Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
UBE4B	0	genome.wustl.edu	37	1	10155592	10155592	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	10155592	10155592	G	A	SNP	UBE4B	ENST00000343090	human	ensembl	74_37	+1	known	silent	c.285	p.T95	0.006	NULL	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4B	HGNC	ENSG00000130939				81	0	0	41	14	25.4545
KIF1B	0	genome.wustl.edu	37	1	10384888	10384888	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	10384888	10384888	C	T	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	silent	c.2472	p.S824	0.000	pfam_KIF1B	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				137	0	0	84	35	29.4118
KIF1B	0	genome.wustl.edu	37	1	10399859	10399859	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	10399859	10399859	C	T	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	missense	c.3317	p.T1106M	1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				36	0	0	24	13	35.1351
KIAA1324	0	genome.wustl.edu	37	1	109741246	109741246	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	109741246	109741246	C	T	SNP	KIAA1324	ENST00000369939	human	ensembl	74_37	+1	known	silent	c.2451	p.R817	0.002	superfamily_Man6P_isomerase_rcpt-bd_dom	superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Growth_fac_rcpt_N_dom	-	no_errors	KIAA1324	HGNC	ENSG00000116299				32	0	0	11	10	47.619
EPS8L3	0	genome.wustl.edu	37	1	110301862	110301862	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	110301862	110301862	C	A	SNP	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	missense	c.403	p.G135W	0.989	pfam_PTB	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758				173	0	0	97	51	34.4595
AHCYL1	0	genome.wustl.edu	37	1	110551702	110551702	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	110551702	110551702	C	T	SNP	AHCYL1	ENST00000369799	human	ensembl	74_37	+1	known	missense	c.167	p.T56I	1.000	NULL	pfam_Adenosylhomocysteinase,pfam_Ado_hCys_hydrolase_NAD-bd,pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_IlvN,pirsf_Adenosylhomocysteinase,tigrfam_Adenosylhomocysteinase	-	no_errors	AHCYL1	HGNC	ENSG00000168710				91	0	0	39	17	30.3571
KCNC4	0	genome.wustl.edu	37	1	110754325	110754325	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	110754325	110754325	C	T	SNP	KCNC4	ENST00000369787	human	ensembl	74_37	+1	known	silent	c.204	p.P68	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv3.4	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_K_chnl_volt-dep_Kv3_ID,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.4,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC4	HGNC	ENSG00000116396				38	0	0	16	6	27.2727
DRAXIN	0	genome.wustl.edu	37	1	11769435	11769435	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	11769435	11769435	G	A	SNP	DRAXIN	ENST00000294485	human	ensembl	74_37	+1	known	silent	c.555	p.A185	0.999	NULL	NULL	-	no_errors	DRAXIN	HGNC	ENSG00000162490				30	0	0	23	12	34.2857
OTUD7B	0	genome.wustl.edu	37	1	149916658	149916658	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	149916658	149916658	C	T	SNP	OTUD7B	ENST00000369135	human	ensembl	74_37	-1	known	missense	c.1630	p.G544S	1.000	NULL	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7B	HGNC	ENSG00000163113				146	0	0	90	56	38.3562
PSMB4	0	genome.wustl.edu	37	1	151373273	151373273	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	151373273	151373273	C	T	SNP	PSMB4	ENST00000290541	human	ensembl	74_37	+1	known	silent	c.528	p.A176	0.981	pfam_Proteasome_sua/b,pirsf_Proteasome_endopept_cplx_B	pfam_Proteasome_sua/b,pirsf_Proteasome_endopept_cplx_B	-	no_errors	PSMB4	HGNC	ENSG00000159377				293	1	0.340136	155	69	30.8036
INTS3	0	genome.wustl.edu	37	1	153740271	153740271	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	153740271	153740271	C	A	SNP	INTS3	ENST00000318967	human	ensembl	74_37	+1	known	missense	c.2212	p.L738M	1.000	NULL	pfam_Int_cplx_su3	-	no_errors	INTS3	HGNC	ENSG00000143624				89	0	0	44	30	40.5405
GATAD2B	0	genome.wustl.edu	37	1	153785764	153785764	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	153785764	153785764	G	A	SNP	GATAD2B	ENST00000368655	human	ensembl	74_37	-1	known	silent	c.1381	p.L461	1.000	NULL	pfam_Znf_GATA,pfscan_Znf_GATA	-	no_errors	GATAD2B	HGNC	ENSG00000143614				132	0	0	80	13	13.9785
ASH1L	0	genome.wustl.edu	37	1	155340428	155340428	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	155340428	155340428	C	G	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.6568	p.E2190Q	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				58	0	0	68	6	8.10811
MSTO1	0	genome.wustl.edu	37	1	155716601	155716601	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	155716601	155716601	C	A	SNP	MSTO1	ENST00000538143	human	ensembl	74_37	+1	known	missense	c.305	p.T102N	1.000	pfam_Misato_II_tubulin-like	pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase	-	no_errors	MSTO1	HGNC	ENSG00000125459				37	0	0	23	4	14.8148
GON4L	0	genome.wustl.edu	37	1	155735282	155735282	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	155735282	155735282	C	T	SNP	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	missense	c.3982	p.E1328K	0.989	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580				89	0	0	58	26	30.9524
PRCC	0	genome.wustl.edu	37	1	156756452	156756452	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	156756452	156756452	T	C	SNP	PRCC	ENST00000271526	human	ensembl	74_37	+1	known	missense	c.569	p.L190P	1.000	NULL	pfam_PRCC	-	no_errors	PRCC	HGNC	ENSG00000143294				99	0	0	61	34	35.7895
PEAR1	0	genome.wustl.edu	37	1	156877817	156877817	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	156877817	156877817	C	T	SNP	PEAR1	ENST00000292357	human	ensembl	74_37	+1	known	silent	c.876	p.R292	1.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom	pfam_EGF_laminin,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	PEAR1	HGNC	ENSG00000187800				13	0	0	4	3	42.8571
FCRL4	0	genome.wustl.edu	37	1	157550197	157550197	+	RNA	SNP	T	T	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	157550197	157550197	T	A	SNP	FCRL4	ENST00000479869	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.025	-	-	-	no_errors	FCRL4	HGNC	ENSG00000163518				37	0	0	31	19	38
CD1E	0	genome.wustl.edu	37	1	158325917	158325917	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	158325917	158325917	G	A	SNP	CD1E	ENST00000434258	human	ensembl	74_37	+1	known	missense	c.920	p.C307Y	0.000	NULL	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1E	HGNC	ENSG00000158488				47	0	0	30	10	25
SPTA1	0	genome.wustl.edu	37	1	158639341	158639341	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	158639341	158639341	G	A	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.1690	p.R564W	0.780	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				171	0	0	114	43	27.3885
RSG1	0	genome.wustl.edu	37	1	16558758	16558758	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	16558758	16558758	G	A	SNP	RSG1	ENST00000375599	human	ensembl	74_37	-1	known	missense	c.562	p.R188W	1.000	pfam_Small_GTPase,superfamily_P-loop_NTPase	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,prints_Small_GTPase	-	no_errors	RSG1	HGNC	ENSG00000132881				24	0	0	16	7	30.4348
DUSP27	0	genome.wustl.edu	37	1	167096269	167096269	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	167096269	167096269	G	A	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	missense	c.1901	p.R634Q	0.999	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842				30	0	0	18	12	40
ADCY10	0	genome.wustl.edu	37	1	167778932	167778932	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	167778932	167778932	C	T	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	missense	c.4816	p.V1606M	0.010	pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199				104	0	0	60	21	25.9259
SLC9C2	0	genome.wustl.edu	37	1	173516835	173516835	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	173516835	173516835	A	G	SNP	SLC9C2	ENST00000367714	human	ensembl	74_37	-1	known	missense	c.1550	p.I517T	1.000	NULL	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C2	HGNC	ENSG00000162753				74	0	0	35	15	30
PAPPA2	0	genome.wustl.edu	37	1	176762727	176762727	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	176762727	176762727	C	T	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	silent	c.5052	p.P1684	0.991	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183				101	0	0	29	14	32.5581
ASTN1	0	genome.wustl.edu	37	1	177133715	177133715	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	177133715	177133715	A	G	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	missense	c.98	p.L33P	1.000	NULL	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092				32	0	0	12	10	45.4545
ASPM	0	genome.wustl.edu	37	1	197069737	197069737	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	197069737	197069737	A	G	SNP	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	missense	c.8644	p.Y2882H	0.000	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279				50	0	0	34	7	17.0732
DDX59	0	genome.wustl.edu	37	1	200635327	200635327	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	200635327	200635327	T	G	SNP	DDX59	ENST00000331314	human	ensembl	74_37	-1	known	missense	c.542	p.Q181P	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197				126	0	0	56	50	47.1698
PKP1	0	genome.wustl.edu	37	1	201252870	201252870	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	201252870	201252870	T	C	SNP	PKP1	ENST00000263946	human	ensembl	74_37	+1	known	missense	c.40	p.C14R	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP1	HGNC	ENSG00000081277				39	0	0	28	16	36.3636
NFASC	0	genome.wustl.edu	37	1	204956505	204956505	+	RNA	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	204956505	204956505	C	A	SNP	NFASC	ENST00000495396	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	NFASC	HGNC	ENSG00000163531				10	0	0	9	5	35.7143
TMCC2	0	genome.wustl.edu	37	1	205238321	205238321	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	205238321	205238321	C	T	SNP	TMCC2	ENST00000358024	human	ensembl	74_37	+1	known	missense	c.991	p.R331C	0.996	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2,superfamily_t-SNARE	-	no_errors	TMCC2	HGNC	ENSG00000133069				64	0	0	35	20	36.3636
CR1	0	genome.wustl.edu	37	1	207787831	207787831	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	207787831	207787831	G	T	SNP	CR1	ENST00000367049	human	ensembl	74_37	+1	known	nonsense	c.6658	p.E2220*	1.000	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710				58	0	0	45	4	8.16327
LAMB3	0	genome.wustl.edu	37	1	209807792	209807792	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	209807792	209807792	C	G	SNP	LAMB3	ENST00000356082	human	ensembl	74_37	-1	known	missense	c.564	p.K188N	1.000	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878				77	0	0	39	12	23.5294
USH2A	0	genome.wustl.edu	37	1	215848449	215848449	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	215848449	215848449	T	C	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	silent	c.12804	p.P4268	0.053	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				46	0	0	43	20	31.746
SKI	0	genome.wustl.edu	37	1	2235330	2235330	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	2235330	2235330	C	T	SNP	SKI	ENST00000378536	human	ensembl	74_37	+1	known	silent	c.1263	p.L421	0.040	NULL	pfam_c-SKI_SMAD4-bd_dom,pfam_Transform_Ski,superfamily_SAND_dom-like,superfamily_DNA-bd_dom_put	-	no_errors	SKI	HGNC	ENSG00000157933				29	0	0	11	7	38.8889
LBR	0	genome.wustl.edu	37	1	225591060	225591060	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	225591060	225591060	G	A	SNP	LBR	ENST00000272163	human	ensembl	74_37	-1	known	missense	c.1793	p.A598V	0.998	pfam_Ergosterol_biosynth_ERG4_ERG24,pfam_DUF1295	pfam_Ergosterol_biosynth_ERG4_ERG24,pfam_Lamin-B_rcpt_of_tudor,pfam_DUF1295,smart_Tudor	-	no_errors	LBR	HGNC	ENSG00000143815				104	0	0	53	34	39.0805
ADCK3	0	genome.wustl.edu	37	1	227171866	227171866	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	227171866	227171866	T	C	SNP	ADCK3	ENST00000366777	human	ensembl	74_37	+1	known	missense	c.1328	p.L443P	1.000	superfamily_Kinase-like_dom	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK3	HGNC	ENSG00000163050				48	0	0	25	18	41.8605
GJC2	0	genome.wustl.edu	37	1	228346746	228346746	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	228346746	228346746	C	T	SNP	GJC2	ENST00000366714	human	ensembl	74_37	+1	known	silent	c.1287	p.S429	0.977	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJC2	HGNC	ENSG00000198835				59	0	0	25	14	35.8974
OBSCN	0	genome.wustl.edu	37	1	228464704	228464704	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	228464704	228464704	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	silent	c.6561	p.C2187	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				9	0	0	5	4	44.4444
OBSCN	0	genome.wustl.edu	37	1	228560646	228560646	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	228560646	228560646	G	C	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.22167	p.W7389C	0.083	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				44	0	0	18	5	21.7391
C1QB	0	genome.wustl.edu	37	1	22987798	22987798	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	22987798	22987798	C	T	SNP	C1QB	ENST00000314933	human	ensembl	74_37	+1	known	silent	c.681	p.T227	0.001	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QB	HGNC	ENSG00000173369				108	0	0	63	18	22.2222
PCNXL2	0	genome.wustl.edu	37	1	233120211	233120211	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	233120211	233120211	G	A	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	missense	c.6253	p.P2085S	0.967	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				110	0	0	42	14	25
KIAA1804	0	genome.wustl.edu	37	1	233514948	233514948	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	233514948	233514948	G	T	SNP	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	silent	c.2196	p.S732	0.000	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674				93	0	0	58	29	33.3333
SLC35F3	0	genome.wustl.edu	37	1	234367306	234367306	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	234367306	234367306	C	T	SNP	SLC35F3	ENST00000366617	human	ensembl	74_37	+1	known	silent	c.220	p.L74	0.999	NULL	pfam_DMT,pfam_Tpt_PEP_trans_dom,pfam_SLC35_F1/F2/F6	-	no_errors	SLC35F3	HGNC	ENSG00000183780				159	0	0	154	9	5.52147
ACTN2	0	genome.wustl.edu	37	1	236925859	236925859	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	236925859	236925859	G	A	SNP	ACTN2	ENST00000366578	human	ensembl	74_37	+1	known	silent	c.2625	p.V875	0.998	pfam_EF-hand_Ca_insen	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN2	HGNC	ENSG00000077522				43	0	0	23	8	25.8065
DESI2	0	genome.wustl.edu	37	1	244855310	244855310	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	244855310	244855310	A	G	SNP	DESI2	ENST00000302550	human	ensembl	74_37	+1	novel	silent	c.339	p.S113	1.000	pfam_PPPDE_dom	pfam_PPPDE_dom	-	no_errors	DESI2	HGNC	ENSG00000121644				55	0	0	28	14	33.3333
CNST	0	genome.wustl.edu	37	1	246810999	246810999	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	246810999	246810999	C	T	SNP	CNST	ENST00000366513	human	ensembl	74_37	+1	known	missense	c.1496	p.A499V	0.001	NULL	NULL	-	no_errors	CNST	HGNC	ENSG00000162852				105	0	0	56	22	28.2051
AHCTF1	0	genome.wustl.edu	37	1	247025328	247025328	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	247025328	247025328	G	A	SNP	AHCTF1	ENST00000326225	human	ensembl	74_37	-1	known	missense	c.3695	p.P1232L	0.994	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	AHCTF1	HGNC	ENSG00000153207				38	0	0	30	11	26.8293
TRIM58	0	genome.wustl.edu	37	1	248028188	248028188	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	248028188	248028188	C	T	SNP	TRIM58	ENST00000366481	human	ensembl	74_37	+1	known	missense	c.698	p.A233V	0.658	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM58	HGNC	ENSG00000162722				16	0	0	5	7	58.3333
OR2T8	0	genome.wustl.edu	37	1	248084594	248084594	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	248084594	248084594	G	A	SNP	OR2T8	ENST00000319968	human	ensembl	74_37	+1	known	missense	c.275	p.R92H	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T8	HGNC	ENSG00000177462				32	0	0	28	20	41.6667
OR2T33	0	genome.wustl.edu	37	1	248436842	248436842	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	248436842	248436842	C	T	SNP	OR2T33	ENST00000318021	human	ensembl	74_37	-1	known	missense	c.275	p.R92H	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T33	HGNC	ENSG00000177212				113	0	0	87	29	25
MMEL1	0	genome.wustl.edu	37	1	2523063	2523063	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	2523063	2523063	C	T	SNP	MMEL1	ENST00000378412	human	ensembl	74_37	-1	known	missense	c.2173	p.G725R	0.992	pfam_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MMEL1	HGNC	ENSG00000142606				154	0	0	83	42	33.6
NR0B2	0	genome.wustl.edu	37	1	27238397	27238397	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	27238397	27238397	C	T	SNP	NR0B2	ENST00000254227	human	ensembl	74_37	-1	known	missense	c.713	p.R238H	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	-	no_errors	NR0B2	HGNC	ENSG00000131910				162	0	0	85	24	22.0183
WASF2	0	genome.wustl.edu	37	1	27736343	27736343	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	27736343	27736343	G	A	SNP	WASF2	ENST00000430629	human	ensembl	74_37	-1	known	silent	c.1182	p.P394	0.212	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF2	HGNC	ENSG00000158195				52	0	0	29	19	39.5833
RCC1	0	genome.wustl.edu	37	1	28862888	28862888	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	28862888	28862888	C	T	SNP	RCC1	ENST00000373831	human	ensembl	74_37	+1	known	missense	c.1025	p.S342L	1.000	superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RCC1	HGNC	ENSG00000180198				134	0	0	97	40	29.1971
IQCC	0	genome.wustl.edu	37	1	32672879	32672879	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	32672879	32672879	G	A	SNP	IQCC	ENST00000537469	human	ensembl	74_37	+1	known	silent	c.837	p.A279	0.000	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCC	HGNC	ENSG00000160051				148	0	0	86	33	27.7311
AGO4	0	genome.wustl.edu	37	1	36288485	36288485	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	36288485	36288485	C	T	SNP	AGO4	ENST00000373210	human	ensembl	74_37	+1	known	missense	c.208	p.R70W	1.000	superfamily_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO4	HGNC	ENSG00000134698				74	0	0	33	19	36.5385
STK40	0	genome.wustl.edu	37	1	36809855	36809855	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	36809855	36809855	G	A	SNP	STK40	ENST00000373130	human	ensembl	74_37	-1	known	silent	c.765	p.Y255	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK40	HGNC	ENSG00000196182				92	0	0	54	28	34.1463
INPP5B	0	genome.wustl.edu	37	1	38411462	38411462	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	38411462	38411462	G	A	SNP	INPP5B	ENST00000373023	human	ensembl	74_37	-1	known	missense	c.118	p.R40C	0.996	NULL	pfam_Endo/exonuclease/phosphatase,pfam_RhoGAP_dom,superfamily_Endo/exonuclease/phosphatase,superfamily_Rho_GTPase_activation_prot,smart_IPPc,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	INPP5B	HGNC	ENSG00000204084				104	0	0	65	39	37.5
BMP8A	0	genome.wustl.edu	37	1	39988086	39988086	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	39988086	39988086	G	A	SNP	BMP8A	ENST00000331593	human	ensembl	74_37	+1	known	missense	c.880	p.G294S	0.411	NULL	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP8A	HGNC	ENSG00000183682				157	0	0	84	19	18.4466
ENSG00000228192	0	genome.wustl.edu	37	1	43302784	43302784	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	43302784	43302784	A	G	SNP	ENSG00000228192	ENST00000416809	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-342M1.3	Clone_based_vega_gene	ENSG00000228192				53	0	0	26	16	38.0952
CCDC17	0	genome.wustl.edu	37	1	46086576	46086576	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	46086576	46086576	T	C	SNP	CCDC17	ENST00000343901	human	ensembl	74_37	-1	known	missense	c.1502	p.Q501R	1.000	NULL	NULL	-	no_errors	CCDC17	HGNC	ENSG00000159588				22	0	0	12	9	42.8571
MAST2	0	genome.wustl.edu	37	1	46498028	46498028	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	46498028	46498028	C	T	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	silent	c.3366	p.R1122	0.101	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015				65	0	0	38	20	34.4828
LURAP1	0	genome.wustl.edu	37	1	46685377	46685377	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	46685377	46685377	C	A	SNP	LURAP1	ENST00000371980	human	ensembl	74_37	+1	known	missense	c.205	p.L69M	1.000	NULL	NULL	-	no_errors	LURAP1	HGNC	ENSG00000171357				116	0	0	72	24	25
CYP4B1	0	genome.wustl.edu	37	1	47280902	47280902	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	47280902	47280902	C	T	SNP	CYP4B1	ENST00000371923	human	ensembl	74_37	+1	known	missense	c.1039	p.R347C	0.033	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4B1	HGNC	ENSG00000142973				69	0	0	30	7	18.9189
RAB3B	0	genome.wustl.edu	37	1	52385787	52385787	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	52385787	52385787	C	A	SNP	RAB3B	ENST00000371655	human	ensembl	74_37	-1	known	splice_site	c.473-1	e4-1	1.000	-	-	-	no_errors	RAB3B	HGNC	ENSG00000169213				35	0	0	29	8	21.6216
FAM151A	0	genome.wustl.edu	37	1	55075225	55075225	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	55075225	55075225	G	A	SNP	FAM151A	ENST00000302250	human	ensembl	74_37	-1	known	nonsense	c.1474	p.Q492*	0.807	pfam_DUF2181	pfam_DUF2181	-	no_errors	FAM151A	HGNC	ENSG00000162391				106	0	0	65	37	36.2745
PLEKHG5	0	genome.wustl.edu	37	1	6533171	6533171	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	6533171	6533171	T	C	SNP	PLEKHG5	ENST00000537245	human	ensembl	74_37	-1	known	missense	c.1096	p.R366G	0.984	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG5	HGNC	ENSG00000171680				70	0	0	25	21	45.6522
LEPR	0	genome.wustl.edu	37	1	66102677	66102677	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	66102677	66102677	G	T	SNP	LEPR	ENST00000349533	human	ensembl	74_37	+1	known	missense	c.3477	p.K1159N	0.997	NULL	pfam_IgC2-like_lig-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LEPR	HGNC	ENSG00000116678				78	0	0	48	17	26.1538
TAS1R1	0	genome.wustl.edu	37	1	6636499	6636499	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	6636499	6636499	C	T	SNP	TAS1R1	ENST00000333172	human	ensembl	74_37	+1	known	missense	c.1285	p.H429Y	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	TAS1R1	HGNC	ENSG00000173662				199	0	0	116	35	23.1788
DIRAS3	0	genome.wustl.edu	37	1	68512858	68512858	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	68512858	68512858	C	A	SNP	DIRAS3	ENST00000370981	human	ensembl	74_37	-1	known	silent	c.123	p.V41	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS3	HGNC	ENSG00000162595				139	0	0	82	39	32.2314
FUBP1	0	genome.wustl.edu	37	1	78414859	78414859	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	78414859	78414859	T	G	SNP	FUBP1	ENST00000436586	human	ensembl	74_37	-1	known	missense	c.1970	p.Q657P	1.000	NULL	pfam_KH_dom_type_1,pfam_KH_dom_type_2,pfam_DUF1897,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FUBP1	HGNC	ENSG00000162613				136	0	0	83	29	25.8929
RERE	0	genome.wustl.edu	37	1	8415661	8415661	+	Splice_Site	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	8415661	8415661	T	G	SNP	RERE	ENST00000337907	human	ensembl	74_37	-1	known	splice_site	c.4487-2	e21-2	1.000	-	-	-	no_errors	RERE	HGNC	ENSG00000142599				25	0	0	14	5	26.3158
LPAR3	0	genome.wustl.edu	37	1	85331255	85331255	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	85331255	85331255	G	A	SNP	LPAR3	ENST00000370611	human	ensembl	74_37	-1	known	silent	c.549	p.Y183	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_LPA_rcpt_EDG7,prints_GPCR_Rhodpsn,prints_LPA_rcpt,prints_LPA_rcpt_EDG2,prints_Melcrt_ACTH_rcpt	-	no_errors	LPAR3	HGNC	ENSG00000171517				80	0	0	58	27	31.7647
GBP6	0	genome.wustl.edu	37	1	89844152	89844152	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	89844152	89844152	A	G	SNP	GBP6	ENST00000370456	human	ensembl	74_37	+1	known	missense	c.605	p.N202S	1.000	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP6	HGNC	ENSG00000183347				81	0	0	36	20	35.7143
LRRC8D	0	genome.wustl.edu	37	1	90399416	90399416	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	90399416	90399416	T	C	SNP	LRRC8D	ENST00000337338	human	ensembl	74_37	+1	known	silent	c.789	p.A263	0.038	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8D	HGNC	ENSG00000171492				30	0	0	27	4	12.9032
SLC2A7	0	genome.wustl.edu	37	1	9067418	9067418	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	9067418	9067418	G	T	SNP	SLC2A7	ENST00000400906	human	ensembl	74_37	-1	known	silent	c.1143	p.L381	0.983	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A7	HGNC	ENSG00000197241				55	0	0	28	15	34.8837
SEC31B	0	genome.wustl.edu	37	10	102265915	102265915	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	102265915	102265915	A	G	SNP	SEC31B	ENST00000370345	human	ensembl	74_37	-1	known	missense	c.926	p.V309A	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31B	HGNC	ENSG00000075826				116	0	0	58	45	43.6893
DPCD	0	genome.wustl.edu	37	10	103360978	103360978	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	103360978	103360978	G	A	SNP	DPCD	ENST00000370151	human	ensembl	74_37	+1	known	missense	c.289	p.D97N	1.000	NULL	NULL	-	no_errors	DPCD	HGNC	ENSG00000166171				106	0	0	64	31	32.6316
FBXL15	0	genome.wustl.edu	37	10	104181683	104181683	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	104181683	104181683	T	C	SNP	FBXL15	ENST00000224862	human	ensembl	74_37	+1	known	missense	c.347	p.L116P	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_F-box_dom,superfamily_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	FBXL15	HGNC	ENSG00000107872				30	0	0	15	3	16.6667
TAF5	0	genome.wustl.edu	37	10	105138238	105138238	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	105138238	105138238	T	C	SNP	TAF5	ENST00000369839	human	ensembl	74_37	+1	known	silent	c.1044	p.S348	1.000	NULL	pfam_WD40_repeat,pfam_TFIID-su_WD40-assoc_reg,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TAF5	HGNC	ENSG00000148835				39	0	0	47	7	12.963
WDR96	0	genome.wustl.edu	37	10	105953694	105953694	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	105953694	105953694	C	T	SNP	WDR96	ENST00000357060	human	ensembl	74_37	-1	known	missense	c.1372	p.V458I	0.000	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu	-	no_errors	WDR96	HGNC	ENSG00000197748				104	0	0	48	36	42.8571
SORCS1	0	genome.wustl.edu	37	10	108923879	108923879	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	108923879	108923879	C	A	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.406	p.G136W	1.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018				98	0	0	84	20	19.2308
