65fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK7	HGNC	ENSG00000151414				93	0	0	65	17	20.7317
LMOD1	0	genome.wustl.edu	37	1	201869807	201869808	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	201869807	201869808	-	T	INS	LMOD1	ENST00000367288	human	ensembl	74_37	-1	known	frame_shift_ins	c.334_333	p.A111fs	0.000:0.004	NULL	pfam_Tropomodulin,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	LMOD1	HGNC	ENSG00000163431				142	0	0	110	16	12.6984
KDM5B	0	genome.wustl.edu	37	1	202704625	202704625	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	202704625	202704625	T	-	DEL	KDM5B	ENST00000367264	human	ensembl	74_37	-1	known	frame_shift_del	c.3463	p.S1155fs	0.000	NULL	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5B	HGNC	ENSG00000117139				104	0	0	67	20	22.9885
REN	0	genome.wustl.edu	37	1	204124957	204124958	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	204124957	204124958	AT	-	DEL	REN	ENST00000272190	human	ensembl	74_37	-1	known	frame_shift_del	c.1050_1049	p.Y350fs	0.983:1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	REN	HGNC	ENSG00000143839				27	0	0	30	10	25
IKBKE	0	genome.wustl.edu	37	1	206647728	206647728	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	206647728	206647728	C	-	DEL	IKBKE	ENST00000367120	human	ensembl	74_37	+1	known	frame_shift_del	c.142	p.R49fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IKBKE	HGNC	ENSG00000143466				79	0	0	57	12	17.3913
CR2	0	genome.wustl.edu	37	1	207642044	207642044	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	207642044	207642044	C	-	DEL	CR2	ENST00000367057	human	ensembl	74_37	+1	known	frame_shift_del	c.618	p.T209fs	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322				178	1	0.558659	84	48	36.3636
KCNH1	0	genome.wustl.edu	37	1	210857113	210857113	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	210857113	210857113	C	-	DEL	KCNH1	ENST00000271751	human	ensembl	74_37	-1	known	frame_shift_del	c.2480	p.G827fs	0.014	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH1	HGNC	ENSG00000143473				158	0	0	96	19	16.5217
PTPN14	0	genome.wustl.edu	37	1	214556665	214556666	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	214556665	214556666	TC	-	DEL	PTPN14	ENST00000366956	human	ensembl	74_37	-1	known	frame_shift_del	c.2533_2532	p.E844fs	1.000:1.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104				91	0	0	66	16	19.5122
IARS2	0	genome.wustl.edu	37	1	220311241	220311241	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	220311241	220311241	T	-	DEL	IARS2	ENST00000488777	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IARS2	HGNC	ENSG00000067704				45	0	0	34	13	27.6596
TP53BP2	0	genome.wustl.edu	37	1	223971921	223971923	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	223971921	223971923	CTT	-	DEL	TP53BP2	ENST00000343537	human	ensembl	74_37	-1	known	in_frame_del	c.3259_3257	p.E1086in_frame_del	1.000:1.000:1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	TP53BP2	HGNC	ENSG00000143514				151	0	0	109	25	18.6567
ADCK3	0	genome.wustl.edu	37	1	227152946	227152947	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	227152946	227152947	-	A	INS	ADCK3	ENST00000366777	human	ensembl	74_37	+1	known	frame_shift_ins	c.423_424	p.N141fs	0.000:0.000	NULL	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK3	HGNC	ENSG00000163050				54	0	0	28	11	28.2051
SPRTN	0	genome.wustl.edu	37	1	231487256	231487256	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	231487256	231487256	A	-	DEL	SPRTN	ENST00000295050	human	ensembl	74_37	+1	known	frame_shift_del	c.657	p.G222fs	0.002	NULL	pfam_SprT-like_domain,smart_SprT-like_domain,smart_Znf_Rad18_put	-	no_errors	SPRTN	HGNC	ENSG00000010072				106	1	0.934579	56	25	30.8642
EPHB2	0	genome.wustl.edu	37	1	23240246	23240246	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	23240246	23240246	A	-	DEL	EPHB2	ENST00000400191	human	ensembl	74_37	+1	known	frame_shift_del	c.3051	p.K1020fs	0.270	NULL	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHB2	HGNC	ENSG00000133216				19	0	0	16	6	27.2727
ENSG00000228830	0	genome.wustl.edu	37	1	234742799	234742800	+	RNA	INS	-	-	AT			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	234742799	234742800	-	AT	INS	ENSG00000228830	ENST00000436039	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	RP4-781K5.2	Clone_based_vega_gene	ENSG00000228830				33	0	0	19	8	29.6296
RYR2	0	genome.wustl.edu	37	1	237540677	237540677	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	237540677	237540677	A	-	DEL	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	frame_shift_del	c.512	p.V173fs	1.000	pfam_Ins145_P3_rcpt,superfamily_MIR_motif,smart_MIR_motif,prints_Ryan_recept	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				82	0	0	37	13	26
CHRM3	0	genome.wustl.edu	37	1	240072444	240072444	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	240072444	240072444	A	-	DEL	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	frame_shift_del	c.1693	p.K567fs	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019				90	0	0	69	17	19.7674
SDCCAG8	0	genome.wustl.edu	37	1	243456462	243456462	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	243456462	243456462	T	-	DEL	SDCCAG8	ENST00000366541	human	ensembl	74_37	+1	known	frame_shift_del	c.616	p.S207fs	0.009	NULL	NULL	-	no_errors	SDCCAG8	HGNC	ENSG00000054282				125	0	0	78	14	15.2174
ZNF124	0	genome.wustl.edu	37	1	247319909	247319909	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	247319909	247319909	T	-	DEL	ZNF124	ENST00000543802	human	ensembl	74_37	-1	known	frame_shift_del	c.1015	p.T339fs	0.935	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF124	HGNC	ENSG00000196418				45	0	0	52	9	14.7541
SH3BP5L	0	genome.wustl.edu	37	1	249119229	249119231	+	RNA	DEL	AGG	AGG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	249119229	249119231	AGG	-	DEL	SH3BP5L	ENST00000475978	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.003:0.007	-	-	-	no_errors	SH3BP5L	HGNC	ENSG00000175137				24	0	0	15	3	16.6667
ARID1A	0	genome.wustl.edu	37	1	27100175	27100176	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	27100175	27100176	-	C	INS	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_ins	c.3971_3972	p.Q1327fs	1.000:1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				201	0	0	109	31	22.1429
ARID1A	0	genome.wustl.edu	37	1	27106804	27106804	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	27106804	27106804	C	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.6415	p.F2141fs	0.999	pfam_DUF3518,superfamily_ARM-type_fold	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				216	0	0	140	45	24.3243
GPN2	0	genome.wustl.edu	37	1	27216284	27216284	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	27216284	27216284	G	-	DEL	GPN2	ENST00000374135	human	ensembl	74_37	-1	known	frame_shift_del	c.304	p.L102fs	0.989	pfam_Uncharacterised_ATP-bd,superfamily_P-loop_NTPase	pfam_Uncharacterised_ATP-bd,superfamily_P-loop_NTPase	-	no_errors	GPN2	HGNC	ENSG00000142751				139	0	0	103	26	20.155
STX12	0	genome.wustl.edu	37	1	28128196	28128197	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	28128196	28128197	AG	-	DEL	STX12	ENST00000373943	human	ensembl	74_37	+1	known	frame_shift_del	c.296_297	p.R100fs	1.000:1.000	pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX12	HGNC	ENSG00000117758				57	0	0	33	12	26.6667
PTP4A2	0	genome.wustl.edu	37	1	32384717	32384717	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	32384717	32384717	A	-	DEL	PTP4A2	ENST00000532289	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTP4A2	HGNC	ENSG00000184007				17	0	0	15	3	16.6667
YARS	0	genome.wustl.edu	37	1	33245834	33245834	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	33245834	33245834	C	-	DEL	YARS	ENST00000373477	human	ensembl	74_37	-1	known	frame_shift_del	c.1186	p.E396fs	1.000	pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,pfscan_tRNA-bd_dom	pfam_aa-tRNA-synth_Ic,pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,prints_Tyr-tRNA-ligase,pfscan_tRNA-bd_dom,tigrfam_Tyr-tRNA-ligase	-	no_errors	YARS	HGNC	ENSG00000134684				319	0	0	172	46	21.1009
ENSG00000271554	0	genome.wustl.edu	37	1	36475027	36475027	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	36475027	36475027	A	-	DEL	ENSG00000271554	ENST00000479395	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	RP4-665N4.8	Clone_based_vega_gene	ENSG00000271554				33	0	0	36	11	23.4043
MYCL	0	genome.wustl.edu	37	1	40366986	40366987	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	40366986	40366987	-	G	INS	MYCL	ENST00000372816	human	ensembl	74_37	-1	known	frame_shift_ins	c.121_120	p.T40fs	1.000:1.000	pfam_Tscrpt_reg_Myc_N,prints_Tscrpt_reg_Myc	pfam_Tscrpt_reg_Myc_N,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom,prints_Tscrpt_reg_Myc	-	no_errors	MYCL	HGNC	ENSG00000116990				22	0	0	16	4	20
CTPS1	0	genome.wustl.edu	37	1	41462979	41462979	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	41462979	41462979	T	-	DEL	CTPS1	ENST00000486889	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	CTPS1	HGNC	ENSG00000171793				41	0	0	26	5	16.129
SZT2	0	genome.wustl.edu	37	1	43896326	43896327	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	43896326	43896327	-	G	INS	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	frame_shift_ins	c.4469_4470	p.D1493fs	1.000:1.000	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198				255	0	0	181	41	18.4685
CYP4Z1	0	genome.wustl.edu	37	1	47581140	47581140	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	47581140	47581140	A	-	DEL	CYP4Z1	ENST00000471598	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	CYP4Z1	HGNC	ENSG00000186160				22	0	0	3	8	72.7273
PODN	0	genome.wustl.edu	37	1	53543377	53543377	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	53543377	53543377	C	-	DEL	PODN	ENST00000312553	human	ensembl	74_37	+1	known	frame_shift_del	c.903	p.P303fs	0.997	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PODN	HGNC	ENSG00000174348				306	0	0	223	43	16.1654
INADL	0	genome.wustl.edu	37	1	62253579	62253580	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	62253579	62253580	-	C	INS	INADL	ENST00000371158	human	ensembl	74_37	+1	known	frame_shift_ins	c.1003_1004	p.A338fs	0.037:0.133	superfamily_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_L27,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	INADL	HGNC	ENSG00000132849				112	0	0	75	11	12.7907
LRRIQ3	0	genome.wustl.edu	37	1	74575213	74575213	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	74575213	74575213	T	-	DEL	LRRIQ3	ENST00000354431	human	ensembl	74_37	-1	known	frame_shift_del	c.732	p.K244fs	0.004	pfscan_IQ_motif_EF-hand-BS	pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620				83	0	0	51	18	26.087
GBP3	0	genome.wustl.edu	37	1	89473442	89473442	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	89473442	89473442	T	-	DEL	GBP3	ENST00000370481	human	ensembl	74_37	-1	known	frame_shift_del	c.1753	p.T585fs	0.000	NULL	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP3	HGNC	ENSG00000117226				165	0	0	95	16	14.4144
TGFBR3	0	genome.wustl.edu	37	1	92224226	92224226	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	1	92224226	92224226	G	-	DEL	TGFBR3	ENST00000212355	human	ensembl	74_37	-1	known	frame_shift_del	c.328	p.L110fs	0.997	NULL	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	TGFBR3	HGNC	ENSG00000069702				147	0	0	87	29	25
BTRC	0	genome.wustl.edu	37	10	103310572	103310573	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	103310572	103310573	-	C	INS	BTRC	ENST00000370187	human	ensembl	74_37	+1	known	frame_shift_ins	c.1773_1774	p.R593fs	0.998:1.000	NULL	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	BTRC	HGNC	ENSG00000166167				115	0	0	72	21	22.5806
C10orf76	0	genome.wustl.edu	37	10	103649305	103649306	+	RNA	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	103649305	103649306	-	A	INS	C10orf76	ENST00000495001	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.231:0.054	-	-	-	no_errors	C10orf76	HGNC	ENSG00000120029				90	0	0	56	13	18.8406
PRDX3	0	genome.wustl.edu	37	10	120934108	120934108	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	120934108	120934108	A	-	DEL	PRDX3	ENST00000463322	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.384	-	-	-	no_errors	PRDX3	HGNC	ENSG00000165672				48	0	0	23	12	34.2857
ANKRD26	0	genome.wustl.edu	37	10	27322259	27322259	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	27322259	27322259	T	-	DEL	ANKRD26	ENST00000436985	human	ensembl	74_37	-1	known	frame_shift_del	c.3750	p.K1250fs	0.005	NULL	pfam_DUF3496,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Polyketide_synth_docking,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD26	HGNC	ENSG00000107890				79	0	0	42	8	16
CUL2	0	genome.wustl.edu	37	10	35351915	35351916	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	35351915	35351916	-	A	INS	CUL2	ENST00000537177	human	ensembl	74_37	-1	known	frame_shift_ins	c.252_251	p.L84fs	1.000:1.000	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL2	HGNC	ENSG00000108094				60	0	0	35	9	20.4545
ZNF239	0	genome.wustl.edu	37	10	44053545	44053547	+	RNA	DEL	AGG	AGG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	44053545	44053547	AGG	-	DEL	ZNF239	ENST00000491188	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.019:0.002:0.000	-	-	-	no_errors	ZNF239	HGNC	ENSG00000196793				20	0	0	10	3	23.0769
MAPK8	0	genome.wustl.edu	37	10	49643087	49643087	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	49643087	49643087	G	-	DEL	MAPK8	ENST00000459755	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.531	-	-	-	no_errors	MAPK8	HGNC	ENSG00000107643				171	0	0	70	30	30
ANK3	0	genome.wustl.edu	37	10	62149221	62149221	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	62149221	62149221	T	-	DEL	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	frame_shift_del	c.76	p.R26fs	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				118	0	0	57	19	25
HNRNPH3	0	genome.wustl.edu	37	10	70101327	70101328	+	RNA	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	70101327	70101328	-	T	INS	HNRNPH3	ENST00000478698	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	HNRNPH3	HGNC	ENSG00000096746				41	0	0	24	5	17.2414
H2AFY2	0	genome.wustl.edu	37	10	71851665	71851665	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	71851665	71851665	G	-	DEL	H2AFY2	ENST00000373255	human	ensembl	74_37	+1	known	frame_shift_del	c.432	p.K147fs	1.000	pirsf_Core_histone_macro-H2A	pfam_Macro_dom,pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,smart_Macro_dom,pirsf_Core_histone_macro-H2A,pfscan_Macro_dom,prints_Histone_H2A	-	no_errors	H2AFY2	HGNC	ENSG00000099284				107	0	0	65	17	20.7317
CHST3	0	genome.wustl.edu	37	10	73767317	73767317	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	73767317	73767317	G	-	DEL	CHST3	ENST00000373115	human	ensembl	74_37	+1	known	frame_shift_del	c.528	p.G178fs	0.047	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST3	HGNC	ENSG00000122863				57	0	0	26	5	16.129
USP54	0	genome.wustl.edu	37	10	75335385	75335385	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	75335385	75335385	C	-	DEL	USP54	ENST00000339859	human	ensembl	74_37	-1	known	frame_shift_del	c.32	p.G11fs	0.998	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348				126	0	0	106	13	10.9244
STAMBPL1	0	genome.wustl.edu	37	10	90682146	90682146	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	90682146	90682146	A	-	DEL	STAMBPL1	ENST00000371927	human	ensembl	74_37	+1	known	frame_shift_del	c.1207	p.K405fs	1.000	NULL	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	STAMBPL1	HGNC	ENSG00000138134				82	0	0	34	22	39.2857
LGI1	0	genome.wustl.edu	37	10	95552602	95552602	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	10	95552602	95552602	C	-	DEL	LGI1	ENST00000371418	human	ensembl	74_37	+1	known	frame_shift_del	c.606	p.P204fs	0.995	smart_Cys-rich_flank_reg_C	pfam_EPTP,pfam_Leu-rich_rpt,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI1	HGNC	ENSG00000108231				216	0	0	137	42	23.4637
MUC6	0	genome.wustl.edu	37	11	1017323	1017324	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	1017323	1017324	AT	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	frame_shift_del	c.5478_5477	p.Y1826fs	0.000:0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				1856	0	0	1490	81	5.15595
ATM	0	genome.wustl.edu	37	11	108159786	108159786	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	108159786	108159786	A	-	DEL	ATM	ENST00000278616	human	ensembl	74_37	+1	known	frame_shift_del	c.4192	p.T1399fs	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311				48	0	0	29	9	23.6842
DDX10	0	genome.wustl.edu	37	11	108544239	108544239	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	108544239	108544239	A	-	DEL	DDX10	ENST00000322536	human	ensembl	74_37	+1	known	frame_shift_del	c.232	p.T80fs	0.988	pfscan_RNA_helicase_DEAD_Q_motif	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX10	HGNC	ENSG00000178105				50	0	0	28	7	20
USP28	0	genome.wustl.edu	37	11	113700091	113700091	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	113700091	113700091	A	-	DEL	USP28	ENST00000544967	human	ensembl	74_37	-1	putative	frame_shift_del	c.11	p.L4fs	0.003	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP28	HGNC	ENSG00000048028				44	0	0	25	7	21.875
CEP164	0	genome.wustl.edu	37	11	117261750	117261751	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	117261750	117261751	AA	-	DEL	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	frame_shift_del	c.2102_2103	p.E701fs	1.000:0.986	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274				237	0	0	153	28	15.4696
CCDC15	0	genome.wustl.edu	37	11	124845049	124845049	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	124845049	124845049	A	-	DEL	CCDC15	ENST00000344762	human	ensembl	74_37	+1	known	frame_shift_del	c.574	p.K194fs	0.000	NULL	NULL	-	no_errors	CCDC15	HGNC	ENSG00000149548				36	0	0	27	5	15.625
BRSK2	0	genome.wustl.edu	37	11	1478186	1478187	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	1478186	1478187	-	C	INS	BRSK2	ENST00000308230	human	ensembl	74_37	+1	known	frame_shift_ins	c.2007_2008	p.P672fs	0.999:0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BRSK2	HGNC	ENSG00000174672				49	0	0	30	9	23.0769
KCNA4	0	genome.wustl.edu	37	11	30032940	30032940	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	30032940	30032940	C	-	DEL	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	frame_shift_del	c.1286	p.G429fs	1.000	pfam_Ion_trans_dom	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255				116	0	0	95	17	15.1786
TCP11L1	0	genome.wustl.edu	37	11	33087372	33087375	+	Splice_Site	DEL	ACAG	ACAG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	ACAG	ACAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	33087372	33087375	ACAG	-	DEL	TCP11L1	ENST00000527661	human	ensembl	74_37	+1	known	splice_site_del	c.973-4_973-1	e7-1	0.000:0.536:1.000:1.000	-	-	-	no_errors	TCP11L1	HGNC	ENSG00000176148				298	0	0	194	36	15.6522