XPNPEP1	0	genome.wustl.edu	37	10	111637539	111637539	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	111637539	111637539	A	G	SNP	XPNPEP1	ENST00000460055	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	XPNPEP1	HGNC	ENSG00000108039				110	0	0	56	20	26.3158
FAM160B1	0	genome.wustl.edu	37	10	116603660	116603660	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	116603660	116603660	C	T	SNP	FAM160B1	ENST00000369248	human	ensembl	74_37	+1	known	missense	c.977	p.P326L	1.000	pfam_RetinoicA-induced_16-like	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160B1	HGNC	ENSG00000151553				124	0	0	65	20	23.5294
HSPA12A	0	genome.wustl.edu	37	10	118440716	118440716	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	118440716	118440716	A	C	SNP	HSPA12A	ENST00000369209	human	ensembl	74_37	-1	known	missense	c.974	p.V325G	1.000	NULL	NULL	-	no_errors	HSPA12A	HGNC	ENSG00000165868				102	0	0	40	17	29.8246
PTPRE	0	genome.wustl.edu	37	10	129847931	129847931	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	129847931	129847931	G	A	SNP	PTPRE	ENST00000254667	human	ensembl	74_37	+1	known	splice_site	c.420+1	e4+1	1.000	-	-	-	no_errors	PTPRE	HGNC	ENSG00000132334				69	0	0	21	19	47.5
PRPF18	0	genome.wustl.edu	37	10	13639491	13639491	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	13639491	13639491	G	A	SNP	PRPF18	ENST00000378572	human	ensembl	74_37	+1	known	missense	c.100	p.A34T	0.993	NULL	pfam_Prp18,pfam_PRP4-like,superfamily_Prp18,smart_SFM	-	no_errors	PRPF18	HGNC	ENSG00000165630				28	0	0	22	3	12
FAM107B	0	genome.wustl.edu	37	10	14816397	14816397	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	14816397	14816397	G	A	SNP	FAM107B	ENST00000181796	human	ensembl	74_37	-1	known	missense	c.266	p.A89V	0.002	NULL	pfam_DUF1151	-	no_errors	FAM107B	HGNC	ENSG00000065809				228	0	0	136	74	35.2381
TRDMT1	0	genome.wustl.edu	37	10	17201173	17201173	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	17201173	17201173	T	C	SNP	TRDMT1	ENST00000377799	human	ensembl	74_37	-1	known	missense	c.515	p.E172G	0.793	pfam_C5_MeTfrase,tigrfam_C5_MeTfrase	pfam_C5_MeTfrase,prints_C5_MeTfrase,tigrfam_C5_MeTfrase	-	no_errors	TRDMT1	HGNC	ENSG00000107614				97	0	0	52	20	27.7778
ENKUR	0	genome.wustl.edu	37	10	25273749	25273749	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	25273749	25273749	T	C	SNP	ENKUR	ENST00000331161	human	ensembl	74_37	-1	known	missense	c.680	p.K227R	1.000	NULL	NULL	-	no_errors	ENKUR	HGNC	ENSG00000151023				67	0	0	34	17	33.3333
ARMC4	0	genome.wustl.edu	37	10	28233746	28233746	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	28233746	28233746	T	C	SNP	ARMC4	ENST00000305242	human	ensembl	74_37	-1	known	missense	c.1532	p.K511R	1.000	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_GSKIP_dom,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC4	HGNC	ENSG00000169126				122	0	0	73	32	30.4762
LYZL1	0	genome.wustl.edu	37	10	29599965	29599965	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	29599965	29599965	A	G	SNP	LYZL1	ENST00000375500	human	ensembl	74_37	+1	known	missense	c.562	p.K188E	1.000	pfam_Glyco_hydro_22,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22_lys	pfam_Glyco_hydro_22,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22,prints_Glyco_hydro_22_lys	-	no_errors	LYZL1	HGNC	ENSG00000120563				232	0	0	95	47	33.0986
SVIL	0	genome.wustl.edu	37	10	29747513	29747513	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	29747513	29747513	C	T	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	silent	c.6408	p.T2136	0.031	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				104	0	0	50	36	41.8605
SVIL	0	genome.wustl.edu	37	10	29813557	29813557	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	29813557	29813557	G	A	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	silent	c.2430	p.S810	0.986	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				183	0	0	84	52	38.2353
ZEB1	0	genome.wustl.edu	37	10	31809766	31809766	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	31809766	31809766	C	T	SNP	ZEB1	ENST00000361642	human	ensembl	74_37	+1	known	silent	c.1506	p.N502	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB1	HGNC	ENSG00000148516				90	0	0	46	27	36.9863
ZEB1	0	genome.wustl.edu	37	10	31815922	31815922	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	31815922	31815922	C	T	SNP	ZEB1	ENST00000361642	human	ensembl	74_37	+1	known	silent	c.3108	p.D1036	0.877	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB1	HGNC	ENSG00000148516				12	0	0	14	8	36.3636
PARD3	0	genome.wustl.edu	37	10	34626308	34626308	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	34626308	34626308	C	A	SNP	PARD3	ENST00000374789	human	ensembl	74_37	-1	known	nonsense	c.2464	p.G822*	1.000	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3	HGNC	ENSG00000148498				56	0	0	27	17	38.6364
KLF6	0	genome.wustl.edu	37	10	3824017	3824017	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	3824017	3824017	G	A	SNP	KLF6	ENST00000497571	human	ensembl	74_37	-1	known	silent	c.492	p.C164	0.925	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF6	HGNC	ENSG00000067082				121	0	0	81	13	13.8298
GDF10	0	genome.wustl.edu	37	10	48438501	48438501	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	48438501	48438501	G	A	SNP	GDF10	ENST00000224605	human	ensembl	74_37	-1	known	silent	c.210	p.S70	0.255	pirsf_BMP3/GDF10	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,pirsf_BMP3/GDF10	-	no_errors	GDF10	HGNC	ENSG00000107623				9	0	0	9	3	25
AKR1C1	0	genome.wustl.edu	37	10	5010361	5010361	+	RNA	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	5010361	5010361	T	C	SNP	AKR1C1	ENST00000477661	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AKR1C1	HGNC	ENSG00000187134				13	0	0	9	7	43.75
AGAP7	0	genome.wustl.edu	37	10	51465445	51465445	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	51465445	51465445	G	A	SNP	AGAP7	ENST00000374095	human	ensembl	74_37	-1	known	silent	c.1011	p.S337	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGAP7	HGNC	ENSG00000204169				172	0	0	148	31	17.3184
SGMS1	0	genome.wustl.edu	37	10	52067830	52067830	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	52067830	52067830	G	A	SNP	SGMS1	ENST00000361781	human	ensembl	74_37	-1	known	missense	c.974	p.A325V	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,pfam_SAM_type1,superfamily_SAM/pointed,superfamily_P_Acid_Pase_2/haloperoxidase,pfscan_SAM	-	no_errors	SGMS1	HGNC	ENSG00000198964				98	0	0	51	34	40
FAM208B	0	genome.wustl.edu	37	10	5769037	5769037	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	5769037	5769037	G	A	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	silent	c.438	p.K146	0.000	pfam_DUF3699	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021				125	0	0	58	26	30.9524
ZNF365	0	genome.wustl.edu	37	10	64159485	64159485	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	64159485	64159485	C	T	SNP	ZNF365	ENST00000395254	human	ensembl	74_37	+1	known	silent	c.1161	p.R387	0.991	NULL	NULL	-	no_errors	ZNF365	HGNC	ENSG00000138311				76	0	0	47	24	33.8028
AIFM2	0	genome.wustl.edu	37	10	71874701	71874701	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	71874701	71874701	C	T	SNP	AIFM2	ENST00000307864	human	ensembl	74_37	-1	known	silent	c.945	p.Q315	1.000	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Pyridine_nuc-diS_OxRdtase_2,prints_Rng_hydrolase-like	-	no_errors	AIFM2	HGNC	ENSG00000042286				37	0	0	20	9	31.0345
DNAJB12	0	genome.wustl.edu	37	10	74114697	74114697	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	74114697	74114697	G	T	SNP	DNAJB12	ENST00000338820	human	ensembl	74_37	-1	known	missense	c.61	p.R21S	0.980	NULL	pfam_DUF1977_DnaJ-like,pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB12	HGNC	ENSG00000148719				45	0	0	29	12	29.2683
ENSG00000271880	0	genome.wustl.edu	37	10	88769420	88769420	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	88769420	88769420	C	T	SNP	ENSG00000271880	ENST00000433214	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-96C23.5	Clone_based_vega_gene	ENSG00000271880				207	0	0	140	74	34.5794
HTR7	0	genome.wustl.edu	37	10	92617113	92617113	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	92617113	92617113	C	T	SNP	HTR7	ENST00000336152	human	ensembl	74_37	-1	known	missense	c.316	p.V106M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT_7_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	HTR7	HGNC	ENSG00000148680				96	0	0	58	34	36.9565
HECTD2	0	genome.wustl.edu	37	10	93221959	93221959	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	93221959	93221959	C	T	SNP	HECTD2	ENST00000371681	human	ensembl	74_37	+1	known	silent	c.618	p.C206	0.000	NULL	superfamily_Globin-like	-	no_errors	HECTD2	HGNC	ENSG00000165338				137	0	0	56	37	39.7849
TUBB8	0	genome.wustl.edu	37	10	93397	93397	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	93397	93397	G	A	SNP	TUBB8	ENST00000309812	human	ensembl	74_37	-1	known	missense	c.935	p.T312M	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB8	HGNC	ENSG00000173876				188	0	0	108	42	28
ZDHHC16	0	genome.wustl.edu	37	10	99211554	99211554	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	99211554	99211554	A	T	SNP	ZDHHC16	ENST00000370854	human	ensembl	74_37	+1	known	missense	c.122	p.Y41F	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC16	HGNC	ENSG00000171307				60	0	0	30	21	41.1765
MMP10	0	genome.wustl.edu	37	11	102650093	102650093	+	Splice_Site	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	102650093	102650093	C	A	SNP	MMP10	ENST00000279441	human	ensembl	74_37	-1	known	splice_site	c.348-1	e3-1	1.000	-	-	-	no_errors	MMP10	HGNC	ENSG00000166670				106	0	0	72	28	28
NNMT	0	genome.wustl.edu	37	11	114182908	114182908	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	114182908	114182908	C	T	SNP	NNMT	ENST00000299964	human	ensembl	74_37	+1	known	silent	c.504	p.A168	0.009	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	NNMT	HGNC	ENSG00000166741				102	0	0	51	33	39.2857
SIDT2	0	genome.wustl.edu	37	11	117052201	117052201	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	117052201	117052201	C	T	SNP	SIDT2	ENST00000278951	human	ensembl	74_37	+1	known	missense	c.253	p.R85C	1.000	NULL	NULL	-	no_errors	SIDT2	HGNC	ENSG00000149577				82	0	0	40	26	39.3939
TMPRSS4	0	genome.wustl.edu	37	11	117973950	117973950	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	117973950	117973950	G	A	SNP	TMPRSS4	ENST00000437212	human	ensembl	74_37	+1	known	missense	c.292	p.E98K	0.042	pfscan_SRCR	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS4	HGNC	ENSG00000137648				136	0	0	75	44	36.9748
RNF26	0	genome.wustl.edu	37	11	119207069	119207069	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	119207069	119207069	G	A	SNP	RNF26	ENST00000311413	human	ensembl	74_37	+1	known	missense	c.1237	p.V413I	0.000	pfscan_Znf_RING	pfscan_Znf_RING	-	no_errors	RNF26	HGNC	ENSG00000173456				114	0	0	69	42	37.8378
OR10G9	0	genome.wustl.edu	37	11	123894243	123894243	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	123894243	123894243	A	G	SNP	OR10G9	ENST00000375024	human	ensembl	74_37	+1	known	missense	c.524	p.H175R	0.534	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G9	HGNC	ENSG00000236981				247	0	0	160	50	23.8095
ROBO3	0	genome.wustl.edu	37	11	124738822	124738822	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	124738822	124738822	T	C	SNP	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	silent	c.285	p.I95	0.975	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134				24	0	0	6	5	45.4545
MUC5B	0	genome.wustl.edu	37	11	1262736	1262736	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	1262736	1262736	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.4635	p.Q1545	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				30	0	0	16	11	40.7407
MUC5B	0	genome.wustl.edu	37	11	1265475	1265475	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	1265475	1265475	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.7374	p.P2458	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				132	0	0	69	35	33.6538
MUC5B	0	genome.wustl.edu	37	11	1271141	1271141	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	1271141	1271141	C	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.13040	p.P4347H	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				157	0	0	107	52	32.7044
NFRKB	0	genome.wustl.edu	37	11	129743720	129743720	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	129743720	129743720	C	T	SNP	NFRKB	ENST00000524794	human	ensembl	74_37	-1	known	missense	c.2545	p.A849T	0.300	NULL	NULL	-	no_errors	NFRKB	HGNC	ENSG00000170322				97	0	0	62	36	36.7347
APLP2	0	genome.wustl.edu	37	11	129979402	129979402	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	129979402	129979402	C	T	SNP	APLP2	ENST00000263574	human	ensembl	74_37	+1	known	missense	c.184	p.H62Y	1.000	pfam_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_heparin-bd,smart_Amyloid_glyco_extra	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APLP2	HGNC	ENSG00000084234				63	0	0	29	18	38.2979
ADAMTS15	0	genome.wustl.edu	37	11	130319163	130319163	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	130319163	130319163	C	T	SNP	ADAMTS15	ENST00000299164	human	ensembl	74_37	+1	known	nonsense	c.295	p.R99*	1.000	pfam_Peptidase_M12B_N	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS,prints_Pept_M12B_ADAM-TS8	-	no_errors	ADAMTS15	HGNC	ENSG00000166106				119	0	0	82	16	16.3265
NTM	0	genome.wustl.edu	37	11	132082036	132082036	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	132082036	132082036	C	T	SNP	NTM	ENST00000539799	human	ensembl	74_37	+1	known	missense	c.521	p.P174L	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NTM	HGNC	ENSG00000182667				115	0	0	67	14	17.284
ABCC8	0	genome.wustl.edu	37	11	17498278	17498278	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	17498278	17498278	G	A	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.46	p.R16W	1.000	prints_Surea_rcpt-1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071				27	0	0	18	8	30.7692
PTPN5	0	genome.wustl.edu	37	11	18763931	18763931	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	18763931	18763931	G	A	SNP	PTPN5	ENST00000358540	human	ensembl	74_37	-1	known	silent	c.603	p.I201	0.003	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN5	HGNC	ENSG00000110786				60	0	0	38	19	33.3333
BET1L	0	genome.wustl.edu	37	11	205421	205421	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	205421	205421	G	A	SNP	BET1L	ENST00000382762	human	ensembl	74_37	-1	known	missense	c.217	p.R73C	1.000	pfam_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	BET1L	HGNC	ENSG00000177951				34	0	0	34	17	33.3333
NLRP6	0	genome.wustl.edu	37	11	281297	281297	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	281297	281297	C	T	SNP	NLRP6	ENST00000312165	human	ensembl	74_37	+1	known	silent	c.1563	p.T521	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP6	HGNC	ENSG00000174885				61	0	0	55	17	23.6111
ATG13	0	genome.wustl.edu	37	11	46691079	46691079	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	46691079	46691079	C	G	SNP	ATG13	ENST00000312040	human	ensembl	74_37	+1	known	missense	c.1473	p.D491E	1.000	NULL	pfam_Autophagy-rel_p13	-	no_errors	ATG13	HGNC	ENSG00000175224				90	0	0	37	26	41.2698
ARHGAP1	0	genome.wustl.edu	37	11	46702070	46702070	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	46702070	46702070	G	A	SNP	ARHGAP1	ENST00000311956	human	ensembl	74_37	-1	known	missense	c.787	p.L263F	0.982	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_CRAL-TRIO_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_RhoGAP_dom,pfscan_CRAL-TRIO_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP1	HGNC	ENSG00000175220				76	0	0	48	10	17.2414
LRP4	0	genome.wustl.edu	37	11	46894694	46894694	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	46894694	46894694	G	A	SNP	LRP4	ENST00000378623	human	ensembl	74_37	-1	known	silent	c.4540	p.L1514	1.000	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP4	HGNC	ENSG00000134569				129	0	0	56	25	30.8642
C11orf35	0	genome.wustl.edu	37	11	555902	555902	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	555902	555902	C	T	SNP	C11orf35	ENST00000329451	human	ensembl	74_37	-1	known	missense	c.1406	p.R469H	0.043	NULL	pfam_Lamin_tail_dom	-	no_errors	C11orf35	HGNC	ENSG00000185522				57	0	0	23	13	36.1111
OR8H3	0	genome.wustl.edu	37	11	55890155	55890155	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	55890155	55890155	T	C	SNP	OR8H3	ENST00000313472	human	ensembl	74_37	+1	known	missense	c.307	p.C103R	0.006	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H3	HGNC	ENSG00000181761				484	0	0	212	131	38.1924
OR5R1	0	genome.wustl.edu	37	11	56185040	56185040	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	56185040	56185040	G	T	SNP	OR5R1	ENST00000312253	human	ensembl	74_37	-1	known	silent	c.669	p.A223	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5R1	HGNC	ENSG00000174942				69	0	0	83	14	14.433
TRIM6	0	genome.wustl.edu	37	11	5632278	5632278	+	Silent	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	5632278	5632278	T	G	SNP	TRIM6	ENST00000380097	human	ensembl	74_37	+1	known	silent	c.1257	p.A419	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM6	HGNC	ENSG00000121236				134	0	0	79	31	28.1818
DTX4	0	genome.wustl.edu	37	11	58949400	58949400	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	58949400	58949400	G	A	SNP	DTX4	ENST00000227451	human	ensembl	74_37	+1	known	missense	c.400	p.V134I	0.998	pfam_WWE-dom,smart_WWE-dom_subgr,pfscan_WWE-dom	pfam_WWE-dom,pfam_Znf_C3HC4_RING-type,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX4	HGNC	ENSG00000110042				140	0	0	62	34	35.4167
DTX4	0	genome.wustl.edu	37	11	58949530	58949530	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	58949530	58949530	G	A	SNP	DTX4	ENST00000227451	human	ensembl	74_37	+1	known	missense	c.530	p.S177N	1.000	NULL	pfam_WWE-dom,pfam_Znf_C3HC4_RING-type,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX4	HGNC	ENSG00000110042				69	0	0	35	7	16.6667
TMEM132A	0	genome.wustl.edu	37	11	60699530	60699530	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	60699530	60699530	C	T	SNP	TMEM132A	ENST00000005286	human	ensembl	74_37	+1	known	silent	c.1290	p.D430	0.026	NULL	NULL	-	no_errors	TMEM132A	HGNC	ENSG00000006118				104	1	0.952381	46	30	39.4737
SYT7	0	genome.wustl.edu	37	11	61318905	61318905	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	61318905	61318905	C	T	SNP	SYT7	ENST00000263846	human	ensembl	74_37	-1	known	missense	c.166	p.V56M	0.997	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT7	HGNC	ENSG00000011347				124	0	0	72	20	21.7391
C11orf84	0	genome.wustl.edu	37	11	63585422	63585422	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	63585422	63585422	C	T	SNP	C11orf84	ENST00000294244	human	ensembl	74_37	+1	known	silent	c.273	p.C91	1.000	NULL	NULL	-	no_errors	C11orf84	HGNC	ENSG00000168005				56	0	0	34	12	26.087
TRPT1	0	genome.wustl.edu	37	11	63992188	63992188	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	63992188	63992188	A	G	SNP	TRPT1	ENST00000394546	human	ensembl	74_37	-1	known	missense	c.335	p.V112A	0.987	pfam_Ptrans_KptA/Tpt1	pfam_Ptrans_KptA/Tpt1	-	no_errors	TRPT1	HGNC	ENSG00000149743				73	0	0	46	11	19.2982
NRXN2	0	genome.wustl.edu	37	11	64390507	64390507	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	64390507	64390507	G	A	SNP	NRXN2	ENST00000265459	human	ensembl	74_37	-1	known	silent	c.3891	p.I1297	0.387	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076				20	0	0	11	5	31.25
MAP4K2	0	genome.wustl.edu	37	11	64569590	64569590	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	64569590	64569590	G	A	SNP	MAP4K2	ENST00000294066	human	ensembl	74_37	-1	known	missense	c.314	p.T105I	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MAP4K2	HGNC	ENSG00000168067				39	0	0	20	5	20
NAALADL1	0	genome.wustl.edu	37	11	64815659	64815659	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	64815659	64815659	G	A	SNP	NAALADL1	ENST00000358658	human	ensembl	74_37	-1	known	missense	c.1313	p.T438M	0.741	pfam_Peptidase_M28	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL1	HGNC	ENSG00000168060				188	0	0	134	24	15.1899
MALAT1	0	genome.wustl.edu	37	11	65271397	65271397	+	RNA	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	65271397	65271397	T	C	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				15	0	0	10	4	28.5714
MALAT1	0	genome.wustl.edu	37	11	65272645	65272645	+	RNA	SNP	T	T	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	65272645	65272645	T	A	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562				54	0	0	41	8	16.3265
LTBP3	0	genome.wustl.edu	37	11	65325120	65325120	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	65325120	65325120	G	A	SNP	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	missense	c.311	p.T104M	0.999	NULL	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056				117	0	0	56	37	39.7849
RELA	0	genome.wustl.edu	37	11	65426295	65426295	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	65426295	65426295	T	C	SNP	RELA	ENST00000406246	human	ensembl	74_37	-1	known	splice_site	c.560-2	e7-2	1.000	-	-	-	no_errors	RELA	HGNC	ENSG00000173039				67	0	0	43	31	41.8919
PITPNM1	0	genome.wustl.edu	37	11	67261407	67261407	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	67261407	67261407	C	T	SNP	PITPNM1	ENST00000356404	human	ensembl	74_37	-1	known	silent	c.2994	p.V998	1.000	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697				17	0	0	14	3	17.6471
PITPNM1	0	genome.wustl.edu	37	11	67267152	67267152	+	RNA	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	67267152	67267152	T	C	SNP	PITPNM1	ENST00000525521	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PITPNM1	HGNC	ENSG00000110697				34	0	0	19	8	29.6296
ALDH3B1	0	genome.wustl.edu	37	11	67786680	67786680	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	67786680	67786680	G	A	SNP	ALDH3B1	ENST00000007633	human	ensembl	74_37	+1	known	missense	c.433	p.V145I	0.000	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	-	no_errors	ALDH3B1	HGNC	ENSG00000006534				29	0	0	17	8	32
DEAF1	0	genome.wustl.edu	37	11	687963	687963	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	687963	687963	G	A	SNP	DEAF1	ENST00000382409	human	ensembl	74_37	-1	known	silent	c.612	p.P204	0.715	pfam_SAND_dom,superfamily_SAND_dom-like,smart_SAND_dom,pfscan_SAND_dom	pfam_SAND_dom,pfam_Znf_MYND,superfamily_SAND_dom-like,smart_SAND_dom,pfscan_Znf_MYND,pfscan_SAND_dom	-	no_errors	DEAF1	HGNC	ENSG00000177030				63	0	0	35	18	33.9623
P2RY6	0	genome.wustl.edu	37	11	73007933	73007933	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	73007933	73007933	C	T	SNP	P2RY6	ENST00000349767	human	ensembl	74_37	+1	known	missense	c.370	p.R124C	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y6_rcpt,prints_GPCR_Rhodpsn,prints_P2Y3_rcpt,prints_Protea_act_rcpt	-	no_errors	P2RY6	HGNC	ENSG00000171631				104	0	0	66	29	30.5263
TENM4	0	genome.wustl.edu	37	11	78449536	78449536	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	78449536	78449536	T	C	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.2836	p.N946D	0.999	superfamily_CarboxyPept-like_regulatory	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				32	0	0	22	10	31.25
FAT3	0	genome.wustl.edu	37	11	92086841	92086841	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	92086841	92086841	T	C	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.1563	p.I521	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				120	0	0	82	30	26.7857
CCDC82	0	genome.wustl.edu	37	11	96117891	96117891	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	96117891	96117891	A	G	SNP	CCDC82	ENST00000278520	human	ensembl	74_37	-1	known	silent	c.21	p.H7	0.973	NULL	NULL	-	no_errors	CCDC82	HGNC	ENSG00000149231				37	0	0	14	9	39.1304
CNTN5	0	genome.wustl.edu	37	11	99827598	99827598	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	99827598	99827598	G	A	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	missense	c.734	p.R245Q	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972				85	0	0	47	20	29.8507
SPIC	0	genome.wustl.edu	37	12	101873423	101873423	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	101873423	101873423	A	G	SNP	SPIC	ENST00000299272	human	ensembl	74_37	+1	known	missense	c.161	p.Y54C	0.000	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	SPIC	HGNC	ENSG00000166211				62	0	0	39	9	18.75
ENSG00000255641	0	genome.wustl.edu	37	12	10587931	10587931	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	10587931	10587931	T	C	SNP	ENSG00000255641	ENST00000539033	human	ensembl	74_37	-1	known	missense	c.266	p.K89R	0.000	pfam_Herpes_UL45-like	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	NKG2-E	Uniprot_gn	ENSG00000255641				168	0	0	112	28	20
C12orf23	0	genome.wustl.edu	37	12	107365084	107365084	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	107365084	107365084	C	G	SNP	C12orf23	ENST00000280756	human	ensembl	74_37	+1	known	missense	c.266	p.A89G	1.000	NULL	NULL	-	no_errors	C12orf23	HGNC	ENSG00000151135				97	0	0	58	30	34.0909
FICD	0	genome.wustl.edu	37	12	108913176	108913176	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	108913176	108913176	C	T	SNP	FICD	ENST00000552695	human	ensembl	74_37	+1	known	missense	c.1301	p.T434I	0.992	superfamily_Fido	pfam_Fido,superfamily_Fido,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	FICD	HGNC	ENSG00000198855				67	0	0	30	12	28.5714
KCTD10	0	genome.wustl.edu	37	12	109889532	109889532	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	109889532	109889532	C	T	SNP	KCTD10	ENST00000228495	human	ensembl	74_37	-1	known	silent	c.810	p.A270	0.000	NULL	pfam_T1-type_BTB,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	KCTD10	HGNC	ENSG00000110906				54	0	0	30	15	33.3333
CUX2	0	genome.wustl.edu	37	12	111734323	111734323	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	111734323	111734323	C	T	SNP	CUX2	ENST00000261726	human	ensembl	74_37	+1	known	silent	c.684	p.Y228	0.993	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_Prefoldin,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX2	HGNC	ENSG00000111249				29	0	0	16	5	23.8095
HECTD4	0	genome.wustl.edu	37	12	112607396	112607396	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	112607396	112607396	G	A	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.11603	p.S3868L	0.996	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064				63	0	0	43	26	37.6812
MED13L	0	genome.wustl.edu	37	12	116429481	116429481	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	116429481	116429481	T	C	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	missense	c.3278	p.N1093S	1.000	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066				49	0	0	24	17	41.4634