DGKZ	0	genome.wustl.edu	37	11	46394213	46394213	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	46394213	46394213	G	-	DEL	DGKZ	ENST00000454345	human	ensembl	74_37	+1	known	frame_shift_del	c.1621	p.G542fs	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKZ	HGNC	ENSG00000149091				65	0	0	59	15	20.2703
ARFGAP2	0	genome.wustl.edu	37	11	47196853	47196853	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	47196853	47196853	A	-	DEL	ARFGAP2	ENST00000524782	human	ensembl	74_37	-1	known	frame_shift_del	c.276	p.R93fs	1.000	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ARFGAP2	HGNC	ENSG00000149182				168	1	0.591716	111	38	25.5034
ENSG00000254815	0	genome.wustl.edu	37	11	558069	558069	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	558069	558069	G	-	DEL	ENSG00000254815	ENST00000527620	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-496I9.1	Clone_based_vega_gene	ENSG00000254815				84	0	0	57	12	17.3913
RTN4RL2	0	genome.wustl.edu	37	11	57244232	57244233	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	57244232	57244233	-	G	INS	RTN4RL2	ENST00000335099	human	ensembl	74_37	+1	known	frame_shift_ins	c.1111_1112	p.Y374fs	0.998:1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	RTN4RL2	HGNC	ENSG00000186907				26	0	0	21	5	19.2308
EML3	0	genome.wustl.edu	37	11	62378802	62378802	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	62378802	62378802	G	-	DEL	EML3	ENST00000529309	human	ensembl	74_37	-1	known	frame_shift_del	c.209	p.P70fs	1.000	NULL	pfam_HELP,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML3	HGNC	ENSG00000149499				82	0	0	45	9	16.6667
ROM1	0	genome.wustl.edu	37	11	62381084	62381084	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	62381084	62381084	G	-	DEL	ROM1	ENST00000278833	human	ensembl	74_37	+1	known	frame_shift_del	c.331	p.L114fs	0.023	pfam_Tetraspanin/Peripherin,prints_Peripherin/rom-1	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Peripherin/rom-1	-	no_errors	ROM1	HGNC	ENSG00000149489				71	0	0	45	13	22.4138
RARRES3	0	genome.wustl.edu	37	11	63313709	63313709	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	63313709	63313709	A	-	DEL	RARRES3	ENST00000255688	human	ensembl	74_37	+1	known	frame_shift_del	c.476	p.A162fs	0.001	NULL	pfam_LRAT-like_dom	-	no_errors	RARRES3	HGNC	ENSG00000133321				315	2	0.630915	171	48	21.9178
CDC42EP2	0	genome.wustl.edu	37	11	65088586	65088586	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	65088586	65088586	C	-	DEL	CDC42EP2	ENST00000279249	human	ensembl	74_37	+1	known	frame_shift_del	c.217	p.P73fs	0.000	pfam_CRIB_dom,pirsf_Cdc42_effector_prot_2	pfam_CRIB_dom,smart_CRIB_dom,pirsf_Cdc42_effector_prot_2,pfscan_CRIB_dom	-	no_errors	CDC42EP2	HGNC	ENSG00000149798				113	0	0	82	20	19.6078
MALAT1	0	genome.wustl.edu	37	11	65269898	65269898	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	65269898	65269898	T	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				19	0	0	9	3	25
LTBP3	0	genome.wustl.edu	37	11	65314282	65314283	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	65314282	65314283	-	C	INS	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	frame_shift_ins	c.2217_2216	p.G740fs	1.000:1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056				90	0	0	46	15	24.5902
DNHD1	0	genome.wustl.edu	37	11	6590002	6590002	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	6590002	6590002	C	-	DEL	DNHD1	ENST00000254579	human	ensembl	74_37	+1	known	frame_shift_del	c.12769	p.T4259fs	0.122	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,superfamily_P-loop_NTPase,superfamily_t-SNARE	-	no_errors	DNHD1	HGNC	ENSG00000179532				37	0	0	25	9	26.4706
KLC2	0	genome.wustl.edu	37	11	66033664	66033664	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	66033664	66033664	C	-	DEL	KLC2	ENST00000316924	human	ensembl	74_37	+1	known	frame_shift_del	c.1703	p.Q570fs	0.984	NULL	pfam_Rabaptin_Rab5-bd_dom,pfam_TPR_1,smart_TPR_repeat,prints_Kinesin_light,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KLC2	HGNC	ENSG00000174996				91	0	0	65	22	25.2874
ENSG00000245156	0	genome.wustl.edu	37	11	66039391	66039391	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	66039391	66039391	G	-	DEL	ENSG00000245156	ENST00000501708	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	RP11-867G23.3	Clone_based_vega_gene	ENSG00000245156				60	0	0	38	14	26.9231
RSF1	0	genome.wustl.edu	37	11	77413116	77413116	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	77413116	77413116	T	-	DEL	RSF1	ENST00000308488	human	ensembl	74_37	-1	known	frame_shift_del	c.1158	p.K386fs	0.995	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	RSF1	HGNC	ENSG00000048649				66	0	0	58	19	24.6753
NDUFC2	0	genome.wustl.edu	37	11	77784147	77784148	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	77784147	77784148	AA	-	DEL	NDUFC2	ENST00000281031	human	ensembl	74_37	-1	known	frame_shift_del	c.207_206	p.F69fs	0.809:0.834	pfam_NADH-UbQ_OxRdtase_b14.5b_su,pirsf_NADH-UbQ_OxRdtase_b14.5b_su	pfam_NADH-UbQ_OxRdtase_b14.5b_su,pirsf_NADH-UbQ_OxRdtase_b14.5b_su	-	no_errors	NDUFC2	HGNC	ENSG00000151366				101	0	0	74	21	22.1053
SYTL2	0	genome.wustl.edu	37	11	85435356	85435356	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	85435356	85435356	G	-	DEL	SYTL2	ENST00000359152	human	ensembl	74_37	-1	known	frame_shift_del	c.3716	p.P1239fs	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYTL2	HGNC	ENSG00000137501				130	1	0.763359	103	16	13.4454
MRE11A	0	genome.wustl.edu	37	11	94189473	94189473	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	11	94189473	94189473	T	-	DEL	MRE11A	ENST00000323929	human	ensembl	74_37	-1	known	frame_shift_del	c.1532	p.N511fs	0.998	pirsf_DNA_repair_Mre11	pfam_Mre11_DNA-bd,pfam_PEstase_dom,pirsf_DNA_repair_Mre11,tigrfam_DNA_repair_Mre11	-	no_errors	MRE11A	HGNC	ENSG00000020922				45	0	0	33	7	17.5
HCFC2	0	genome.wustl.edu	37	12	104476535	104476535	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	104476535	104476535	A	-	DEL	HCFC2	ENST00000229330	human	ensembl	74_37	+1	known	frame_shift_del	c.919	p.N309fs	1.000	NULL	pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	HCFC2	HGNC	ENSG00000111727				99	0	0	84	14	14.2857
BTBD11	0	genome.wustl.edu	37	12	108051381	108051381	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	108051381	108051381	G	-	DEL	BTBD11	ENST00000280758	human	ensembl	74_37	+1	known	frame_shift_del	c.3201	p.Y1068fs	0.890	NULL	pfam_Ankyrin_rpt,pfam_BTB_POZ,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,superfamily_Histone-fold,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	BTBD11	HGNC	ENSG00000151136				114	0	0	93	10	9.70874
TCHP	0	genome.wustl.edu	37	12	110344435	110344435	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	110344435	110344435	A	-	DEL	TCHP	ENST00000312777	human	ensembl	74_37	+1	known	frame_shift_del	c.515	p.K174fs	1.000	NULL	NULL	-	no_errors	TCHP	HGNC	ENSG00000139437				82	0	0	68	6	8.10811
TAS2R14	0	genome.wustl.edu	37	12	11090836	11090836	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	11090836	11090836	T	-	DEL	TAS2R14	ENST00000381852	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TAS2R14	HGNC	ENSG00000212127				36	0	0	13	22	62.8571
ATXN2	0	genome.wustl.edu	37	12	111907939	111907939	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	111907939	111907939	C	-	DEL	ATXN2	ENST00000377617	human	ensembl	74_37	-1	known	frame_shift_del	c.3289	p.A1097fs	1.000	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2	HGNC	ENSG00000204842				131	0	0	83	35	29.661
NAA25	0	genome.wustl.edu	37	12	112485490	112485490	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	112485490	112485490	A	-	DEL	NAA25	ENST00000261745	human	ensembl	74_37	-1	known	frame_shift_del	c.1985	p.F662fs	1.000	NULL	pfam_N-acetylTrfase_B_cplx_non-cat,pfscan_TPR-contain_dom	-	no_errors	NAA25	HGNC	ENSG00000111300				217	1	0.458716	190	32	14.4144
HECTD4	0	genome.wustl.edu	37	12	112690349	112690349	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	112690349	112690349	G	-	DEL	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	frame_shift_del	c.2915	p.P972fs	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064				90	0	0	67	35	34.3137
PXN	0	genome.wustl.edu	37	12	120662036	120662036	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	120662036	120662036	G	-	DEL	PXN	ENST00000267257	human	ensembl	74_37	-1	known	frame_shift_del	c.158	p.P53fs	1.000	prints_Paxillin	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM,prints_Paxillin	-	no_errors	PXN	HGNC	ENSG00000089159				47	0	0	29	18	38.2979
KDM2B	0	genome.wustl.edu	37	12	122018740	122018740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	122018740	122018740	T	-	DEL	KDM2B	ENST00000377071	human	ensembl	74_37	-1	known	frame_shift_del	c.77	p.K26fs	0.013	NULL	pfam_Znf_CXXC,pfam_F-box_dom,pfam_JmjC_dom,superfamily_Znf_FYVE_PHD,smart_JmjC_dom,smart_Znf_PHD,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KDM2B	HGNC	ENSG00000089094				144	0	0	109	23	17.4242
VPS37B	0	genome.wustl.edu	37	12	123351891	123351892	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	123351891	123351892	-	G	INS	VPS37B	ENST00000267202	human	ensembl	74_37	-1	known	frame_shift_ins	c.630_629	p.P211fs	0.006:0.609	NULL	pfam_Mod_r	-	no_errors	VPS37B	HGNC	ENSG00000139722				40	0	0	31	11	26.1905
DNAH10	0	genome.wustl.edu	37	12	124274576	124274577	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	124274576	124274577	-	C	INS	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	frame_shift_ins	c.1540_1541	p.M516fs	0.915:0.913	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				244	0	0	205	45	18
DDX11	0	genome.wustl.edu	37	12	31254910	31254912	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	31254910	31254912	GAA	-	DEL	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	in_frame_del	c.2196_2198	p.K734in_frame_del	1.000:1.000:1.000	smart_ATP-dep_Helicase_C,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573				52	0	0	56	15	21.1268
KDM5A	0	genome.wustl.edu	37	12	432249	432249	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	432249	432249	T	-	DEL	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	frame_shift_del	c.2274	p.D759fs	1.000	pfam_Lys_sp_deMease_like_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614				95	0	0	32	16	33.3333
KMT2D	0	genome.wustl.edu	37	12	49427112	49427112	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	49427112	49427112	A	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.11376	p.Q3793fs	0.018	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				20	0	0	22	7	24.1379
KMT2D	0	genome.wustl.edu	37	12	49445149	49445149	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	49445149	49445149	G	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.2317	p.Q773fs	0.279	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				94	0	0	70	42	37.5
KRT73	0	genome.wustl.edu	37	12	53012262	53012262	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	53012262	53012262	C	-	DEL	KRT73	ENST00000305748	human	ensembl	74_37	-1	known	frame_shift_del	c.47	p.G16fs	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT73	HGNC	ENSG00000186049				130	1	0.763359	108	27	20
KRT2	0	genome.wustl.edu	37	12	53044122	53044124	+	Splice_Site	DEL	CTT	CTT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	53044122	53044124	CTT	-	DEL	KRT2	ENST00000309680	human	ensembl	74_37	-1	known	splice_site_del	c.800+3_800+1	e3-1	1.000:1.000:1.000	-	-	-	no_errors	KRT2	HGNC	ENSG00000172867				152	0	0	113	23	16.9118
OR6C76	0	genome.wustl.edu	37	12	55820959	55820961	+	In_Frame_Del	DEL	AAA	AAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	55820959	55820961	AAA	-	DEL	OR6C76	ENST00000328314	human	ensembl	74_37	+1	known	in_frame_del	c.922_924	p.K311in_frame_del	0.016:0.019:0.003	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C76	HGNC	ENSG00000185821				34	0	0	28	7	20
LRP1	0	genome.wustl.edu	37	12	57556223	57556223	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	57556223	57556223	C	-	DEL	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	frame_shift_del	c.2326	p.T778fs	0.102	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				200	0	0	130	27	17.1975
LRP1	0	genome.wustl.edu	37	12	57603939	57603940	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	57603939	57603940	-	C	INS	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	frame_shift_ins	c.12567_12568	p.D4192fs	0.037:0.113	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				125	1	0.793651	103	12	10.4348
MBD6	0	genome.wustl.edu	37	12	57921732	57921732	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	57921732	57921732	G	-	DEL	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_del	c.2338	p.G782fs	1.000	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				146	0	0	67	36	34.9515
CYP27B1	0	genome.wustl.edu	37	12	58157486	58157486	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	58157486	58157486	G	-	DEL	CYP27B1	ENST00000228606	human	ensembl	74_37	-1	known	frame_shift_del	c.1321	p.H441fs	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP27B1	HGNC	ENSG00000111012				193	0	0	163	33	16.8367
TMBIM4	0	genome.wustl.edu	37	12	66531937	66531937	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	66531937	66531937	A	-	DEL	TMBIM4	ENST00000358230	human	ensembl	74_37	-1	known	frame_shift_del	c.520	p.Y174fs	0.028	pfam_Bax_inhibitor_1-related	pfam_Bax_inhibitor_1-related	-	no_errors	TMBIM4	HGNC	ENSG00000155957				44	0	0	28	17	37.7778
CD4	0	genome.wustl.edu	37	12	6924042	6924043	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	6924042	6924043	-	G	INS	CD4	ENST00000011653	human	ensembl	74_37	+1	known	frame_shift_ins	c.491_492	p.K167fs	0.000:0.000	pfam_Ig_C2-set,smart_Ig_sub,smart_Ig_sub2	pfam_CD4-extracel,pfam_Ig_C2-set,pfam_Tcell_CD4_Cterm,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,pfam_NK_rcpt_2B4_Ig_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Ag_CD4	-	no_errors	CD4	HGNC	ENSG00000010610				115	0	0	117	19	13.9706
ZFC3H1	0	genome.wustl.edu	37	12	72038781	72038781	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	72038781	72038781	T	-	DEL	ZFC3H1	ENST00000378743	human	ensembl	74_37	-1	known	frame_shift_del	c.1155	p.K385fs	1.000	NULL	pfam_Putative_zinc-finger_domain,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	ZFC3H1	HGNC	ENSG00000133858				52	0	0	37	8	17.7778
NAV3	0	genome.wustl.edu	37	12	78512068	78512068	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	78512068	78512068	A	-	DEL	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	frame_shift_del	c.3031	p.T1012fs	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798				109	0	0	85	37	30.3279
SLC6A15	0	genome.wustl.edu	37	12	85285889	85285889	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	85285889	85285889	T	-	DEL	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	frame_shift_del	c.11	p.N4fs	1.000	NULL	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041				104	0	0	68	15	18.0723
VEZT	0	genome.wustl.edu	37	12	95650968	95650969	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	12	95650968	95650969	-	T	INS	VEZT	ENST00000436874	human	ensembl	74_37	+1	known	frame_shift_ins	c.211_212	p.S74fs	0.182:0.065	NULL	NULL	-	no_errors	VEZT	HGNC	ENSG00000028203				27	0	0	3	9	75
COL4A2	0	genome.wustl.edu	37	13	111114502	111114502	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	111114502	111114502	A	-	DEL	COL4A2	ENST00000360467	human	ensembl	74_37	+1	known	frame_shift_del	c.1638	p.G548fs	0.001	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A2	HGNC	ENSG00000134871				93	0	0	59	15	20.2703
TFDP1	0	genome.wustl.edu	37	13	114294635	114294635	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	114294635	114294635	T	-	DEL	TFDP1	ENST00000494812	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.126	-	-	-	no_errors	TFDP1	HGNC	ENSG00000198176				9	0	0	6	4	40
SACS	0	genome.wustl.edu	37	13	23914687	23914687	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	23914687	23914687	T	-	DEL	SACS	ENST00000382292	human	ensembl	74_37	-1	known	frame_shift_del	c.3328	p.I1110fs	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				315	0	0	191	37	16.2281
SLC46A3	0	genome.wustl.edu	37	13	29278265	29278265	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	29278265	29278265	A	-	DEL	SLC46A3	ENST00000475385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC46A3	HGNC	ENSG00000139508				46	0	0	25	8	24.2424
NBEA	0	genome.wustl.edu	37	13	36125104	36125104	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	36125104	36125104	A	-	DEL	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	frame_shift_del	c.6741	p.V2250fs	0.214	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				61	0	0	33	11	25
POSTN	0	genome.wustl.edu	37	13	38144790	38144790	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	38144790	38144790	T	-	DEL	POSTN	ENST00000379747	human	ensembl	74_37	-1	known	frame_shift_del	c.2196	p.K732fs	0.867	pirsf_TGFb-ind_bIGH3/osteoblast_fac2	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	POSTN	HGNC	ENSG00000133110				99	0	0	31	12	27.907
CCDC70	0	genome.wustl.edu	37	13	52439693	52439693	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	52439693	52439693	A	-	DEL	CCDC70	ENST00000242819	human	ensembl	74_37	+1	known	frame_shift_del	c.179	p.I62fs	0.829	NULL	NULL	-	no_errors	CCDC70	HGNC	ENSG00000123171				144	0	0	96	21	17.9487
CKAP2	0	genome.wustl.edu	37	13	53049034	53049034	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	53049034	53049034	A	-	DEL	CKAP2	ENST00000378037	human	ensembl	74_37	+1	known	frame_shift_del	c.1810	p.K606fs	0.999	NULL	NULL	-	no_errors	CKAP2	HGNC	ENSG00000136108				38	0	0	16	7	30.4348
SUGT1	0	genome.wustl.edu	37	13	53261959	53261959	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	53261959	53261959	A	-	DEL	SUGT1	ENST00000343788	human	ensembl	74_37	+1	known	frame_shift_del	c.1087	p.K364fs	1.000	pfam_SGS,pfscan_SGS	pfam_SGS,pfam_CS_dom,superfamily_HSP20-like_chaperone,smart_TPR_repeat,pfscan_CS_dom,pfscan_SGS,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SUGT1	HGNC	ENSG00000165416				44	0	0	21	7	25
OLFM4	0	genome.wustl.edu	37	13	53608482	53608484	+	Splice_Site	DEL	GTT	GTT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	GTT	GTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	53608482	53608484	GTT	-	DEL	OLFM4	ENST00000219022	human	ensembl	74_37	+1	known	splice_site_del	c.205-1_205-1	e2-1	0.970:0.002:0.000	-	-	-	no_errors	OLFM4	HGNC	ENSG00000102837				80	0	0	61	10	14.0845
LMO7	0	genome.wustl.edu	37	13	76393555	76393555	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	76393555	76393555	A	-	DEL	LMO7	ENST00000357063	human	ensembl	74_37	+1	known	frame_shift_del	c.2247	p.S751fs	0.996	NULL	pfam_CH-domain,pfam_PDZ,superfamily_CH-domain,superfamily_PDZ,smart_CH-domain,smart_PDZ,pfscan_CH-domain,pfscan_PDZ,prints_SM22_calponin	-	no_errors	LMO7	HGNC	ENSG00000136153				70	0	0	51	12	19.0476
GPR180	0	genome.wustl.edu	37	13	95254184	95254184	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	95254184	95254184	G	-	DEL	GPR180	ENST00000376958	human	ensembl	74_37	+1	known	frame_shift_del	c.3	p.L4fs	0.997	NULL	pfam_Intimal_thickness-rel_rcpt,pfam_TM_rcpt_euk	-	no_errors	GPR180	HGNC	ENSG00000152749				10	0	0	10	4	28.5714