RNFT2	0	genome.wustl.edu	37	12	117187926	117187926	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	117187926	117187926	C	T	SNP	RNFT2	ENST00000257575	human	ensembl	74_37	+1	known	missense	c.364	p.R122C	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNFT2	HGNC	ENSG00000135119				17	0	0	7	5	41.6667
WDR66	0	genome.wustl.edu	37	12	122396297	122396297	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	122396297	122396297	A	G	SNP	WDR66	ENST00000288912	human	ensembl	74_37	+1	known	missense	c.1850	p.Y617C	0.270	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR66	HGNC	ENSG00000158023				206	0	0	103	55	34.8101
ZCCHC8	0	genome.wustl.edu	37	12	122958509	122958509	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	122958509	122958509	G	A	SNP	ZCCHC8	ENST00000336229	human	ensembl	74_37	-1	known	silent	c.1659	p.S553	0.116	NULL	pfam_PSP,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_PSP,pfscan_Znf_CCHC	-	no_errors	ZCCHC8	HGNC	ENSG00000033030				289	0	0	156	68	30.3571
KNTC1	0	genome.wustl.edu	37	12	123060345	123060345	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	123060345	123060345	A	G	SNP	KNTC1	ENST00000333479	human	ensembl	74_37	+1	known	splice_site	c.2487-2	e28-2	0.993	-	-	-	no_errors	KNTC1	HGNC	ENSG00000184445				20	0	0	15	3	16.6667
PITPNM2	0	genome.wustl.edu	37	12	123470761	123470761	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	123470761	123470761	C	T	SNP	PITPNM2	ENST00000320201	human	ensembl	74_37	-1	known	missense	c.3863	p.R1288H	1.000	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM2	HGNC	ENSG00000090975				10	0	0	5	3	37.5
EP400	0	genome.wustl.edu	37	12	132445499	132445499	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	132445499	132445499	G	A	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	missense	c.335	p.R112Q	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495				24	0	0	17	7	29.1667
GOLGA3	0	genome.wustl.edu	37	12	133349748	133349748	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	133349748	133349748	G	A	SNP	GOLGA3	ENST00000204726	human	ensembl	74_37	-1	known	silent	c.4440	p.R1480	0.001	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615				14	0	0	2	3	60
LMO3	0	genome.wustl.edu	37	12	16753644	16753644	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	16753644	16753644	C	A	SNP	LMO3	ENST00000541295	human	ensembl	74_37	-1	known	missense	c.205	p.G69C	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LMO3	HGNC	ENSG00000048540				92	0	0	74	7	8.64198
KRAS	0	genome.wustl.edu	37	12	25398281	25398281	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	25398281	25398281	C	T	SNP	KRAS	ENST00000256078	human	ensembl	74_37	-1	known	missense	c.38	p.G13D	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703				29	0	0	14	3	17.6471
TMTC1	0	genome.wustl.edu	37	12	29709910	29709910	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	29709910	29709910	G	A	SNP	TMTC1	ENST00000256062	human	ensembl	74_37	-1	known	missense	c.1232	p.A411V	1.000	pfam_PIK-rel_kinase_FAT,smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687				92	0	0	30	29	49.1525
KMT2D	0	genome.wustl.edu	37	12	49420859	49420859	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	49420859	49420859	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.14890	p.R4964C	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				146	0	0	67	26	27.957
AAAS	0	genome.wustl.edu	37	12	53701365	53701365	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	53701365	53701365	G	T	SNP	AAAS	ENST00000209873	human	ensembl	74_37	-1	known	missense	c.1549	p.L517I	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AAAS	HGNC	ENSG00000094914				91	0	0	51	31	37.8049
ZBTB39	0	genome.wustl.edu	37	12	57397071	57397071	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	57397071	57397071	C	T	SNP	ZBTB39	ENST00000300101	human	ensembl	74_37	-1	known	missense	c.1631	p.S544N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB39	HGNC	ENSG00000166860				34	0	0	25	8	24.2424
GLI1	0	genome.wustl.edu	37	12	57859007	57859007	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	57859007	57859007	C	A	SNP	GLI1	ENST00000228682	human	ensembl	74_37	+1	known	missense	c.503	p.P168H	0.986	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI1	HGNC	ENSG00000111087				48	0	0	25	12	32.4324
AVIL	0	genome.wustl.edu	37	12	58202264	58202264	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	58202264	58202264	G	A	SNP	AVIL	ENST00000257861	human	ensembl	74_37	-1	known	missense	c.1007	p.S336L	1.000	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	AVIL	HGNC	ENSG00000135407				47	0	0	39	24	38.0952
TNFRSF1A	0	genome.wustl.edu	37	12	6438696	6438696	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	6438696	6438696	C	T	SNP	TNFRSF1A	ENST00000162749	human	ensembl	74_37	-1	known	missense	c.1150	p.E384K	1.000	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain,prints_TNFR_1A	pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_1A	-	no_errors	TNFRSF1A	HGNC	ENSG00000067182				24	0	0	16	11	40.7407
XPOT	0	genome.wustl.edu	37	12	64808688	64808688	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	64808688	64808688	C	T	SNP	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	missense	c.62	p.A21V	1.000	superfamily_ARM-type_fold,smart_Importin-beta_N	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575				83	0	0	69	7	9.21053
LPAR5	0	genome.wustl.edu	37	12	6730002	6730002	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	6730002	6730002	G	A	SNP	LPAR5	ENST00000329858	human	ensembl	74_37	-1	known	missense	c.413	p.A138V	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	LPAR5	HGNC	ENSG00000184574				10	0	0	4	3	42.8571
USP5	0	genome.wustl.edu	37	12	6964600	6964600	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	6964600	6964600	G	A	SNP	USP5	ENST00000229268	human	ensembl	74_37	+1	known	silent	c.147	p.T49	0.170	pirsf_Ubiquitinyl_hydrolase	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,pfam_Znf_UBP,superfamily_UBA-like,smart_Znf_UBP,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP5	HGNC	ENSG00000111667				248	0	0	137	59	30.102
PTPRR	0	genome.wustl.edu	37	12	71155319	71155319	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	71155319	71155319	G	A	SNP	PTPRR	ENST00000283228	human	ensembl	74_37	-1	known	missense	c.559	p.R187C	0.951	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRR	HGNC	ENSG00000153233				126	1	0.787402	79	37	31.8966
NAV3	0	genome.wustl.edu	37	12	78571062	78571062	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	78571062	78571062	G	T	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.5266	p.A1756S	0.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798				139	0	0	72	39	35.1351
LUM	0	genome.wustl.edu	37	12	91502483	91502483	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	91502483	91502483	G	T	SNP	LUM	ENST00000266718	human	ensembl	74_37	-1	known	missense	c.274	p.L92M	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LUM	HGNC	ENSG00000139329				69	0	0	35	23	39.6552
A2M	0	genome.wustl.edu	37	12	9268558	9268558	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	9268558	9268558	C	T	SNP	A2M	ENST00000467091	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	A2M	HGNC	ENSG00000175899				12	0	0	8	5	38.4615
WNK1	0	genome.wustl.edu	37	12	993365	993365	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	993365	993365	G	T	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	missense	c.5294	p.R1765L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237				156	0	0	77	41	34.7458
ANKS1B	0	genome.wustl.edu	37	12	99837512	99837512	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	99837512	99837512	T	C	SNP	ANKS1B	ENST00000329257	human	ensembl	74_37	-1	known	missense	c.1514	p.D505G	1.000	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_PTB/PI_dom,pfam_SAM_2,pfam_PTB,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,smart_PTB/PI_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PTB/PI_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS1B	HGNC	ENSG00000185046				92	0	0	60	20	25
NALCN	0	genome.wustl.edu	37	13	102029266	102029266	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	102029266	102029266	A	G	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	splice_site	c.515+2	e4+2	1.000	-	-	-	no_errors	NALCN	HGNC	ENSG00000102452				70	0	0	42	16	27.5862
FAM155A	0	genome.wustl.edu	37	13	108518356	108518356	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	108518356	108518356	G	A	SNP	FAM155A	ENST00000375915	human	ensembl	74_37	-1	known	missense	c.589	p.R197W	1.000	NULL	NULL	-	no_errors	FAM155A	HGNC	ENSG00000204442				164	1	0.606061	88	62	41.3333
LAMP1	0	genome.wustl.edu	37	13	113960868	113960868	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	113960868	113960868	G	A	SNP	LAMP1	ENST00000332556	human	ensembl	74_37	+1	known	missense	c.130	p.A44T	1.000	NULL	pfam_Lysosome-assoc_membr_glycop,prints_Lysosome-assoc_membr_glycop	-	no_errors	LAMP1	HGNC	ENSG00000185896				109	0	0	73	27	27
XPO4	0	genome.wustl.edu	37	13	21417957	21417957	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	21417957	21417957	G	A	SNP	XPO4	ENST00000255305	human	ensembl	74_37	-1	known	silent	c.525	p.N175	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	XPO4	HGNC	ENSG00000132953				59	0	0	34	18	34.6154
SACS	0	genome.wustl.edu	37	13	23906391	23906391	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	23906391	23906391	C	T	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.11624	p.R3875H	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				200	0	0	115	43	27.2152
SHISA2	0	genome.wustl.edu	37	13	26620736	26620736	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	26620736	26620736	C	T	SNP	SHISA2	ENST00000319420	human	ensembl	74_37	-1	known	missense	c.803	p.G268D	0.842	NULL	NULL	-	no_errors	SHISA2	HGNC	ENSG00000180730				95	0	0	55	29	34.5238
RNF6	0	genome.wustl.edu	37	13	26788460	26788460	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	26788460	26788460	A	G	SNP	RNF6	ENST00000346166	human	ensembl	74_37	-1	known	missense	c.1559	p.L520P	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF6	HGNC	ENSG00000127870				90	0	0	79	40	33.6134
FLT3	0	genome.wustl.edu	37	13	28578289	28578289	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	28578289	28578289	C	G	SNP	FLT3	ENST00000380982	human	ensembl	74_37	-1	known	missense	c.2891	p.R964P	0.001	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FLT3	HGNC	ENSG00000122025				54	0	0	38	8	17.3913
SPG20	0	genome.wustl.edu	37	13	36905729	36905729	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	36905729	36905729	C	A	SNP	SPG20	ENST00000355182	human	ensembl	74_37	-1	known	missense	c.815	p.C272F	1.000	NULL	pfam_Senescence/spartin,pfam_MIT,smart_MIT	-	no_errors	SPG20	HGNC	ENSG00000133104				47	0	0	33	14	29.7872
ENOX1	0	genome.wustl.edu	37	13	43788214	43788214	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	43788214	43788214	C	T	SNP	ENOX1	ENST00000261488	human	ensembl	74_37	-1	known	missense	c.1844	p.R615H	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ENOX1	HGNC	ENSG00000120658				101	0	0	75	30	28.5714
FAM124A	0	genome.wustl.edu	37	13	51825626	51825626	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	51825626	51825626	G	A	SNP	FAM124A	ENST00000280057	human	ensembl	74_37	+1	known	silent	c.231	p.A77	0.429	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510				75	0	0	38	17	30.9091
TBC1D4	0	genome.wustl.edu	37	13	75863191	75863191	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	75863191	75863191	A	G	SNP	TBC1D4	ENST00000377636	human	ensembl	74_37	-1	known	missense	c.3542	p.V1181A	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111				98	0	0	58	32	35.5556
HSP90AA1	0	genome.wustl.edu	37	14	102551762	102551762	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	102551762	102551762	G	T	SNP	HSP90AA1	ENST00000334701	human	ensembl	74_37	-1	known	missense	c.902	p.P301H	0.998	pirsf_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90AA1	HGNC	ENSG00000080824				42	0	0	27	8	22.8571
AKT1	0	genome.wustl.edu	37	14	105239379	105239379	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	105239379	105239379	G	A	SNP	AKT1	ENST00000349310	human	ensembl	74_37	-1	known	silent	c.1008	p.G336	0.976	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom	-	no_errors	AKT1	HGNC	ENSG00000142208				105	0	0	46	35	43.2099
CEP170B	0	genome.wustl.edu	37	14	105344265	105344265	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	105344265	105344265	C	T	SNP	CEP170B	ENST00000453495	human	ensembl	74_37	+1	known	missense	c.239	p.T80M	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170B	HGNC	ENSG00000099814				15	0	0	4	3	42.8571
PACS2	0	genome.wustl.edu	37	14	105851250	105851250	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	105851250	105851250	G	A	SNP	PACS2	ENST00000458164	human	ensembl	74_37	+1	known	silent	c.1926	p.T642	0.003	pfam_Phosphofurin_acidic_CS-1	pfam_Phosphofurin_acidic_CS-1	-	no_errors	PACS2	HGNC	ENSG00000179364				12	0	0	5	2	28.5714
OR4K17	0	genome.wustl.edu	37	14	20586464	20586464	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	20586464	20586464	A	C	SNP	OR4K17	ENST00000315543	human	ensembl	74_37	+1	known	missense	c.899	p.K300T	0.012	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K17	HGNC	ENSG00000176230				54	0	0	48	15	23.8095
METTL17	0	genome.wustl.edu	37	14	21458721	21458721	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	21458721	21458721	G	A	SNP	METTL17	ENST00000382985	human	ensembl	74_37	+1	known	missense	c.328	p.A110T	0.937	NULL	pfam_Ribosomal_Rsm22_bac-type,pfam_Methyltransf_11	-	no_errors	METTL17	HGNC	ENSG00000165792				68	0	0	42	28	40
CHD8	0	genome.wustl.edu	37	14	21897486	21897486	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	21897486	21897486	C	T	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	silent	c.852	p.S284	0.563	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888				50	0	0	18	15	45.4545
ABHD4	0	genome.wustl.edu	37	14	23072850	23072850	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	23072850	23072850	T	C	SNP	ABHD4	ENST00000428304	human	ensembl	74_37	+1	known	missense	c.506	p.V169A	1.000	pfam_AB_hydrolase_1,prints_AB_hydrolase_1	pfam_AB_hydrolase_1,prints_AB_hydrolase_1	-	no_errors	ABHD4	HGNC	ENSG00000100439				148	1	0.671141	75	33	30.5556
AJUBA	0	genome.wustl.edu	37	14	23451381	23451381	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	23451381	23451381	C	A	SNP	AJUBA	ENST00000262713	human	ensembl	74_37	-1	known	missense	c.95	p.G32V	0.505	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	AJUBA	HGNC	ENSG00000129474				64	0	0	40	25	38.4615
MYH6	0	genome.wustl.edu	37	14	23859422	23859422	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	23859422	23859422	C	T	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	silent	c.3576	p.A1192	0.006	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616				18	0	0	18	12	40
DCAF11	0	genome.wustl.edu	37	14	24590651	24590651	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	24590651	24590651	C	T	SNP	DCAF11	ENST00000446197	human	ensembl	74_37	+1	known	missense	c.1324	p.R442C	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p23,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p23,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	DCAF11	HGNC	ENSG00000100897				88	0	0	52	28	35
NOVA1	0	genome.wustl.edu	37	14	26917657	26917657	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	26917657	26917657	A	G	SNP	NOVA1	ENST00000539517	human	ensembl	74_37	-1	known	silent	c.1032	p.A344	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	NOVA1	HGNC	ENSG00000139910				30	0	0	20	11	35.4839
RALGAPA1	0	genome.wustl.edu	37	14	36197626	36197626	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	36197626	36197626	G	A	SNP	RALGAPA1	ENST00000258840	human	ensembl	74_37	-1	known	missense	c.1678	p.R560C	1.000	NULL	pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPA1	HGNC	ENSG00000174373				32	0	0	15	15	50
NKX2-1	0	genome.wustl.edu	37	14	36987121	36987121	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	36987121	36987121	G	T	SNP	NKX2-1	ENST00000354822	human	ensembl	74_37	-1	known	missense	c.568	p.P190T	1.000	superfamily_Homeodomain-like,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-1	HGNC	ENSG00000136352				25	0	0	14	7	33.3333
NKX2-8	0	genome.wustl.edu	37	14	37051465	37051465	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	37051465	37051465	G	A	SNP	NKX2-8	ENST00000258829	human	ensembl	74_37	-1	known	silent	c.130	p.L44	0.992	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-8	HGNC	ENSG00000136327				28	0	0	16	4	20
FOXA1	0	genome.wustl.edu	37	14	38061521	38061521	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	38061521	38061521	G	A	SNP	FOXA1	ENST00000250448	human	ensembl	74_37	-1	known	silent	c.468	p.G156	0.425	pfam_Fork-head_N	pfam_TF_fork_head,pfam_Fork-head_N,pfam_Forkhead_box_C,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXA1	HGNC	ENSG00000129514				61	0	0	33	22	40
LRFN5	0	genome.wustl.edu	37	14	42355997	42355997	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	42355997	42355997	C	T	SNP	LRFN5	ENST00000298119	human	ensembl	74_37	+1	known	missense	c.169	p.R57W	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN5	HGNC	ENSG00000165379				48	0	0	27	16	37.2093
LRFN5	0	genome.wustl.edu	37	14	42360596	42360596	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	42360596	42360596	C	T	SNP	LRFN5	ENST00000298119	human	ensembl	74_37	+1	known	missense	c.1529	p.T510M	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN5	HGNC	ENSG00000165379				223	0	0	114	53	31.7365
JKAMP	0	genome.wustl.edu	37	14	59961785	59961785	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	59961785	59961785	G	A	SNP	JKAMP	ENST00000356057	human	ensembl	74_37	+1	known	missense	c.325	p.A109T	1.000	pfam_DUF766	pfam_DUF766	-	no_errors	JKAMP	HGNC	ENSG00000050130				28	0	0	25	5	16.6667
RTN1	0	genome.wustl.edu	37	14	60097226	60097226	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	60097226	60097226	G	A	SNP	RTN1	ENST00000557422	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RTN1	HGNC	ENSG00000139970				190	0	0	109	61	35.8824
EIF2S1	0	genome.wustl.edu	37	14	67843159	67843159	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	67843159	67843159	T	C	SNP	EIF2S1	ENST00000256383	human	ensembl	74_37	+1	known	missense	c.325	p.Y109H	1.000	superfamily_TIF2_asu_middle	pfam_TIF_2_asu,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_TIF2_asu_C,superfamily_TIF2_asu_middle,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	EIF2S1	HGNC	ENSG00000134001				30	0	0	19	11	36.6667
SLC8A3	0	genome.wustl.edu	37	14	70512799	70512799	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	70512799	70512799	C	T	SNP	SLC8A3	ENST00000381269	human	ensembl	74_37	-1	known	silent	c.2649	p.R883	1.000	pfam_NaCa_Exmemb,tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A3	HGNC	ENSG00000100678				32	0	0	27	10	27.027
HEATR4	0	genome.wustl.edu	37	14	73976045	73976045	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	73976045	73976045	C	A	SNP	HEATR4	ENST00000334988	human	ensembl	74_37	-1	known	missense	c.1691	p.R564L	0.049	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	HEATR4	HGNC	ENSG00000187105				92	0	0	40	19	32.2034
VRTN	0	genome.wustl.edu	37	14	74825385	74825385	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	74825385	74825385	G	A	SNP	VRTN	ENST00000256362	human	ensembl	74_37	+1	known	silent	c.1899	p.A633	0.001	NULL	pfam_Transposase_8	-	no_errors	VRTN	HGNC	ENSG00000133980				69	0	0	22	10	31.25
ALKBH1	0	genome.wustl.edu	37	14	78140528	78140528	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	78140528	78140528	G	A	SNP	ALKBH1	ENST00000216489	human	ensembl	74_37	-1	known	missense	c.797	p.T266M	0.999	tigrfam_Alkb	tigrfam_Alkb	-	no_errors	ALKBH1	HGNC	ENSG00000100601				44	0	0	24	15	38.4615
FLRT2	0	genome.wustl.edu	37	14	86089608	86089608	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	86089608	86089608	C	T	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	missense	c.1750	p.R584W	1.000	NULL	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070				170	1	0.584795	97	48	33.1034
EML5	0	genome.wustl.edu	37	14	89153595	89153595	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	89153595	89153595	G	A	SNP	EML5	ENST00000554922	human	ensembl	74_37	-1	known	missense	c.2819	p.A940V	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML5	HGNC	ENSG00000165521				18	0	0	7	5	41.6667
SMEK1	0	genome.wustl.edu	37	14	91942831	91942831	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	91942831	91942831	G	A	SNP	SMEK1	ENST00000554943	human	ensembl	74_37	-1	known	missense	c.1031	p.T344M	1.000	pfam_DUF625,superfamily_ARM-type_fold	pfam_DUF625,superfamily_ARM-type_fold	-	no_errors	SMEK1	HGNC	ENSG00000100796				78	0	0	28	19	40.4255
LINC00521	0	genome.wustl.edu	37	14	94467624	94467624	+	RNA	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	94467624	94467624	C	A	SNP	LINC00521	ENST00000314629	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	LINC00521	HGNC	ENSG00000175699				63	0	0	27	12	30.7692
ATG2B	0	genome.wustl.edu	37	14	96797724	96797724	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	96797724	96797724	G	A	SNP	ATG2B	ENST00000359933	human	ensembl	74_37	-1	known	silent	c.1719	p.H573	0.989	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2B	HGNC	ENSG00000066739				73	0	0	59	6	9.23077
ADAMTS17	0	genome.wustl.edu	37	15	100692871	100692871	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	100692871	100692871	G	A	SNP	ADAMTS17	ENST00000268070	human	ensembl	74_37	-1	known	silent	c.1419	p.N473	0.825	smart_ADAM_Cys-rich	pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS17	HGNC	ENSG00000140470				117	0	0	90	8	8.16327
CHEK2P2	0	genome.wustl.edu	37	15	20495387	20495387	+	RNA	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	20495387	20495387	T	C	SNP	CHEK2P2	ENST00000555186	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.783	-	-	-	no_errors	CHEK2P2	HGNC	ENSG00000259156				231	0	0	142	10	6.57895
HERC2P3	0	genome.wustl.edu	37	15	20651283	20651283	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	20651283	20651283	G	A	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229				202	0	0	121	19	13.5714
OR4M2	0	genome.wustl.edu	37	15	22368585	22368585	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	22368585	22368585	G	A	SNP	OR4M2	ENST00000332663	human	ensembl	74_37	+1	putative	missense	c.10	p.A4T	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4M2	HGNC	ENSG00000182974				312	0	0	235	35	12.963
OR4N4	0	genome.wustl.edu	37	15	22382692	22382692	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	22382692	22382692	T	G	SNP	OR4N4	ENST00000328795	human	ensembl	74_37	+1	known	missense	c.220	p.S74A	0.280	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N4	HGNC	ENSG00000183706				545	0	0	388	56	12.6126
HERC2P2	0	genome.wustl.edu	37	15	23311733	23311733	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	23311733	23311733	G	A	SNP	HERC2P2	ENST00000560464	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P2	HGNC	ENSG00000140181				73	0	0	41	18	30.5085
GOLGA8EP	0	genome.wustl.edu	37	15	23443516	23443516	+	RNA	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	23443516	23443516	C	A	SNP	GOLGA8EP	ENST00000526079	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.108	-	-	-	no_errors	GOLGA8EP	HGNC	ENSG00000175676				15	0	0	4	6	60
SNORD116-7	0	genome.wustl.edu	37	15	25313004	25313004	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	25313004	25313004	C	T	SNP	SNORD116-7	ENST00000384404	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	SNORD116-7	HGNC	ENSG00000207133				179	0	0	68	37	35.2381
SNORD116-15	0	genome.wustl.edu	37	15	25326502	25326502	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	25326502	25326502	G	A	SNP	SNORD116-15	ENST00000384445	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	SNORD116-15	HGNC	ENSG00000207174				207	0	0	86	57	39.8601
SNHG14	0	genome.wustl.edu	37	15	25425501	25425501	+	RNA	SNP	G	G	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	25425501	25425501	G	C	SNP	SNHG14	ENST00000441592	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				33	0	0	27	11	28.9474
LOC101929232	0	genome.wustl.edu	37	15	29078500	29078500	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	29078500	29078500	C	T	SNP	LOC101929232	ENST00000563144	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.935	-	-	-	no_errors	RP11-578F21.12	Clone_based_vega_gene	ENSG00000261377				24	0	0	25	13	34.2105
RYR3	0	genome.wustl.edu	37	15	33873717	33873717	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	33873717	33873717	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	silent	c.1446	p.L482	0.998	pfam_Ca-rel_channel	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				102	0	0	58	19	24.6753
RYR3	0	genome.wustl.edu	37	15	33893731	33893731	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	33893731	33893731	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	nonsense	c.1900	p.R634*	0.977	pfam_Ca-rel_channel,pfscan_B30.2/SPRY	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				30	0	0	16	12	42.8571
NUTM1	0	genome.wustl.edu	37	15	34649312	34649312	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	34649312	34649312	A	T	SNP	NUTM1	ENST00000333756	human	ensembl	74_37	+1	known	nonsense	c.3019	p.K1007*	0.000	NULL	NULL	-	no_errors	NUTM1	HGNC	ENSG00000184507				52	0	0	38	13	25.4902
NUTM1	0	genome.wustl.edu	37	15	34649327	34649327	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	34649327	34649327	G	C	SNP	NUTM1	ENST00000333756	human	ensembl	74_37	+1	known	missense	c.3034	p.E1012Q	0.255	NULL	NULL	-	no_errors	NUTM1	HGNC	ENSG00000184507				59	0	0	42	18	30
KNSTRN	0	genome.wustl.edu	37	15	40678643	40678643	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	40678643	40678643	G	A	SNP	KNSTRN	ENST00000249776	human	ensembl	74_37	+1	known	missense	c.385	p.G129R	0.030	NULL	NULL	-	no_errors	KNSTRN	HGNC	ENSG00000128944				52	0	0	33	14	29.7872
NUSAP1	0	genome.wustl.edu	37	15	41667943	41667943	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	41667943	41667943	C	T	SNP	NUSAP1	ENST00000559596	human	ensembl	74_37	+1	known	missense	c.1040	p.T347M	0.000	NULL	NULL	-	no_errors	NUSAP1	HGNC	ENSG00000137804				80	0	0	34	18	34.6154
PLA2G4D	0	genome.wustl.edu	37	15	42377688	42377688	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	42377688	42377688	C	T	SNP	PLA2G4D	ENST00000290472	human	ensembl	74_37	-1	known	splice_site	c.428+1	e5+1	0.984	-	-	-	no_errors	PLA2G4D	HGNC	ENSG00000159337				130	0	0	53	29	35.3659
SLC24A5	0	genome.wustl.edu	37	15	48413289	48413289	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	48413289	48413289	C	T	SNP	SLC24A5	ENST00000341459	human	ensembl	74_37	+1	known	silent	c.48	p.L16	0.000	NULL	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A5	HGNC	ENSG00000188467				47	0	0	21	8	27.5862