UGGT2	0	genome.wustl.edu	37	13	96684171	96684172	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	96684171	96684172	CA	-	DEL	UGGT2	ENST00000376747	human	ensembl	74_37	-1	known	frame_shift_del	c.213_212	p.V71fs	0.468:0.996	NULL	pfam_UDP-g_GGtrans,pfam_Glyco_trans_8	-	no_errors	UGGT2	HGNC	ENSG00000102595				64	0	0	27	5	15.625
FARP1	0	genome.wustl.edu	37	13	99047712	99047712	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	13	99047712	99047712	C	-	DEL	FARP1	ENST00000376586	human	ensembl	74_37	+1	known	frame_shift_del	c.1396	p.P467fs	0.821	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM-adjacent,pfam_FERM_central,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP1	HGNC	ENSG00000152767				174	0	0	106	33	23.741
PPP2R5C	0	genome.wustl.edu	37	14	102378891	102378891	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	102378891	102378891	G	-	DEL	PPP2R5C	ENST00000556218	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PPP2R5C	HGNC	ENSG00000078304				22	0	0	10	3	23.0769
TECPR2	0	genome.wustl.edu	37	14	102901068	102901068	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	102901068	102901068	T	-	DEL	TECPR2	ENST00000359520	human	ensembl	74_37	+1	known	frame_shift_del	c.1914	p.C640fs	0.000	NULL	pfam_Beta-propeller_rpt_TECPR,superfamily_WD40_repeat_dom,superfamily_RCC1/BLIP-II,smart_WD40_repeat,smart_Beta-propeller_rpt_TECPR	-	no_errors	TECPR2	HGNC	ENSG00000196663				85	0	0	56	16	22.2222
OR4K5	0	genome.wustl.edu	37	14	20389294	20389294	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	20389294	20389294	T	-	DEL	OR4K5	ENST00000315915	human	ensembl	74_37	+1	known	frame_shift_del	c.529	p.C179fs	0.411	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K5	HGNC	ENSG00000176281				285	0	0	154	42	21.4286
CDH24	0	genome.wustl.edu	37	14	23517514	23517514	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	23517514	23517514	G	-	DEL	CDH24	ENST00000267383	human	ensembl	74_37	-1	known	frame_shift_del	c.2135	p.P712fs	0.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH24	HGNC	ENSG00000139880				152	0	0	102	37	26.6187
SDR39U1	0	genome.wustl.edu	37	14	24909373	24909375	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	24909373	24909375	CTT	-	DEL	SDR39U1	ENST00000399395	human	ensembl	74_37	-1	known	in_frame_del	c.798_796	p.K266in_frame_del	0.965:0.993:1.000	pfam_DUF1731_C,tigrfam_Sugar_nucleotide_Epase_put	pfam_DUF1731_C,pfam_Epimerase_deHydtase,tigrfam_Sugar_nucleotide_Epase_put	-	no_errors	SDR39U1	HGNC	ENSG00000100445				59	0	0	31	10	24.3902
NOVA1	0	genome.wustl.edu	37	14	26917308	26917309	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	26917308	26917309	-	T	INS	NOVA1	ENST00000539517	human	ensembl	74_37	-1	known	frame_shift_ins	c.1381_1380	p.G460fs	1.000:0.992	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	NOVA1	HGNC	ENSG00000139910				53	0	0	37	7	15.9091
MIA2	0	genome.wustl.edu	37	14	39716860	39716860	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	39716860	39716860	A	-	DEL	MIA2	ENST00000556784	human	ensembl	74_37	+1	putative	frame_shift_del	c.1079	p.D363fs	0.883	NULL	pfam_SH3_2,superfamily_SH3_domain	-	no_errors	MIA2	HGNC	ENSG00000150526				53	0	0	31	7	18.4211
YLPM1	0	genome.wustl.edu	37	14	75230717	75230717	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	75230717	75230717	C	-	DEL	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	frame_shift_del	c.525	p.P177fs	0.768	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596				59	0	0	44	12	21.4286
UNC79	0	genome.wustl.edu	37	14	94088050	94088050	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	94088050	94088050	A	-	DEL	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	frame_shift_del	c.4537	p.K1515fs	1.000	superfamily_ARM-type_fold	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				81	0	0	47	12	20.339
CLMN	0	genome.wustl.edu	37	14	95669614	95669614	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	14	95669614	95669614	G	-	DEL	CLMN	ENST00000298912	human	ensembl	74_37	-1	known	frame_shift_del	c.2072	p.P691fs	0.000	NULL	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	CLMN	HGNC	ENSG00000165959				94	0	0	71	20	21.978
DNM1P47	0	genome.wustl.edu	37	15	102312813	102312814	+	RNA	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	102312813	102312814	-	A	INS	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.899:0.858	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660				72	0	0	33	4	10.8108
SNORD116-26	0	genome.wustl.edu	37	15	25344663	25344663	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	25344663	25344663	A	-	DEL	SNORD116-26	ENST00000516006	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNORD116-26	HGNC	ENSG00000251815				91	0	0	70	19	21.3483
MAPKBP1	0	genome.wustl.edu	37	15	42110453	42110453	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	42110453	42110453	T	-	DEL	MAPKBP1	ENST00000456763	human	ensembl	74_37	+1	known	frame_shift_del	c.2060	p.F688fs	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802				117	0	0	74	18	19.5652
EIF3J	0	genome.wustl.edu	37	15	44843099	44843099	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	44843099	44843099	A	-	DEL	EIF3J	ENST00000261868	human	ensembl	74_37	+1	known	frame_shift_del	c.173	p.E61fs	1.000	pfam_eIF3j	pfam_eIF3j	-	no_errors	EIF3J	HGNC	ENSG00000104131				155	0	0	85	17	16.6667
SPG11	0	genome.wustl.edu	37	15	44905698	44905698	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	44905698	44905698	T	-	DEL	SPG11	ENST00000261866	human	ensembl	74_37	-1	known	frame_shift_del	c.3075	p.E1026fs	1.000	NULL	NULL	-	no_errors	SPG11	HGNC	ENSG00000104133				55	0	0	29	7	19.4444
B2M	0	genome.wustl.edu	37	15	45003781	45003784	+	Frame_Shift_Del	DEL	CTCT	CTCT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTCT	CTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	45003781	45003784	CTCT	-	DEL	B2M	ENST00000544417	human	ensembl	74_37	+1	known	frame_shift_del	c.37_40	p.S14fs	0.000:0.000:0.000:0.001	NULL	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	B2M	HGNC	ENSG00000166710				119	0	0	91	22	19.469
CEP152	0	genome.wustl.edu	37	15	49036443	49036443	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	49036443	49036443	T	-	DEL	CEP152	ENST00000380950	human	ensembl	74_37	-1	known	frame_shift_del	c.3829	p.I1277fs	1.000	NULL	NULL	-	no_errors	CEP152	HGNC	ENSG00000103995				43	0	0	32	8	20
FBXL22	0	genome.wustl.edu	37	15	63889654	63889656	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	63889654	63889656	CTC	-	DEL	FBXL22	ENST00000360587	human	ensembl	74_37	+1	known	in_frame_del	c.63_65	p.S22in_frame_del	1.000:1.000:1.000	superfamily_F-box_dom	superfamily_F-box_dom	-	no_errors	FBXL22	HGNC	ENSG00000197361				103	0	0	56	14	20
NOX5	0	genome.wustl.edu	37	15	69328220	69328222	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	69328220	69328222	CTC	-	DEL	NOX5	ENST00000388866	human	ensembl	74_37	+1	known	in_frame_del	c.1132_1134	p.L380in_frame_del	0.757:0.770:0.423	pfam_Fe3_Rdtase_TM_dom	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NOX5	HGNC	ENSG00000255346				327	0	0	191	43	18.3761
LRRC49	0	genome.wustl.edu	37	15	71272472	71272473	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	71272472	71272473	-	A	INS	LRRC49	ENST00000260382	human	ensembl	74_37	+1	known	frame_shift_ins	c.954_955	p.E320fs	1.000:1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC49	HGNC	ENSG00000137821				99	0	0	50	17	25.3731
IREB2	0	genome.wustl.edu	37	15	78762935	78762935	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	78762935	78762935	T	-	DEL	IREB2	ENST00000258886	human	ensembl	74_37	+1	known	frame_shift_del	c.691	p.F232fs	1.000	pfam_Acoase/IPM_deHydtase_lsu_aba,superfamily_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381				89	0	0	45	9	16.6667
ADAMTS7	0	genome.wustl.edu	37	15	79051796	79051796	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	79051796	79051796	G	-	DEL	ADAMTS7	ENST00000388820	human	ensembl	74_37	-1	known	frame_shift_del	c.5028	p.S1677fs	0.001	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378				47	0	0	27	7	20.5882
FAH	0	genome.wustl.edu	37	15	80478482	80478482	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	15	80478482	80478482	G	-	DEL	FAH	ENST00000261755	human	ensembl	74_37	+1	known	frame_shift_del	c.1191	p.D399fs	0.997	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel,tigrfam_Fumarylacetoacetase	pfam_Fumarylacetoacetase_C,pfam_Fumarylacetoacetase_N,superfamily_Fumarylacetoacetase_C-rel,superfamily_Fumarylacetoacetase_N,tigrfam_Fumarylacetoacetase	-	no_errors	FAH	HGNC	ENSG00000103876				95	0	0	67	10	12.987
TEKT5	0	genome.wustl.edu	37	16	10788457	10788457	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	10788457	10788457	G	-	DEL	TEKT5	ENST00000283025	human	ensembl	74_37	-1	known	frame_shift_del	c.274	p.H92fs	0.004	NULL	pfam_Tektin,prints_Tektin	-	no_errors	TEKT5	HGNC	ENSG00000153060				163	1	0.609756	94	21	18.2609
TVP23A	0	genome.wustl.edu	37	16	10867202	10867203	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	10867202	10867203	-	A	INS	TVP23A	ENST00000299866	human	ensembl	74_37	-1	known	frame_shift_ins	c.421_420	p.S140fs	1.000:1.000	pfam_DUF846_euk	pfam_DUF846_euk	-	no_errors	TVP23A	HGNC	ENSG00000166676				74	0	0	53	18	25.3521
KNOP1	0	genome.wustl.edu	37	16	19722724	19722724	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	19722724	19722724	T	-	DEL	KNOP1	ENST00000219837	human	ensembl	74_37	-1	known	frame_shift_del	c.957	p.G320fs	0.536	NULL	NULL	-	no_errors	KNOP1	HGNC	ENSG00000103550				192	1	0.518135	140	25	15.1515
TSC2	0	genome.wustl.edu	37	16	2098716	2098716	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	2098716	2098716	A	-	DEL	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	frame_shift_del	c.100	p.K34fs	0.436	superfamily_ARM-type_fold	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197				180	0	0	101	27	21.0938
MAZ	0	genome.wustl.edu	37	16	29821038	29821038	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	29821038	29821038	C	-	DEL	MAZ	ENST00000219782	human	ensembl	74_37	+1	known	frame_shift_del	c.1457	p.Q488fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	MAZ	HGNC	ENSG00000103495				9	0	0	11	8	42.1053
ENSG00000260304	0	genome.wustl.edu	37	16	31194048	31194049	+	RNA	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	31194048	31194049	-	T	INS	ENSG00000260304	ENST00000564743	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	RP11-388M20.6	Clone_based_vega_gene	ENSG00000260304				49	0	0	28	9	24.3243
LOC100134368	0	genome.wustl.edu	37	16	436712	436714	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	436712	436714	AAA	-	DEL	LOC100134368	ENST00000457760	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.000	-	-	-	no_errors	Z97634.3	Clone_based_vega_gene	ENSG00000236829				13	0	0	7	2	22.2222
MGRN1	0	genome.wustl.edu	37	16	4732864	4732866	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	4732864	4732866	GAG	-	DEL	MGRN1	ENST00000262370	human	ensembl	74_37	+1	known	in_frame_del	c.1399_1401	p.E468in_frame_del	0.999:1.000:0.997	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MGRN1	HGNC	ENSG00000102858				59	0	0	47	8	14.5455
MT4	0	genome.wustl.edu	37	16	56602768	56602769	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	56602768	56602769	-	C	INS	MT4	ENST00000219162	human	ensembl	74_37	+1	known	frame_shift_ins	c.113_114	p.G42fs	1.000:1.000	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	pfam_Metalthion_sfam_euk,superfamily_Metalthion_dom,prints_Metalthion_vert	-	no_errors	MT4	HGNC	ENSG00000102891				348	0	0	224	59	20.8481
LRRC36	0	genome.wustl.edu	37	16	67418824	67418824	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	67418824	67418824	A	-	DEL	LRRC36	ENST00000329956	human	ensembl	74_37	+1	known	frame_shift_del	c.2097	p.G701fs	0.811	NULL	NULL	-	no_errors	LRRC36	HGNC	ENSG00000159708				104	0	0	70	11	13.5802
RLTPR	0	genome.wustl.edu	37	16	67682131	67682131	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	67682131	67682131	C	-	DEL	RLTPR	ENST00000334583	human	ensembl	74_37	+1	known	frame_shift_del	c.1248	p.P418fs	0.002	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RLTPR	HGNC	ENSG00000159753				33	0	0	20	6	23.0769
RAB40C	0	genome.wustl.edu	37	16	677580	677580	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	677580	677580	C	-	DEL	RAB40C	ENST00000248139	human	ensembl	74_37	+1	known	frame_shift_del	c.804	p.Q271fs	1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_SOCS_C,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,smart_SOCS_C,pfscan_SOCS_C,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB40C	HGNC	ENSG00000197562				131	0	0	75	25	25
WDR90	0	genome.wustl.edu	37	16	709105	709106	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	709105	709106	-	C	INS	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	frame_shift_ins	c.3031_3032	p.A1014fs	0.000:0.000	NULL	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996				178	0	0	117	20	14.5985
ZFHX3	0	genome.wustl.edu	37	16	72828435	72828435	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	72828435	72828435	A	-	DEL	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	frame_shift_del	c.8146	p.C2716fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				135	0	0	94	13	12.1495
ZFHX3	0	genome.wustl.edu	37	16	72991758	72991758	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	72991758	72991758	C	-	DEL	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	frame_shift_del	c.2287	p.E763fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				126	1	0.787402	72	21	22.5806
ZC3H18	0	genome.wustl.edu	37	16	88694458	88694459	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	16	88694458	88694459	-	C	INS	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	frame_shift_ins	c.2400_2401	p.G802fs	0.106:0.269	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545				236	0	0	160	46	22.3301
ABR	0	genome.wustl.edu	37	17	1028559	1028559	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	1028559	1028559	C	-	DEL	ABR	ENST00000302538	human	ensembl	74_37	-1	known	frame_shift_del	c.205	p.D69fs	1.000	superfamily_DH-domain	pfam_RhoGAP_dom,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	ABR	HGNC	ENSG00000159842				176	0	0	112	31	21.6783
MYOCD	0	genome.wustl.edu	37	17	12626277	12626278	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	12626277	12626278	-	A	INS	MYOCD	ENST00000425538	human	ensembl	74_37	+1	known	frame_shift_ins	c.367_368	p.N125fs	1.000:1.000	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MYOCD	HGNC	ENSG00000141052				229	0	0	128	41	24.2604
WDR81	0	genome.wustl.edu	37	17	1631634	1631634	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	1631634	1631634	G	-	DEL	WDR81	ENST00000409644	human	ensembl	74_37	+1	known	frame_shift_del	c.3381	p.G1129fs	0.708	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716				193	1	0.515464	132	39	22.807
SHMT1	0	genome.wustl.edu	37	17	18251660	18251660	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	18251660	18251660	C	-	DEL	SHMT1	ENST00000316694	human	ensembl	74_37	-1	known	frame_shift_del	c.337	p.V113fs	1.000	pfam_Ser_HO-MeTrfase,superfamily_PyrdxlP-dep_Trfase,pirsf_Ser_HO-MeTrfase	pfam_Ser_HO-MeTrfase,pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,pirsf_Ser_HO-MeTrfase	-	no_errors	SHMT1	HGNC	ENSG00000176974				45	0	0	24	6	20
EPN2	0	genome.wustl.edu	37	17	19232950	19232950	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	19232950	19232950	A	-	DEL	EPN2	ENST00000314728	human	ensembl	74_37	+1	known	frame_shift_del	c.1401	p.T470fs	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN2	HGNC	ENSG00000072134				108	0	0	54	18	25
ULK2	0	genome.wustl.edu	37	17	19729453	19729453	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	19729453	19729453	T	-	DEL	ULK2	ENST00000361658	human	ensembl	74_37	-1	known	frame_shift_del	c.834	p.K278fs	1.000	superfamily_Kinase-like_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser/Thr_kinase_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK2	HGNC	ENSG00000083290				95	0	0	45	16	26.2295
SEZ6	0	genome.wustl.edu	37	17	27308582	27308582	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	27308582	27308582	G	-	DEL	SEZ6	ENST00000317338	human	ensembl	74_37	-1	known	frame_shift_del	c.531	p.S178fs	0.196	NULL	pfam_Sushi_SCR_CCP,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_CUB_dom,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6	HGNC	ENSG00000063015				31	0	0	28	7	20
LIG3	0	genome.wustl.edu	37	17	33310486	33310486	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	33310486	33310486	A	-	DEL	LIG3	ENST00000378526	human	ensembl	74_37	+1	known	frame_shift_del	c.462	p.I157fs	1.000	pfam_Znf_PARP,pfscan_Znf_PARP	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_Znf_PARP,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG3	HGNC	ENSG00000005156				48	0	0	38	7	15.5556
MRM1	0	genome.wustl.edu	37	17	34964728	34964728	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	34964728	34964728	G	-	DEL	MRM1	ENST00000250156	human	ensembl	74_37	+1	known	frame_shift_del	c.939	p.E315fs	0.000	NULL	pfam_SpoU_MeTrfase,pfam_SpoU_subst-bd,smart_SpoU_subst-bd,tigrfam_rRNA_MeTrfase_TrmH	-	no_errors	MRM1	HGNC	ENSG00000129282				237	0	0	139	37	21.0227
KRT31	0	genome.wustl.edu	37	17	39553720	39553720	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	39553720	39553720	G	-	DEL	KRT31	ENST00000251645	human	ensembl	74_37	-1	known	frame_shift_del	c.72	p.S25fs	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT31	HGNC	ENSG00000094796				101	1	0.980392	81	13	13.8298
FKBP10	0	genome.wustl.edu	37	17	39975559	39975559	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	39975559	39975559	C	-	DEL	FKBP10	ENST00000321562	human	ensembl	74_37	+1	known	frame_shift_del	c.825	p.G278fs	0.062	NULL	pfam_PPIase_FKBP_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP10	HGNC	ENSG00000141756				173	0	0	107	32	23.0216
ANKFY1	0	genome.wustl.edu	37	17	4085525	4085525	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	4085525	4085525	G	-	DEL	ANKFY1	ENST00000570535	human	ensembl	74_37	-1	known	frame_shift_del	c.2198	p.P733fs	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Znf_FYVE,pfam_BTB_POZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_BTB/POZ_fold,superfamily_Znf_FYVE_PHD,smart_BTB/POZ-like,smart_Ankyrin_rpt,smart_Znf_FYVE,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Znf_FYVE-rel,prints_Ankyrin_rpt	-	no_errors	ANKFY1	HGNC	ENSG00000185722				226	0	0	137	38	21.7143
ETV4	0	genome.wustl.edu	37	17	41610701	41610701	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	41610701	41610701	G	-	DEL	ETV4	ENST00000319349	human	ensembl	74_37	-1	known	frame_shift_del	c.399	p.R134fs	1.000	pfam_ETS_PEA3_N	pfam_ETS_PEA3_N,pfam_Ets_dom,smart_Ets_dom,prints_Ets_dom,pfscan_Ets_dom	-	no_errors	ETV4	HGNC	ENSG00000175832				65	0	0	43	9	17.3077
SPNS3	0	genome.wustl.edu	37	17	4389805	4389805	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	4389805	4389805	G	-	DEL	SPNS3	ENST00000355530	human	ensembl	74_37	+1	known	frame_shift_del	c.1377	p.G461fs	0.811	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SPNS3	HGNC	ENSG00000182557				102	1	0.970874	88	16	15.3846
XYLT2	0	genome.wustl.edu	37	17	48433967	48433967	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	48433967	48433967	C	-	DEL	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	frame_shift_del	c.1578	p.G529fs	1.000	pfam_XylT	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				135	1	0.735294	106	24	18.4615
SPAG9	0	genome.wustl.edu	37	17	49077041	49077041	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	49077041	49077041	T	-	DEL	SPAG9	ENST00000262013	human	ensembl	74_37	-1	known	frame_shift_del	c.1645	p.R549fs	1.000	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	SPAG9	HGNC	ENSG00000008294				48	0	0	17	13	43.3333
COIL	0	genome.wustl.edu	37	17	55028118	55028118	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	55028118	55028118	T	-	DEL	COIL	ENST00000240316	human	ensembl	74_37	-1	known	frame_shift_del	c.485	p.N162fs	0.013	NULL	NULL	-	no_errors	COIL	HGNC	ENSG00000121058				121	0	0	63	21	25
PRR11	0	genome.wustl.edu	37	17	57247171	57247171	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	57247171	57247171	A	-	DEL	PRR11	ENST00000262293	human	ensembl	74_37	+1	known	frame_shift_del	c.58	p.E23fs	0.749	NULL	NULL	-	no_errors	PRR11	HGNC	ENSG00000068489				74	0	0	44	12	21.4286
SDK2	0	genome.wustl.edu	37	17	71394282	71394282	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	71394282	71394282	G	-	DEL	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	frame_shift_del	c.3246	p.S1083fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188				91	0	0	53	14	20.8955
FXR2	0	genome.wustl.edu	37	17	7495036	7495036	+	RNA	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	17	7495036	7495036	C	-	DEL	FXR2	ENST00000573057	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	FXR2	HGNC	ENSG00000129245				12	0	0	10	6	37.5
ENSG00000264714	0	genome.wustl.edu	37	18	10726633	10726634	+	RNA	DEL	GC	GC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	10726633	10726634	GC	-	DEL	ENSG00000264714	ENST00000581724	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	RP11-21G15.1	Clone_based_vega_gene	ENSG00000264714				12	0	0	8	2	20
CTAGE1	0	genome.wustl.edu	37	18	19995706	19995706	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	19995706	19995706	G	-	DEL	CTAGE1	ENST00000391403	human	ensembl	74_37	-1	known	frame_shift_del	c.2069	p.P690fs	0.300	NULL	NULL	-	no_errors	CTAGE1	HGNC	ENSG00000212710				174	0	0	96	27	21.9512
ENSG00000263606	0	genome.wustl.edu	37	18	2946534	2946534	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	2946534	2946534	T	-	DEL	ENSG00000263606	ENST00000581139	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.978	-	-	-	no_errors	RP11-737O24.3	Clone_based_vega_gene	ENSG00000263606				24	0	0	22	6	21.4286
ENSG00000252258	0	genome.wustl.edu	37	18	3025533	3025533	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	3025533	3025533	A	-	DEL	ENSG00000252258	ENST00000516449	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORA70	RFAM	ENSG00000252258				32	0	0	14	6	30
NOL4	0	genome.wustl.edu	37	18	31803157	31803157	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	31803157	31803157	C	-	DEL	NOL4	ENST00000261592	human	ensembl	74_37	-1	known	frame_shift_del	c.61	p.D21fs	1.000	NULL	NULL	-	no_errors	NOL4	HGNC	ENSG00000101746				116	1	0.854701	89	21	19.0909
SYT4	0	genome.wustl.edu	37	18	40857246	40857246	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	40857246	40857246	T	-	DEL	SYT4	ENST00000255224	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT4	HGNC	ENSG00000132872				95	0	0	64	13	16.8831
CTIF	0	genome.wustl.edu	37	18	46284389	46284389	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	46284389	46284389	G	-	DEL	CTIF	ENST00000382998	human	ensembl	74_37	+1	known	frame_shift_del	c.684	p.G230fs	1.000	NULL	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	CTIF	HGNC	ENSG00000134030				190	0	0	131	50	27.6243
DCC	0	genome.wustl.edu	37	18	50976892	50976892	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	50976892	50976892	C	-	DEL	DCC	ENST00000442544	human	ensembl	74_37	+1	known	frame_shift_del	c.3252	p.P1086fs	1.000	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323				103	0	0	54	11	16.9231
ENSG00000267040	0	genome.wustl.edu	37	18	55335787	55335788	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	55335787	55335788	AA	-	DEL	ENSG00000267040	ENST00000592201	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-35G9.3	Clone_based_vega_gene	ENSG00000267040				26	0	0	17	2	10.5263
LMAN1	0	genome.wustl.edu	37	18	57013194	57013194	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	57013194	57013194	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	frame_shift_del	c.912	p.E305fs	0.898	superfamily_HMG_box_dom	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf,superfamily_HMG_box_dom	-	no_errors	LMAN1	HGNC	ENSG00000074695				121	1	0.819672	87	21	19.4444
LMAN1	0	genome.wustl.edu	37	18	57013285	57013285	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	57013285	57013285	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	splice_site_del	c.823-2	e8-2	1.000	-	-	-	no_errors	LMAN1	HGNC	ENSG00000074695				114	0	0	78	10	11.3636
TMEM200C	0	genome.wustl.edu	37	18	5891698	5891698	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	5891698	5891698	C	-	DEL	TMEM200C	ENST00000383490	human	ensembl	74_37	-1	known	frame_shift_del	c.365	p.G122fs	0.000	pfam_DUF2371_TMEM200	pfam_DUF2371_TMEM200	-	no_errors	TMEM200C	HGNC	ENSG00000206432				116	1	0.854701	87	23	20.9091
CCDC102B	0	genome.wustl.edu	37	18	66504103	66504103	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	66504103	66504103	C	-	DEL	CCDC102B	ENST00000319445	human	ensembl	74_37	+1	known	frame_shift_del	c.103	p.R37fs	0.000	NULL	NULL	-	no_errors	CCDC102B	HGNC	ENSG00000150636				141	0	0	82	21	20.3883
CNDP2	0	genome.wustl.edu	37	18	72168668	72168668	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	72168668	72168668	G	-	DEL	CNDP2	ENST00000324262	human	ensembl	74_37	+1	known	frame_shift_del	c.165	p.G57fs	1.000	pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP2	HGNC	ENSG00000133313				139	0	0	88	21	19.2661
ADNP2	0	genome.wustl.edu	37	18	77896563	77896564	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	18	77896563	77896564	-	T	INS	ADNP2	ENST00000262198	human	ensembl	74_37	+1	known	frame_shift_ins	c.3267_3268	p.G1091fs	1.000:1.000	superfamily_Homeodomain-like,smart_Homeobox_dom	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ADNP2	HGNC	ENSG00000101544				91	0	0	49	7	12.5
ENSG00000267607	0	genome.wustl.edu	37	19	10398198	10398198	+	RNA	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	10398198	10398198	C	-	DEL	ENSG00000267607	ENST00000589379	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTD-2369P2.8	Clone_based_vega_gene	ENSG00000267607				68	0	0	51	15	22.7273
NACC1	0	genome.wustl.edu	37	19	13246769	13246769	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	13246769	13246769	G	-	DEL	NACC1	ENST00000292431	human	ensembl	74_37	+1	known	frame_shift_del	c.748	p.G251fs	0.432	NULL	pfam_BTB_POZ,pfam_BEN_domain,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	NACC1	HGNC	ENSG00000160877				25	0	0	21	3	12.5
OR10H3	0	genome.wustl.edu	37	19	15852693	15852693	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	15852693	15852693	T	-	DEL	OR10H3	ENST00000305892	human	ensembl	74_37	+1	known	frame_shift_del	c.491	p.H166fs	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H3	HGNC	ENSG00000171936				124	0	0	79	19	19.3878
IZUMO4	0	genome.wustl.edu	37	19	2097034	2097036	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	2097034	2097036	CTT	-	DEL	IZUMO4	ENST00000395301	human	ensembl	74_37	+1	known	in_frame_del	c.90_92	p.F31in_frame_del	0.999:1.000:1.000	NULL	NULL	-	no_errors	IZUMO4	HGNC	ENSG00000099840				123	0	0	70	16	18.6047
ZNF91	0	genome.wustl.edu	37	19	23544256	23544257	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	23544256	23544257	TA	-	DEL	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	frame_shift_del	c.1525_1524	p.H508fs	0.132:0.463	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232				71	0	0	36	15	29.4118
C19orf40	0	genome.wustl.edu	37	19	33464997	33464997	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	33464997	33464997	A	-	DEL	C19orf40	ENST00000588258	human	ensembl	74_37	+1	known	frame_shift_del	c.275	p.T94fs	1.000	NULL	superfamily_RuvA_2-like	-	no_errors	C19orf40	HGNC	ENSG00000131944				63	0	0	43	11	20.3704
KMT2B	0	genome.wustl.edu	37	19	36210764	36210764	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	36210764	36210764	C	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.515	p.P174fs	0.976	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				146	0	0	112	29	20.5674
SELV	0	genome.wustl.edu	37	19	40009541	40009543	+	Splice_Site	DEL	AGG	AGG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	40009541	40009543	AGG	-	DEL	SELV	ENST00000423711	human	ensembl	74_37	+1	known	splice_site_del	c.889-2_889-1	e5-1	0.991:0.998:0.998	-	-	-	no_errors	SELV	Uniprot_gn	ENSG00000186838				179	0	0	125	30	19.3548
CEACAM5	0	genome.wustl.edu	37	19	42224975	42224976	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	42224975	42224976	AC	-	DEL	CEACAM5	ENST00000221992	human	ensembl	74_37	+1	known	frame_shift_del	c.1905_1906	p.Q638fs	0.121:0.204	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM5	HGNC	ENSG00000105388				157	0	0	128	30	18.9873
ZNF112	0	genome.wustl.edu	37	19	44833358	44833359	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	44833358	44833359	CT	-	DEL	ZNF112	ENST00000536500	human	ensembl	74_37	-1	known	frame_shift_del	c.1021_1020	p.R340fs	0.000:0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF112	HGNC	ENSG00000062370				67	0	0	33	9	21.4286
PPM1N	0	genome.wustl.edu	37	19	46003737	46003737	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	46003737	46003737	C	-	DEL	PPM1N	ENST00000451287	human	ensembl	74_37	+1	known	frame_shift_del	c.1081	p.S363fs	0.999	pfam_PP2C_C,superfamily_PP2C_C	pfam_PP2C-like_dom,pfam_PP2C_C,superfamily_PP2C-like_dom,superfamily_PP2C_C,smart_PP2C-like_dom	-	no_errors	PPM1N	HGNC	ENSG00000213889				28	0	0	19	4	17.3913
FAM83E	0	genome.wustl.edu	37	19	49113957	49113957	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	49113957	49113957	C	-	DEL	FAM83E	ENST00000263266	human	ensembl	74_37	-1	known	frame_shift_del	c.613	p.V205fs	0.726	pfam_DUF1669	pfam_DUF1669,superfamily_Acyl_CoA_acyltransferase	-	no_errors	FAM83E	HGNC	ENSG00000105523				11	0	0	4	3	42.8571
FGF21	0	genome.wustl.edu	37	19	49259700	49259700	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	49259700	49259700	G	-	DEL	FGF21	ENST00000222157	human	ensembl	74_37	+1	known	frame_shift_del	c.207	p.G71fs	0.031	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF21	HGNC	ENSG00000105550				65	0	0	35	7	16.6667
BAX	0	genome.wustl.edu	37	19	49458971	49458971	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	49458971	49458971	G	-	DEL	BAX	ENST00000293288	human	ensembl	74_37	+1	known	frame_shift_del	c.114	p.E41fs	0.588	NULL	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BAX	HGNC	ENSG00000087088				121	0	0	58	42	42
FCGRT	0	genome.wustl.edu	37	19	50017380	50017380	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	50017380	50017380	G	-	DEL	FCGRT	ENST00000221466	human	ensembl	74_37	+1	known	frame_shift_del	c.315	p.G107fs	0.000	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	FCGRT	HGNC	ENSG00000104870				55	0	0	34	12	26.087
SCAF1	0	genome.wustl.edu	37	19	50158042	50158042	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	50158042	50158042	C	-	DEL	SCAF1	ENST00000360565	human	ensembl	74_37	+1	known	frame_shift_del	c.3533	p.T1181fs	0.934	NULL	NULL	-	no_errors	SCAF1	HGNC	ENSG00000126461				78	0	0	51	7	12.069
NUP62	0	genome.wustl.edu	37	19	50412225	50412230	+	Splice_Site	DEL	GGTGGC	GGTGGC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	GGTGGC	GGTGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	50412225	50412230	GGTGGC	-	DEL	NUP62	ENST00000597723	human	ensembl	74_37	-1	putative	splice_site_del	c.834+1_834+1	e1+1	0.004:0.007:0.000:0.000:0.000:0.000	-	-	-	no_errors	NUP62	HGNC	ENSG00000213024				76	0	0	59	15	20.2703
EMC10	0	genome.wustl.edu	37	19	50985132	50985132	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	50985132	50985132	G	-	DEL	EMC10	ENST00000376918	human	ensembl	74_37	+1	known	frame_shift_del	c.693	p.A234fs	1.000	NULL	NULL	-	no_errors	EMC10	HGNC	ENSG00000161671				15	0	0	10	7	41.1765
SHANK1	0	genome.wustl.edu	37	19	51192559	51192559	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	51192559	51192559	G	-	DEL	SHANK1	ENST00000391813	human	ensembl	74_37	-1	known	frame_shift_del	c.103	p.H35fs	0.020	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	SHANK1	HGNC	ENSG00000161681				67	0	0	68	13	16.0494
SUV420H2	0	genome.wustl.edu	37	19	55853589	55853590	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	55853589	55853590	-	C	INS	SUV420H2	ENST00000255613	human	ensembl	74_37	+1	known	frame_shift_ins	c.117_118	p.L41fs	0.990:1.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SUV420H2	HGNC	ENSG00000133247				38	0	0	26	6	18.75
PRR22	0	genome.wustl.edu	37	19	5783841	5783841	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	5783841	5783841	C	-	DEL	PRR22	ENST00000419421	human	ensembl	74_37	-1	known	frame_shift_del	c.417	p.Q141fs	0.065	NULL	NULL	-	no_errors	PRR22	HGNC	ENSG00000212123				10	0	0	18	7	28
CAMSAP3	0	genome.wustl.edu	37	19	7676687	7676687	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	7676687	7676687	C	-	DEL	CAMSAP3	ENST00000446248	human	ensembl	74_37	+1	known	frame_shift_del	c.1389	p.P465fs	0.097	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826				27	0	0	29	7	19.4444
CAMSAP3	0	genome.wustl.edu	37	19	7676727	7676727	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	7676727	7676727	C	-	DEL	CAMSAP3	ENST00000446248	human	ensembl	74_37	+1	known	frame_shift_del	c.1429	p.P478fs	0.001	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826				38	0	0	31	10	24.3902
ELAVL1	0	genome.wustl.edu	37	19	8028414	8028414	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	19	8028414	8028414	C	-	DEL	ELAVL1	ENST00000351593	human	ensembl	74_37	-1	known	frame_shift_del	c.1015	p.D339fs	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL1	HGNC	ENSG00000066044				153	0	0	100	22	18.0328
SLC9A2	0	genome.wustl.edu	37	2	103324746	103324746	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	103324746	103324746	C	-	DEL	SLC9A2	ENST00000233969	human	ensembl	74_37	+1	known	frame_shift_del	c.2237	p.P748fs	0.000	prints_Na/H_exchanger_2	pfam_Cation/H_exchanger,prints_Na/H_exchanger_2,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A2	HGNC	ENSG00000115616				312	0	0	166	52	23.8532
PSD4	0	genome.wustl.edu	37	2	113942944	113942945	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	113942944	113942945	CT	-	DEL	PSD4	ENST00000245796	human	ensembl	74_37	+1	known	frame_shift_del	c.1176_1177	p.L394fs	0.000:0.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD4	HGNC	ENSG00000125637				224	0	0	158	30	15.9574
SLC35F5	0	genome.wustl.edu	37	2	114500277	114500278	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	114500277	114500278	AA	-	DEL	SLC35F5	ENST00000245680	human	ensembl	74_37	-1	known	frame_shift_del	c.742_741	p.F247fs	1.000:1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35F5	HGNC	ENSG00000115084				123	0	0	65	19	22.619
EPB41L5	0	genome.wustl.edu	37	2	120836150	120836150	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	120836150	120836150	T	-	DEL	EPB41L5	ENST00000263713	human	ensembl	74_37	+1	known	frame_shift_del	c.796	p.W268fs	1.000	pfam_FERM_PH-like_C,pfscan_FERM_domain	pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L5	HGNC	ENSG00000115109				50	0	0	23	9	28.125
ENSG00000231731	0	genome.wustl.edu	37	2	128263364	128263366	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	128263364	128263366	AAA	-	DEL	ENSG00000231731	ENST00000599001	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.233:0.319:0.309	-	-	-	no_errors	AC010976.2	Clone_based_vega_gene	ENSG00000231731				54	0	0	31	8	20.5128
UGGT1	0	genome.wustl.edu	37	2	128867246	128867247	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	128867246	128867247	-	T	INS	UGGT1	ENST00000259253	human	ensembl	74_37	+1	known	frame_shift_ins	c.447_448	p.S151fs	0.034:0.997	NULL	pfam_UDP-g_GGtrans	-	no_errors	UGGT1	HGNC	ENSG00000136731				119	0	0	63	7	10
CCDC74B	0	genome.wustl.edu	37	2	130902531	130902531	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	130902531	130902531	G	-	DEL	CCDC74B	ENST00000310463	human	ensembl	74_37	-1	known	frame_shift_del	c.39	p.S14fs	0.161	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076				42	0	0	45	7	13.4615
AMER3	0	genome.wustl.edu	37	2	131521308	131521308	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	131521308	131521308	G	-	DEL	AMER3	ENST00000321420	human	ensembl	74_37	+1	known	frame_shift_del	c.1663	p.A557fs	0.000	NULL	pfam_Uncharacterised_FAM123	-	no_errors	AMER3	HGNC	ENSG00000178171				46	0	0	22	9	29.0323
LRP1B	0	genome.wustl.edu	37	2	141528516	141528516	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	141528516	141528516	C	-	DEL	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	frame_shift_del	c.5560	p.E1854fs	1.000	smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				127	0	0	70	19	21.3483
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				126	1	0.787402	41	34	45.3333
SCN3A	0	genome.wustl.edu	37	2	165987929	165987930	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	165987929	165987930	-	A	INS	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	splice_site_ins	c.2392-3_2392-2	e14-2	1.000:0.008	-	-	-	no_errors	SCN3A	HGNC	ENSG00000153253				87	0	0	55	11	16.6667
CSRNP3	0	genome.wustl.edu	37	2	166514383	166514384	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	166514383	166514384	-	G	INS	CSRNP3	ENST00000314499	human	ensembl	74_37	+1	known	frame_shift_ins	c.261_262	p.S89fs	0.999:1.000	NULL	prints_Cys/Ser-rich_nuc_prot	-	no_errors	CSRNP3	HGNC	ENSG00000178662				102	0	0	56	6	9.67742
FASTKD1	0	genome.wustl.edu	37	2	170428529	170428530	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	170428529	170428530	-	T	INS	FASTKD1	ENST00000453153	human	ensembl	74_37	-1	known	frame_shift_ins	c.11_10	p.T4fs	0.000:0.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD1	HGNC	ENSG00000138399				34	0	0	18	7	28
TTN	0	genome.wustl.edu	37	2	179647781	179647781	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	179647781	179647781	T	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.2852	p.N951fs	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				49	0	0	40	9	18.3673
SLC39A10	0	genome.wustl.edu	37	2	196544941	196544942	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	196544941	196544942	-	A	INS	SLC39A10	ENST00000359634	human	ensembl	74_37	+1	known	frame_shift_ins	c.175_176	p.Y62fs	1.000:1.000	NULL	pfam_ZIP	-	no_errors	SLC39A10	HGNC	ENSG00000196950				63	0	0	34	8	19.0476