TMOD2	0	genome.wustl.edu	37	15	52075001	52075001	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	52075001	52075001	T	C	SNP	TMOD2	ENST00000249700	human	ensembl	74_37	+1	known	silent	c.708	p.T236	0.998	NULL	pfam_Tropomodulin	-	no_errors	TMOD2	HGNC	ENSG00000128872				157	0	0	87	52	37.4101
RFX7	0	genome.wustl.edu	37	15	56436614	56436614	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	56436614	56436614	C	T	SNP	RFX7	ENST00000423270	human	ensembl	74_37	-1	known	missense	c.263	p.S88N	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX7	HGNC	ENSG00000181827				94	0	0	42	21	33.3333
PARP16	0	genome.wustl.edu	37	15	65555515	65555515	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	65555515	65555515	C	T	SNP	PARP16	ENST00000261888	human	ensembl	74_37	-1	known	silent	c.663	p.P221	0.700	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP16	HGNC	ENSG00000138617				41	0	0	18	13	41.9355
STOML1	0	genome.wustl.edu	37	15	74277088	74277088	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	74277088	74277088	G	T	SNP	STOML1	ENST00000316900	human	ensembl	74_37	-1	known	silent	c.915	p.A305	0.989	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	pfam_Band_7,pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom,smart_Band_7,prints_Stomatin	-	no_errors	STOML1	HGNC	ENSG00000067221				63	0	0	43	27	38.5714
CYP1A1	0	genome.wustl.edu	37	15	75013634	75013634	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	75013634	75013634	G	A	SNP	CYP1A1	ENST00000379727	human	ensembl	74_37	-1	known	missense	c.1072	p.R358W	0.195	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP1,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP1A1	HGNC	ENSG00000140465				106	0	0	57	27	32.1429
CIB2	0	genome.wustl.edu	37	15	78401674	78401674	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	78401674	78401674	C	A	SNP	CIB2	ENST00000258930	human	ensembl	74_37	-1	known	missense	c.249	p.E83D	0.812	pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CIB2	HGNC	ENSG00000136425				84	0	0	45	24	34.7826
CHRNB4	0	genome.wustl.edu	37	15	78927807	78927807	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	78927807	78927807	G	A	SNP	CHRNB4	ENST00000261751	human	ensembl	74_37	-1	known	missense	c.178	p.L60F	0.999	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB4	HGNC	ENSG00000117971				133	0	0	73	38	34.2342
ADAMTS7	0	genome.wustl.edu	37	15	79092719	79092719	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	79092719	79092719	G	A	SNP	ADAMTS7	ENST00000388820	human	ensembl	74_37	-1	known	silent	c.271	p.L91	0.996	pfam_Peptidase_M12B_N	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378				21	0	0	24	5	17.2414
MEX3B	0	genome.wustl.edu	37	15	82336037	82336037	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	82336037	82336037	C	T	SNP	MEX3B	ENST00000329713	human	ensembl	74_37	-1	known	missense	c.1174	p.V392I	0.007	NULL	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3B	HGNC	ENSG00000183496				28	0	0	14	12	46.1538
SH3GL3	0	genome.wustl.edu	37	15	84245409	84245409	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	84245409	84245409	C	T	SNP	SH3GL3	ENST00000324537	human	ensembl	74_37	+1	known	silent	c.564	p.D188	0.545	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	SH3GL3	HGNC	ENSG00000140600				61	0	0	27	16	37.2093
ADAMTSL3	0	genome.wustl.edu	37	15	84373227	84373227	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	84373227	84373227	G	A	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	silent	c.156	p.G52	0.997	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218				206	0	0	109	55	33.5366
ADAMTSL3	0	genome.wustl.edu	37	15	84657541	84657541	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	84657541	84657541	A	G	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	missense	c.3815	p.D1272G	0.207	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218				89	0	0	51	12	19.0476
ALPK3	0	genome.wustl.edu	37	15	85400994	85400994	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	85400994	85400994	C	T	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	missense	c.3631	p.R1211W	0.440	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383				69	0	0	42	18	30
MRPS11	0	genome.wustl.edu	37	15	89020237	89020237	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	89020237	89020237	C	T	SNP	MRPS11	ENST00000325844	human	ensembl	74_37	+1	known	silent	c.429	p.G143	0.006	pfam_Ribosomal_S11	pfam_Ribosomal_S11	-	no_errors	MRPS11	HGNC	ENSG00000181991				51	0	0	14	8	36.3636
CRTC3	0	genome.wustl.edu	37	15	91172715	91172715	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	91172715	91172715	G	A	SNP	CRTC3	ENST00000268184	human	ensembl	74_37	+1	known	missense	c.1217	p.S406N	1.000	NULL	NULL	-	no_errors	CRTC3	HGNC	ENSG00000140577				162	1	0.613497	102	55	35.0318
MCTP2	0	genome.wustl.edu	37	15	94858782	94858782	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	94858782	94858782	T	C	SNP	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	silent	c.553	p.L185	0.007	superfamily_C2_dom	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563				51	0	0	24	8	25
IGF1R	0	genome.wustl.edu	37	15	99442794	99442794	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	99442794	99442794	C	T	SNP	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	silent	c.1191	p.V397	1.000	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443				136	0	0	59	29	32.9545
LRRC28	0	genome.wustl.edu	37	15	99926275	99926275	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	99926275	99926275	C	T	SNP	LRRC28	ENST00000301981	human	ensembl	74_37	+1	known	nonsense	c.1072	p.Q358*	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC28	HGNC	ENSG00000168904				473	0	0	247	94	27.566
TXNDC11	0	genome.wustl.edu	37	16	11781746	11781746	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	11781746	11781746	C	T	SNP	TXNDC11	ENST00000356957	human	ensembl	74_37	-1	known	missense	c.2201	p.R734Q	0.992	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC	ENSG00000153066				44	0	0	31	8	20.5128
BAIAP3	0	genome.wustl.edu	37	16	1392008	1392008	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	1392008	1392008	C	A	SNP	BAIAP3	ENST00000324385	human	ensembl	74_37	+1	known	silent	c.903	p.S301	0.991	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Munc13_subgr_dom-2,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	BAIAP3	HGNC	ENSG00000007516				51	0	0	35	17	32.6923
PRKCB	0	genome.wustl.edu	37	16	24046762	24046762	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	24046762	24046762	G	A	SNP	PRKCB	ENST00000303531	human	ensembl	74_37	+1	known	silent	c.423	p.K141	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Protein_kinase_C_a/b/g,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_DAG/PE-bd	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCB	HGNC	ENSG00000166501				97	0	0	46	32	41.0256
CCNF	0	genome.wustl.edu	37	16	2506911	2506911	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	2506911	2506911	C	T	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	missense	c.2251	p.R751C	0.687	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063				96	0	0	47	27	36.4865
IL21R	0	genome.wustl.edu	37	16	27441397	27441397	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	27441397	27441397	C	T	SNP	IL21R	ENST00000337929	human	ensembl	74_37	+1	known	missense	c.5	p.P2L	0.000	NULL	superfamily_Fibronectin_type3	-	no_errors	IL21R	HGNC	ENSG00000103522				28	0	0	14	3	17.6471
SNX29P2	0	genome.wustl.edu	37	16	29376325	29376325	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	29376325	29376325	G	A	SNP	SNX29P2	ENST00000356328	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.800	-	-	-	no_errors	SNX29P2	HGNC	ENSG00000198106				26	0	0	27	10	27.027
ZNF688	0	genome.wustl.edu	37	16	30581665	30581665	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	30581665	30581665	G	A	SNP	ZNF688	ENST00000223459	human	ensembl	74_37	-1	known	silent	c.403	p.L135	0.000	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF688	HGNC	ENSG00000229809				51	0	0	32	20	38.4615
ZNF646	0	genome.wustl.edu	37	16	31091327	31091327	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	31091327	31091327	G	A	SNP	ZNF646	ENST00000300850	human	ensembl	74_37	+1	known	missense	c.3682	p.G1228S	0.999	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395				37	0	0	32	12	27.2727
TGFB1I1	0	genome.wustl.edu	37	16	31485172	31485172	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	31485172	31485172	C	T	SNP	TGFB1I1	ENST00000394863	human	ensembl	74_37	+1	known	missense	c.199	p.R67W	1.000	pirsf_Leupaxin	pfam_Znf_LIM,smart_Znf_LIM,pirsf_Leupaxin,pfscan_Znf_LIM	-	no_errors	TGFB1I1	HGNC	ENSG00000140682				147	1	0.675676	95	26	21.4876
ENSG00000259966	0	genome.wustl.edu	37	16	32617037	32617037	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	32617037	32617037	T	C	SNP	ENSG00000259966	ENST00000562976	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.000	-	-	-	no_errors	RP11-652G5.1	Clone_based_vega_gene	ENSG00000259966				50	0	0	15	31	67.3913
LINC00273	0	genome.wustl.edu	37	16	33961713	33961713	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	33961713	33961713	C	T	SNP	LINC00273	ENST00000539813	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	LINC00273	HGNC	ENSG00000256642				16	0	0	13	4	23.5294
AXIN1	0	genome.wustl.edu	37	16	396381	396381	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	396381	396381	C	T	SNP	AXIN1	ENST00000262320	human	ensembl	74_37	-1	known	silent	c.645	p.S215	0.854	superfamily_Regulat_G_prot_signal_superfam	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN1	HGNC	ENSG00000103126				119	0	0	49	39	44.3182
ADCY9	0	genome.wustl.edu	37	16	4164837	4164837	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	4164837	4164837	C	T	SNP	ADCY9	ENST00000294016	human	ensembl	74_37	-1	known	missense	c.607	p.D203N	0.995	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY9	HGNC	ENSG00000162104				74	0	0	51	33	39.2857
GLIS2	0	genome.wustl.edu	37	16	4386992	4386992	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	4386992	4386992	G	A	SNP	GLIS2	ENST00000262366	human	ensembl	74_37	+1	known	missense	c.1042	p.V348I	0.995	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS2	HGNC	ENSG00000126603				18	0	0	8	7	46.6667
KATNB1	0	genome.wustl.edu	37	16	57789031	57789031	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	57789031	57789031	C	T	SNP	KATNB1	ENST00000379661	human	ensembl	74_37	+1	known	silent	c.1297	p.L433	0.118	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	KATNB1	HGNC	ENSG00000140854				48	0	0	37	13	26
KIFC3	0	genome.wustl.edu	37	16	57798091	57798091	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	57798091	57798091	G	A	SNP	KIFC3	ENST00000379655	human	ensembl	74_37	-1	known	silent	c.1581	p.Y527	0.024	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIFC3	HGNC	ENSG00000140859				59	0	0	33	23	41.0714
CDH16	0	genome.wustl.edu	37	16	66949216	66949216	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	66949216	66949216	G	A	SNP	CDH16	ENST00000299752	human	ensembl	74_37	-1	known	nonsense	c.490	p.R164*	0.996	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH16	HGNC	ENSG00000166589				71	0	0	38	25	39.6825
TERF2	0	genome.wustl.edu	37	16	69400774	69400774	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	69400774	69400774	C	T	SNP	TERF2	ENST00000254942	human	ensembl	74_37	-1	known	missense	c.1276	p.A426T	0.000	pirsf_Telomere_repeat-bd-1/2	pfam_Telomere_rpt-bd_fac_dimer_dom,pfam_SANT/Myb,superfamily_Telomere_rpt-bd_fac_dimer_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Telomere_repeat-bd-1/2,pfscan_Myb-like_dom	-	no_errors	TERF2	HGNC	ENSG00000132604				40	0	0	30	12	28.5714
WDR90	0	genome.wustl.edu	37	16	700674	700674	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	700674	700674	G	T	SNP	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	missense	c.524	p.R175M	0.965	pfam_DUF667	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996				78	0	0	29	22	43.1373
HYDIN	0	genome.wustl.edu	37	16	70841641	70841641	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	70841641	70841641	G	A	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.15208	p.R5070W	0.992	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				128	0	0	70	38	35.1852
TAT	0	genome.wustl.edu	37	16	71602123	71602123	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	71602123	71602123	G	A	SNP	TAT	ENST00000355962	human	ensembl	74_37	-1	known	missense	c.1289	p.A430V	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,pirsf_Tyrosine_transaminase,tigrfam_Tyrosine_aminoTrfase,tigrfam_TyrNic_aminoTrfase	pfam_Aminotransferase_I/II,pfam_Tyr_aminoTrfase_ubiquitination,pfam_ArAA_b-elim_lyase/Thr_aldolase,pfam_Aminotrans_V/Cys_dSase,pfam_DegT/StrS_aminotransferase,superfamily_PyrdxlP-dep_Trfase,pirsf_Tyrosine_transaminase,tigrfam_Tyrosine_aminoTrfase,tigrfam_TyrNic_aminoTrfase	-	no_errors	TAT	HGNC	ENSG00000198650				66	0	0	28	26	48.1481
GLG1	0	genome.wustl.edu	37	16	74496029	74496029	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	74496029	74496029	C	T	SNP	GLG1	ENST00000205061	human	ensembl	74_37	-1	known	missense	c.2999	p.R1000H	1.000	pfam_Cys-rich_GLG1_repeat	pfam_Cys-rich_GLG1_repeat	-	no_errors	GLG1	HGNC	ENSG00000090863				80	0	0	40	11	21.5686
GLG1	0	genome.wustl.edu	37	16	74519764	74519764	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	74519764	74519764	G	A	SNP	GLG1	ENST00000205061	human	ensembl	74_37	-1	known	nonsense	c.1501	p.R501*	1.000	pfam_Cys-rich_GLG1_repeat	pfam_Cys-rich_GLG1_repeat	-	no_errors	GLG1	HGNC	ENSG00000090863				92	0	0	62	40	39.2157
HAGHL	0	genome.wustl.edu	37	16	784610	784610	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	784610	784610	A	G	SNP	HAGHL	ENST00000569604	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	HAGHL	HGNC	ENSG00000103253				50	0	0	20	10	33.3333
TAF1C	0	genome.wustl.edu	37	16	84215812	84215812	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	84215812	84215812	C	T	SNP	TAF1C	ENST00000378541	human	ensembl	74_37	-1	known	silent	c.717	p.R239	0.010	NULL	superfamily_WD40_repeat_dom	-	no_errors	TAF1C	HGNC	ENSG00000103168				74	0	0	33	25	43.1034
KCNG4	0	genome.wustl.edu	37	16	84256129	84256129	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	84256129	84256129	C	T	SNP	KCNG4	ENST00000308251	human	ensembl	74_37	-1	known	silent	c.1254	p.T418	0.625	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG4	HGNC	ENSG00000168418				82	0	0	44	12	21.4286
CHTF18	0	genome.wustl.edu	37	16	844043	844043	+	RNA	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	844043	844043	C	A	SNP	CHTF18	ENST00000461268	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CHTF18	HGNC	ENSG00000127586				70	0	0	39	24	38.0952
SPG7	0	genome.wustl.edu	37	16	89623525	89623525	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	89623525	89623525	C	T	SNP	SPG7	ENST00000565891	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPG7	HGNC	ENSG00000197912				20	0	0	16	5	23.8095
TUBB3	0	genome.wustl.edu	37	16	90001915	90001915	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	90001915	90001915	C	T	SNP	TUBB3	ENST00000315491	human	ensembl	74_37	+1	known	silent	c.1056	p.A352	0.949	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB3	Uniprot_gn	ENSG00000258947				248	0	0	137	77	35.9813
MYH3	0	genome.wustl.edu	37	17	10538325	10538325	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	10538325	10538325	C	T	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	silent	c.4188	p.Q1396	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063				121	0	0	47	22	31.8841
MYH3	0	genome.wustl.edu	37	17	10541627	10541627	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	10541627	10541627	C	T	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	silent	c.3462	p.A1154	0.012	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063				75	0	0	37	24	39.3443
ELAC2	0	genome.wustl.edu	37	17	12897751	12897751	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	12897751	12897751	T	G	SNP	ELAC2	ENST00000338034	human	ensembl	74_37	-1	known	missense	c.2099	p.K700T	1.000	NULL	pfam_Beta-lactamas-like	-	no_errors	ELAC2	HGNC	ENSG00000006744				330	0	0	229	21	8.4
TEKT3	0	genome.wustl.edu	37	17	15217493	15217493	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	15217493	15217493	C	T	SNP	TEKT3	ENST00000338696	human	ensembl	74_37	-1	known	silent	c.789	p.T263	0.000	pfam_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT3	HGNC	ENSG00000125409				60	0	0	29	13	30.9524
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				75	0	0	62	4	6.06061
ZNF624	0	genome.wustl.edu	37	17	16550695	16550695	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	16550695	16550695	G	A	SNP	ZNF624	ENST00000311331	human	ensembl	74_37	-1	known	missense	c.101	p.T34I	0.940	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF624	HGNC	ENSG00000197566				134	0	0	78	36	31.5789
NT5M	0	genome.wustl.edu	37	17	17209922	17209922	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	17209922	17209922	C	T	SNP	NT5M	ENST00000389022	human	ensembl	74_37	+1	known	silent	c.333	p.A111	0.474	pfam_5'(3')-deoxyribonucleotidase,superfamily_HAD-like_dom	pfam_5'(3')-deoxyribonucleotidase,superfamily_HAD-like_dom	-	no_errors	NT5M	HGNC	ENSG00000205309				153	0	0	103	43	29.4521
MYO15A	0	genome.wustl.edu	37	17	18023025	18023025	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	18023025	18023025	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.911	p.T304I	0.000	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				134	0	0	88	34	27.8689
MYO15A	0	genome.wustl.edu	37	17	18045519	18045519	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	18045519	18045519	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.5776	p.R1926C	1.000	superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				37	0	0	23	9	28.125
SMCR8	0	genome.wustl.edu	37	17	18219551	18219551	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	18219551	18219551	G	A	SNP	SMCR8	ENST00000406438	human	ensembl	74_37	+1	known	missense	c.448	p.V150M	1.000	pfam_Folliculin	pfam_Folliculin	-	no_errors	SMCR8	HGNC	ENSG00000176994				114	0	0	62	39	38.6139
SMCR8	0	genome.wustl.edu	37	17	18225952	18225952	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	18225952	18225952	C	T	SNP	SMCR8	ENST00000406438	human	ensembl	74_37	+1	known	silent	c.2382	p.A794	0.005	NULL	pfam_Folliculin	-	no_errors	SMCR8	HGNC	ENSG00000176994				81	0	0	65	16	19.7531
SMG6	0	genome.wustl.edu	37	17	2203754	2203754	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	2203754	2203754	C	T	SNP	SMG6	ENST00000263073	human	ensembl	74_37	-1	known	missense	c.293	p.C98Y	0.982	NULL	pfam_EST1,smart_PIN_dom	-	no_errors	SMG6	HGNC	ENSG00000070366				245	0	0	130	56	30.1075
KSR1	0	genome.wustl.edu	37	17	25877651	25877651	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	25877651	25877651	G	C	SNP	KSR1	ENST00000319524	human	ensembl	74_37	+1	known	missense	c.289	p.G97R	0.008	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	KSR1	HGNC	ENSG00000141068				161	0	0	85	39	31.4516
TNFAIP1	0	genome.wustl.edu	37	17	26671481	26671481	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	26671481	26671481	C	T	SNP	TNFAIP1	ENST00000226225	human	ensembl	74_37	+1	known	missense	c.806	p.A269V	1.000	NULL	pfam_T1-type_BTB,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	TNFAIP1	HGNC	ENSG00000109079				71	0	0	34	16	32
NEK8	0	genome.wustl.edu	37	17	27064710	27064710	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	27064710	27064710	C	T	SNP	NEK8	ENST00000268766	human	ensembl	74_37	+1	known	missense	c.845	p.A282V	0.850	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_RCC1/BLIP-II,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_dom,prints_Reg_chr_condens,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK8	HGNC	ENSG00000160602				95	0	0	62	32	34.0426
NEK8	0	genome.wustl.edu	37	17	27068189	27068189	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	27068189	27068189	G	A	SNP	NEK8	ENST00000268766	human	ensembl	74_37	+1	known	missense	c.1826	p.G609D	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Prot_kinase_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_RCC1/BLIP-II,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_dom,prints_Reg_chr_condens,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK8	HGNC	ENSG00000160602				104	0	0	53	28	34.5679
NF1	0	genome.wustl.edu	37	17	29509634	29509634	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	29509634	29509634	T	C	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	missense	c.839	p.I280T	1.000	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712				30	0	0	16	8	33.3333
SH3GL1P1	0	genome.wustl.edu	37	17	30367429	30367429	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	30367429	30367429	C	T	SNP	SH3GL1P1	ENST00000582640	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SH3GL1P1	HGNC	ENSG00000266777				11	0	0	13	11	45.8333
TRPV3	0	genome.wustl.edu	37	17	3431416	3431416	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	3431416	3431416	A	G	SNP	TRPV3	ENST00000301365	human	ensembl	74_37	-1	known	missense	c.1406	p.I469T	0.515	prints_TRPV1-4_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	-	no_errors	TRPV3	HGNC	ENSG00000167723				26	0	0	13	15	53.5714
CTNS	0	genome.wustl.edu	37	17	3558639	3558639	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	3558639	3558639	C	T	SNP	CTNS	ENST00000381870	human	ensembl	74_37	+1	known	missense	c.454	p.R152W	1.000	smart_CTNS,tigrfam_LC_transporter	smart_CTNS,tigrfam_LC_transporter	-	no_errors	CTNS	HGNC	ENSG00000040531				218	0	0	105	46	30.4636
FBXO47	0	genome.wustl.edu	37	17	37107906	37107906	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	37107906	37107906	G	A	SNP	FBXO47	ENST00000378079	human	ensembl	74_37	-1	known	missense	c.544	p.R182C	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO47	HGNC	ENSG00000204952				59	0	0	33	17	34
KRT34	0	genome.wustl.edu	37	17	39534393	39534393	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	39534393	39534393	G	T	SNP	KRT34	ENST00000394001	human	ensembl	74_37	-1	known	missense	c.1229	p.P410H	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT34	HGNC	ENSG00000131737				38	0	0	23	7	23.3333
KRT35	0	genome.wustl.edu	37	17	39633363	39633363	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	39633363	39633363	C	T	SNP	KRT35	ENST00000393989	human	ensembl	74_37	-1	known	missense	c.1313	p.R438H	0.017	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT35	HGNC	ENSG00000197079				72	0	0	41	15	26.7857
ZZEF1	0	genome.wustl.edu	37	17	3974038	3974038	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	3974038	3974038	C	T	SNP	ZZEF1	ENST00000381638	human	ensembl	74_37	-1	known	missense	c.4015	p.A1339T	1.000	NULL	pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_CUB_dom,smart_EF_hand_dom,smart_Znf_ZZ,pfscan_EF_hand_dom,pfscan_Znf_ZZ	-	no_errors	ZZEF1	HGNC	ENSG00000074755				132	0	0	71	48	40.3361
KLHL10	0	genome.wustl.edu	37	17	39994136	39994136	+	RNA	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	39994136	39994136	C	A	SNP	KLHL10	ENST00000485613	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.980	-	-	-	no_errors	KLHL10	HGNC	ENSG00000161594				80	0	0	44	26	37.1429
CCR10	0	genome.wustl.edu	37	17	40832555	40832555	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	40832555	40832555	A	G	SNP	CCR10	ENST00000332438	human	ensembl	74_37	-1	known	silent	c.105	p.D35	0.709	prints_Chemokine_CCR10,prints_Chemokine_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR10,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt	-	no_errors	CCR10	HGNC	ENSG00000184451				47	0	0	23	18	43.9024
BRCA1	0	genome.wustl.edu	37	17	41243800	41243800	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	41243800	41243800	C	T	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.3748	p.E1250K	0.001	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048				141	0	0	93	36	27.907
C1QL1	0	genome.wustl.edu	37	17	43045010	43045010	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	43045010	43045010	A	C	SNP	C1QL1	ENST00000253407	human	ensembl	74_37	-1	known	missense	c.407	p.L136R	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QL1	HGNC	ENSG00000131094				91	0	0	53	34	39.0805
NMT1	0	genome.wustl.edu	37	17	43174504	43174504	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	43174504	43174504	G	A	SNP	NMT1	ENST00000258960	human	ensembl	74_37	+1	known	missense	c.605	p.R202Q	1.000	pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	pfam_MyristoylCoA_TrFase_C,pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	-	no_errors	NMT1	HGNC	ENSG00000136448				184	0	0	79	44	35.7724
CRHR1	0	genome.wustl.edu	37	17	43907506	43907506	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	43907506	43907506	G	A	SNP	CRHR1	ENST00000398285	human	ensembl	74_37	+1	known	missense	c.568	p.A190T	0.998	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF1_rcpt,prints_GPCR_2_diuretic_rcpt	-	no_errors	CRHR1	HGNC	ENSG00000120088				129	0	0	44	35	44.3038
CBX1	0	genome.wustl.edu	37	17	46154279	46154279	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	46154279	46154279	G	A	SNP	CBX1	ENST00000225603	human	ensembl	74_37	-1	known	nonsense	c.88	p.R30*	1.000	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_Chromo_shadow_dom,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Chromo_shadow_dom,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX1	HGNC	ENSG00000108468				137	0	0	76	29	27.619
SNX11	0	genome.wustl.edu	37	17	46196139	46196139	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	46196139	46196139	G	A	SNP	SNX11	ENST00000359238	human	ensembl	74_37	+1	known	missense	c.304	p.G102S	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX11	HGNC	ENSG00000002919				68	0	0	32	19	37.2549
XYLT2	0	genome.wustl.edu	37	17	48437479	48437479	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	48437479	48437479	G	A	SNP	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	missense	c.2425	p.E809K	0.828	NULL	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532				68	0	0	25	13	34.2105
SPATA20	0	genome.wustl.edu	37	17	48629529	48629529	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	48629529	48629529	C	T	SNP	SPATA20	ENST00000006658	human	ensembl	74_37	+1	known	missense	c.1945	p.R649C	0.998	superfamily_6-hairpin_glycosidase-like	pfam_DUF255,pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like,superfamily_Thioredoxin-like_fold	-	no_errors	SPATA20	HGNC	ENSG00000006282				32	0	0	25	13	34.2105
CAMTA2	0	genome.wustl.edu	37	17	4885435	4885435	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	4885435	4885435	A	G	SNP	CAMTA2	ENST00000573004	human	ensembl	74_37	-1	known	missense	c.433	p.S145P	1.000	NULL	pfam_CG-1_dom	-	no_errors	CAMTA2	HGNC	ENSG00000108509				168	0	0	67	32	32.3232