GTF3C3	0	genome.wustl.edu	37	2	197657762	197657764	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	197657762	197657764	TCC	-	DEL	GTF3C3	ENST00000263956	human	ensembl	74_37	-1	known	in_frame_del	c.329_327	p.E111in_frame_del	0.984:0.986:0.955	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GTF3C3	HGNC	ENSG00000119041				44	0	0	27	3	10
ANKRD44	0	genome.wustl.edu	37	2	197943382	197943383	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	197943382	197943383	-	TG	INS	ANKRD44	ENST00000409153	human	ensembl	74_37	-1	known	frame_shift_ins	c.1695_1694	p.T566fs	0.000:0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD44	HGNC	ENSG00000065413				17	0	0	9	4	30.7692
SGOL2	0	genome.wustl.edu	37	2	201436992	201436992	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	201436992	201436992	A	-	DEL	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	frame_shift_del	c.1923	p.G644fs	0.002	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535				143	0	0	77	26	25.2427
NOP58	0	genome.wustl.edu	37	2	203168132	203168133	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	203168132	203168133	-	A	INS	NOP58	ENST00000264279	human	ensembl	74_37	+1	known	frame_shift_ins	c.1563_1564	p.R524fs	1.000:1.000	NULL	pfam_Nop_dom,pfam_NOSIC,pfam_NOP5_N,smart_NOSIC	-	no_errors	NOP58	HGNC	ENSG00000055044				48	0	0	28	6	17.6471
BMPR2	0	genome.wustl.edu	37	2	203383617	203383617	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	203383617	203383617	T	-	DEL	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	frame_shift_del	c.694	p.S233fs	0.996	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217				91	0	0	63	20	24.0964
RAPH1	0	genome.wustl.edu	37	2	204305619	204305619	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	204305619	204305619	G	-	DEL	RAPH1	ENST00000374493	human	ensembl	74_37	-1	known	frame_shift_del	c.2450	p.P817fs	0.409	NULL	pfam_Ras-assoc,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,prints_Paxillin	-	no_errors	RAPH1	HGNC	ENSG00000173166				140	0	0	118	21	15.1079
PUM2	0	genome.wustl.edu	37	2	20453761	20453761	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	20453761	20453761	T	-	DEL	PUM2	ENST00000361078	human	ensembl	74_37	-1	known	frame_shift_del	c.2891	p.K964fs	1.000	pfam_Pumilio_RNA-bd_rpt,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	pfam_Pumilio_RNA-bd_rpt,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	PUM2	HGNC	ENSG00000055917				84	0	0	65	14	17.7215
PARD3B	0	genome.wustl.edu	37	2	206166298	206166298	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	206166298	206166298	A	-	DEL	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	frame_shift_del	c.2503	p.T837fs	0.996	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117				88	0	0	42	16	27.5862
NDUFS1	0	genome.wustl.edu	37	2	207006766	207006768	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	207006766	207006768	AAG	-	DEL	NDUFS1	ENST00000455934	human	ensembl	74_37	-1	known	in_frame_del	c.1203_1201	p.L401in_frame_del	0.933:1.000:1.000	pfam_Mopterin_OxRdtase,tigrfam_NADH_UbQ_OxRdtase_Gsu	pfam_Mopterin_OxRdtase,pfam_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfam_NuoG_C,pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,smart_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfscan_2Fe-2S_ferredoxin-type,tigrfam_NADH_UbQ_OxRdtase_Gsu	-	no_errors	NDUFS1	HGNC	ENSG00000023228				51	0	0	29	9	23.6842
MAP2	0	genome.wustl.edu	37	2	210561667	210561667	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	210561667	210561667	A	-	DEL	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	frame_shift_del	c.4414	p.T1474fs	1.000	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018				50	0	0	33	8	19.5122
ABCA12	0	genome.wustl.edu	37	2	215890463	215890463	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	215890463	215890463	T	-	DEL	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	frame_shift_del	c.1221	p.K407fs	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452				77	0	0	32	14	30.4348
STK16	0	genome.wustl.edu	37	2	220110632	220110632	+	RNA	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	220110632	220110632	C	-	DEL	STK16	ENST00000486813	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	STK16	HGNC	ENSG00000115661				18	0	0	12	3	20
DOCK10	0	genome.wustl.edu	37	2	225729790	225729790	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	225729790	225729790	A	-	DEL	DOCK10	ENST00000258390	human	ensembl	74_37	-1	known	frame_shift_del	c.1272	p.F424fs	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905				136	0	0	74	22	22.9167
SP100	0	genome.wustl.edu	37	2	231379990	231379990	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	231379990	231379990	A	-	DEL	SP100	ENST00000264052	human	ensembl	74_37	+1	known	frame_shift_del	c.2275	p.K761fs	1.000	superfamily_HMG_box_dom	pfam_Sp100,pfam_SAND_dom,pfam_HMG_box_dom,superfamily_SAND_dom-like,superfamily_HMG_box_dom,smart_SAND_dom,smart_HMG_box_dom,pfscan_SAND_dom,pfscan_HMG_box_dom	-	no_errors	SP100	HGNC	ENSG00000067066				113	0	0	69	24	25.8065
B3GNT7	0	genome.wustl.edu	37	2	232262821	232262822	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	232262821	232262822	-	G	INS	B3GNT7	ENST00000287590	human	ensembl	74_37	+1	known	frame_shift_ins	c.391_392	p.D133fs	0.000:0.000	NULL	pfam_Glyco_trans_31,pfam_Fringe-like	-	no_errors	B3GNT7	HGNC	ENSG00000156966				56	0	0	47	7	12.963
ESPNL	0	genome.wustl.edu	37	2	239016577	239016577	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	239016577	239016577	C	-	DEL	ESPNL	ENST00000343063	human	ensembl	74_37	+1	known	frame_shift_del	c.818	p.L275fs	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ESPNL	HGNC	ENSG00000144488				57	0	0	32	10	23.8095
CAD	0	genome.wustl.edu	37	2	27457496	27457496	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	27457496	27457496	G	-	DEL	CAD	ENST00000264705	human	ensembl	74_37	+1	known	frame_shift_del	c.3729	p.E1245fs	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				87	0	0	60	15	20
SLC30A3	0	genome.wustl.edu	37	2	27478188	27478188	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	27478188	27478188	G	-	DEL	SLC30A3	ENST00000233535	human	ensembl	74_37	-1	known	frame_shift_del	c.1159	p.Q387fs	0.942	NULL	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A3	HGNC	ENSG00000115194				123	0	0	74	21	22.1053
MSH6	0	genome.wustl.edu	37	2	48030639	48030640	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	48030639	48030640	-	C	INS	MSH6	ENST00000234420	human	ensembl	74_37	+1	known	frame_shift_ins	c.3253_3254	p.F1088fs	0.001:0.003	pfam_DNA_mismatch_repair_MutS_C,superfamily_P-loop_NTPase,smart_DNA_mismatch_repair_MutS_core,pirsf_DNA_mismatch_repair_Msh6	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_core,pfam_PWWP_dom,pfam_DNA_mismatch_repair_MutS_clamp,pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_PWWP_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_Msh6,pfscan_PWWP_dom	-	no_errors	MSH6	HGNC	ENSG00000116062				88	0	0	53	13	19.697
VRK2	0	genome.wustl.edu	37	2	58366815	58366815	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	58366815	58366815	T	-	DEL	VRK2	ENST00000340157	human	ensembl	74_37	+1	known	frame_shift_del	c.871	p.L292fs	0.935	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	VRK2	HGNC	ENSG00000028116				44	0	0	29	4	12.1212
FANCL	0	genome.wustl.edu	37	2	58392978	58392978	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	58392978	58392978	A	-	DEL	FANCL	ENST00000233741	human	ensembl	74_37	-1	known	frame_shift_del	c.572	p.L191fs	1.000	pfam_FancL_WD-rpt_cont_dom	pfam_FancL_WD-rpt_cont_dom	-	no_errors	FANCL	HGNC	ENSG00000115392				120	1	0.826446	37	6	13.9535
BCL11A	0	genome.wustl.edu	37	2	60688199	60688200	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	60688199	60688200	-	C	INS	BCL11A	ENST00000335712	human	ensembl	74_37	-1	known	frame_shift_ins	c.1848_1847	p.L617fs	1.000:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11A	HGNC	ENSG00000119866				65	0	0	38	12	24
ENSG00000273398	0	genome.wustl.edu	37	2	68385129	68385130	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	68385129	68385130	-	A	INS	ENSG00000273398	ENST00000406334	human	ensembl	74_37	-1	known	frame_shift_ins	c.561_560	p.L187fs	0.018:0.026	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	RP11-474G23.1	Clone_based_vega_gene	ENSG00000273398				105	0	0	48	10	17.2414
FAHD2CP	0	genome.wustl.edu	37	2	96687157	96687157	+	RNA	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	2	96687157	96687157	C	-	DEL	FAHD2CP	ENST00000443258	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FAHD2CP	HGNC	ENSG00000231584				21	0	0	17	4	19.0476
JAG1	0	genome.wustl.edu	37	20	10620245	10620245	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	10620245	10620245	G	-	DEL	JAG1	ENST00000254958	human	ensembl	74_37	-1	known	frame_shift_del	c.3558	p.N1187fs	1.000	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	JAG1	HGNC	ENSG00000101384				343	1	0.290698	293	48	14.0762
PAX1	0	genome.wustl.edu	37	20	21690007	21690007	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	21690007	21690007	C	-	DEL	PAX1	ENST00000398485	human	ensembl	74_37	+1	known	frame_shift_del	c.1207	p.A406fs	1.000	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX1	HGNC	ENSG00000125813				76	0	0	62	9	12.6761
CD93	0	genome.wustl.edu	37	20	23066469	23066469	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	23066469	23066469	C	-	DEL	CD93	ENST00000246006	human	ensembl	74_37	-1	known	frame_shift_del	c.361	p.E121fs	0.689	pirsf_CD93/CD141,pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810				26	0	0	19	11	36.6667
CST1	0	genome.wustl.edu	37	20	23729754	23729754	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	23729754	23729754	C	-	DEL	CST1	ENST00000304749	human	ensembl	74_37	-1	known	frame_shift_del	c.241	p.V81fs	0.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST1	HGNC	ENSG00000170373				314	1	0.31746	298	25	7.73994
HM13	0	genome.wustl.edu	37	20	30142485	30142487	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	30142485	30142487	AAA	-	DEL	HM13	ENST00000474466	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.172:0.159:0.155	-	-	-	no_errors	HM13	HGNC	ENSG00000101294				34	0	0	22	12	35.2941
BPIFB4	0	genome.wustl.edu	37	20	31671214	31671214	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	31671214	31671214	C	-	DEL	BPIFB4	ENST00000375483	human	ensembl	74_37	+1	known	frame_shift_del	c.211	p.P73fs	0.030	NULL	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191				158	1	0.628931	129	36	21.8182
ACSS2	0	genome.wustl.edu	37	20	33502206	33502206	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	33502206	33502206	C	-	DEL	ACSS2	ENST00000253382	human	ensembl	74_37	+1	known	frame_shift_del	c.800	p.P269fs	0.850	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS2	HGNC	ENSG00000131069				51	0	0	39	7	15.2174
CPNE1	0	genome.wustl.edu	37	20	34214056	34214056	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	34214056	34214056	A	-	DEL	CPNE1	ENST00000498814	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	CPNE1	HGNC	ENSG00000214078				148	0	0	115	24	17.2662
MMP9	0	genome.wustl.edu	37	20	44641172	44641172	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	44641172	44641172	G	-	DEL	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	frame_shift_del	c.1281	p.431fs	0.420	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,prints_Pept_M10A	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				128	0	0	118	27	18.6207
ARFGEF2	0	genome.wustl.edu	37	20	47605030	47605030	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	47605030	47605030	A	-	DEL	ARFGEF2	ENST00000371917	human	ensembl	74_37	+1	known	frame_shift_del	c.2364	p.N790fs	1.000	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF2	HGNC	ENSG00000124198				83	0	0	42	15	26.3158
ZNFX1	0	genome.wustl.edu	37	20	47864399	47864399	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	47864399	47864399	T	-	DEL	ZNFX1	ENST00000371752	human	ensembl	74_37	-1	known	frame_shift_del	c.5162	p.K1721fs	0.050	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_Znf_NFX1	-	no_errors	ZNFX1	HGNC	ENSG00000124201				272	0	0	239	45	15.8451
SPATA2	0	genome.wustl.edu	37	20	48522803	48522803	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	48522803	48522803	G	-	DEL	SPATA2	ENST00000289431	human	ensembl	74_37	-1	known	frame_shift_del	c.916	p.H306fs	0.960	NULL	NULL	-	no_errors	SPATA2	HGNC	ENSG00000158480				150	0	0	148	27	15.4286
LAMA5	0	genome.wustl.edu	37	20	60897206	60897206	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	60897206	60897206	C	-	DEL	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	frame_shift_del	c.6365	p.G2122fs	1.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				31	0	0	31	8	20.5128
DIDO1	0	genome.wustl.edu	37	20	61513485	61513486	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	61513485	61513486	-	T	INS	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	frame_shift_ins	c.3823_3822	p.V1274fs	0.001:0.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				281	2	0.706714	237	50	17.4216
KCNQ2	0	genome.wustl.edu	37	20	62038661	62038661	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	62038661	62038661	G	-	DEL	KCNQ2	ENST00000354587	human	ensembl	74_37	-1	known	frame_shift_del	c.1979	p.P660fs	0.945	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ2	HGNC	ENSG00000075043				109	0	0	79	15	15.9574
RTEL1	0	genome.wustl.edu	37	20	62320919	62320920	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	20	62320919	62320920	-	C	INS	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	frame_shift_ins	c.1943_1944	p.R651fs	0.991:0.994	superfamily_P-loop_NTPase,smart_ATP-dep_Helicase_C,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366				46	0	0	45	12	21.0526
ITSN1	0	genome.wustl.edu	37	21	35122566	35122567	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	35122566	35122567	-	C	INS	ITSN1	ENST00000381285	human	ensembl	74_37	+1	known	frame_shift_ins	c.465_466	p.L157fs	0.999:1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,superfamily_P-loop_NTPase,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN1	HGNC	ENSG00000205726				124	0	0	88	18	16.9811
DSCAM	0	genome.wustl.edu	37	21	41710097	41710097	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	41710097	41710097	C	-	DEL	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	frame_shift_del	c.1714	p.E572fs	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587				187	0	0	113	31	21.5278
MCM3AP-AS1	0	genome.wustl.edu	37	21	47662900	47662902	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	21	47662900	47662902	AAA	-	DEL	MCM3AP-AS1	ENST00000421927	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	MCM3AP-AS1	HGNC	ENSG00000215424				43	0	0	23	11	32.3529
IL17RA	0	genome.wustl.edu	37	22	17589491	17589491	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	17589491	17589491	G	-	DEL	IL17RA	ENST00000319363	human	ensembl	74_37	+1	known	frame_shift_del	c.1382	p.A463fs	0.264	pfam_SEFIR	pfam_SEFIR	-	no_errors	IL17RA	HGNC	ENSG00000177663				89	0	0	51	17	25
MED15	0	genome.wustl.edu	37	22	20936976	20936976	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	20936976	20936976	C	-	DEL	MED15	ENST00000263205	human	ensembl	74_37	+1	known	frame_shift_del	c.1351	p.Q453fs	1.000	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917				60	0	0	28	17	37.7778
PI4KA	0	genome.wustl.edu	37	22	21087260	21087261	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	21087260	21087261	-	G	INS	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	frame_shift_ins	c.4287_4286	p.D1430fs	0.999:1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PI4KA	HGNC	ENSG00000241973				68	0	0	59	10	14.4928
LZTR1	0	genome.wustl.edu	37	22	21340148	21340150	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	21340148	21340150	CCT	-	DEL	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	in_frame_del	c.282_284	p.L96in_frame_del	0.998:1.000:0.998	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949				98	0	0	71	14	16.4706
GNAZ	0	genome.wustl.edu	37	22	23438487	23438488	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	23438487	23438488	-	G	INS	GNAZ	ENST00000248996	human	ensembl	74_37	+1	known	frame_shift_ins	c.605_606	p.Q205fs	1.000:1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAZ	HGNC	ENSG00000128266				307	0	0	192	58	23.2
MN1	0	genome.wustl.edu	37	22	28146770	28146771	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	28146770	28146771	AA	-	DEL	MN1	ENST00000497225	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.985:0.973	-	-	-	no_errors	MN1	HGNC	ENSG00000169184				12	0	0	5	3	37.5
MN1	0	genome.wustl.edu	37	22	28196403	28196403	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	28196403	28196403	C	-	DEL	MN1	ENST00000302326	human	ensembl	74_37	-1	known	frame_shift_del	c.129	p.P45fs	0.973	NULL	NULL	-	no_errors	MN1	HGNC	ENSG00000169184				122	0	0	100	22	18.0328
OSM	0	genome.wustl.edu	37	22	30660116	30660117	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	30660116	30660117	-	C	INS	OSM	ENST00000215781	human	ensembl	74_37	-1	known	frame_shift_ins	c.515_514	p.A172fs	0.000:0.000	pfam_Leukemia_IF/oncostatin,superfamily_4_helix_cytokine-like_core,smart_Leukemia_IF/oncostatin	pfam_Leukemia_IF/oncostatin,superfamily_4_helix_cytokine-like_core,smart_Leukemia_IF/oncostatin	-	no_errors	OSM	HGNC	ENSG00000099985				66	0	0	38	7	15.5556
SMTN	0	genome.wustl.edu	37	22	31485922	31485922	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	31485922	31485922	C	-	DEL	SMTN	ENST00000347557	human	ensembl	74_37	+1	known	frame_shift_del	c.709	p.S239fs	0.420	NULL	pfam_Smoothelin,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963				20	0	0	20	8	28.5714
LIMK2	0	genome.wustl.edu	37	22	31672777	31672777	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	31672777	31672777	C	-	DEL	LIMK2	ENST00000340552	human	ensembl	74_37	+1	putative	frame_shift_del	c.1712	p.575fs	0.996	smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PP1_inhibitor,pfam_PDZ,pfam_Znf_LIM,superfamily_Kinase-like_dom,superfamily_PP1_inhibitor,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK2	HGNC	ENSG00000182541				35	0	0	23	6	20.6897
CELSR1	0	genome.wustl.edu	37	22	46761168	46761168	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	22	46761168	46761168	T	-	DEL	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	frame_shift_del	c.8514	p.K2838fs	0.040	NULL	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				50	0	0	30	22	42.3077
UMPS	0	genome.wustl.edu	37	3	124456635	124456636	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	124456635	124456636	-	A	INS	UMPS	ENST00000232607	human	ensembl	74_37	+1	known	frame_shift_ins	c.531_532	p.M178fs	0.237:0.015	tigrfam_Or_phspho_trans_dom	pfam_OMPdeCOase_dom,pfam_PRibTrfase_dom,superfamily_RibuloseP-bd_barrel,smart_OMPdeCOase_dom,tigrfam_OMPdecase,tigrfam_Or_phspho_trans_dom	-	no_errors	UMPS	HGNC	ENSG00000114491				55	0	0	42	11	20.7547