OR4D2	0	genome.wustl.edu	37	17	56247306	56247306	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	56247306	56247306	G	A	SNP	OR4D2	ENST00000545221	human	ensembl	74_37	+1	known	missense	c.290	p.C97Y	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D2	HGNC	ENSG00000255713				119	0	0	81	35	30.1724
BZRAP1	0	genome.wustl.edu	37	17	56386607	56386607	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	56386607	56386607	G	A	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	silent	c.4026	p.D1342	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379				57	0	0	37	35	48.6111
APPBP2	0	genome.wustl.edu	37	17	58539529	58539529	+	RNA	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	58539529	58539529	T	C	SNP	APPBP2	ENST00000592995	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	APPBP2	HGNC	ENSG00000062725				22	0	0	16	6	27.2727
GH2	0	genome.wustl.edu	37	17	61958199	61958199	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	61958199	61958199	C	T	SNP	GH2	ENST00000332800	human	ensembl	74_37	-1	known	missense	c.389	p.G130D	0.906	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	GH2	HGNC	ENSG00000136487				144	0	0	60	41	40.5941
CEP95	0	genome.wustl.edu	37	17	62523312	62523312	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	62523312	62523312	T	G	SNP	CEP95	ENST00000556440	human	ensembl	74_37	+1	known	missense	c.1236	p.D412E	0.005	NULL	superfamily_CH-domain	-	no_errors	CEP95	HGNC	ENSG00000258890				39	0	0	28	13	31.7073
SOX9	0	genome.wustl.edu	37	17	70120416	70120416	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	70120416	70120416	A	G	SNP	SOX9	ENST00000245479	human	ensembl	74_37	+1	known	missense	c.1418	p.Q473R	1.000	NULL	pfam_Sox_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX9	HGNC	ENSG00000125398				100	0	0	73	35	32.4074
ACADVL	0	genome.wustl.edu	37	17	7127562	7127562	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	7127562	7127562	G	A	SNP	ACADVL	ENST00000356839	human	ensembl	74_37	+1	known	missense	c.1532	p.R511Q	1.000	NULL	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACADVL	HGNC	ENSG00000072778				42	0	0	32	11	25.5814
GALR2	0	genome.wustl.edu	37	17	74073226	74073226	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	74073226	74073226	C	T	SNP	GALR2	ENST00000329003	human	ensembl	74_37	+1	known	missense	c.878	p.A293V	0.987	pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Galanin_rcpt,prints_GAL2_rcpt	-	no_errors	GALR2	HGNC	ENSG00000182687				31	0	0	17	20	54.0541
QRICH2	0	genome.wustl.edu	37	17	74272799	74272799	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	74272799	74272799	C	T	SNP	QRICH2	ENST00000262765	human	ensembl	74_37	-1	known	missense	c.4817	p.R1606Q	1.000	NULL	NULL	-	no_errors	QRICH2	HGNC	ENSG00000129646				100	0	0	50	18	26.4706
UBE2O	0	genome.wustl.edu	37	17	74395743	74395743	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	74395743	74395743	C	A	SNP	UBE2O	ENST00000319380	human	ensembl	74_37	-1	known	missense	c.1415	p.R472M	0.880	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931				92	0	0	75	4	5.06329
UBE2O	0	genome.wustl.edu	37	17	74396252	74396252	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	74396252	74396252	C	T	SNP	UBE2O	ENST00000319380	human	ensembl	74_37	-1	known	silent	c.1131	p.Q377	1.000	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931				85	0	0	60	18	23.0769
SEPT9	0	genome.wustl.edu	37	17	75484868	75484868	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	75484868	75484868	T	A	SNP	SEPT9	ENST00000427177	human	ensembl	74_37	+1	known	missense	c.1184	p.V395D	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	SEPT9	HGNC	ENSG00000184640				89	0	0	65	14	17.7215
CCDC40	0	genome.wustl.edu	37	17	78021186	78021186	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	78021186	78021186	G	A	SNP	CCDC40	ENST00000397545	human	ensembl	74_37	+1	known	missense	c.661	p.V221I	0.000	NULL	pfam_E3_ubiquit_lig_BRE1	-	no_errors	CCDC40	HGNC	ENSG00000141519				37	0	0	12	6	33.3333
RNF213	0	genome.wustl.edu	37	17	78341576	78341576	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	78341576	78341576	C	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.11900	p.T3967M	0.972	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821				93	0	0	42	26	38.2353
ARL16	0	genome.wustl.edu	37	17	79649138	79649138	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	79649138	79649138	G	A	SNP	ARL16	ENST00000397498	human	ensembl	74_37	-1	known	silent	c.348	p.S116	0.999	pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1	pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1	-	no_errors	ARL16	HGNC	ENSG00000214087				26	0	0	20	7	25.9259
ALOX12B	0	genome.wustl.edu	37	17	7979592	7979592	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	7979592	7979592	C	T	SNP	ALOX12B	ENST00000319144	human	ensembl	74_37	-1	known	missense	c.1433	p.S478N	0.003	pfam_LipOase_C,superfamily_LipOase_C,prints_LipOase_mml	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477				34	0	0	17	15	46.875
FASN	0	genome.wustl.edu	37	17	80044378	80044378	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	80044378	80044378	G	A	SNP	FASN	ENST00000306749	human	ensembl	74_37	-1	known	missense	c.3484	p.P1162S	0.995	NULL	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710				63	0	0	30	13	30.2326
FASN	0	genome.wustl.edu	37	17	80046321	80046321	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	80046321	80046321	G	A	SNP	FASN	ENST00000306749	human	ensembl	74_37	-1	known	silent	c.2538	p.A846	0.000	smart_PKS_dehydratase	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710				36	0	0	33	15	31.25
FN3K	0	genome.wustl.edu	37	17	80708494	80708494	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	80708494	80708494	C	T	SNP	FN3K	ENST00000300784	human	ensembl	74_37	+1	known	missense	c.793	p.R265W	0.938	pfam_Fructo-/Ketosamine-3-kinase,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,pirsf_Fructo-/Ketosamine-3-kinase	pfam_Fructo-/Ketosamine-3-kinase,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,pirsf_Fructo-/Ketosamine-3-kinase	-	no_errors	FN3K	HGNC	ENSG00000167363				268	1	0.371747	159	71	30.8696
C17orf59	0	genome.wustl.edu	37	17	8093038	8093038	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	8093038	8093038	C	G	SNP	C17orf59	ENST00000389017	human	ensembl	74_37	-1	known	missense	c.421	p.E141Q	0.094	NULL	pfam_DUF2365	-	no_errors	C17orf59	HGNC	ENSG00000196544				52	0	0	27	17	38.6364
MPPE1	0	genome.wustl.edu	37	18	11884395	11884395	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	11884395	11884395	C	T	SNP	MPPE1	ENST00000592755	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	MPPE1	HGNC	ENSG00000154889				55	0	0	38	15	28.3019
SLC14A2	0	genome.wustl.edu	37	18	43207048	43207048	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	43207048	43207048	A	G	SNP	SLC14A2	ENST00000255226	human	ensembl	74_37	+1	known	missense	c.457	p.T153A	1.000	pfam_Urea_transporter	pfam_Urea_transporter	-	no_errors	SLC14A2	HGNC	ENSG00000132874				191	1	0.520833	132	23	14.8387
SMAD2	0	genome.wustl.edu	37	18	45395727	45395727	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	45395727	45395727	T	A	SNP	SMAD2	ENST00000262160	human	ensembl	74_37	-1	known	missense	c.407	p.D136V	1.000	pfam_MAD_homology1_Dwarfin-type,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,pfscan_MAD_homology_MH1	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD2	HGNC	ENSG00000175387				41	0	0	33	15	31.25
NEDD4L	0	genome.wustl.edu	37	18	56002750	56002750	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	56002750	56002750	C	T	SNP	NEDD4L	ENST00000400345	human	ensembl	74_37	+1	known	missense	c.1106	p.T369M	1.000	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom,prints_C2_dom	-	no_errors	NEDD4L	HGNC	ENSG00000049759				92	0	0	46	22	32.3529
SERPINB8	0	genome.wustl.edu	37	18	61654234	61654234	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	61654234	61654234	C	A	SNP	SERPINB8	ENST00000353706	human	ensembl	74_37	+1	known	missense	c.847	p.L283I	0.962	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB8	HGNC	ENSG00000166401				103	0	0	55	21	27.6316
LAMA1	0	genome.wustl.edu	37	18	7043243	7043243	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	7043243	7043243	A	G	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.1138	p.Y380H	1.000	pfam_EGF_laminin,smart_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				232	0	0	171	14	7.56757
ZNF516	0	genome.wustl.edu	37	18	74153390	74153390	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	74153390	74153390	G	A	SNP	ZNF516	ENST00000443185	human	ensembl	74_37	-1	known	missense	c.1621	p.R541C	0.002	pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF516	HGNC	ENSG00000101493				27	0	0	13	4	23.5294
ZNF236	0	genome.wustl.edu	37	18	74606996	74606996	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	74606996	74606996	G	A	SNP	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	missense	c.1439	p.R480H	0.705	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856				182	0	0	94	55	36.9128
PTPRM	0	genome.wustl.edu	37	18	8113519	8113519	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	8113519	8113519	G	A	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	missense	c.1892	p.R631Q	1.000	smart_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482				58	0	0	40	27	40.2985
SOGA2	0	genome.wustl.edu	37	18	8825585	8825585	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	8825585	8825585	G	A	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	silent	c.4077	p.S1359	0.066	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				58	0	0	15	11	42.3077
COL5A3	0	genome.wustl.edu	37	19	10078753	10078753	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	10078753	10078753	A	G	SNP	COL5A3	ENST00000264828	human	ensembl	74_37	-1	known	silent	c.4317	p.G1439	0.375	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC	ENSG00000080573				81	0	0	46	22	32.3529
PPAN-P2RY11	0	genome.wustl.edu	37	19	10224725	10224725	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	10224725	10224725	G	A	SNP	PPAN-P2RY11	ENST00000393796	human	ensembl	74_37	+1	known	missense	c.1696	p.A566T	1.000	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_Brix,pfam_GPCR_Rhodpsn,superfamily_Anticodon-bd,smart_Brix,prints_GPCR_Rhodpsn,pfscan_Brix,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	PPAN-P2RY11	HGNC	ENSG00000243207				61	0	0	41	20	32.7869
MRPL4	0	genome.wustl.edu	37	19	10368989	10368989	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	10368989	10368989	C	T	SNP	MRPL4	ENST00000253099	human	ensembl	74_37	+1	known	silent	c.537	p.T179	0.038	pfam_Ribosomal_L4/L1e,superfamily_Ribosomal_L4_dom,tigrfam_Ribosomal_L4/L1e_bac-type	pfam_Ribosomal_L4/L1e,superfamily_Ribosomal_L4_dom,tigrfam_Ribosomal_L4/L1e_bac-type	-	no_errors	MRPL4	HGNC	ENSG00000105364				53	0	0	34	18	34.6154
ICAM5	0	genome.wustl.edu	37	19	10404979	10404979	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	10404979	10404979	G	A	SNP	ICAM5	ENST00000221980	human	ensembl	74_37	+1	known	missense	c.1975	p.V659I	0.078	smart_Ig_sub	pfam_Ig_I-set,pfam_ICAM_N,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM5	HGNC	ENSG00000105376				265	0	0	170	81	32.2709
DOCK6	0	genome.wustl.edu	37	19	11323941	11323941	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	11323941	11323941	G	A	SNP	DOCK6	ENST00000294618	human	ensembl	74_37	-1	known	nonsense	c.4402	p.R1468*	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N	-	no_errors	DOCK6	HGNC	ENSG00000130158				51	0	0	29	16	35.5556
ACP5	0	genome.wustl.edu	37	19	11687262	11687262	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	11687262	11687262	G	A	SNP	ACP5	ENST00000218758	human	ensembl	74_37	-1	known	silent	c.531	p.D177	0.001	pfam_PEstase_dom	pfam_PEstase_dom	-	no_errors	ACP5	HGNC	ENSG00000102575				58	0	0	43	20	31.746
ZNF439	0	genome.wustl.edu	37	19	11979027	11979027	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	11979027	11979027	G	A	SNP	ZNF439	ENST00000304030	human	ensembl	74_37	+1	known	silent	c.1143	p.P381	0.354	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF439	HGNC	ENSG00000171291				65	0	0	25	29	53.7037
ZNF791	0	genome.wustl.edu	37	19	12739129	12739129	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	12739129	12739129	C	T	SNP	ZNF791	ENST00000343325	human	ensembl	74_37	+1	known	silent	c.786	p.H262	0.659	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF791	HGNC	ENSG00000173875				56	0	0	35	20	36.3636
TNPO2	0	genome.wustl.edu	37	19	12813689	12813689	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	12813689	12813689	C	T	SNP	TNPO2	ENST00000425528	human	ensembl	74_37	-1	known	silent	c.2253	p.L751	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	TNPO2	HGNC	ENSG00000105576				255	0	0	161	31	16.1458
CACNA1A	0	genome.wustl.edu	37	19	13397765	13397765	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	13397765	13397765	G	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.3105	p.S1035	0.092	prints_VDCC_P/Q_a1su	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				47	0	0	22	12	35.2941
MBD3	0	genome.wustl.edu	37	19	1581156	1581156	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	1581156	1581156	G	A	SNP	MBD3	ENST00000156825	human	ensembl	74_37	-1	known	silent	c.612	p.P204	0.036	superfamily_ARM-type_fold	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD3	HGNC	ENSG00000071655				58	0	0	38	10	20.8333
CYP4F11	0	genome.wustl.edu	37	19	16024639	16024639	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	16024639	16024639	G	A	SNP	CYP4F11	ENST00000248041	human	ensembl	74_37	-1	known	missense	c.1478	p.P493L	0.946	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F11	HGNC	ENSG00000171903				52	0	0	36	3	7.69231
TCF3	0	genome.wustl.edu	37	19	1627405	1627405	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	1627405	1627405	C	T	SNP	TCF3	ENST00000262965	human	ensembl	74_37	-1	known	missense	c.319	p.A107T	0.002	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TCF3	HGNC	ENSG00000071564				24	0	0	19	5	20.8333
C19orf44	0	genome.wustl.edu	37	19	16613907	16613907	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	16613907	16613907	C	A	SNP	C19orf44	ENST00000221671	human	ensembl	74_37	+1	known	missense	c.791	p.P264H	0.001	NULL	NULL	-	no_errors	C19orf44	HGNC	ENSG00000105072				96	0	0	63	19	23.1707
MED26	0	genome.wustl.edu	37	19	16688494	16688494	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	16688494	16688494	C	T	SNP	MED26	ENST00000263390	human	ensembl	74_37	-1	known	splice_site	c.148-1	e3-1	1.000	-	-	-	no_errors	MED26	HGNC	ENSG00000105085				70	0	0	39	24	38.0952
ANO8	0	genome.wustl.edu	37	19	17441906	17441906	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	17441906	17441906	C	A	SNP	ANO8	ENST00000159087	human	ensembl	74_37	-1	known	missense	c.822	p.E274D	0.780	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO8	HGNC	ENSG00000074855				89	0	0	76	27	26.2136
SLC27A1	0	genome.wustl.edu	37	19	17611178	17611178	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	17611178	17611178	G	A	SNP	SLC27A1	ENST00000252595	human	ensembl	74_37	+1	known	missense	c.1298	p.R433Q	0.999	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A1	HGNC	ENSG00000130304				84	0	0	45	15	25
TMEM161A	0	genome.wustl.edu	37	19	19245695	19245695	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	19245695	19245695	G	A	SNP	TMEM161A	ENST00000162044	human	ensembl	74_37	-1	known	missense	c.5	p.A2V	0.998	pfam_Transmembrane_161A/B	pfam_Transmembrane_161A/B	-	no_errors	TMEM161A	HGNC	ENSG00000064545				13	0	0	5	5	50
ZNF100	0	genome.wustl.edu	37	19	21948556	21948556	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	21948556	21948556	C	A	SNP	ZNF100	ENST00000358296	human	ensembl	74_37	-1	known	missense	c.36	p.K12N	0.005	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF100	HGNC	ENSG00000197020				123	0	0	69	27	28.125
ZNF99	0	genome.wustl.edu	37	19	22940057	22940057	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	22940057	22940057	G	T	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	silent	c.2274	p.S758	0.017	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973				42	0	0	40	16	28.5714
TSHZ3	0	genome.wustl.edu	37	19	31769223	31769223	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	31769223	31769223	G	A	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	silent	c.1476	p.G492	0.003	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297				337	0	0	131	71	35.1485
PDCD5	0	genome.wustl.edu	37	19	33076813	33076813	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	33076813	33076813	G	T	SNP	PDCD5	ENST00000590247	human	ensembl	74_37	+1	known	missense	c.258	p.K86N	1.000	pfam_PDCD5-related,superfamily_PDCD5-related,pirsf_PDCD5-related	pfam_PDCD5-related,superfamily_PDCD5-related,pirsf_PDCD5-related	-	no_errors	PDCD5	HGNC	ENSG00000105185				87	0	0	46	15	24.5902
UBA2	0	genome.wustl.edu	37	19	34922769	34922769	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	34922769	34922769	G	A	SNP	UBA2	ENST00000246548	human	ensembl	74_37	+1	known	missense	c.226	p.A76T	1.000	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB	pfam_ThiF_NAD_FAD-bd,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB	-	no_errors	UBA2	HGNC	ENSG00000126261				157	0	0	72	36	33.3333
MFSD12	0	genome.wustl.edu	37	19	3547998	3547998	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	3547998	3547998	C	T	SNP	MFSD12	ENST00000398558	human	ensembl	74_37	-1	known	missense	c.685	p.A229T	0.904	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD12	HGNC	ENSG00000161091				58	0	0	18	19	51.3514
KMT2B	0	genome.wustl.edu	37	19	36215971	36215971	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	36215971	36215971	G	A	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	missense	c.3511	p.V1171I	0.953	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				69	0	0	49	5	9.25926
KMT2B	0	genome.wustl.edu	37	19	36218423	36218423	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	36218423	36218423	G	A	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	nonsense	c.4202	p.W1401*	1.000	pirsf_MeTrfase_trithorax,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				132	0	0	76	36	32.1429
KMT2B	0	genome.wustl.edu	37	19	36228995	36228995	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	36228995	36228995	A	G	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	missense	c.7775	p.K2592R	1.000	pirsf_MeTrfase_trithorax,pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				62	0	0	29	8	21.6216
LRFN3	0	genome.wustl.edu	37	19	36430697	36430697	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	36430697	36430697	G	A	SNP	LRFN3	ENST00000246529	human	ensembl	74_37	+1	known	missense	c.370	p.E124K	0.979	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN3	HGNC	ENSG00000126243				45	0	0	29	24	45.283
HKR1	0	genome.wustl.edu	37	19	37854267	37854267	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	37854267	37854267	C	T	SNP	HKR1	ENST00000324411	human	ensembl	74_37	+1	known	missense	c.1570	p.P524S	0.998	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	HKR1	HGNC	ENSG00000181666				82	0	0	54	26	32.5
SIPA1L3	0	genome.wustl.edu	37	19	38573387	38573387	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	38573387	38573387	C	T	SNP	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	silent	c.1182	p.G394	0.779	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738				79	0	0	31	29	48.3333
CATSPERG	0	genome.wustl.edu	37	19	38850136	38850136	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	38850136	38850136	T	G	SNP	CATSPERG	ENST00000409235	human	ensembl	74_37	+1	known	missense	c.1523	p.L508R	1.000	NULL	NULL	-	no_errors	CATSPERG	HGNC	ENSG00000099338				62	0	0	25	7	21.875
RYR1	0	genome.wustl.edu	37	19	38948905	38948905	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	38948905	38948905	G	A	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.2140	p.G714S	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				176	0	0	96	49	33.7931
ACTN4	0	genome.wustl.edu	37	19	39219655	39219655	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	39219655	39219655	G	A	SNP	ACTN4	ENST00000252699	human	ensembl	74_37	+1	known	missense	c.2438	p.R813H	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN4	HGNC	ENSG00000130402				140	1	0.70922	74	34	31.4815
PLEKHG2	0	genome.wustl.edu	37	19	39914135	39914135	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	39914135	39914135	C	T	SNP	PLEKHG2	ENST00000409794	human	ensembl	74_37	+1	known	missense	c.2441	p.A814V	0.206	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG2	HGNC	ENSG00000090924				17	0	0	14	12	46.1538
PRX	0	genome.wustl.edu	37	19	40899951	40899951	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	40899951	40899951	C	T	SNP	PRX	ENST00000324001	human	ensembl	74_37	-1	known	silent	c.4308	p.R1436	0.998	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PRX	HGNC	ENSG00000105227				86	0	0	61	25	29.0698
AXL	0	genome.wustl.edu	37	19	41749584	41749584	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	41749584	41749584	C	A	SNP	AXL	ENST00000301178	human	ensembl	74_37	+1	known	silent	c.1509	p.S503	0.999	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AXL	HGNC	ENSG00000167601				151	0	0	74	30	28.8462
CCDC97	0	genome.wustl.edu	37	19	41828591	41828591	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	41828591	41828591	G	A	SNP	CCDC97	ENST00000269967	human	ensembl	74_37	+1	known	missense	c.1003	p.A335T	0.186	NULL	pfam_DUF2052_coiled-coil	-	no_errors	CCDC97	HGNC	ENSG00000142039				94	0	0	57	20	25.974
ATP1A3	0	genome.wustl.edu	37	19	42492119	42492119	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	42492119	42492119	G	A	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	missense	c.326	p.A109V	1.000	tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409				149	0	0	72	48	40
ZNF221	0	genome.wustl.edu	37	19	44466912	44466912	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	44466912	44466912	G	A	SNP	ZNF221	ENST00000251269	human	ensembl	74_37	+1	known	missense	c.34	p.G12R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF221	HGNC	ENSG00000159905				59	0	0	33	14	29.7872
PLIN4	0	genome.wustl.edu	37	19	4512048	4512048	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	4512048	4512048	C	T	SNP	PLIN4	ENST00000301286	human	ensembl	74_37	-1	novel	missense	c.1882	p.V628M	0.000	NULL	pfam_Perilipin,superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PLIN4	HGNC	ENSG00000167676				210	0	0	106	64	37.6471
APOE	0	genome.wustl.edu	37	19	45412438	45412438	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	45412438	45412438	C	T	SNP	APOE	ENST00000252486	human	ensembl	74_37	+1	known	silent	c.885	p.A295	0.004	pfam_ApoA1_A4_E	pfam_ApoA1_A4_E	-	no_errors	APOE	HGNC	ENSG00000130203				35	0	0	23	10	30.303
EHD2	0	genome.wustl.edu	37	19	48229320	48229320	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	48229320	48229320	G	A	SNP	EHD2	ENST00000263277	human	ensembl	74_37	+1	known	missense	c.754	p.V252I	1.000	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD2	HGNC	ENSG00000024422				8	0	0	6	4	40
BCAT2	0	genome.wustl.edu	37	19	49299906	49299906	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	49299906	49299906	C	T	SNP	BCAT2	ENST00000316273	human	ensembl	74_37	-1	known	missense	c.994	p.V332M	0.996	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	-	no_errors	BCAT2	HGNC	ENSG00000105552				104	0	0	82	33	28.6957
GYS1	0	genome.wustl.edu	37	19	49494662	49494662	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	49494662	49494662	C	A	SNP	GYS1	ENST00000323798	human	ensembl	74_37	-1	known	missense	c.197	p.G66V	1.000	pfam_Glycogen_synth	pfam_Glycogen_synth,pfam_Glyco_trans_1,pfam_Starch_synth_cat_dom	-	no_errors	GYS1	HGNC	ENSG00000104812				274	0	0	158	88	35.7724
PRR12	0	genome.wustl.edu	37	19	50099705	50099705	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	50099705	50099705	C	T	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	missense	c.2113	p.R705C	0.986	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464				32	0	0	13	5	27.7778
PTOV1	0	genome.wustl.edu	37	19	50357780	50357780	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	50357780	50357780	G	A	SNP	PTOV1	ENST00000391842	human	ensembl	74_37	+1	known	missense	c.289	p.G97S	0.984	pfam_Mediator_Med25	pfam_Mediator_Med25	-	no_errors	PTOV1	HGNC	ENSG00000104960				99	0	0	64	40	38.4615
FPR1	0	genome.wustl.edu	37	19	52249510	52249510	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	52249510	52249510	G	A	SNP	FPR1	ENST00000304748	human	ensembl	74_37	-1	known	silent	c.738	p.V246	0.029	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt	-	no_errors	FPR1	HGNC	ENSG00000171051				67	0	0	36	21	36.8421
PTPRS	0	genome.wustl.edu	37	19	5245977	5245977	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	5245977	5245977	G	A	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	silent	c.801	p.C267	0.857	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426				16	0	0	10	8	44.4444
PRKCG	0	genome.wustl.edu	37	19	54395893	54395893	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	54395893	54395893	G	T	SNP	PRKCG	ENST00000540413	human	ensembl	74_37	+1	known	missense	c.817	p.G273C	1.000	superfamily_C2_dom,smart_C2_dom,pirsf_Protein_kinase_C_a/b/g	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,prints_DAG/PE-bd,prints_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	PRKCG	HGNC	ENSG00000126583				42	0	0	25	11	30.5556
CACNG7	0	genome.wustl.edu	37	19	54417817	54417817	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	54417817	54417817	C	T	SNP	CACNG7	ENST00000222212	human	ensembl	74_37	+1	known	missense	c.260	p.T87M	1.000	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_g7su	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_g7su,prints_VDCC_gsu	-	no_errors	CACNG7	HGNC	ENSG00000105605				48	0	0	39	11	22
LILRA2	0	genome.wustl.edu	37	19	55087402	55087402	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	55087402	55087402	G	T	SNP	LILRA2	ENST00000251377	human	ensembl	74_37	+1	known	missense	c.1081	p.G361C	0.001	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA2	HGNC	ENSG00000239998				71	0	0	52	25	32.4675
LILRB1	0	genome.wustl.edu	37	19	55144041	55144041	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	55144041	55144041	G	A	SNP	LILRB1	ENST00000324602	human	ensembl	74_37	+1	known	missense	c.788	p.R263H	0.001	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB1	HGNC	ENSG00000104972				141	0	0	110	6	5.17241
LILRB1	0	genome.wustl.edu	37	19	55145093	55145093	+	Silent	SNP	G	G	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	55145093	55145093	G	C	SNP	LILRB1	ENST00000324602	human	ensembl	74_37	+1	known	silent	c.1266	p.P422	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB1	HGNC	ENSG00000104972				30	0	0	23	3	11.5385