PBX2P1	0	genome.wustl.edu	37	3	142895292	142895292	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	142895292	142895292	G	-	DEL	PBX2P1	ENST00000560287	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	PBX2P1	HGNC	ENSG00000244171				86	0	0	48	17	26.1538
PLSCR1	0	genome.wustl.edu	37	3	146234963	146234963	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	146234963	146234963	A	-	DEL	PLSCR1	ENST00000484560	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.163	-	-	-	no_errors	PLSCR1	HGNC	ENSG00000188313				41	0	0	24	8	25
TM4SF4	0	genome.wustl.edu	37	3	149192694	149192694	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	149192694	149192694	G	-	DEL	TM4SF4	ENST00000305354	human	ensembl	74_37	+1	known	frame_shift_del	c.30	p.T13fs	1.000	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF4	HGNC	ENSG00000169903				60	0	0	36	13	26.5306
NR2C2	0	genome.wustl.edu	37	3	15084406	15084406	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	15084406	15084406	T	-	DEL	NR2C2	ENST00000323373	human	ensembl	74_37	+1	known	frame_shift_del	c.1739	p.F582fs	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	-	no_errors	NR2C2	HGNC	ENSG00000177463				67	0	0	40	17	29.8246
IGSF10	0	genome.wustl.edu	37	3	151165427	151165427	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	151165427	151165427	G	-	DEL	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	frame_shift_del	c.2342	p.P781fs	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				92	0	0	63	22	25.8824
SMC4	0	genome.wustl.edu	37	3	160143940	160143940	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	160143940	160143940	A	-	DEL	SMC4	ENST00000344722	human	ensembl	74_37	+1	known	frame_shift_del	c.2557	p.K855fs	0.998	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase,superfamily_Chemotax_Me-accpt_rcpt_lig-bd	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810				234	0	0	180	45	20
MECOM	0	genome.wustl.edu	37	3	169381201	169381201	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	169381201	169381201	T	-	DEL	MECOM	ENST00000485957	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MECOM	HGNC	ENSG00000085276				22	0	0	15	2	11.7647
FXR1	0	genome.wustl.edu	37	3	180666228	180666228	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	180666228	180666228	A	-	DEL	FXR1	ENST00000357559	human	ensembl	74_37	+1	known	frame_shift_del	c.364	p.N124fs	1.000	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,superfamily_NA-bd_OB-fold,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR1	HGNC	ENSG00000114416				84	0	0	48	7	12.7273
ATP11B	0	genome.wustl.edu	37	3	182602674	182602674	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	182602674	182602674	T	-	DEL	ATP11B	ENST00000323116	human	ensembl	74_37	+1	known	frame_shift_del	c.2643	p.Y884fs	1.000	tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11B	HGNC	ENSG00000058063				69	0	0	26	11	29.7297
B3GNT5	0	genome.wustl.edu	37	3	182987674	182987674	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	182987674	182987674	T	-	DEL	B3GNT5	ENST00000326505	human	ensembl	74_37	+1	known	frame_shift_del	c.88	p.W32fs	0.912	NULL	pfam_Glyco_trans_31,superfamily_Luciferase-like_dom	-	no_errors	B3GNT5	HGNC	ENSG00000176597				109	0	0	66	28	29.7872
ABCC5	0	genome.wustl.edu	37	3	183703209	183703209	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	183703209	183703209	C	-	DEL	ABCC5	ENST00000443376	human	ensembl	74_37	-1	known	frame_shift_del	c.626	p.G209fs	0.999	NULL	NULL	-	no_errors	ABCC5	HGNC	ENSG00000114770				134	0	0	92	24	20.6897
ENSG00000232783	0	genome.wustl.edu	37	3	197838274	197838276	+	RNA	DEL	AAA	AAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	197838274	197838276	AAA	-	DEL	ENSG00000232783	ENST00000411596	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001:0.001	-	-	-	no_errors	AC073135.3	Clone_based_vega_gene	ENSG00000232783				17	0	0	11	5	31.25
CLASP2	0	genome.wustl.edu	37	3	33686903	33686903	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	33686903	33686903	A	-	DEL	CLASP2	ENST00000476433	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.963	-	-	-	no_errors	CLASP2	HGNC	ENSG00000163539				46	0	0	22	7	24.1379
SCN10A	0	genome.wustl.edu	37	3	38781162	38781162	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	38781162	38781162	A	-	DEL	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	frame_shift_del	c.2124	p.F708fs	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				61	0	0	31	14	31.1111
ZBTB47	0	genome.wustl.edu	37	3	42700957	42700957	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	42700957	42700957	C	-	DEL	ZBTB47	ENST00000232974	human	ensembl	74_37	+1	known	frame_shift_del	c.1110	p.P372fs	0.000	NULL	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB47	HGNC	ENSG00000114853				31	0	0	14	3	17.6471
PBRM1	0	genome.wustl.edu	37	3	52643771	52643771	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	52643771	52643771	T	-	DEL	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	frame_shift_del	c.2125	p.I709fs	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939				140	0	0	57	17	22.973
APPL1	0	genome.wustl.edu	37	3	57276921	57276921	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	57276921	57276921	A	-	DEL	APPL1	ENST00000288266	human	ensembl	74_37	+1	known	frame_shift_del	c.453	p.R154fs	0.881	NULL	pfam_PTB/PI_dom,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL1	HGNC	ENSG00000157500				46	0	0	22	9	29.0323
DENND6A	0	genome.wustl.edu	37	3	57619023	57619023	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	57619023	57619023	A	-	DEL	DENND6A	ENST00000311128	human	ensembl	74_37	-1	known	frame_shift_del	c.1322	p.L441fs	1.000	pfam_Afi1_N	pfam_Afi1_N,pfam_ABL9/DENND6_dom,pfam_DENN_dom	-	no_errors	DENND6A	HGNC	ENSG00000174839				79	0	0	61	15	19.7368
FLNB	0	genome.wustl.edu	37	3	58067447	58067448	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	58067447	58067448	-	G	INS	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	frame_shift_ins	c.731_732	p.A246fs	1.000:0.002	NULL	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				166	0	0	96	23	19.3277
ADAMTS9	0	genome.wustl.edu	37	3	64666919	64666919	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	64666919	64666919	G	-	DEL	ADAMTS9	ENST00000498707	human	ensembl	74_37	-1	known	frame_shift_del	c.637	p.Q213fs	0.003	NULL	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS9	HGNC	ENSG00000163638				52	0	0	27	6	18.1818
FOXP1	0	genome.wustl.edu	37	3	71064695	71064698	+	Splice_Site	DEL	CTTA	CTTA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTTA	CTTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	71064695	71064698	CTTA	-	DEL	FOXP1	ENST00000318789	human	ensembl	74_37	-1	known	splice_site_del	c.974+2_974+1	e7+2	1.000:1.000:1.000:1.000	-	-	-	no_errors	FOXP1	HGNC	ENSG00000114861				50	0	0	26	7	21.2121
IL17RC	0	genome.wustl.edu	37	3	9958948	9958948	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	3	9958948	9958948	G	-	DEL	IL17RC	ENST00000498214	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IL17RC	HGNC	ENSG00000163702				23	0	0	22	6	21.4286
LARP7	0	genome.wustl.edu	37	4	113570754	113570754	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	113570754	113570754	A	-	DEL	LARP7	ENST00000324052	human	ensembl	74_37	+1	known	frame_shift_del	c.1206	p.T405fs	1.000	NULL	pfam_RRM_3,pfam_Lupus_La_RNA-bd,pfam_RRM_dom,smart_Lupus_La_RNA-bd,smart_RRM_dom,pfscan_Lupus_La_RNA-bd,pfscan_RRM_dom,prints_Lupus_La	-	no_errors	LARP7	HGNC	ENSG00000174720				22	0	0	10	5	33.3333
ANK2	0	genome.wustl.edu	37	4	114280135	114280135	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	114280135	114280135	G	-	DEL	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	frame_shift_del	c.10361	p.G3456fs	0.005	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				92	0	0	54	15	21.7391
ANKRD50	0	genome.wustl.edu	37	4	125590728	125590728	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	125590728	125590728	G	-	DEL	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	frame_shift_del	c.3704	p.P1235fs	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458				296	0	0	178	41	18.7215
SCLT1	0	genome.wustl.edu	37	4	129864162	129864163	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	129864162	129864163	-	T	INS	SCLT1	ENST00000281142	human	ensembl	74_37	-1	known	frame_shift_ins	c.1621_1620	p.A540fs	1.000:1.000	NULL	NULL	-	no_errors	SCLT1	HGNC	ENSG00000151466				99	0	0	29	9	23.6842
RAB33B	0	genome.wustl.edu	37	4	140394218	140394218	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	140394218	140394218	C	-	DEL	RAB33B	ENST00000305626	human	ensembl	74_37	+1	known	frame_shift_del	c.628	p.P211fs	1.000	smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB33B	HGNC	ENSG00000172007				101	0	0	57	12	17.3913
ABCE1	0	genome.wustl.edu	37	4	146041093	146041093	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	146041093	146041093	T	-	DEL	ABCE1	ENST00000296577	human	ensembl	74_37	+1	known	frame_shift_del	c.932	p.L313fs	1.000	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,pfam_RNaseL-inhib_metal-bd_dom,pfam_4Fe4S-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,prints_ABC_E	-	no_errors	ABCE1	HGNC	ENSG00000164163				34	0	0	20	5	20
CPEB2	0	genome.wustl.edu	37	4	15067858	15067858	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	15067858	15067858	T	-	DEL	CPEB2	ENST00000538197	human	ensembl	74_37	+1	known	frame_shift_del	c.2959	p.C989fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPEB2	HGNC	ENSG00000137449				176	0	0	95	19	16.6667
ZFYVE28	0	genome.wustl.edu	37	4	2343294	2343294	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	2343294	2343294	G	-	DEL	ZFYVE28	ENST00000290974	human	ensembl	74_37	-1	known	frame_shift_del	c.229	p.Q77fs	0.244	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE28	HGNC	ENSG00000159733				115	1	0.862069	74	15	16.8539
TMEM33	0	genome.wustl.edu	37	4	41956157	41956159	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	41956157	41956159	AGA	-	DEL	TMEM33	ENST00000325094	human	ensembl	74_37	+1	known	in_frame_del	c.685_687	p.R230in_frame_del	1.000:1.000:1.000	pfam_UPF0121	pfam_UPF0121	-	no_errors	TMEM33	HGNC	ENSG00000109133				120	0	0	64	16	20
USP46	0	genome.wustl.edu	37	4	53492314	53492314	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	53492314	53492314	T	-	DEL	USP46	ENST00000441222	human	ensembl	74_37	-1	known	frame_shift_del	c.432	p.K144fs	0.996	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP46	HGNC	ENSG00000109189				56	0	0	26	6	18.75
AFM	0	genome.wustl.edu	37	4	74347531	74347532	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	74347531	74347532	-	T	INS	AFM	ENST00000226355	human	ensembl	74_37	+1	known	frame_shift_ins	c.39_40	p.L15fs	0.970:0.970	pirsf_Serum_albumin/AFP	pirsf_Serum_albumin/AFP,pfam_Serum_albumin_N,superfamily_Serum_albumin-like,smart_Serum_albumin_N,prints_ALB/AFP/VDB,prints_Alpha-fetoprotein	-	no_errors	AFM	HGNC	ENSG00000079557				51	0	0	21	4	16
C4orf26	0	genome.wustl.edu	37	4	76489680	76489680	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	76489680	76489680	A	-	DEL	C4orf26	ENST00000435974	human	ensembl	74_37	+1	putative	frame_shift_del	c.468	p.S159fs	0.001	NULL	NULL	-	no_errors	C4orf26	HGNC	ENSG00000174792				128	1	0.775194	60	19	24.0506
ANTXR2	0	genome.wustl.edu	37	4	80905990	80905990	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	80905990	80905990	C	-	DEL	ANTXR2	ENST00000307333	human	ensembl	74_37	-1	known	frame_shift_del	c.1069	p.A357fs	0.559	pirsf_Anthrax_toxin_rcpt	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_C,pfam_Anthrax_toxin_rcpt_extracel,pfam_VWF_A,superfamily_Ig_E-set,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR2	HGNC	ENSG00000163297				16	0	0	18	8	30.7692
FGF5	0	genome.wustl.edu	37	4	81188116	81188119	+	Frame_Shift_Del	DEL	CAGA	CAGA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CAGA	CAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	81188116	81188119	CAGA	-	DEL	FGF5	ENST00000312465	human	ensembl	74_37	+1	known	frame_shift_del	c.138_141	p.Q48fs	0.152:0.005:0.044:0.004	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF5	HGNC	ENSG00000138675				139	0	0	75	20	21.0526
NKX6-1	0	genome.wustl.edu	37	4	85419145	85419145	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	4	85419145	85419145	C	-	DEL	NKX6-1	ENST00000295886	human	ensembl	74_37	-1	known	frame_shift_del	c.237	p.L80fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	NKX6-1	HGNC	ENSG00000163623				27	0	0	15	4	21.0526
DMXL1	0	genome.wustl.edu	37	5	118469635	118469635	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	118469635	118469635	T	-	DEL	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	frame_shift_del	c.2016	p.F673fs	0.021	superfamily_WD40_repeat_dom	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869				100	0	0	42	21	33.3333
HSD17B4	0	genome.wustl.edu	37	5	118810104	118810106	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	118810104	118810106	GAA	-	DEL	HSD17B4	ENST00000256216	human	ensembl	74_37	+1	known	in_frame_del	c.229_231	p.E78in_frame_del	1.000:1.000:1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,smart_PKS/FAS_KR	pfam_MaoC_dom,pfam_DH_sc/Rdtase_SDR,pfam_SCP2_sterol-bd_dom,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B4	HGNC	ENSG00000133835				162	0	0	76	19	20
WDR55	0	genome.wustl.edu	37	5	140049102	140049102	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140049102	140049102	A	-	DEL	WDR55	ENST00000358337	human	ensembl	74_37	+1	known	frame_shift_del	c.1015	p.K341fs	1.000	pirsf_WD_repeat_p55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p55,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR55	HGNC	ENSG00000120314				61	0	0	29	8	21.6216
PCDHB1	0	genome.wustl.edu	37	5	140431111	140431111	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	140431111	140431111	T	-	DEL	PCDHB1	ENST00000306549	human	ensembl	74_37	+1	known	frame_shift_del	c.56	p.L21fs	0.814	pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB1	HGNC	ENSG00000171815				93	0	0	50	16	24.2424
ARAP3	0	genome.wustl.edu	37	5	141052865	141052866	+	RNA	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	141052865	141052866	-	C	INS	ARAP3	ENST00000524066	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	ARAP3	HGNC	ENSG00000120318				22	0	0	14	3	17.6471
TRIO	0	genome.wustl.edu	37	5	14477004	14477004	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	14477004	14477004	T	-	DEL	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	frame_shift_del	c.6085	p.L2031fs	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382				32	0	0	22	11	33.3333
TCERG1	0	genome.wustl.edu	37	5	145886723	145886723	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	145886723	145886723	A	-	DEL	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	frame_shift_del	c.2863	p.K957fs	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649				110	0	0	66	20	23.2558
LARP1	0	genome.wustl.edu	37	5	154173390	154173390	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	154173390	154173390	C	-	DEL	LARP1	ENST00000336314	human	ensembl	74_37	+1	known	frame_shift_del	c.668	p.T226fs	0.999	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1	HGNC	ENSG00000155506				444	0	0	291	74	20.274
KIF4B	0	genome.wustl.edu	37	5	154395428	154395430	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	154395428	154395430	AAG	-	DEL	KIF4B	ENST00000435029	human	ensembl	74_37	+1	known	in_frame_del	c.2009_2011	p.E671in_frame_del	1.000:1.000:1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4B	HGNC	ENSG00000226650				174	0	0	87	30	25.641
SPDL1	0	genome.wustl.edu	37	5	169028407	169028410	+	Frame_Shift_Del	DEL	AGAA	AGAA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AGAA	AGAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	169028407	169028410	AGAA	-	DEL	SPDL1	ENST00000265295	human	ensembl	74_37	+1	known	frame_shift_del	c.1448_1451	p.K484fs	0.000:0.002:0.021:0.018	NULL	NULL	-	no_errors	SPDL1	HGNC	ENSG00000040275				108	0	0	71	21	22.8261
PROP1	0	genome.wustl.edu	37	5	177419762	177419762	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	177419762	177419762	G	-	DEL	PROP1	ENST00000308304	human	ensembl	74_37	-1	known	frame_shift_del	c.629	p.P210fs	0.917	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	PROP1	HGNC	ENSG00000175325				28	0	0	23	5	17.8571
SLC1A3	0	genome.wustl.edu	37	5	36679799	36679799	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	36679799	36679799	G	-	DEL	SLC1A3	ENST00000265113	human	ensembl	74_37	+1	known	frame_shift_del	c.931	p.Q313fs	1.000	pfam_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A3	HGNC	ENSG00000079215				288	0	0	181	37	16.9725
C5orf42	0	genome.wustl.edu	37	5	37196015	37196015	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	37196015	37196015	A	-	DEL	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	frame_shift_del	c.3756	p.F1252fs	0.953	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603				67	0	0	40	11	21.5686
OSMR	0	genome.wustl.edu	37	5	38923329	38923329	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	38923329	38923329	A	-	DEL	OSMR	ENST00000274276	human	ensembl	74_37	+1	known	frame_shift_del	c.1843	p.T617fs	0.981	pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	OSMR	HGNC	ENSG00000145623				56	0	0	35	11	23.913
RICTOR	0	genome.wustl.edu	37	5	38954826	38954826	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	38954826	38954826	T	-	DEL	RICTOR	ENST00000503698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RICTOR	HGNC	ENSG00000164327				28	0	0	7	4	36.3636
ITGA2	0	genome.wustl.edu	37	5	52351981	52351982	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	52351981	52351982	-	A	INS	ITGA2	ENST00000296585	human	ensembl	74_37	+1	known	splice_site_ins	c.1096+2_1096+1	e9+2	1.000:1.000	-	-	-	no_errors	ITGA2	HGNC	ENSG00000164171				62	0	0	44	14	24.1379
AGGF1	0	genome.wustl.edu	37	5	76358967	76358967	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	76358967	76358967	A	-	DEL	AGGF1	ENST00000312916	human	ensembl	74_37	+1	known	frame_shift_del	c.2035	p.N681fs	1.000	NULL	pfam_FHA_dom,pfam_G_patch_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_G_patch_dom,pfscan_FHA_dom,pfscan_G_patch_dom	-	no_errors	AGGF1	HGNC	ENSG00000164252				310	0	0	198	49	19.8381
AP3B1	0	genome.wustl.edu	37	5	77334907	77334907	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	77334907	77334907	T	-	DEL	AP3B1	ENST00000255194	human	ensembl	74_37	-1	known	frame_shift_del	c.2769	p.K923fs	0.419	pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	-	no_errors	AP3B1	HGNC	ENSG00000132842				59	0	0	22	4	15.3846
FASTKD3	0	genome.wustl.edu	37	5	7867527	7867527	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	7867527	7867527	T	-	DEL	FASTKD3	ENST00000264669	human	ensembl	74_37	-1	known	frame_shift_del	c.670	p.S224fs	0.923	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD3	HGNC	ENSG00000124279				141	0	0	84	18	17.6471
PAPD4	0	genome.wustl.edu	37	5	78936937	78936937	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	78936937	78936937	T	-	DEL	PAPD4	ENST00000296783	human	ensembl	74_37	+1	known	frame_shift_del	c.590	p.L199fs	1.000	NULL	pfam_PAP_assoc	-	no_errors	PAPD4	HGNC	ENSG00000164329				180	0	0	98	27	21.6