EPS8L1	0	genome.wustl.edu	37	19	55591186	55591186	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	55591186	55591186	C	T	SNP	EPS8L1	ENST00000201647	human	ensembl	74_37	+1	known	silent	c.246	p.P82	0.000	pfam_PTB,smart_PTB/PI_dom	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTB/PI_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L1	HGNC	ENSG00000131037				28	0	0	16	13	44.8276
NLRP13	0	genome.wustl.edu	37	19	56413493	56413493	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	56413493	56413493	G	A	SNP	NLRP13	ENST00000342929	human	ensembl	74_37	-1	known	silent	c.2697	p.H899	0.230	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP13	HGNC	ENSG00000173572				51	0	0	38	23	37.7049
LONP1	0	genome.wustl.edu	37	19	5705847	5705847	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	5705847	5705847	T	C	SNP	LONP1	ENST00000360614	human	ensembl	74_37	-1	known	missense	c.1303	p.M435V	1.000	tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Prk_AAA_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP1	HGNC	ENSG00000196365				102	0	0	57	30	34.4828
ZIM2	0	genome.wustl.edu	37	19	57286450	57286450	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	57286450	57286450	G	A	SNP	ZIM2	ENST00000221722	human	ensembl	74_37	-1	known	missense	c.1190	p.A397V	0.000	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZIM2	HGNC	ENSG00000269699				60	0	0	40	20	33.3333
ZIM2	0	genome.wustl.edu	37	19	57334113	57334113	+	Silent	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	57334113	57334113	A	C	SNP	ZIM2	ENST00000593931	human	ensembl	74_37	-1	putative	silent	c.198	p.S66	0.056	NULL	NULL	-	no_errors	ZIM2	HGNC	ENSG00000269699				29	0	0	14	7	33.3333
ZNF548	0	genome.wustl.edu	37	19	57910087	57910087	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	57910087	57910087	C	A	SNP	ZNF548	ENST00000336128	human	ensembl	74_37	+1	known	missense	c.468	p.H156Q	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF548	HGNC	ENSG00000188785				82	0	0	38	22	36.6667
ZSCAN4	0	genome.wustl.edu	37	19	58189949	58189949	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	58189949	58189949	C	T	SNP	ZSCAN4	ENST00000318203	human	ensembl	74_37	+1	known	silent	c.978	p.H326	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN4	HGNC	ENSG00000180532				104	0	0	56	16	22.2222
ZNF551	0	genome.wustl.edu	37	19	58198694	58198694	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	58198694	58198694	A	G	SNP	ZNF551	ENST00000282296	human	ensembl	74_37	+1	known	missense	c.1051	p.I351V	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF551	HGNC	ENSG00000204519				92	0	0	43	30	41.0959
ZNF552	0	genome.wustl.edu	37	19	58319557	58319557	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	58319557	58319557	T	G	SNP	ZNF552	ENST00000391701	human	ensembl	74_37	-1	known	missense	c.1075	p.K359Q	0.940	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF552	HGNC	ENSG00000178935				93	0	0	45	27	37.5
LOC100131691	0	genome.wustl.edu	37	19	59082271	59082271	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	59082271	59082271	C	T	SNP	LOC100131691	ENST00000600726	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC016629.8	Clone_based_vega_gene	ENSG00000267858				18	0	0	18	10	35.7143
RFX2	0	genome.wustl.edu	37	19	6042053	6042053	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	6042053	6042053	A	G	SNP	RFX2	ENST00000303657	human	ensembl	74_37	-1	known	splice_site	c.260+2	e3+2	1.000	-	-	-	no_errors	RFX2	HGNC	ENSG00000087903				161	0	0	98	28	22.2222
TRIP10	0	genome.wustl.edu	37	19	6746467	6746467	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	6746467	6746467	T	C	SNP	TRIP10	ENST00000313244	human	ensembl	74_37	+1	known	missense	c.1157	p.V386A	1.000	NULL	pfam_FCH_dom,pfam_SH3_domain,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	TRIP10	HGNC	ENSG00000125733				42	0	0	22	9	29.0323
TIMM44	0	genome.wustl.edu	37	19	7999057	7999057	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	7999057	7999057	T	C	SNP	TIMM44	ENST00000270538	human	ensembl	74_37	-1	known	missense	c.460	p.K154E	1.000	pirsf_Tim44,tigrfam_Tim44	pfam_Tim44-like_dom,smart_Tim44-like_dom,pirsf_Tim44,tigrfam_Tim44	-	no_errors	TIMM44	HGNC	ENSG00000104980				150	0	0	82	32	28.0702
MYO1F	0	genome.wustl.edu	37	19	8620591	8620591	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	8620591	8620591	G	A	SNP	MYO1F	ENST00000338257	human	ensembl	74_37	-1	known	silent	c.93	p.D31	0.994	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1F	HGNC	ENSG00000142347				108	0	0	51	24	32
MED16	0	genome.wustl.edu	37	19	873537	873537	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	873537	873537	A	C	SNP	MED16	ENST00000325464	human	ensembl	74_37	-1	known	missense	c.1817	p.L606R	0.995	pfam_Mediator_Med16	pfam_Mediator_Med16,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MED16	HGNC	ENSG00000175221				95	0	0	51	22	30.137
MUC16	0	genome.wustl.edu	37	19	9056201	9056201	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	9056201	9056201	T	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.31245	p.Q10415H	0.006	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				195	0	0	92	65	41.4013
MUC16	0	genome.wustl.edu	37	19	9087799	9087799	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	9087799	9087799	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.4016	p.S1339Y	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				86	0	0	44	10	18.5185
TBC1D8	0	genome.wustl.edu	37	2	101656773	101656773	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	101656773	101656773	G	A	SNP	TBC1D8	ENST00000409318	human	ensembl	74_37	-1	known	missense	c.947	p.A316V	0.234	pfam_GRAM,smart_GRAM	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8	HGNC	ENSG00000204634				46	0	0	23	14	37.8378
IL1RL1	0	genome.wustl.edu	37	2	102955439	102955439	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	102955439	102955439	A	G	SNP	IL1RL1	ENST00000404917	human	ensembl	74_37	+1	known	splice_site	c.1-2	e1-2	0.053	-	-	-	no_errors	IL1RL1	HGNC	ENSG00000115602				226	0	0	93	36	27.907
RANBP2	0	genome.wustl.edu	37	2	109379767	109379767	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	109379767	109379767	G	A	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	silent	c.2772	p.P924	0.949	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				81	0	0	47	28	37.3333
EN1	0	genome.wustl.edu	37	2	119604484	119604484	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	119604484	119604484	G	A	SNP	EN1	ENST00000295206	human	ensembl	74_37	-1	known	missense	c.260	p.A87V	0.998	NULL	pfam_Homeobox_dom,pfam_Homeobox-engrailed_C-terminal,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeodomain_engrailed,prints_Homeobox_metazoa,prints_Antifreeze_1,prints_K_chnl_volt-dep_Kv1.4	-	no_errors	EN1	HGNC	ENSG00000163064				22	0	0	11	12	52.1739
IWS1	0	genome.wustl.edu	37	2	128252455	128252455	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	128252455	128252455	G	A	SNP	IWS1	ENST00000295321	human	ensembl	74_37	-1	known	missense	c.1792	p.L598F	1.000	NULL	pfam_TFIIS_N,superfamily_TFIIS_N	-	no_errors	IWS1	HGNC	ENSG00000163166				63	0	0	28	12	30
SAP130	0	genome.wustl.edu	37	2	128775465	128775465	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	128775465	128775465	G	T	SNP	SAP130	ENST00000357702	human	ensembl	74_37	-1	known	missense	c.215	p.S72Y	0.404	NULL	NULL	-	no_errors	SAP130	HGNC	ENSG00000136715				46	0	0	32	22	40.7407
PTPN18	0	genome.wustl.edu	37	2	131130739	131130739	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	131130739	131130739	T	C	SNP	PTPN18	ENST00000175756	human	ensembl	74_37	+1	known	missense	c.1325	p.L442P	0.987	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN18	HGNC	ENSG00000072135				31	0	0	11	8	42.1053
POTEI	0	genome.wustl.edu	37	2	131221054	131221054	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	131221054	131221054	A	G	SNP	POTEI	ENST00000451531	human	ensembl	74_37	-1	novel	missense	c.2563	p.S855P	1.000	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEI	HGNC	ENSG00000196834				32	0	0	24	15	38.4615
LRP1B	0	genome.wustl.edu	37	2	141458136	141458136	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	141458136	141458136	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.6482	p.R2161Q	1.000	smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				145	0	0	81	38	31.9328
KCNJ3	0	genome.wustl.edu	37	2	155555820	155555820	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	155555820	155555820	G	A	SNP	KCNJ3	ENST00000295101	human	ensembl	74_37	+1	known	missense	c.533	p.G178D	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.1,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ3	HGNC	ENSG00000162989				93	0	0	54	18	25
NR4A2	0	genome.wustl.edu	37	2	157186121	157186121	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	157186121	157186121	C	T	SNP	NR4A2	ENST00000539077	human	ensembl	74_37	-1	known	missense	c.611	p.R204H	1.000	prints_NURR_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NURR_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A2	HGNC	ENSG00000153234				137	0	0	131	22	14.3791
UPP2	0	genome.wustl.edu	37	2	158971760	158971760	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	158971760	158971760	C	T	SNP	UPP2	ENST00000409859	human	ensembl	74_37	+1	known	missense	c.499	p.L167F	1.000	pfam_Nucleoside_phosphorylase_d,tigrfam_Uridine_phosphorylase_euk	pfam_Nucleoside_phosphorylase_d,tigrfam_Uridine_phosphorylase_euk	-	no_errors	UPP2	HGNC	ENSG00000007001				90	0	0	36	7	16.2791
BAZ2B	0	genome.wustl.edu	37	2	160182228	160182228	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	160182228	160182228	G	A	SNP	BAZ2B	ENST00000392783	human	ensembl	74_37	-1	known	nonsense	c.6145	p.Q2049*	1.000	superfamily_Bromodomain	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2B	HGNC	ENSG00000123636				79	0	0	42	25	37.3134
SCN9A	0	genome.wustl.edu	37	2	167055891	167055891	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	167055891	167055891	T	C	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	missense	c.5261	p.N1754S	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432				189	0	0	143	38	20.9945
SCN7A	0	genome.wustl.edu	37	2	167289041	167289041	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	167289041	167289041	A	G	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	silent	c.2379	p.H793	0.364	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546				172	0	0	99	52	34.4371
TTC30B	0	genome.wustl.edu	37	2	178416799	178416799	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	178416799	178416799	A	G	SNP	TTC30B	ENST00000408939	human	ensembl	74_37	-1	known	silent	c.693	p.T231	0.118	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC30B	HGNC	ENSG00000196659				82	0	0	87	14	13.8614
TTC30A	0	genome.wustl.edu	37	2	178482764	178482764	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	178482764	178482764	A	G	SNP	TTC30A	ENST00000355689	human	ensembl	74_37	-1	known	silent	c.666	p.H222	1.000	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC30A	HGNC	ENSG00000197557				62	0	0	51	7	12.069
TTC30A	0	genome.wustl.edu	37	2	178483324	178483324	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	178483324	178483324	G	C	SNP	TTC30A	ENST00000355689	human	ensembl	74_37	-1	known	missense	c.106	p.R36G	0.484	pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC30A	HGNC	ENSG00000197557				17	0	0	12	4	25
PDE11A	0	genome.wustl.edu	37	2	178937033	178937033	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	178937033	178937033	C	A	SNP	PDE11A	ENST00000286063	human	ensembl	74_37	-1	known	missense	c.132	p.Q44H	0.006	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE11A	HGNC	ENSG00000128655				41	0	0	29	12	29.2683
TTN	0	genome.wustl.edu	37	2	179399703	179399703	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	179399703	179399703	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.93935	p.E31312G	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				50	0	0	29	17	36.9565
TTN	0	genome.wustl.edu	37	2	179435692	179435692	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	179435692	179435692	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.67463	p.A22488V	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				226	0	0	125	51	28.9773
TTN	0	genome.wustl.edu	37	2	179543552	179543552	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	179543552	179543552	C	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	nonsense	c.30016	p.E10006*	1.000	pfam_PPAK_motif,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				64	0	0	36	23	38.9831
TTN	0	genome.wustl.edu	37	2	179583588	179583588	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	179583588	179583588	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.20607	p.K6869N	0.895	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				42	0	0	24	14	36.8421
ENSG00000267784	0	genome.wustl.edu	37	2	179588564	179588564	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	179588564	179588564	A	G	SNP	ENSG00000267784	ENST00000590024	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-171I2.1	Clone_based_vega_gene	ENSG00000267784				50	0	0	38	23	37.7049
NAB1	0	genome.wustl.edu	37	2	191524419	191524419	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	191524419	191524419	C	T	SNP	NAB1	ENST00000337386	human	ensembl	74_37	+1	known	missense	c.517	p.L173F	1.000	pfam_NAB_co-repressor_dom	pfam_Nab1_C,pfam_NAB_co-repressor_dom,pfam_Nab_N,superfamily_SAM/pointed	-	no_errors	NAB1	HGNC	ENSG00000138386				37	0	0	27	12	30.7692
STAT1	0	genome.wustl.edu	37	2	191873701	191873701	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	191873701	191873701	C	A	SNP	STAT1	ENST00000361099	human	ensembl	74_37	-1	known	missense	c.261	p.K87N	1.000	pfam_STAT_TF_prot_interaction,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_STAT1_TAZ2-bd_C,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT1	HGNC	ENSG00000115415				43	0	0	28	9	24.3243
HECW2	0	genome.wustl.edu	37	2	197185165	197185165	+	Splice_Site	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	197185165	197185165	T	G	SNP	HECW2	ENST00000260983	human	ensembl	74_37	-1	known	splice_site	c.885-2	e7-2	1.000	-	-	-	no_errors	HECW2	HGNC	ENSG00000138411				19	0	0	12	6	33.3333
CDK15	0	genome.wustl.edu	37	2	202671427	202671427	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	202671427	202671427	T	C	SNP	CDK15	ENST00000374598	human	ensembl	74_37	+1	known	missense	c.40	p.C14R	0.970	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK15	HGNC	ENSG00000138395				34	0	0	18	6	25
PARD3B	0	genome.wustl.edu	37	2	206305215	206305215	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	206305215	206305215	A	G	SNP	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	missense	c.2863	p.R955G	1.000	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117				145	0	0	76	48	38.7097
C2orf80	0	genome.wustl.edu	37	2	209035783	209035783	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	209035783	209035783	G	A	SNP	C2orf80	ENST00000341287	human	ensembl	74_37	-1	known	silent	c.459	p.V153	1.000	NULL	NULL	-	no_errors	C2orf80	HGNC	ENSG00000188674				101	0	0	59	26	30.5882
SPAG16	0	genome.wustl.edu	37	2	214149345	214149345	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	214149345	214149345	T	C	SNP	SPAG16	ENST00000331683	human	ensembl	74_37	+1	known	splice_site	c.136+2	e1+2	1.000	-	-	-	no_errors	SPAG16	HGNC	ENSG00000144451				31	0	0	17	6	26.087
FN1	0	genome.wustl.edu	37	2	216262403	216262403	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	216262403	216262403	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.3517	p.P1173S	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				88	0	0	44	29	39.726
MREG	0	genome.wustl.edu	37	2	216810377	216810377	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	216810377	216810377	G	A	SNP	MREG	ENST00000263268	human	ensembl	74_37	-1	known	nonsense	c.427	p.R143*	1.000	NULL	NULL	-	no_errors	MREG	HGNC	ENSG00000118242				50	0	0	25	14	35.8974
TNS1	0	genome.wustl.edu	37	2	218674599	218674599	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	218674599	218674599	G	A	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	silent	c.4908	p.I1636	0.119	pfam_PTB,smart_PTB/PI_dom	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				67	0	0	26	17	39.5349
CRYBA2	0	genome.wustl.edu	37	2	219854948	219854948	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	219854948	219854948	A	G	SNP	CRYBA2	ENST00000487181	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CRYBA2	HGNC	ENSG00000163499				80	0	0	37	29	43.9394
ZFAND2B	0	genome.wustl.edu	37	2	220073044	220073044	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	220073044	220073044	C	A	SNP	ZFAND2B	ENST00000289528	human	ensembl	74_37	+1	known	silent	c.501	p.T167	0.000	NULL	pfam_Znf_AN1,smart_Znf_AN1,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Znf_AN1	-	no_errors	ZFAND2B	HGNC	ENSG00000158552				58	0	0	27	11	28.9474
ARMC9	0	genome.wustl.edu	37	2	232123796	232123796	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	232123796	232123796	T	C	SNP	ARMC9	ENST00000349938	human	ensembl	74_37	+1	known	missense	c.1007	p.L336S	0.984	NULL	superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	ARMC9	HGNC	ENSG00000135931				54	0	0	29	17	36.9565
C2orf57	0	genome.wustl.edu	37	2	232458511	232458511	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	232458511	232458511	C	T	SNP	C2orf57	ENST00000313965	human	ensembl	74_37	+1	known	silent	c.849	p.G283	0.743	NULL	NULL	-	no_errors	C2orf57	HGNC	ENSG00000177673				101	0	0	71	29	29
ALPP	0	genome.wustl.edu	37	2	233246000	233246000	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	233246000	233246000	C	T	SNP	ALPP	ENST00000392027	human	ensembl	74_37	+1	known	missense	c.1232	p.T411M	0.997	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPP	HGNC	ENSG00000163283				59	0	0	30	11	26.8293
NEU2	0	genome.wustl.edu	37	2	233897493	233897493	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	233897493	233897493	G	A	SNP	NEU2	ENST00000233840	human	ensembl	74_37	+1	known	missense	c.112	p.A38T	0.929	superfamily_Sialidases	superfamily_Sialidases	-	no_errors	NEU2	HGNC	ENSG00000115488				75	0	0	39	32	45.0704
UGT1A4	0	genome.wustl.edu	37	2	234627599	234627599	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	234627599	234627599	C	T	SNP	UGT1A4	ENST00000373409	human	ensembl	74_37	+1	known	missense	c.133	p.R45W	0.001	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A4	HGNC	ENSG00000244474				75	0	0	44	16	26.6667
DNAJB3	0	genome.wustl.edu	37	2	234652144	234652144	+	RNA	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	234652144	234652144	G	T	SNP	DNAJB3	ENST00000449667	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.548	-	-	-	no_errors	DNAJB3	HGNC	ENSG00000227802				54	0	0	29	17	36.9565
TRPM8	0	genome.wustl.edu	37	2	234873391	234873391	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	234873391	234873391	C	A	SNP	TRPM8	ENST00000324695	human	ensembl	74_37	+1	known	silent	c.1869	p.T623	0.572	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM8	HGNC	ENSG00000144481				80	0	0	46	11	19.2982
ILKAP	0	genome.wustl.edu	37	2	239092729	239092729	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	239092729	239092729	G	A	SNP	ILKAP	ENST00000254654	human	ensembl	74_37	-1	known	silent	c.558	p.T186	0.205	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	ILKAP	HGNC	ENSG00000132323				102	0	0	46	17	26.9841
HDAC4	0	genome.wustl.edu	37	2	240056254	240056254	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	240056254	240056254	G	A	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.1064	p.T355M	1.000	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024				72	0	0	28	24	46.1538
AQP12B	0	genome.wustl.edu	37	2	241621893	241621893	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	241621893	241621893	C	T	SNP	AQP12B	ENST00000407834	human	ensembl	74_37	-1	known	missense	c.362	p.G121D	0.991	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12,prints_MIP	-	no_errors	AQP12B	HGNC	ENSG00000185176				89	0	0	42	16	27.5862
BOK	0	genome.wustl.edu	37	2	242509686	242509686	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	242509686	242509686	C	T	SNP	BOK	ENST00000318407	human	ensembl	74_37	+1	known	missense	c.496	p.R166W	1.000	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BOK	HGNC	ENSG00000176720				8	0	0	1	3	75
LOC101930257	0	genome.wustl.edu	37	2	243056854	243056854	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	243056854	243056854	A	G	SNP	LOC101930257	ENST00000431796	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC093642.5	Clone_based_vega_gene	ENSG00000220804				37	0	0	34	6	15
ASXL2	0	genome.wustl.edu	37	2	25991624	25991624	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	25991624	25991624	T	C	SNP	ASXL2	ENST00000435504	human	ensembl	74_37	-1	known	silent	c.618	p.V206	0.499	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL2	HGNC	ENSG00000143970				157	0	0	83	45	35.1562
GTF3C2	0	genome.wustl.edu	37	2	27560874	27560874	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	27560874	27560874	T	C	SNP	GTF3C2	ENST00000264720	human	ensembl	74_37	-1	known	missense	c.869	p.H290R	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GTF3C2	HGNC	ENSG00000115207				241	0	0	138	83	37.5566
EIF2B4	0	genome.wustl.edu	37	2	27591960	27591960	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	27591960	27591960	C	T	SNP	EIF2B4	ENST00000347454	human	ensembl	74_37	-1	known	missense	c.331	p.E111K	1.000	NULL	pfam_IF-2B-related	-	no_errors	EIF2B4	HGNC	ENSG00000115211				156	0	0	93	42	31.1111
HNRNPLL	0	genome.wustl.edu	37	2	38818748	38818748	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	38818748	38818748	C	T	SNP	HNRNPLL	ENST00000449105	human	ensembl	74_37	-1	known	missense	c.232	p.V78I	1.000	smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPLL	HGNC	ENSG00000143889				108	0	0	68	28	29.1667
SLC3A1	0	genome.wustl.edu	37	2	44547361	44547361	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	44547361	44547361	G	A	SNP	SLC3A1	ENST00000260649	human	ensembl	74_37	+1	known	silent	c.1641	p.S547	0.002	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	-	no_errors	SLC3A1	HGNC	ENSG00000138079				61	0	0	39	16	29.0909
NRXN1	0	genome.wustl.edu	37	2	51254651	51254651	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	51254651	51254651	T	C	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.761	p.D254G	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				29	0	0	19	7	26.9231
CHAC2	0	genome.wustl.edu	37	2	53999079	53999079	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	53999079	53999079	G	T	SNP	CHAC2	ENST00000295304	human	ensembl	74_37	+1	known	silent	c.171	p.A57	1.000	pfam_ChaC	pfam_ChaC	-	no_errors	CHAC2	HGNC	ENSG00000143942				94	0	0	66	16	19.5122
ERLEC1	0	genome.wustl.edu	37	2	54023109	54023109	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	54023109	54023109	C	A	SNP	ERLEC1	ENST00000185150	human	ensembl	74_37	+1	known	missense	c.307	p.L103I	0.998	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	ERLEC1	HGNC	ENSG00000068912				68	0	0	24	22	47.8261
CCDC88A	0	genome.wustl.edu	37	2	55561433	55561433	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	55561433	55561433	G	A	SNP	CCDC88A	ENST00000436346	human	ensembl	74_37	-1	known	nonsense	c.2524	p.R842*	1.000	superfamily_Prefoldin	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC88A	HGNC	ENSG00000115355				71	0	0	44	22	33.3333
SMEK2	0	genome.wustl.edu	37	2	55791531	55791531	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	55791531	55791531	T	G	SNP	SMEK2	ENST00000272313	human	ensembl	74_37	-1	known	missense	c.1923	p.K641N	1.000	NULL	pfam_DUF625,superfamily_ARM-type_fold	-	no_errors	SMEK2	HGNC	ENSG00000138041				85	0	0	29	17	36.9565
CMPK2	0	genome.wustl.edu	37	2	6989849	6989849	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	6989849	6989849	G	A	SNP	CMPK2	ENST00000478738	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CMPK2	HGNC	ENSG00000134326				32	0	0	18	12	40
CYP26B1	0	genome.wustl.edu	37	2	72360353	72360353	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	72360353	72360353	G	A	SNP	CYP26B1	ENST00000001146	human	ensembl	74_37	-1	known	silent	c.945	p.H315	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP26B1	HGNC	ENSG00000003137				30	0	0	20	10	33.3333
TET3	0	genome.wustl.edu	37	2	74317097	74317097	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	74317097	74317097	A	G	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	missense	c.2557	p.M853V	1.000	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605				185	0	0	129	77	37.3786
MOGS	0	genome.wustl.edu	37	2	74689670	74689670	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	74689670	74689670	C	A	SNP	MOGS	ENST00000233616	human	ensembl	74_37	-1	known	missense	c.1246	p.G416W	0.021	pfam_Glycoside_hydrolase_63	pfam_Glycoside_hydrolase_63,superfamily_6-hairpin_glycosidase-like	-	no_errors	MOGS	HGNC	ENSG00000115275				199	0	0	112	58	34.1176
LBX2	0	genome.wustl.edu	37	2	74725093	74725093	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	74725093	74725093	C	T	SNP	LBX2	ENST00000377566	human	ensembl	74_37	-1	known	silent	c.558	p.R186	0.003	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	LBX2	HGNC	ENSG00000179528				49	0	0	26	14	35
KIDINS220	0	genome.wustl.edu	37	2	8919071	8919071	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	8919071	8919071	C	T	SNP	KIDINS220	ENST00000256707	human	ensembl	74_37	-1	known	missense	c.2569	p.V857I	1.000	pfam_KAP_NTPase	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313				130	0	0	62	32	34.0426
NEURL3	0	genome.wustl.edu	37	2	97166219	97166219	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	97166219	97166219	G	A	SNP	NEURL3	ENST00000310865	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.906	-	-	-	no_errors	NEURL3	HGNC	ENSG00000163121				22	0	0	12	8	40
CNNM3	0	genome.wustl.edu	37	2	97494763	97494763	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	97494763	97494763	C	A	SNP	CNNM3	ENST00000305510	human	ensembl	74_37	+1	known	missense	c.1951	p.L651M	1.000	NULL	pfam_DUF21,superfamily_RNA_pol_subH/Rpb5_C,superfamily_cNMP-bd-like	-	no_errors	CNNM3	HGNC	ENSG00000168763				90	0	0	44	13	22.807
JAG1	0	genome.wustl.edu	37	20	10629248	10629248	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	10629248	10629248	G	A	SNP	JAG1	ENST00000254958	human	ensembl	74_37	-1	known	silent	c.1518	p.I506	1.000	pfam_EG-like_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	JAG1	HGNC	ENSG00000101384				61	0	0	28	23	45.098
SDCBP2	0	genome.wustl.edu	37	20	1291095	1291095	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	1291095	1291095	G	A	SNP	SDCBP2	ENST00000339987	human	ensembl	74_37	-1	known	missense	c.869	p.P290L	1.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SDCBP2	HGNC	ENSG00000125775				89	0	0	34	14	29.1667
KIF16B	0	genome.wustl.edu	37	20	16359706	16359706	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	16359706	16359706	G	A	SNP	KIF16B	ENST00000408042	human	ensembl	74_37	-1	known	missense	c.2941	p.R981C	0.983	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF16B	HGNC	ENSG00000089177				206	0	0	124	47	27.4854
CST7	0	genome.wustl.edu	37	20	24938043	24938043	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	24938043	24938043	C	T	SNP	CST7	ENST00000376835	human	ensembl	74_37	+1	known	missense	c.257	p.T86M	0.977	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST7	HGNC	ENSG00000077984				145	0	0	70	26	27.0833
DEFB119	0	genome.wustl.edu	37	20	29976953	29976953	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	29976953	29976953	G	A	SNP	DEFB119	ENST00000376315	human	ensembl	74_37	-1	known	missense	c.142	p.R48W	0.428	superfamily_Scorpion_toxin-like	superfamily_Scorpion_toxin-like	-	no_errors	DEFB119	HGNC	ENSG00000180483				131	0	0	54	43	44.3299
NECAB3	0	genome.wustl.edu	37	20	32248163	32248163	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	32248163	32248163	C	T	SNP	NECAB3	ENST00000246190	human	ensembl	74_37	-1	known	silent	c.426	p.T142	0.074	NULL	pfam_Antibiotic_mOase,pfam_EF_hand_dom,superfamily_Dimeric_a/b-barrel,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NECAB3	HGNC	ENSG00000125967				70	0	0	52	16	23.5294
TRPC4AP	0	genome.wustl.edu	37	20	33591353	33591353	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	33591353	33591353	G	A	SNP	TRPC4AP	ENST00000252015	human	ensembl	74_37	-1	known	missense	c.2116	p.P706S	1.000	pfam_DUF3689	pfam_DUF3689	-	no_errors	TRPC4AP	HGNC	ENSG00000100991				46	0	0	38	25	39.6825
CNBD2	0	genome.wustl.edu	37	20	34611560	34611560	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	34611560	34611560	G	A	SNP	CNBD2	ENST00000373973	human	ensembl	74_37	+1	known	missense	c.1306	p.D436N	0.724	superfamily_cNMP-bd-like	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNBD2	HGNC	ENSG00000149646				118	0	0	53	28	34.5679
ATRN	0	genome.wustl.edu	37	20	3540127	3540127	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	3540127	3540127	C	T	SNP	ATRN	ENST00000262919	human	ensembl	74_37	+1	known	silent	c.1200	p.Y400	0.995	NULL	pfam_Kelch_1,pfam_Plexin_repeat,pfam_CUB_dom,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRN	HGNC	ENSG00000088812				92	0	0	37	19	33.9286
RALGAPB	0	genome.wustl.edu	37	20	37168534	37168534	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	37168534	37168534	T	C	SNP	RALGAPB	ENST00000262879	human	ensembl	74_37	+1	known	missense	c.2495	p.M832T	1.000	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPB	HGNC	ENSG00000170471				79	0	0	52	15	22.3881
PPP1R16B	0	genome.wustl.edu	37	20	37464806	37464806	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	37464806	37464806	G	A	SNP	PPP1R16B	ENST00000299824	human	ensembl	74_37	+1	known	missense	c.238	p.D80N	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R16B	HGNC	ENSG00000101445				61	0	0	30	8	21.0526
DHX35	0	genome.wustl.edu	37	20	37617501	37617501	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	37617501	37617501	G	A	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	missense	c.391	p.E131K	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX35	HGNC	ENSG00000101452				123	0	0	69	39	36.1111
PLCG1	0	genome.wustl.edu	37	20	39791907	39791907	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	39791907	39791907	T	C	SNP	PLCG1	ENST00000244007	human	ensembl	74_37	+1	known	missense	c.781	p.Y261H	1.000	pfam_PLipase_C_EF-hand-like,pirsf_PLC-gamma	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_Pleckstrin_homology,pfam_C2_dom,pfam_SH3_domain,pfam_SH3_2,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2	-	no_errors	PLCG1	HGNC	ENSG00000124181				156	0	0	91	15	14.1509
PTPRT	0	genome.wustl.edu	37	20	40714411	40714411	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	40714411	40714411	T	G	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.3986	p.E1329A	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				94	0	0	88	15	14.5631
KCNS1	0	genome.wustl.edu	37	20	43726361	43726361	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	43726361	43726361	C	T	SNP	KCNS1	ENST00000306117	human	ensembl	74_37	-1	known	missense	c.1052	p.R351H	1.000	pfam_Ion_trans_dom,prints_K_chnl,prints_K_chnl_volt-dep_Kv	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNS1	HGNC	ENSG00000124134				28	0	0	20	8	28.5714
WFDC6	0	genome.wustl.edu	37	20	44167994	44167994	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	44167994	44167994	T	C	SNP	WFDC6	ENST00000600168	human	ensembl	74_37	-1	known	missense	c.53	p.D18G	0.000	NULL	pfam_Prot_inh_Kunz-m,pfam_WAP-type_4-diS_core,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	WFDC6	HGNC	ENSG00000243543				92	0	0	51	20	28.169
ZNF335	0	genome.wustl.edu	37	20	44586250	44586250	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	44586250	44586250	C	T	SNP	ZNF335	ENST00000322927	human	ensembl	74_37	-1	known	missense	c.2417	p.R806Q	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF335	HGNC	ENSG00000198026				41	0	0	29	9	23.6842
PREX1	0	genome.wustl.edu	37	20	47317421	47317421	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	47317421	47317421	A	G	SNP	PREX1	ENST00000371941	human	ensembl	74_37	-1	known	missense	c.787	p.S263P	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX1	HGNC	ENSG00000124126				164	0	0	109	45	29.2208
ATP9A	0	genome.wustl.edu	37	20	50273655	50273655	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	50273655	50273655	G	A	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	missense	c.1328	p.T443M	0.179	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793				49	0	0	37	10	21.2766
SALL4	0	genome.wustl.edu	37	20	50406893	50406893	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	50406893	50406893	G	A	SNP	SALL4	ENST00000217086	human	ensembl	74_37	-1	known	missense	c.2129	p.T710M	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL4	HGNC	ENSG00000101115				67	0	0	30	25	45.4545
CDS2	0	genome.wustl.edu	37	20	5167481	5167481	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	5167481	5167481	G	A	SNP	CDS2	ENST00000460006	human	ensembl	74_37	+1	known	missense	c.977	p.G326D	1.000	pfam_PC_trans,pirsf_PC_Trfase_euk	pfam_PC_trans,pirsf_PC_Trfase_euk	-	no_errors	CDS2	HGNC	ENSG00000101290				81	0	0	55	25	31.25
BCAS1	0	genome.wustl.edu	37	20	52645067	52645067	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	52645067	52645067	T	C	SNP	BCAS1	ENST00000371440	human	ensembl	74_37	-1	known	missense	c.587	p.K196R	0.513	NULL	NULL	-	no_errors	BCAS1	HGNC	ENSG00000064787				176	0	0	118	56	32.1839
CSTF1	0	genome.wustl.edu	37	20	54970790	54970790	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	54970790	54970790	C	T	SNP	CSTF1	ENST00000490539	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CSTF1	HGNC	ENSG00000101138				43	0	0	27	13	32.5
CDH4	0	genome.wustl.edu	37	20	60498761	60498761	+	Silent	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	60498761	60498761	A	C	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	silent	c.1627	p.R543	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin/Desmocollin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242				70	0	0	21	12	36.3636
LSM14B	0	genome.wustl.edu	37	20	60704949	60704949	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	60704949	60704949	G	A	SNP	LSM14B	ENST00000279068	human	ensembl	74_37	+1	known	missense	c.536	p.G179D	0.000	NULL	pfam_FDF_dom,superfamily_LSM_dom	-	no_errors	LSM14B	HGNC	ENSG00000149657				32	0	0	14	7	33.3333
DIDO1	0	genome.wustl.edu	37	20	61511147	61511147	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	61511147	61511147	G	A	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.6161	p.A2054V	0.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				165	0	0	98	51	34.2282
YTHDF1	0	genome.wustl.edu	37	20	61833843	61833843	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	61833843	61833843	A	G	SNP	YTHDF1	ENST00000370339	human	ensembl	74_37	-1	known	silent	c.1449	p.D483	1.000	pfam_YTH_domain,pfscan_YTH_domain	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDF1	HGNC	ENSG00000149658				77	0	0	46	32	41.0256
OPRL1	0	genome.wustl.edu	37	20	62729906	62729906	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	62729906	62729906	G	A	SNP	OPRL1	ENST00000336866	human	ensembl	74_37	+1	known	silent	c.867	p.G289	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_X_opioid_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_X_opioid_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Somatstn_rcpt,prints_Neuropept_B/W_rcpt,prints_NPY_rcpt	-	no_errors	OPRL1	HGNC	ENSG00000125510				58	0	0	44	23	34.3284
NRIP1	0	genome.wustl.edu	37	21	16339973	16339973	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	16339973	16339973	C	T	SNP	NRIP1	ENST00000318948	human	ensembl	74_37	-1	known	missense	c.541	p.A181T	1.000	NULL	NULL	-	no_errors	NRIP1	HGNC	ENSG00000180530				70	0	0	16	15	48.3871
USP25	0	genome.wustl.edu	37	21	17205809	17205809	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	17205809	17205809	G	A	SNP	USP25	ENST00000400183	human	ensembl	74_37	+1	known	silent	c.2136	p.L712	1.000	NULL	pfam_Peptidase_C19/C67,pfam_Ubiquitin-int_motif,superfamily_UBA-like,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Peptidase_C19/C67	-	no_errors	USP25	HGNC	ENSG00000155313				43	0	0	7	17	70.8333
HUNK	0	genome.wustl.edu	37	21	33370854	33370854	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	33370854	33370854	G	A	SNP	HUNK	ENST00000270112	human	ensembl	74_37	+1	known	missense	c.1502	p.R501H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HUNK	HGNC	ENSG00000142149				131	0	0	31	39	55.7143
CRYZL1	0	genome.wustl.edu	37	21	34997046	34997046	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	34997046	34997046	C	T	SNP	CRYZL1	ENST00000381554	human	ensembl	74_37	-1	known	silent	c.87	p.E29	0.995	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	CRYZL1	HGNC	ENSG00000205758				107	0	0	15	32	68.0851
ABCG1	0	genome.wustl.edu	37	21	43691237	43691237	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	43691237	43691237	C	T	SNP	ABCG1	ENST00000398437	human	ensembl	74_37	+1	known	missense	c.782	p.A261V	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Pigment_permease	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Pigment_permease	-	no_errors	ABCG1	HGNC	ENSG00000160179				102	0	0	18	13	41.9355
RRP1	0	genome.wustl.edu	37	21	45217248	45217248	+	RNA	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	45217248	45217248	G	T	SNP	RRP1	ENST00000471909	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	RRP1	HGNC	ENSG00000160214				34	0	0	7	6	46.1538
POFUT2	0	genome.wustl.edu	37	21	46705687	46705687	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	46705687	46705687	G	A	SNP	POFUT2	ENST00000349485	human	ensembl	74_37	-1	known	silent	c.288	p.D96	0.998	pfam_GDP-Fuc_O-FucTrfase	pfam_GDP-Fuc_O-FucTrfase,superfamily_DUF749	-	no_errors	POFUT2	HGNC	ENSG00000186866				137	0	0	43	54	55.6701
COL6A1	0	genome.wustl.edu	37	21	47419132	47419132	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	47419132	47419132	G	T	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	missense	c.1740	p.Q580H	1.000	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156				19	0	0	5	3	37.5
PCNT	0	genome.wustl.edu	37	21	47821588	47821588	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	47821588	47821588	A	G	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	missense	c.4915	p.I1639V	0.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299				117	1	0.847458	61	5	7.57576
PRMT2	0	genome.wustl.edu	37	21	48078788	48078788	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	48078788	48078788	G	A	SNP	PRMT2	ENST00000355680	human	ensembl	74_37	+1	known	silent	c.786	p.V262	0.997	pfam_Arg_MeTrfase	pfam_SH3_domain,pfam_Arg_MeTrfase,pfam_SH3_2,pfam_Small_mtfrase_dom,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_tRNA_Trfase_Trm5/Tyw2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PRMT2	HGNC	ENSG00000160310				51	0	0	11	11	50
DGCR8	0	genome.wustl.edu	37	22	20094884	20094884	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	20094884	20094884	G	A	SNP	DGCR8	ENST00000351989	human	ensembl	74_37	+1	known	missense	c.2087	p.R696H	1.000	NULL	pfam_dsRNA-bd_dom,superfamily_WW_dom,smart_WW_dom,smart_dsRNA-bd_dom,pfscan_WW_dom,pfscan_dsRNA-bd_dom	-	no_errors	DGCR8	HGNC	ENSG00000128191				120	0	0	44	24	35.2941
ZDHHC8	0	genome.wustl.edu	37	22	20131022	20131022	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	20131022	20131022	C	A	SNP	ZDHHC8	ENST00000405930	human	ensembl	74_37	+1	known	silent	c.1869	p.A623	0.285	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC8	HGNC	ENSG00000099904				23	0	0	8	10	55.5556
MYO18B	0	genome.wustl.edu	37	22	26193919	26193919	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	26193919	26193919	G	T	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	splice_site	c.2377-1	e11-1	1.000	-	-	-	no_errors	MYO18B	HGNC	ENSG00000133454				145	0	0	67	20	22.9885
MTMR3	0	genome.wustl.edu	37	22	30403965	30403965	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	30403965	30403965	G	A	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	missense	c.953	p.R318H	1.000	pfam_Myotubularin-like_Pase_dom	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330				45	0	0	49	4	7.54717
SMTN	0	genome.wustl.edu	37	22	31496972	31496972	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	31496972	31496972	G	A	SNP	SMTN	ENST00000333137	human	ensembl	74_37	+1	known	missense	c.2705	p.R902H	1.000	pfam_CH-domain,superfamily_CH-domain,pfscan_CH-domain	pfam_Smoothelin,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963				29	0	0	16	9	36
TRIOBP	0	genome.wustl.edu	37	22	38131430	38131430	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	38131430	38131430	C	A	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.5087	p.P1696H	0.583	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106				12	0	0	8	4	33.3333
SLC16A8	0	genome.wustl.edu	37	22	38476959	38476959	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	38476959	38476959	C	T	SNP	SLC16A8	ENST00000320521	human	ensembl	74_37	-1	known	silent	c.1086	p.A362	0.796	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A8	HGNC	ENSG00000100156				13	0	0	6	4	40
TMEM184B	0	genome.wustl.edu	37	22	38621509	38621509	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	38621509	38621509	G	A	SNP	TMEM184B	ENST00000361684	human	ensembl	74_37	-1	known	missense	c.709	p.R237W	0.745	pfam_Ost-alpha	pfam_Ost-alpha	-	no_errors	TMEM184B	HGNC	ENSG00000198792				85	0	0	50	23	31.5068
LOC100506679	0	genome.wustl.edu	37	22	43435697	43435697	+	RNA	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	43435697	43435697	A	T	SNP	LOC100506679	ENST00000443063	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AL022476.2	Clone_based_vega_gene	ENSG00000230319				39	0	0	31	14	31.1111
SCUBE1	0	genome.wustl.edu	37	22	43610096	43610096	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	43610096	43610096	C	A	SNP	SCUBE1	ENST00000360835	human	ensembl	74_37	-1	known	missense	c.2053	p.G685C	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE1	HGNC	ENSG00000159307				30	0	0	16	4	20
WNT7B	0	genome.wustl.edu	37	22	46345856	46345856	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	46345856	46345856	C	T	SNP	WNT7B	ENST00000339464	human	ensembl	74_37	-1	known	missense	c.242	p.R81H	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt7	-	no_errors	WNT7B	HGNC	ENSG00000188064				62	0	0	39	15	27.7778
ALG12	0	genome.wustl.edu	37	22	50297834	50297834	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	50297834	50297834	C	T	SNP	ALG12	ENST00000330817	human	ensembl	74_37	-1	known	missense	c.1231	p.A411T	0.637	NULL	pfam_GPI_mannosylTrfase	-	no_errors	ALG12	HGNC	ENSG00000182858				57	0	0	35	25	41.6667
IMPG2	0	genome.wustl.edu	37	3	100964796	100964796	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	100964796	100964796	C	T	SNP	IMPG2	ENST00000193391	human	ensembl	74_37	-1	known	missense	c.1393	p.A465T	0.233	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG2	HGNC	ENSG00000081148				107	0	0	72	33	31.4286
CASR	0	genome.wustl.edu	37	3	121981056	121981056	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	121981056	121981056	C	T	SNP	CASR	ENST00000498619	human	ensembl	74_37	+1	known	nonsense	c.1174	p.R392*	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	CASR	HGNC	ENSG00000036828				89	0	0	54	20	27.027
EEFSEC	0	genome.wustl.edu	37	3	127983467	127983467	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	127983467	127983467	C	T	SNP	EEFSEC	ENST00000254730	human	ensembl	74_37	+1	known	missense	c.629	p.T210M	0.859	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EEFSEC	HGNC	ENSG00000132394				155	0	0	112	44	28.2051
CAND2	0	genome.wustl.edu	37	3	12867068	12867068	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	12867068	12867068	G	A	SNP	CAND2	ENST00000456430	human	ensembl	74_37	+1	known	missense	c.3140	p.R1047Q	1.000	pfam_TATA-bd_TIP120,superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND2	HGNC	ENSG00000144712				27	0	0	7	6	46.1538
KIAA1257	0	genome.wustl.edu	37	3	128696934	128696934	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	128696934	128696934	C	T	SNP	KIAA1257	ENST00000265068	human	ensembl	74_37	-1	known	silent	c.762	p.P254	0.000	NULL	NULL	-	no_errors	KIAA1257	HGNC	ENSG00000114656				73	0	0	51	23	31.0811
COL6A6	0	genome.wustl.edu	37	3	130377519	130377519	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	130377519	130377519	G	T	SNP	COL6A6	ENST00000358511	human	ensembl	74_37	+1	known	splice_site	c.5734-1	e33-1	1.000	-	-	-	no_errors	COL6A6	HGNC	ENSG00000206384				23	0	0	10	5	33.3333
TF	0	genome.wustl.edu	37	3	133475165	133475165	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	133475165	133475165	G	A	SNP	TF	ENST00000402696	human	ensembl	74_37	+1	known	silent	c.675	p.K225	0.992	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	TF	HGNC	ENSG00000091513				38	0	0	30	5	14.2857
MSL2	0	genome.wustl.edu	37	3	135871069	135871069	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	135871069	135871069	A	G	SNP	MSL2	ENST00000309993	human	ensembl	74_37	-1	known	silent	c.654	p.I218	0.957	NULL	pfscan_Znf_RING	-	no_errors	MSL2	HGNC	ENSG00000174579				66	0	0	47	18	27.6923
TRPC1	0	genome.wustl.edu	37	3	142467219	142467219	+	Silent	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	142467219	142467219	A	T	SNP	TRPC1	ENST00000476941	human	ensembl	74_37	+1	known	silent	c.549	p.V183	0.716	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,tigrfam_TRP_channel	pfam_TRP_dom,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC1_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC1	HGNC	ENSG00000144935				150	0	0	152	54	26.2136
IGSF10	0	genome.wustl.edu	37	3	151171285	151171285	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	151171285	151171285	G	T	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.602	p.P201H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				100	0	0	86	19	18.0952
PLCH1	0	genome.wustl.edu	37	3	155200527	155200527	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	155200527	155200527	A	G	SNP	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	silent	c.3312	p.G1104	0.000	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805				182	0	0	150	48	24.2424
KCNAB1	0	genome.wustl.edu	37	3	156232161	156232161	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	156232161	156232161	C	T	SNP	KCNAB1	ENST00000490337	human	ensembl	74_37	+1	known	nonsense	c.667	p.R223*	0.991	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,tigrfam_K_chnl_volt-dep_bsu_KCNAB	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB1,prints_K_chnl_volt-dep_bsu_KCNAB3,tigrfam_K_chnl_volt-dep_bsu_KCNAB	-	no_errors	KCNAB1	HGNC	ENSG00000169282				98	0	0	77	28	26.6667
IL12A	0	genome.wustl.edu	37	3	159713213	159713213	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	159713213	159713213	C	T	SNP	IL12A	ENST00000305579	human	ensembl	74_37	+1	known	missense	c.629	p.T210I	0.001	pfam_IL-12_alpha,superfamily_4_helix_cytokine-like_core	pfam_IL-12_alpha,superfamily_4_helix_cytokine-like_core	-	no_errors	IL12A	HGNC	ENSG00000168811				80	0	0	88	13	12.8713
SI	0	genome.wustl.edu	37	3	164777022	164777022	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	164777022	164777022	C	T	SNP	SI	ENST00000264382	human	ensembl	74_37	-1	known	silent	c.1212	p.A404	0.021	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402				46	0	0	44	21	32.3077
SLC7A14	0	genome.wustl.edu	37	3	170184995	170184995	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	170184995	170184995	C	T	SNP	SLC7A14	ENST00000231706	human	ensembl	74_37	-1	known	missense	c.2164	p.G722R	1.000	NULL	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293				83	0	0	81	26	24.2991
SLC7A14	0	genome.wustl.edu	37	3	170216628	170216628	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	170216628	170216628	G	A	SNP	SLC7A14	ENST00000231706	human	ensembl	74_37	-1	known	missense	c.587	p.A196V	0.997	pfam_AA-permease/SLC12A_dom	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293				77	0	0	77	19	19.7917
ECT2	0	genome.wustl.edu	37	3	172520688	172520688	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	172520688	172520688	G	A	SNP	ECT2	ENST00000427830	human	ensembl	74_37	+1	known	missense	c.1931	p.R644Q	1.000	NULL	pfam_DH-domain,pfam_BRCT_dom,superfamily_DH-domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_DH-domain,pfscan_BRCT_dom,pfscan_DH-domain	-	no_errors	ECT2	HGNC	ENSG00000114346				65	0	0	50	11	18.0328
KCNMB2	0	genome.wustl.edu	37	3	178546038	178546038	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	178546038	178546038	C	T	SNP	KCNMB2	ENST00000358316	human	ensembl	74_37	+1	known	silent	c.300	p.S100	1.000	pfam_K_chnl_Ca-activ_BK_bsu	pfam_K_chnl_Ca-activ_BK_bsu,pfam_KCNMB2_ball_chain_dom,prints_K_chnl_Ca-activ_BK_bsu	-	no_errors	KCNMB2	HGNC	ENSG00000197584				74	0	0	64	20	23.8095
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879				55	0	0	54	16	22.8571
DVL3	0	genome.wustl.edu	37	3	183884279	183884279	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	183884279	183884279	C	T	SNP	DVL3	ENST00000313143	human	ensembl	74_37	+1	known	missense	c.949	p.R317W	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_fam,prints_Dishevelled_3	-	no_errors	DVL3	HGNC	ENSG00000161202				145	0	0	92	40	30.303
ABCF3	0	genome.wustl.edu	37	3	183908990	183908990	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	183908990	183908990	G	A	SNP	ABCF3	ENST00000429586	human	ensembl	74_37	+1	known	missense	c.1516	p.V506I	0.160	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF3	HGNC	ENSG00000161204				169	0	0	170	36	17.4757
CLCN2	0	genome.wustl.edu	37	3	184075423	184075423	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	184075423	184075423	C	T	SNP	CLCN2	ENST00000265593	human	ensembl	74_37	-1	known	missense	c.757	p.A253T	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated,prints_Cl-channel-2	-	no_errors	CLCN2	HGNC	ENSG00000114859				109	0	0	66	20	23.2558
HRG	0	genome.wustl.edu	37	3	186395311	186395311	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	186395311	186395311	C	A	SNP	HRG	ENST00000232003	human	ensembl	74_37	+1	known	missense	c.1217	p.P406H	0.121	NULL	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	HRG	HGNC	ENSG00000113905				19	0	0	18	4	18.1818
LRRC15	0	genome.wustl.edu	37	3	194080887	194080887	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	194080887	194080887	G	A	SNP	LRRC15	ENST00000439944	human	ensembl	74_37	-1	known	missense	c.904	p.R302W	0.257	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC15	HGNC	ENSG00000172061				93	0	0	73	28	27.7228
TMEM44	0	genome.wustl.edu	37	3	194344395	194344395	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	194344395	194344395	G	A	SNP	TMEM44	ENST00000392432	human	ensembl	74_37	-1	known	missense	c.388	p.R130W	0.920	NULL	NULL	-	no_errors	TMEM44	HGNC	ENSG00000145014				60	0	0	47	11	18.9655
MUC4	0	genome.wustl.edu	37	3	195501057	195501057	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	195501057	195501057	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.13063	p.R4355C	0.794	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				35	0	0	22	12	35.2941
TNK2	0	genome.wustl.edu	37	3	195611844	195611844	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	195611844	195611844	G	A	SNP	TNK2	ENST00000381916	human	ensembl	74_37	-1	known	missense	c.484	p.R162W	1.000	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	TNK2	HGNC	ENSG00000061938				71	0	0	54	16	22.8571
NKIRAS1	0	genome.wustl.edu	37	3	23952392	23952392	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	23952392	23952392	C	A	SNP	NKIRAS1	ENST00000388759	human	ensembl	74_37	-1	known	nonsense	c.4	p.G2*	1.000	superfamily_P-loop_NTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Ras,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	NKIRAS1	HGNC	ENSG00000197885				62	0	0	24	15	38.4615
DYNC1LI1	0	genome.wustl.edu	37	3	32612171	32612171	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	32612171	32612171	G	A	SNP	DYNC1LI1	ENST00000273130	human	ensembl	74_37	-1	known	missense	c.92	p.A31V	0.146	NULL	pfam_Dynein_light_int_chain,superfamily_P-loop_NTPase	-	no_errors	DYNC1LI1	HGNC	ENSG00000144635				22	0	0	14	6	30
LRRFIP2	0	genome.wustl.edu	37	3	37149577	37149577	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	37149577	37149577	C	T	SNP	LRRFIP2	ENST00000336686	human	ensembl	74_37	-1	known	missense	c.701	p.R234Q	1.000	NULL	pfam_Leu-rich_rep_flightless-int_pr,superfamily_bHLH_dom,superfamily_Prefoldin	-	no_errors	LRRFIP2	HGNC	ENSG00000093167				52	0	0	26	11	29.7297
DLEC1	0	genome.wustl.edu	37	3	38163221	38163221	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	38163221	38163221	G	A	SNP	DLEC1	ENST00000346219	human	ensembl	74_37	+1	known	missense	c.4969	p.V1657I	0.939	NULL	superfamily_PapD-like	-	no_errors	DLEC1	HGNC	ENSG00000008226				96	0	0	53	17	24.2857
RPSA	0	genome.wustl.edu	37	3	39452388	39452388	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	39452388	39452388	G	T	SNP	RPSA	ENST00000301821	human	ensembl	74_37	+1	known	missense	c.396	p.Q132H	1.000	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2,tigrfam_Ribosomal_S2_euk/arc	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2,tigrfam_Ribosomal_S2_euk/arc	-	no_errors	RPSA	HGNC	ENSG00000168028				55	0	0	46	17	26.9841
KLHL40	0	genome.wustl.edu	37	3	42727728	42727728	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	42727728	42727728	C	T	SNP	KLHL40	ENST00000287777	human	ensembl	74_37	+1	known	silent	c.618	p.D206	0.995	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL40	HGNC	ENSG00000157119				14	0	0	8	5	38.4615