CMYA5	0	genome.wustl.edu	37	5	79030062	79030062	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	79030062	79030062	A	-	DEL	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	frame_shift_del	c.5474	p.A1827fs	0.001	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				77	0	0	58	12	17.1429
MSH3	0	genome.wustl.edu	37	5	79970915	79970915	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	79970915	79970915	A	-	DEL	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.K383fs	0.982	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318				192	1	0.518135	103	20	16.2602
GLRX	0	genome.wustl.edu	37	5	95152332	95152333	+	Splice_Site	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	5	95152332	95152333	-	A	INS	GLRX	ENST00000237858	human	ensembl	74_37	-1	known	splice_site_ins	c.208-3_208-2	e2-2	0.908:0.008	-	-	-	no_errors	GLRX	HGNC	ENSG00000173221				53	0	0	43	7	14
CCNC	0	genome.wustl.edu	37	6	100006296	100006297	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	100006296	100006297	AA	-	DEL	CCNC	ENST00000482541	human	ensembl	74_37	-1	putative	frame_shift_del	c.423_422	p.F141fs	0.007:0.028	superfamily_Cyclin-like	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNC	HGNC	ENSG00000112237				35	0	0	13	11	45.8333
ENSG00000271730	0	genome.wustl.edu	37	6	109319968	109319969	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	109319968	109319969	AA	-	DEL	ENSG00000271730	ENST00000605885	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-787I22.3	Clone_based_vega_gene	ENSG00000271730				73	0	0	51	12	19.0476
GJA1	0	genome.wustl.edu	37	6	121768438	121768438	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	121768438	121768438	G	-	DEL	GJA1	ENST00000282561	human	ensembl	74_37	+1	known	frame_shift_del	c.445	p.L151fs	1.000	prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,pfam_Connexin43_C,smart_Connexin_N,prints_Connexin,prints_Connexin43	-	no_errors	GJA1	HGNC	ENSG00000152661				127	0	0	94	22	18.9655
TRDN	0	genome.wustl.edu	37	6	123759209	123759209	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	123759209	123759209	T	-	DEL	TRDN	ENST00000398178	human	ensembl	74_37	-1	known	frame_shift_del	c.1050	p.E351fs	1.000	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439				26	0	0	6	2	25
RNF217	0	genome.wustl.edu	37	6	125397902	125397902	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	125397902	125397902	T	-	DEL	RNF217	ENST00000560949	human	ensembl	74_37	+1	known	frame_shift_del	c.676	p.F227fs	1.000	smart_Znf_C6HC	pfam_Znf_C6HC,smart_Znf_C6HC	-	no_errors	RNF217	HGNC	ENSG00000146373				154	0	0	108	31	22.3022
SOGA3	0	genome.wustl.edu	37	6	127794447	127794447	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	127794447	127794447	A	-	DEL	SOGA3	ENST00000368268	human	ensembl	74_37	-1	known	frame_shift_del	c.2823	p.F941fs	1.000	NULL	pfam_SOGA	-	no_errors	SOGA3	HGNC	ENSG00000214338				43	0	0	25	4	13.7931
SGK1	0	genome.wustl.edu	37	6	134491976	134491976	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	134491976	134491976	A	-	DEL	SGK1	ENST00000367858	human	ensembl	74_37	-1	known	frame_shift_del	c.1401	p.F467fs	1.000	superfamily_Kinase-like_dom,smart_AGC-kinase_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_Phox,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	SGK1	HGNC	ENSG00000118515				199	0	0	144	26	15.2941
GINM1	0	genome.wustl.edu	37	6	149901801	149901801	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	149901801	149901801	T	-	DEL	GINM1	ENST00000367419	human	ensembl	74_37	+1	known	frame_shift_del	c.659	p.L221fs	0.395	NULL	NULL	-	no_errors	GINM1	HGNC	ENSG00000055211				99	0	0	64	18	21.9512
EZR	0	genome.wustl.edu	37	6	159206452	159206452	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	159206452	159206452	G	-	DEL	EZR	ENST00000337147	human	ensembl	74_37	-1	known	frame_shift_del	c.356	p.P119fs	0.998	pirsf_ERM,pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	EZR	HGNC	ENSG00000092820				110	0	0	68	12	15
FGFR1OP	0	genome.wustl.edu	37	6	167413537	167413537	+	RNA	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	167413537	167413537	T	-	DEL	FGFR1OP	ENST00000476078	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FGFR1OP	HGNC	ENSG00000213066				58	0	0	26	13	33.3333
DLL1	0	genome.wustl.edu	37	6	170594673	170594674	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	170594673	170594674	-	C	INS	DLL1	ENST00000366756	human	ensembl	74_37	-1	known	frame_shift_ins	c.846_845	p.L283fs	0.973:1.000	smart_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL1	HGNC	ENSG00000198719				134	1	0.740741	80	18	18.3673
RBM24	0	genome.wustl.edu	37	6	17292449	17292450	+	RNA	DEL	AA	AA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	17292449	17292450	AA	-	DEL	RBM24	ENST00000508508	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.915:0.719	-	-	-	no_errors	RBM24	HGNC	ENSG00000112183				42	0	0	25	7	21.875
PGBD1	0	genome.wustl.edu	37	6	28268660	28268660	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	28268660	28268660	A	-	DEL	PGBD1	ENST00000259883	human	ensembl	74_37	+1	known	frame_shift_del	c.1029	p.D346fs	0.992	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,pfscan_SRCR,pfscan_Tscrpt_reg_SCAN	-	no_errors	PGBD1	HGNC	ENSG00000137338				102	0	0	76	20	20.8333
EHMT2	0	genome.wustl.edu	37	6	31852571	31852573	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	31852571	31852573	CTC	-	DEL	EHMT2	ENST00000395728	human	ensembl	74_37	-1	known	in_frame_del	c.2625_2623	p.E875in_frame_del	0.926:0.993:0.996	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT2	HGNC	ENSG00000204371				25	0	0	15	4	21.0526
RGL2	0	genome.wustl.edu	37	6	33263965	33263965	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	33263965	33263965	C	-	DEL	RGL2	ENST00000497454	human	ensembl	74_37	-1	known	frame_shift_del	c.608	p.G203fs	1.000	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL2	HGNC	ENSG00000237441				392	1	0.254453	251	57	18.5065
SCUBE3	0	genome.wustl.edu	37	6	35205699	35205699	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	35205699	35205699	G	-	DEL	SCUBE3	ENST00000394681	human	ensembl	74_37	+1	known	frame_shift_del	c.781	p.G262fs	1.000	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,prints_Thrombomodulin	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	SCUBE3	HGNC	ENSG00000146197				214	0	0	126	30	19.2308
MDGA1	0	genome.wustl.edu	37	6	37615063	37615063	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	37615063	37615063	G	-	DEL	MDGA1	ENST00000297153	human	ensembl	74_37	-1	known	frame_shift_del	c.1941	p.N648fs	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA1	HGNC	ENSG00000112139				12	0	0	6	3	33.3333
OARD1	0	genome.wustl.edu	37	6	41037820	41037821	+	Frame_Shift_Ins	INS	-	-	AT			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	41037820	41037821	-	AT	INS	OARD1	ENST00000424266	human	ensembl	74_37	-1	known	frame_shift_ins	c.238_237	p.Y79fs	1.000:1.000	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	-	no_errors	OARD1	HGNC	ENSG00000124596				128	0	0	105	13	11.0169
RPP40	0	genome.wustl.edu	37	6	4995424	4995424	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	4995424	4995424	T	-	DEL	RPP40	ENST00000380051	human	ensembl	74_37	-1	known	frame_shift_del	c.980	p.N327fs	0.067	pfam_RNase_P_Rpp40	pfam_RNase_P_Rpp40	-	no_errors	RPP40	HGNC	ENSG00000124787				67	0	0	39	11	22
HCRTR2	0	genome.wustl.edu	37	6	55039411	55039411	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	55039411	55039411	C	-	DEL	HCRTR2	ENST00000370862	human	ensembl	74_37	+1	known	frame_shift_del	c.26	p.P11fs	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_Orexin_rcpt_2,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt,prints_GPCR_Rhodpsn,prints_Orexin_rcpt_2,prints_NPY_rcpt	-	no_errors	HCRTR2	HGNC	ENSG00000137252				242	0	0	131	31	19.1358
COL12A1	0	genome.wustl.edu	37	6	75866088	75866088	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	75866088	75866088	G	-	DEL	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	frame_shift_del	c.3135	p.T1046fs	0.377	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				117	0	0	69	16	18.8235
KIAA1009	0	genome.wustl.edu	37	6	84862351	84862351	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	84862351	84862351	T	-	DEL	KIAA1009	ENST00000403245	human	ensembl	74_37	-1	known	frame_shift_del	c.3542	p.N1181fs	0.804	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315				12	0	0	12	4	25
HTR1E	0	genome.wustl.edu	37	6	87725847	87725847	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	87725847	87725847	C	-	DEL	HTR1E	ENST00000305344	human	ensembl	74_37	+1	known	frame_shift_del	c.795	p.F268fs	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR1E	HGNC	ENSG00000168830				289	0	0	164	47	22.2749
ZNF292	0	genome.wustl.edu	37	6	87966812	87966812	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	6	87966812	87966812	T	-	DEL	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	frame_shift_del	c.3465	p.L1157fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				65	0	0	36	9	20
MEPCE	0	genome.wustl.edu	37	7	100028068	100028068	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	100028068	100028068	G	-	DEL	MEPCE	ENST00000310512	human	ensembl	74_37	+1	known	frame_shift_del	c.427	p.G145fs	0.496	NULL	pfam_Bin3	-	no_errors	MEPCE	HGNC	ENSG00000146834				42	0	0	36	7	16.2791
PCOLCE	0	genome.wustl.edu	37	7	100205413	100205414	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	100205413	100205414	-	C	INS	PCOLCE	ENST00000223061	human	ensembl	74_37	+1	known	frame_shift_ins	c.1166_1167	p.M392fs	0.992:0.880	pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,smart_Netrin_module_non-TIMP,pfscan_Netrin_domain	pfam_CUB_dom,pfam_Netrin_module_non-TIMP,superfamily_CUB_dom,superfamily_TIMP-like_OB-fold,smart_CUB_dom,smart_Netrin_module_non-TIMP,pfscan_CUB_dom,pfscan_Netrin_domain	-	no_errors	PCOLCE	HGNC	ENSG00000106333				105	0	0	97	8	7.61905
SRRT	0	genome.wustl.edu	37	7	100479331	100479332	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	100479331	100479332	-	G	INS	SRRT	ENST00000388793	human	ensembl	74_37	+1	known	frame_shift_ins	c.303_304	p.G104fs	0.996:1.000	NULL	pfam_Arsenite-R_2,pfam_DUF3546	-	no_errors	SRRT	HGNC	ENSG00000087087				88	0	0	82	13	13.6842
PLOD3	0	genome.wustl.edu	37	7	100855926	100855927	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	100855926	100855927	-	G	INS	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	frame_shift_ins	c.890_889	p.R297fs	1.000:1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397				76	0	0	79	19	19.3878
ALKBH4	0	genome.wustl.edu	37	7	102098353	102098353	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	102098353	102098353	G	-	DEL	ALKBH4	ENST00000292566	human	ensembl	74_37	-1	known	frame_shift_del	c.397	p.R133fs	0.988	NULL	pfam_Oxoglu/Fe-dep_dioxygenase	-	no_errors	ALKBH4	HGNC	ENSG00000160993				82	0	0	55	8	12.6984
SLC26A5	0	genome.wustl.edu	37	7	103061308	103061308	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	103061308	103061308	T	-	DEL	SLC26A5	ENST00000306312	human	ensembl	74_37	-1	known	frame_shift_del	c.169	p.I57fs	1.000	NULL	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A5	HGNC	ENSG00000170615				73	0	0	67	9	11.8421
NRCAM	0	genome.wustl.edu	37	7	107878215	107878215	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	107878215	107878215	T	-	DEL	NRCAM	ENST00000379028	human	ensembl	74_37	-1	known	splice_site_del	c.107-2	e2-2	1.000	-	-	-	no_errors	NRCAM	HGNC	ENSG00000091129				27	0	0	18	4	18.1818
CAV1	0	genome.wustl.edu	37	7	116165158	116165159	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	116165158	116165159	-	G	INS	CAV1	ENST00000451122	human	ensembl	74_37	+1	known	frame_shift_ins	c.42_43	p.A16fs	0.017:0.055	NULL	NULL	-	no_errors	CAV1	HGNC	ENSG00000105974				268	1	0.371747	202	89	30.5842
GRM8	0	genome.wustl.edu	37	7	126173277	126173278	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	126173277	126173278	-	G	INS	GRM8	ENST00000339582	human	ensembl	74_37	-1	known	frame_shift_ins	c.2159_2158	p.H720fs	1.000:0.999	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM8	HGNC	ENSG00000179603				56	0	0	43	9	17.3077
GRM8	0	genome.wustl.edu	37	7	126173396	126173396	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	126173396	126173396	C	-	DEL	GRM8	ENST00000339582	human	ensembl	74_37	-1	known	frame_shift_del	c.2040	p.K681fs	0.866	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM8	HGNC	ENSG00000179603				115	0	0	65	15	18.75
SND1	0	genome.wustl.edu	37	7	127326797	127326798	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	127326797	127326798	-	A	INS	SND1	ENST00000354725	human	ensembl	74_37	+1	known	frame_shift_ins	c.209_210	p.D72fs	0.998:0.946	pfam_Staphylococal_nuclease_OB-fold,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Staphylococal_nuclease_OB-fold	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157				138	0	0	130	20	13.3333
SND1	0	genome.wustl.edu	37	7	127447605	127447606	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	127447605	127447606	-	A	INS	SND1	ENST00000354725	human	ensembl	74_37	+1	known	frame_shift_ins	c.1220_1221	p.L410fs	1.000:1.000	pfam_Staphylococal_nuclease_OB-fold,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Staphylococal_nuclease_OB-fold	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157				101	0	0	57	11	16.1765
OR9A4	0	genome.wustl.edu	37	7	141619203	141619203	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	141619203	141619203	T	-	DEL	OR9A4	ENST00000548136	human	ensembl	74_37	+1	known	frame_shift_del	c.528	p.C179fs	0.509	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9A4	HGNC	ENSG00000258083				174	1	0.571429	123	70	36.2694
TPK1	0	genome.wustl.edu	37	7	144364909	144364909	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	144364909	144364909	G	-	DEL	TPK1	ENST00000482940	human	ensembl	74_37	-1	known	frame_shift_del	c.138	p.S47fs	0.000	NULL	NULL	-	no_errors	TPK1	HGNC	ENSG00000196511				97	0	0	71	29	29
OSBPL3	0	genome.wustl.edu	37	7	24856292	24856292	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	24856292	24856292	T	-	DEL	OSBPL3	ENST00000313367	human	ensembl	74_37	-1	known	frame_shift_del	c.1964	p.N655fs	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL3	HGNC	ENSG00000070882				114	0	0	92	19	17.1171
HOXA3	0	genome.wustl.edu	37	7	27147982	27147982	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	27147982	27147982	G	-	DEL	HOXA3	ENST00000317201	human	ensembl	74_37	-1	known	frame_shift_del	c.884	p.P295fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXA3	HGNC	ENSG00000105997				90	0	0	66	15	18.5185
CARD11	0	genome.wustl.edu	37	7	2968323	2968323	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	2968323	2968323	G	-	DEL	CARD11	ENST00000396946	human	ensembl	74_37	-1	known	frame_shift_del	c.1663	p.R555fs	0.080	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD	-	no_errors	CARD11	HGNC	ENSG00000198286				143	0	0	115	58	33.526
ELMO1	0	genome.wustl.edu	37	7	37311468	37311468	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	37311468	37311468	T	-	DEL	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	frame_shift_del	c.212	p.N71fs	1.000	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849				82	0	0	51	13	20.3125
INHBA	0	genome.wustl.edu	37	7	41730049	41730049	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	41730049	41730049	T	-	DEL	INHBA	ENST00000242208	human	ensembl	74_37	-1	known	frame_shift_del	c.480	p.V161fs	1.000	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaA,prints_Inhibin_asu	-	no_errors	INHBA	HGNC	ENSG00000122641				141	0	0	110	17	13.3858
HECW1	0	genome.wustl.edu	37	7	43591890	43591891	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	43591890	43591891	-	A	INS	HECW1	ENST00000395891	human	ensembl	74_37	+1	known	frame_shift_ins	c.4465_4466	p.I1490fs	1.000:1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW1	HGNC	ENSG00000002746				123	0	0	94	24	20.339
MYL7	0	genome.wustl.edu	37	7	44178493	44178494	+	RNA	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	44178493	44178494	-	C	INS	MYL7	ENST00000434895	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MYL7	HGNC	ENSG00000106631				58	0	0	55	13	19.1176
ZMIZ2	0	genome.wustl.edu	37	7	44806211	44806211	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	44806211	44806211	G	-	DEL	ZMIZ2	ENST00000309315	human	ensembl	74_37	+1	known	frame_shift_del	c.2604	p.872fs	1.000	NULL	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ2	HGNC	ENSG00000122515				104	0	0	95	23	19.4915
DDC	0	genome.wustl.edu	37	7	50595863	50595864	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	50595863	50595864	TC	-	DEL	DDC	ENST00000357936	human	ensembl	74_37	-1	known	frame_shift_del	c.686_685	p.D229fs	1.000:1.000	pfam_PyrdxlP-dep_de-COase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase,prints_Aromatic_deC	-	no_errors	DDC	HGNC	ENSG00000132437				124	0	0	90	26	22.4138
ZNF716	0	genome.wustl.edu	37	7	57528542	57528542	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	57528542	57528542	A	-	DEL	ZNF716	ENST00000420713	human	ensembl	74_37	+1	known	frame_shift_del	c.375	p.K127fs	0.128	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF716	HGNC	ENSG00000182111				52	0	0	44	11	20
PMS2CL	0	genome.wustl.edu	37	7	6791127	6791127	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	6791127	6791127	A	-	DEL	PMS2CL	ENST00000486256	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	PMS2CL	HGNC	ENSG00000187953				26	0	0	19	6	24
POM121C	0	genome.wustl.edu	37	7	75070840	75070840	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	75070840	75070840	C	-	DEL	POM121C	ENST00000257665	human	ensembl	74_37	-1	known	frame_shift_del	c.661	p.V221fs	0.642	NULL	NULL	-	no_errors	POM121C	HGNC	ENSG00000135213				33	0	0	31	7	18.4211
UPK3B	0	genome.wustl.edu	37	7	76139983	76139983	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	76139983	76139983	G	-	DEL	UPK3B	ENST00000257632	human	ensembl	74_37	+1	known	frame_shift_del	c.14	p.Q7fs	0.000	NULL	NULL	-	no_errors	UPK3B	HGNC	ENSG00000243566				49	0	0	47	12	20.339
DTX2P1-UPK3BP1-PMS2P11	0	genome.wustl.edu	37	7	76610355	76610356	+	RNA	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	76610355	76610356	-	C	INS	DTX2P1-UPK3BP1-PMS2P11	ENST00000584900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.918:0.847	-	-	-	no_errors	DTX2P1-UPK3BP1-PMS2P11	HGNC	ENSG00000265479				229	2	0.865801	201	37	15.5462
PTPN12	0	genome.wustl.edu	37	7	77256685	77256686	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	77256685	77256686	-	A	INS	PTPN12	ENST00000248594	human	ensembl	74_37	+1	known	frame_shift_ins	c.1689_1690	p.T564fs	0.090:0.974	pirsf_Ptpn_12	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Ptpn_12,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN12	HGNC	ENSG00000127947				170	0	0	146	29	16.5714
SAMD9L	0	genome.wustl.edu	37	7	92761061	92761061	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	92761061	92761061	T	-	DEL	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	frame_shift_del	c.4224	p.K1408fs	0.665	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409				276	0	0	222	16	6.72269
TRRAP	0	genome.wustl.edu	37	7	98547123	98547123	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	7	98547123	98547123	G	-	DEL	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	frame_shift_del	c.4851	p.G1619fs	0.003	NULL	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367				97	0	0	81	16	16.4948
UBR5	0	genome.wustl.edu	37	8	103289349	103289349	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	103289349	103289349	T	-	DEL	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_del	c.6360	p.E2121fs	0.987	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				111	0	0	47	17	26.5625
KLF10	0	genome.wustl.edu	37	8	103663533	103663534	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	103663533	103663534	GA	-	DEL	KLF10	ENST00000285407	human	ensembl	74_37	-1	known	frame_shift_del	c.1027_1026	p.P343fs	1.000:0.996	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF10	HGNC	ENSG00000155090				150	0	0	65	19	22.619
KHDRBS3	0	genome.wustl.edu	37	8	136594256	136594256	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	136594256	136594256	C	-	DEL	KHDRBS3	ENST00000355849	human	ensembl	74_37	+1	known	frame_shift_del	c.747	p.P251fs	0.001	NULL	smart_KH_dom	-	no_errors	KHDRBS3	HGNC	ENSG00000131773				74	0	0	45	7	13.4615
AGO2	0	genome.wustl.edu	37	8	141554345	141554345	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	141554345	141554345	G	-	DEL	AGO2	ENST00000220592	human	ensembl	74_37	-1	known	frame_shift_del	c.1806	p.A603fs	0.203	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO2	HGNC	ENSG00000123908				289	2	0.687285	208	42	16.8
GRINA	0	genome.wustl.edu	37	8	145065457	145065457	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	145065457	145065457	G	-	DEL	GRINA	ENST00000313269	human	ensembl	74_37	+1	known	frame_shift_del	c.66	p.26fs	0.997	NULL	pfam_Bax_inhibitor_1-related	-	no_errors	GRINA	HGNC	ENSG00000178719				53	0	0	25	6	19.3548
ENSG00000204791	0	genome.wustl.edu	37	8	145106383	145106384	+	RNA	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	145106383	145106384	-	G	INS	ENSG00000204791	ENST00000528912	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	CTD-3065J16.6	Clone_based_vega_gene	ENSG00000204791				28	0	0	26	5	16.129
ZNF7	0	genome.wustl.edu	37	8	146067178	146067178	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	146067178	146067178	A	-	DEL	ZNF7	ENST00000325241	human	ensembl	74_37	+1	known	frame_shift_del	c.686	p.K231fs	0.004	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF7	HGNC	ENSG00000147789				97	0	0	81	32	28.3186
BMP1	0	genome.wustl.edu	37	8	22034447	22034447	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	22034447	22034447	C	-	DEL	BMP1	ENST00000518656	human	ensembl	74_37	+1	known	frame_shift_del	c.562	p.*190fs	1.000	NULL	pfam_Peptidase_M12A	-	no_errors	BMP1	HGNC	ENSG00000168487				22	0	0	10	3	23.0769
DOCK5	0	genome.wustl.edu	37	8	25240190	25240190	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	25240190	25240190	A	-	DEL	DOCK5	ENST00000276440	human	ensembl	74_37	+1	known	frame_shift_del	c.4027	p.R1345fs	1.000	NULL	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK5	HGNC	ENSG00000147459				13	0	0	3	6	66.6667
GOT1L1	0	genome.wustl.edu	37	8	37791834	37791834	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	37791834	37791834	T	-	DEL	GOT1L1	ENST00000307599	human	ensembl	74_37	-1	known	frame_shift_del	c.1243	p.T415fs	0.000	NULL	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,prints_Asp_trans	-	no_errors	GOT1L1	HGNC	ENSG00000169154				109	0	0	56	19	25.3333
MCM4	0	genome.wustl.edu	37	8	48883978	48883979	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	48883978	48883979	-	A	INS	MCM4	ENST00000262105	human	ensembl	74_37	+1	known	frame_shift_ins	c.1878_1879	p.T628fs	0.042:1.000	pfam_MCM_DNA-dep_ATPase,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738				65	0	0	42	9	17.6471
ST18	0	genome.wustl.edu	37	8	53055565	53055565	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	53055565	53055565	T	-	DEL	ST18	ENST00000276480	human	ensembl	74_37	-1	known	frame_shift_del	c.2093	p.K698fs	0.999	pfam_Myelin_TF	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488				89	0	0	49	9	15.5172
ARMC1	0	genome.wustl.edu	37	8	66517737	66517737	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	66517737	66517737	T	-	DEL	ARMC1	ENST00000276569	human	ensembl	74_37	-1	known	frame_shift_del	c.502	p.I168fs	1.000	superfamily_HeavyMe-assoc_HMA,pirsf_UCP013899_metal-bd	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_HeavyMe-assoc_HMA,pirsf_UCP013899_metal-bd	-	no_errors	ARMC1	HGNC	ENSG00000104442				54	0	0	30	4	11.7647
SULF1	0	genome.wustl.edu	37	8	70541813	70541815	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	70541813	70541815	AGG	-	DEL	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	in_frame_del	c.2183_2185	p.E729in_frame_del	1.000:1.000:1.000	superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				141	0	0	97	13	11.8182
KCNB2	0	genome.wustl.edu	37	8	73480092	73480092	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	73480092	73480092	G	-	DEL	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	frame_shift_del	c.123	p.G43fs	0.906	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv9	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				160	1	0.621118	110	29	20.8633
CA2	0	genome.wustl.edu	37	8	86386635	86386635	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	86386635	86386635	T	-	DEL	CA2	ENST00000285379	human	ensembl	74_37	+1	known	frame_shift_del	c.434	p.L147fs	0.362	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA2	HGNC	ENSG00000104267				150	0	0	97	28	22.4
OSGIN2	0	genome.wustl.edu	37	8	90937617	90937618	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	90937617	90937618	-	T	INS	OSGIN2	ENST00000451899	human	ensembl	74_37	+1	known	frame_shift_ins	c.1507_1508	p.A505fs	1.000:1.000	NULL	NULL	-	no_errors	OSGIN2	HGNC	ENSG00000164823				165	0	0	101	27	21.0938
NBN	0	genome.wustl.edu	37	8	90949256	90949256	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	90949256	90949256	A	-	DEL	NBN	ENST00000265433	human	ensembl	74_37	-1	known	frame_shift_del	c.2232	p.F744fs	1.000	pfam_DNA-repair_Nbs1_C,pirsf_Nibrin_met	pfam_DNA-repair_Nbs1_C,pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_BRCT_dom,smart_FHA_dom,pirsf_Nibrin_met,pfscan_FHA_dom	-	no_errors	NBN	HGNC	ENSG00000104320				62	0	0	19	4	17.3913
SLC26A7	0	genome.wustl.edu	37	8	92401630	92401631	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	8	92401630	92401631	-	T	INS	SLC26A7	ENST00000309536	human	ensembl	74_37	+1	known	frame_shift_ins	c.1740_1741	p.D582fs	1.000:1.000	pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A7	HGNC	ENSG00000147606				249	0	0	151	41	21.3542
INVS	0	genome.wustl.edu	37	9	103054983	103054983	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	103054983	103054983	G	-	DEL	INVS	ENST00000262457	human	ensembl	74_37	+1	known	frame_shift_del	c.2444	p.E817fs	0.977	NULL	pfam_Ankyrin_rpt,pfam_IQ_motif_EF-hand-BS,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_IQ_motif_EF-hand-BS,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Ankyrin_rpt	-	no_errors	INVS	HGNC	ENSG00000119509				118	0	0	64	14	17.9487
BAAT	0	genome.wustl.edu	37	9	104133686	104133686	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	104133686	104133686	T	-	DEL	BAAT	ENST00000259407	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	0.425	pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	BAAT	HGNC	ENSG00000136881				48	0	0	22	6	21.4286
ZNF462	0	genome.wustl.edu	37	9	109689491	109689491	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	109689491	109689491	C	-	DEL	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	frame_shift_del	c.3298	p.P1102fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				37	0	0	27	10	27.027
RGS3	0	genome.wustl.edu	37	9	116246504	116246506	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	116246504	116246506	CTT	-	DEL	RGS3	ENST00000350696	human	ensembl	74_37	+1	known	in_frame_del	c.612_614	p.F207in_frame_del	1.000:1.000:1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_RGS_dom,pfam_C2_dom,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_C2_dom,superfamily_PDZ,smart_C2_dom,smart_PDZ,smart_Regulat_G_prot_signal_superfam,pfscan_C2_dom,pfscan_PDZ,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835				91	0	0	58	11	15.942
SLC2A8	0	genome.wustl.edu	37	9	130166382	130166382	+	RNA	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	130166382	130166382	C	-	DEL	SLC2A8	ENST00000485806	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC2A8	HGNC	ENSG00000136856				33	0	0	20	4	16.6667
CIZ1	0	genome.wustl.edu	37	9	130943046	130943047	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	130943046	130943047	-	G	INS	CIZ1	ENST00000538431	human	ensembl	74_37	-1	known	frame_shift_ins	c.636_635	p.E213fs	0.895:0.920	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,pfscan_Znf_C2H2_matrin	-	no_errors	CIZ1	HGNC	ENSG00000148337				133	0	0	97	11	10.1852
MPDZ	0	genome.wustl.edu	37	9	13110660	13110660	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	13110660	13110660	T	-	DEL	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	frame_shift_del	c.5804	p.N1935fs	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186				39	0	0	22	6	21.4286
NUP188	0	genome.wustl.edu	37	9	131718643	131718643	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	131718643	131718643	A	-	DEL	NUP188	ENST00000372577	human	ensembl	74_37	+1	known	frame_shift_del	c.176	p.V61fs	1.000	pfam_Nucleoporin_Nup188	pfam_Nucleoporin_Nup188,superfamily_ARM-type_fold	-	no_errors	NUP188	HGNC	ENSG00000095319				32	0	0	17	5	22.7273
C9orf78	0	genome.wustl.edu	37	9	132596001	132596001	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	132596001	132596001	A	-	DEL	C9orf78	ENST00000461762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.115	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819				24	0	0	28	6	17.6471
DDX31	0	genome.wustl.edu	37	9	135537941	135537941	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	135537941	135537941	T	-	DEL	DDX31	ENST00000372159	human	ensembl	74_37	-1	known	frame_shift_del	c.532	p.M178fs	0.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX31	HGNC	ENSG00000125485				140	0	0	79	24	23.301
TRAF2	0	genome.wustl.edu	37	9	139820211	139820212	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	139820211	139820212	-	T	INS	TRAF2	ENST00000359662	human	ensembl	74_37	+1	known	frame_shift_ins	c.1520_1521	p.Q509fs	1.000:0.959	pfam_MATH,superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF2	HGNC	ENSG00000127191				116	0	0	64	29	31.1828
NOXA1	0	genome.wustl.edu	37	9	140325730	140325730	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	140325730	140325730	C	-	DEL	NOXA1	ENST00000341349	human	ensembl	74_37	+1	known	frame_shift_del	c.741	p.L249fs	0.001	NULL	pfam_OPR_PB1,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_TPR_repeat,smart_OPR_PB1,smart_SH3_domain,pfscan_SH3_domain,pfscan_TPR-contain_dom	-	no_errors	NOXA1	HGNC	ENSG00000188747				180	0	0	124	34	21.519
C9orf72	0	genome.wustl.edu	37	9	27548406	27548406	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	27548406	27548406	T	-	DEL	C9orf72	ENST00000380003	human	ensembl	74_37	-1	known	frame_shift_del	c.1274	p.K425fs	1.000	NULL	NULL	-	no_errors	C9orf72	HGNC	ENSG00000147894				64	0	0	23	2	8
NFX1	0	genome.wustl.edu	37	9	33294844	33294846	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	33294844	33294846	CTT	-	DEL	NFX1	ENST00000379540	human	ensembl	74_37	+1	known	in_frame_del	c.452_454	p.S152in_frame_del	1.000:1.000:1.000	NULL	pfam_Znf_NFX1,pfam_R3H_ss-bd,smart_Znf_RING,smart_Znf_NFX1,smart_R3H_ss-bd,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_R3H_ss-bd	-	no_errors	NFX1	HGNC	ENSG00000086102				155	0	0	85	32	27.3504
VCP	0	genome.wustl.edu	37	9	35059647	35059647	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	35059647	35059647	T	-	DEL	VCP	ENST00000358901	human	ensembl	74_37	-1	known	frame_shift_del	c.1847	p.N616fs	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	pfam_ATPase_AAA_core,pfam_CDC4_N-term_subdom,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Cdc48_dom2,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_Vps4_C,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	-	no_errors	VCP	HGNC	ENSG00000165280				139	0	0	85	24	22.0183
FAM214B	0	genome.wustl.edu	37	9	35108148	35108148	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	35108148	35108148	C	-	DEL	FAM214B	ENST00000322813	human	ensembl	74_37	-1	known	frame_shift_del	c.124	p.A42fs	0.584	NULL	NULL	-	no_errors	FAM214B	HGNC	ENSG00000005238				28	0	0	23	5	17.8571
TESK1	0	genome.wustl.edu	37	9	35607307	35607308	+	RNA	INS	-	-	TG			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	35607307	35607308	-	TG	INS	TESK1	ENST00000463897	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	TESK1	HGNC	ENSG00000107140				119	0	0	87	15	14.7059
RLN2	0	genome.wustl.edu	37	9	5304560	5304561	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	5304560	5304561	-	A	INS	RLN2	ENST00000381627	human	ensembl	74_37	-1	known	frame_shift_ins	c.21_20	p.H8fs	0.091:0.078	prints_Relaxin	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Relaxin,prints_Insulin_family	-	no_errors	RLN2	HGNC	ENSG00000107014				153	0	0	106	17	13.8211
ERMP1	0	genome.wustl.edu	37	9	5801292	5801292	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	5801292	5801292	T	-	DEL	ERMP1	ENST00000339450	human	ensembl	74_37	-1	known	frame_shift_del	c.1951	p.T651fs	0.994	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	ERMP1	HGNC	ENSG00000099219				67	0	0	32	11	25.5814
VPS13A	0	genome.wustl.edu	37	9	79984308	79984308	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	79984308	79984308	T	-	DEL	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	frame_shift_del	c.8647	p.Y2885fs	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				114	0	0	57	11	16.1765
TLE4	0	genome.wustl.edu	37	9	82335100	82335100	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	82335100	82335100	C	-	DEL	TLE4	ENST00000376520	human	ensembl	74_37	+1	known	frame_shift_del	c.1826	p.A611fs	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE4	HGNC	ENSG00000106829				103	0	0	73	19	20.6522
SPATA31D1	0	genome.wustl.edu	37	9	84606643	84606643	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	84606643	84606643	A	-	DEL	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	frame_shift_del	c.1258	p.R422fs	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929				59	0	0	33	8	19.5122
PHF2	0	genome.wustl.edu	37	9	96422612	96422612	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	9	96422612	96422612	A	-	DEL	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	frame_shift_del	c.1468	p.K492fs	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				24	0	0	8	3	27.2727
BTK	0	genome.wustl.edu	37	X	100609023	100609024	+	RNA	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	100609023	100609024	-	T	INS	BTK	ENST00000488970	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.144:0.154	-	-	-	no_errors	BTK	HGNC	ENSG00000010671				103	0	0	67	21	23.8636
FHL1	0	genome.wustl.edu	37	X	135289288	135289289	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	135289288	135289289	-	A	INS	FHL1	ENST00000345434	human	ensembl	74_37	+1	known	frame_shift_ins	c.270_271	p.C91fs	1.000:1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	FHL1	HGNC	ENSG00000022267				250	0	0	170	37	17.8744
AFF2	0	genome.wustl.edu	37	X	147733548	147733548	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	147733548	147733548	A	-	DEL	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	frame_shift_del	c.76	p.R28fs	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				295	2	0.673401	244	41	14.386
ENSG00000270726	0	genome.wustl.edu	37	X	155255057	155255058	+	RNA	INS	-	-	C			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	155255057	155255058	-	C	INS	ENSG00000270726	ENST00000285718	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.069:0.076	-	-	-	no_errors	AJ271736.10	Clone_based_vega_gene	ENSG00000270726				51	0	0	32	6	15.7895
MBTPS2	0	genome.wustl.edu	37	X	21887644	21887644	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	21887644	21887644	T	-	DEL	MBTPS2	ENST00000379484	human	ensembl	74_37	+1	known	frame_shift_del	c.818	p.F274fs	1.000	pfam_Peptidase_M50,superfamily_PDZ	pfam_Peptidase_M50,superfamily_PDZ,prints_MBTPS2	-	no_errors	MBTPS2	HGNC	ENSG00000012174				152	0	0	98	30	23.4375
DDX3X	0	genome.wustl.edu	37	X	41205517	41205517	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	41205517	41205517	A	-	DEL	DDX3X	ENST00000399959	human	ensembl	74_37	+1	known	frame_shift_del	c.1351	p.K452fs	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX3X	HGNC	ENSG00000215301				221	0	0	108	29	21.1679
MAGED1	0	genome.wustl.edu	37	X	51643311	51643311	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	51643311	51643311	C	-	DEL	MAGED1	ENST00000375695	human	ensembl	74_37	+1	known	frame_shift_del	c.2046	p.P684fs	1.000	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222				79	0	0	36	8	18.1818
HUWE1	0	genome.wustl.edu	37	X	53658442	53658442	+	RNA	DEL	A	A	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	53658442	53658442	A	-	DEL	HUWE1	ENST00000471676	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	HUWE1	HGNC	ENSG00000086758				57	0	0	13	20	60.6061
FGD1	0	genome.wustl.edu	37	X	54497113	54497114	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	54497113	54497114	-	T	INS	FGD1	ENST00000375135	human	ensembl	74_37	-1	known	frame_shift_ins	c.562_561	p.L187fs	0.997:0.664	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD1	HGNC	ENSG00000102302				33	0	0	23	5	17.8571
SNX12	0	genome.wustl.edu	37	X	70288194	70288194	+	RNA	DEL	G	G	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	70288194	70288194	G	-	DEL	SNX12	ENST00000465030	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.965	-	-	-	no_errors	SNX12	HGNC	ENSG00000147164				20	0	0	18	6	25
TAF1	0	genome.wustl.edu	37	X	70602999	70603000	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	70602999	70603000	-	A	INS	TAF1	ENST00000449580	human	ensembl	74_37	+1	known	frame_shift_ins	c.1929_1930	p.A646fs	1.000:1.000	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1	HGNC	ENSG00000147133				64	0	0	37	6	13.9535
CYSLTR1	0	genome.wustl.edu	37	X	77528587	77528587	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4GX-01A-12D-A25D-08	TCGA-HU-A4GX-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	fffb9288-14f9-4466-b7a2-7aa1743792ff	a82c8c45-753a-4815-83d7-c249a1638801	X	77528587	77528587	T	-	DEL	CYSLTR1	ENST00000373304	human	ensembl	74_37	-1	known	frame_shift_del	c.657	p.K219fs	0.005	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_CLT1_recept,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_Cyst_leuk_rcpt,prints_CLT1_recept,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	CYSLTR1	HGNC	ENSG00000173198				46	0	0	23	6	20.6897