KIAA1143	0	genome.wustl.edu	37	3	44795024	44795024	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	44795024	44795024	C	T	SNP	KIAA1143	ENST00000296121	human	ensembl	74_37	-1	known	missense	c.274	p.D92N	1.000	NULL	NULL	-	no_errors	KIAA1143	HGNC	ENSG00000163807				65	0	0	37	21	36.2069
CDCP1	0	genome.wustl.edu	37	3	45136923	45136923	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	45136923	45136923	T	C	SNP	CDCP1	ENST00000296129	human	ensembl	74_37	-1	known	missense	c.1162	p.T388A	1.000	NULL	superfamily_CUB_dom	-	no_errors	CDCP1	HGNC	ENSG00000163814				55	0	0	30	22	42.3077
FYCO1	0	genome.wustl.edu	37	3	45965194	45965194	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	45965194	45965194	G	A	SNP	FYCO1	ENST00000535325	human	ensembl	74_37	-1	known	missense	c.4375	p.R1459C	0.986	superfamily_GOLD,pfscan_GOLD	pfam_Znf_FYVE,pfam_Run,superfamily_GOLD,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Znf_FYVE,pfscan_GOLD,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	FYCO1	HGNC	ENSG00000163820				140	0	0	64	42	39.6226
PTPN23	0	genome.wustl.edu	37	3	47453790	47453790	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	47453790	47453790	C	T	SNP	PTPN23	ENST00000265562	human	ensembl	74_37	+1	known	missense	c.4196	p.T1399M	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_BRO1_dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_BRO1_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN23	HGNC	ENSG00000076201				151	0	0	74	37	33.3333
ENSG00000271161	0	genome.wustl.edu	37	3	47541373	47541373	+	RNA	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	47541373	47541373	C	A	SNP	ENSG00000271161	ENST00000604904	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.170	-	-	-	no_errors	RP11-708J19.2	Clone_based_vega_gene	ENSG00000271161				8	0	0	4	4	50
DHX30	0	genome.wustl.edu	37	3	47882645	47882645	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	47882645	47882645	C	A	SNP	DHX30	ENST00000445061	human	ensembl	74_37	+1	known	silent	c.645	p.S215	0.997	NULL	pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX30	HGNC	ENSG00000132153				35	0	0	13	10	43.4783
CELSR3	0	genome.wustl.edu	37	3	48698423	48698423	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	48698423	48698423	G	A	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.1645	p.R549C	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300				48	0	0	34	14	29.1667
BSN	0	genome.wustl.edu	37	3	49691512	49691512	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	49691512	49691512	C	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.4523	p.T1508M	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061				120	0	0	65	42	39.2523
CAMKV	0	genome.wustl.edu	37	3	49899527	49899527	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	49899527	49899527	C	T	SNP	CAMKV	ENST00000477224	human	ensembl	74_37	-1	known	missense	c.178	p.G60S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKV	HGNC	ENSG00000164076				35	0	0	25	9	26.4706
GNAT1	0	genome.wustl.edu	37	3	50231088	50231088	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	50231088	50231088	G	A	SNP	GNAT1	ENST00000232461	human	ensembl	74_37	+1	known	silent	c.441	p.S147	0.004	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAT1	HGNC	ENSG00000114349				55	0	0	27	18	40
LOC101928965	0	genome.wustl.edu	37	3	50403335	50403335	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	50403335	50403335	C	T	SNP	LOC101928965	ENST00000607121	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XXcos-LUCA11.4	Clone_based_vega_gene	ENSG00000271858				32	0	0	22	5	18.5185
RAD54L2	0	genome.wustl.edu	37	3	51696873	51696873	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	51696873	51696873	G	A	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.3841	p.V1281M	0.998	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080				26	0	0	25	10	28.5714
IQCF2	0	genome.wustl.edu	37	3	51895714	51895714	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	51895714	51895714	C	T	SNP	IQCF2	ENST00000429548	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	IQCF2	HGNC	ENSG00000184345				78	0	0	27	14	34.1463
PARP3	0	genome.wustl.edu	37	3	51981696	51981696	+	RNA	SNP	C	C	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	51981696	51981696	C	G	SNP	PARP3	ENST00000486510	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PARP3	HGNC	ENSG00000041880				23	0	0	27	15	35.7143
STAB1	0	genome.wustl.edu	37	3	52539377	52539377	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	52539377	52539377	C	T	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.1561	p.R521C	1.000	pfam_FAS1_domain,superfamily_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327				39	0	0	18	9	33.3333
ARF4	0	genome.wustl.edu	37	3	57582804	57582804	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	57582804	57582804	T	C	SNP	ARF4	ENST00000303436	human	ensembl	74_37	-1	known	missense	c.64	p.M22V	1.000	pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARF4	HGNC	ENSG00000168374				52	0	0	21	16	43.2432
FLNB	0	genome.wustl.edu	37	3	58109159	58109159	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	58109159	58109159	G	A	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.3466	p.V1156I	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				147	0	0	83	37	30.8333
KCTD6	0	genome.wustl.edu	37	3	58484416	58484416	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	58484416	58484416	A	G	SNP	KCTD6	ENST00000479470	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.077	-	-	-	no_errors	KCTD6	HGNC	ENSG00000168301				84	0	0	56	33	37.0787
FAM3D	0	genome.wustl.edu	37	3	58620027	58620027	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	58620027	58620027	G	A	SNP	FAM3D	ENST00000358781	human	ensembl	74_37	-1	known	silent	c.654	p.C218	0.874	NULL	NULL	-	no_errors	FAM3D	HGNC	ENSG00000198643				125	0	0	57	27	32.1429
SLC25A26	0	genome.wustl.edu	37	3	66293695	66293695	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	66293695	66293695	A	T	SNP	SLC25A26	ENST00000354883	human	ensembl	74_37	+1	known	missense	c.259	p.T87S	0.731	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A26	HGNC	ENSG00000144741				150	0	0	81	30	27.027
FOXP1	0	genome.wustl.edu	37	3	71090609	71090609	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	71090609	71090609	T	C	SNP	FOXP1	ENST00000318789	human	ensembl	74_37	-1	known	missense	c.739	p.N247D	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXP1	HGNC	ENSG00000114861				99	0	0	56	15	21.1268
FAM86DP	0	genome.wustl.edu	37	3	75475685	75475685	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	75475685	75475685	A	G	SNP	FAM86DP	ENST00000459803	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.028	-	-	-	no_errors	FAM86DP	HGNC	ENSG00000244026				90	0	0	62	4	6.06061
SSUH2	0	genome.wustl.edu	37	3	8675523	8675523	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	8675523	8675523	G	A	SNP	SSUH2	ENST00000317371	human	ensembl	74_37	-1	known	silent	c.102	p.G34	0.000	NULL	superfamily_HSP_DnaJ_Cys-rich_dom	-	no_errors	SSUH2	HGNC	ENSG00000125046				45	0	0	43	7	14
PROS1	0	genome.wustl.edu	37	3	93605255	93605255	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	93605255	93605255	C	T	SNP	PROS1	ENST00000394236	human	ensembl	74_37	-1	known	silent	c.1248	p.P416	0.072	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	PROS1	HGNC	ENSG00000184500				174	0	0	109	33	23.2394
EPHA6	0	genome.wustl.edu	37	3	96706798	96706798	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	96706798	96706798	T	C	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	missense	c.1075	p.C359R	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224				78	0	0	39	20	33.8983
CENPE	0	genome.wustl.edu	37	4	104065724	104065724	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	104065724	104065724	T	C	SNP	CENPE	ENST00000265148	human	ensembl	74_37	-1	known	missense	c.4909	p.N1637D	0.001	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778				59	0	0	31	13	29.5455
SEC24B	0	genome.wustl.edu	37	4	110384496	110384496	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	110384496	110384496	C	T	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	silent	c.573	p.A191	0.403	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802				252	0	0	150	65	30.2326
FAT4	0	genome.wustl.edu	37	4	126370871	126370871	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	126370871	126370871	T	C	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	silent	c.8700	p.D2900	0.999	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				127	0	0	79	33	29.4643
NKX3-2	0	genome.wustl.edu	37	4	13545921	13545921	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	13545921	13545921	C	T	SNP	NKX3-2	ENST00000382438	human	ensembl	74_37	-1	known	missense	c.118	p.A40T	0.978	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX3-2	HGNC	ENSG00000109705				9	0	0	1	4	80
MGARP	0	genome.wustl.edu	37	4	140188117	140188117	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	140188117	140188117	A	G	SNP	MGARP	ENST00000398955	human	ensembl	74_37	-1	known	missense	c.359	p.V120A	0.000	NULL	NULL	-	no_errors	MGARP	HGNC	ENSG00000137463				222	0	0	124	60	32.6087
SH3D19	0	genome.wustl.edu	37	4	152069209	152069209	+	Silent	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	152069209	152069209	A	T	SNP	SH3D19	ENST00000304527	human	ensembl	74_37	-1	known	silent	c.1107	p.S369	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain	-	no_errors	SH3D19	HGNC	ENSG00000109686				105	0	0	56	28	33.3333
FSTL5	0	genome.wustl.edu	37	4	162307519	162307519	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	162307519	162307519	A	G	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	silent	c.1924	p.L642	1.000	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843				52	0	0	28	16	36.3636
TRIM61	0	genome.wustl.edu	37	4	165891048	165891048	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	165891048	165891048	C	T	SNP	TRIM61	ENST00000329314	human	ensembl	74_37	-1	known	missense	c.107	p.C36Y	0.993	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,smart_Znf_RING,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM61	HGNC	ENSG00000183439				64	0	0	44	14	24.1379
KLHL2	0	genome.wustl.edu	37	4	166238988	166238988	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	166238988	166238988	A	G	SNP	KLHL2	ENST00000226725	human	ensembl	74_37	+1	known	silent	c.1620	p.A540	0.999	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL2	HGNC	ENSG00000109466				111	0	0	56	21	27.2727
IRF2	0	genome.wustl.edu	37	4	185310135	185310135	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	185310135	185310135	C	T	SNP	IRF2	ENST00000393593	human	ensembl	74_37	-1	known	missense	c.827	p.G276D	1.000	pirsf_Interferon_reg_fac-1/2	pfam_Interferon_reg_fact_DNA-bd_dom,smart_Interferon_reg_fact_DNA-bd_dom,pirsf_Interferon_reg_fac-1/2,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF2	HGNC	ENSG00000168310				217	0	0	98	48	32.8767
KIAA1430	0	genome.wustl.edu	37	4	186112044	186112044	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	186112044	186112044	A	T	SNP	KIAA1430	ENST00000296775	human	ensembl	74_37	-1	known	missense	c.307	p.L103M	0.000	NULL	NULL	-	no_errors	KIAA1430	HGNC	ENSG00000164323				21	0	0	17	6	26.087
MTNR1A	0	genome.wustl.edu	37	4	187454886	187454886	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	187454886	187454886	G	T	SNP	MTNR1A	ENST00000307161	human	ensembl	74_37	-1	known	missense	c.1010	p.P337Q	0.997	prints_Mel_1A_rcpt,prints_Mel_rcpt_1C	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melatonin_rcpt,prints_GPCR_Rhodpsn,prints_Mel_1A_rcpt,prints_NPY_rcpt,prints_Mel_rcpt_1C	-	no_errors	MTNR1A	HGNC	ENSG00000168412				129	0	0	66	43	39.4495
FAT1	0	genome.wustl.edu	37	4	187534385	187534385	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	187534385	187534385	G	A	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.9341	p.T3114M	0.388	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				72	0	0	76	4	5
SLIT2	0	genome.wustl.edu	37	4	20512694	20512694	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	20512694	20512694	T	C	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.992	p.L331P	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				68	0	0	36	29	44.6154
ZFYVE28	0	genome.wustl.edu	37	4	2306598	2306598	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	2306598	2306598	C	T	SNP	ZFYVE28	ENST00000290974	human	ensembl	74_37	-1	known	missense	c.1469	p.G490D	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE28	HGNC	ENSG00000159733				80	0	0	56	30	34.8837
C4orf19	0	genome.wustl.edu	37	4	37592069	37592069	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	37592069	37592069	C	T	SNP	C4orf19	ENST00000284437	human	ensembl	74_37	+1	known	missense	c.392	p.P131L	0.002	NULL	NULL	-	no_errors	C4orf19	HGNC	ENSG00000154274				111	0	0	76	36	32.1429
TLR6	0	genome.wustl.edu	37	4	38830420	38830420	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	38830420	38830420	C	T	SNP	TLR6	ENST00000381950	human	ensembl	74_37	-1	known	silent	c.675	p.L225	0.886	pirsf_Toll-like_receptor	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,pfam_Cys-rich_flank_reg_C,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR6	HGNC	ENSG00000174130				52	0	0	30	13	30.2326
PIGG	0	genome.wustl.edu	37	4	533012	533012	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	533012	533012	G	A	SNP	PIGG	ENST00000453061	human	ensembl	74_37	+1	known	missense	c.2806	p.V936I	0.065	NULL	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGG	HGNC	ENSG00000174227				96	0	0	34	24	41.3793
SRD5A3	0	genome.wustl.edu	37	4	56236103	56236103	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	56236103	56236103	G	A	SNP	SRD5A3	ENST00000264228	human	ensembl	74_37	+1	known	missense	c.802	p.V268I	0.981	pfam_3-oxo-5_a-steroid_4-DH_C,pfscan_3-oxo-5_a-steroid_4-DH_C	pfam_3-oxo-5_a-steroid_4-DH_C,pfscan_3-oxo-5_a-steroid_4-DH_C	-	no_errors	SRD5A3	HGNC	ENSG00000128039				103	0	0	61	33	35.1064
EVC2	0	genome.wustl.edu	37	4	5696067	5696067	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	5696067	5696067	G	A	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.445	p.R149C	0.003	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				78	0	0	30	18	37.5
NOA1	0	genome.wustl.edu	37	4	57843591	57843591	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	57843591	57843591	T	G	SNP	NOA1	ENST00000264230	human	ensembl	74_37	-1	known	missense	c.161	p.Y54S	0.000	NULL	superfamily_P-loop_NTPase	-	no_errors	NOA1	HGNC	ENSG00000084092				79	0	0	59	25	29.7619
UBA6-AS1	0	genome.wustl.edu	37	4	68928686	68928686	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	68928686	68928686	G	A	SNP	UBA6-AS1	ENST00000500538	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.131	-	-	-	no_errors	UBA6-AS1	HGNC	ENSG00000248049				152	0	0	87	49	36.0294
CCDC96	0	genome.wustl.edu	37	4	7043818	7043818	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	7043818	7043818	G	A	SNP	CCDC96	ENST00000310085	human	ensembl	74_37	-1	known	missense	c.848	p.A283V	0.104	NULL	NULL	-	no_errors	CCDC96	HGNC	ENSG00000173013				215	0	0	134	35	20.7101
AFM	0	genome.wustl.edu	37	4	74367503	74367503	+	Splice_Site	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	74367503	74367503	G	T	SNP	AFM	ENST00000226355	human	ensembl	74_37	+1	known	splice_site	c.1647-1	e13-1	0.996	-	-	-	no_errors	AFM	HGNC	ENSG00000079557				33	0	0	24	10	29.4118
CXCL10	0	genome.wustl.edu	37	4	76943854	76943854	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	76943854	76943854	C	T	SNP	CXCL10	ENST00000306602	human	ensembl	74_37	-1	known	missense	c.178	p.V60I	0.674	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	CXCL10	HGNC	ENSG00000169245				112	0	0	61	30	32.967
HPSE	0	genome.wustl.edu	37	4	84234371	84234371	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	84234371	84234371	G	A	SNP	HPSE	ENST00000311412	human	ensembl	74_37	-1	known	missense	c.569	p.A190V	0.996	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE	HGNC	ENSG00000173083				85	0	0	45	8	15.0943
WDFY3	0	genome.wustl.edu	37	4	85708812	85708812	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	85708812	85708812	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.3724	p.V1242M	1.000	superfamily_ConA-like_lec_gl_sf	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625				55	0	0	34	13	27.6596
CPZ	0	genome.wustl.edu	37	4	8621094	8621094	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	8621094	8621094	G	A	SNP	CPZ	ENST00000360986	human	ensembl	74_37	+1	known	missense	c.1709	p.R570Q	0.036	superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Frizzled_dom,superfamily_Frizzled_dom,superfamily_CarboxyPept-like_regulatory,smart_Frizzled_dom,smart_Peptidase_M14,prints_Peptidase_M14,pfscan_Frizzled_dom	-	no_errors	CPZ	HGNC	ENSG00000109625				60	0	0	34	13	27.6596
ABCG2	0	genome.wustl.edu	37	4	89034590	89034590	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	89034590	89034590	G	A	SNP	ABCG2	ENST00000237612	human	ensembl	74_37	-1	known	silent	c.1059	p.S353	0.000	NULL	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCG2	HGNC	ENSG00000118777				167	0	0	87	38	30.4
PPM1K	0	genome.wustl.edu	37	4	89199582	89199582	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	89199582	89199582	G	A	SNP	PPM1K	ENST00000608933	human	ensembl	74_37	-1	known	missense	c.154	p.P52S	0.173	NULL	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1K	HGNC	ENSG00000163644				60	0	0	35	30	46.1538
MMRN1	0	genome.wustl.edu	37	4	90857091	90857091	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	90857091	90857091	A	G	SNP	MMRN1	ENST00000264790	human	ensembl	74_37	+1	known	missense	c.2260	p.T754A	0.000	NULL	pfam_C1q,pfam_EMI_domain,pfam_EG-like_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MMRN1	HGNC	ENSG00000138722				53	0	0	38	16	29.6296
GRID2	0	genome.wustl.edu	37	4	94376916	94376916	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	94376916	94376916	G	A	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	missense	c.1649	p.R550Q	1.000	pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208				126	0	0	74	35	32.1101
TMEM175	0	genome.wustl.edu	37	4	951613	951613	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	951613	951613	G	A	SNP	TMEM175	ENST00000264771	human	ensembl	74_37	+1	known	missense	c.844	p.E282K	0.999	pfam_DUF1211_TMEM175	pfam_DUF1211_TMEM175	-	no_errors	TMEM175	HGNC	ENSG00000127419				113	0	0	67	30	30.9278
BMPR1B	0	genome.wustl.edu	37	4	96052573	96052573	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	96052573	96052573	C	T	SNP	BMPR1B	ENST00000440890	human	ensembl	74_37	+1	known	missense	c.1076	p.A359V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	BMPR1B	HGNC	ENSG00000138696				86	0	0	61	29	32.2222
METAP1	0	genome.wustl.edu	37	4	99960602	99960602	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	99960602	99960602	C	T	SNP	METAP1	ENST00000296411	human	ensembl	74_37	+1	known	nonsense	c.418	p.R140*	1.000	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,tigrfam_Pept_M24A_MAP1	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP1	-	no_errors	METAP1	HGNC	ENSG00000164024				91	0	0	50	15	23.0769
WDR36	0	genome.wustl.edu	37	5	110446959	110446959	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	110446959	110446959	A	C	SNP	WDR36	ENST00000506538	human	ensembl	74_37	+1	known	missense	c.1866	p.Q622H	1.000	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_SSU_processome_Utp21,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR36	HGNC	ENSG00000134987				207	0	0	96	49	33.7931
APC	0	genome.wustl.edu	37	5	112176209	112176209	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	112176209	112176209	C	T	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.4918	p.R1640W	0.657	pfam_APC_Cys-rich_rpt	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				127	1	0.78125	73	22	23.1579
SEMA6A	0	genome.wustl.edu	37	5	115782634	115782634	+	Missense_Mutation	SNP	T	T	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	115782634	115782634	T	A	SNP	SEMA6A	ENST00000257414	human	ensembl	74_37	-1	known	missense	c.2819	p.N940I	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6A	HGNC	ENSG00000092421				85	0	0	51	15	22.7273
TERT	0	genome.wustl.edu	37	5	1255409	1255409	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	1255409	1255409	C	A	SNP	TERT	ENST00000310581	human	ensembl	74_37	-1	known	missense	c.3150	p.K1050N	1.000	NULL	pfam_Telomerase_RBD,pfam_RVT,smart_Telomerase_RBD,pfscan_RVT,prints_Telomerase_RT	-	no_errors	TERT	HGNC	ENSG00000164362				29	0	0	21	5	19.2308
ALDH7A1	0	genome.wustl.edu	37	5	125912806	125912806	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	125912806	125912806	G	A	SNP	ALDH7A1	ENST00000409134	human	ensembl	74_37	-1	known	silent	c.615	p.N205	0.745	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH7A1	HGNC	ENSG00000164904				75	0	0	35	15	30
ISOC1	0	genome.wustl.edu	37	5	128440935	128440935	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	128440935	128440935	G	T	SNP	ISOC1	ENST00000173527	human	ensembl	74_37	+1	known	missense	c.487	p.G163C	1.000	pfam_Isochorismatase-like,superfamily_Isochorismatase-like	pfam_Isochorismatase-like,superfamily_Isochorismatase-like	-	no_errors	ISOC1	HGNC	ENSG00000066583				80	0	0	38	8	17.3913
CHSY3	0	genome.wustl.edu	37	5	129521238	129521238	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	129521238	129521238	A	G	SNP	CHSY3	ENST00000305031	human	ensembl	74_37	+1	known	silent	c.2403	p.Q801	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY3	HGNC	ENSG00000198108				105	0	0	60	26	30.2326
RAPGEF6	0	genome.wustl.edu	37	5	130828390	130828390	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	130828390	130828390	T	C	SNP	RAPGEF6	ENST00000509018	human	ensembl	74_37	-1	known	missense	c.1616	p.E539G	1.000	pfam_PDZ,superfamily_Ras_GEF_dom,superfamily_PDZ,pfscan_PDZ	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987				80	0	0	49	25	33.7838
RAPGEF6	0	genome.wustl.edu	37	5	130828445	130828445	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	130828445	130828445	C	T	SNP	RAPGEF6	ENST00000509018	human	ensembl	74_37	-1	known	missense	c.1561	p.A521T	1.000	superfamily_Ras_GEF_dom,superfamily_PDZ,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987				62	0	0	36	20	35.7143
TRPC7-AS2	0	genome.wustl.edu	37	5	135651494	135651494	+	RNA	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	135651494	135651494	T	C	SNP	TRPC7-AS2	ENST00000513958	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.988	-	-	-	no_errors	TRPC7-AS2	HGNC	ENSG00000250947				28	0	0	11	5	31.25
REEP2	0	genome.wustl.edu	37	5	137780982	137780982	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	137780982	137780982	C	T	SNP	REEP2	ENST00000378339	human	ensembl	74_37	+1	known	silent	c.483	p.D161	0.870	NULL	pfam_TB2_DP1_HVA22	-	no_errors	REEP2	HGNC	ENSG00000132563				74	0	0	42	26	38.2353
EGR1	0	genome.wustl.edu	37	5	137803521	137803521	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	137803521	137803521	G	A	SNP	EGR1	ENST00000239938	human	ensembl	74_37	+1	known	silent	c.1383	p.P461	0.243	pfam_DUF3432	pfam_DUF3432,pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR1	HGNC	ENSG00000120738				71	0	0	57	18	24
CTNNA1	0	genome.wustl.edu	37	5	138269735	138269735	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	138269735	138269735	C	T	SNP	CTNNA1	ENST00000302763	human	ensembl	74_37	+1	known	missense	c.2678	p.P893L	0.998	NULL	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA1	HGNC	ENSG00000044115				59	0	0	32	15	31.9149
DNAH5	0	genome.wustl.edu	37	5	13919426	13919426	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	13919426	13919426	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	silent	c.834	p.A278	0.001	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				241	0	0	121	51	29.6512
PCDHA5	0	genome.wustl.edu	37	5	140202594	140202594	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140202594	140202594	C	A	SNP	PCDHA5	ENST00000529859	human	ensembl	74_37	+1	known	missense	c.1234	p.L412M	0.037	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965				262	0	0	179	55	23.5043
PCDHA7	0	genome.wustl.edu	37	5	140215588	140215588	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140215588	140215588	G	T	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	silent	c.1620	p.A540	0.972	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963				208	0	0	141	76	35.023
PCDHA11	0	genome.wustl.edu	37	5	140250524	140250524	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140250524	140250524	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	silent	c.1836	p.P612	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158				116	0	0	72	42	36.8421
PCDHB4	0	genome.wustl.edu	37	5	140501700	140501700	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140501700	140501700	C	T	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	silent	c.120	p.S40	0.002	pfam_Cadherin_N,superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818				82	0	0	56	21	27.2727
PCDHB16	0	genome.wustl.edu	37	5	140564111	140564111	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140564111	140564111	C	T	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	silent	c.1977	p.H659	0.088	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963				105	0	0	74	44	37.2881
PCDHB10	0	genome.wustl.edu	37	5	140573523	140573523	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140573523	140573523	C	T	SNP	PCDHB10	ENST00000239446	human	ensembl	74_37	+1	known	silent	c.1398	p.P466	0.882	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB10	HGNC	ENSG00000120324				235	0	0	250	79	24.0122
PCDHGB2	0	genome.wustl.edu	37	5	140741226	140741226	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140741226	140741226	C	T	SNP	PCDHGB2	ENST00000522605	human	ensembl	74_37	+1	known	silent	c.1524	p.S508	0.094	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB2	HGNC	ENSG00000253910				81	0	0	54	20	27.027
PCDHGA7	0	genome.wustl.edu	37	5	140762765	140762765	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140762765	140762765	C	T	SNP	PCDHGA7	ENST00000518325	human	ensembl	74_37	+1	known	missense	c.299	p.A100V	0.073	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA7	HGNC	ENSG00000253537				85	0	0	45	14	23.7288
FCHSD1	0	genome.wustl.edu	37	5	141020111	141020111	+	RNA	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	141020111	141020111	C	T	SNP	FCHSD1	ENST00000523856	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FCHSD1	HGNC	ENSG00000197948				20	0	0	7	5	41.6667
SLC6A3	0	genome.wustl.edu	37	5	1422074	1422074	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	1422074	1422074	G	A	SNP	SLC6A3	ENST00000270349	human	ensembl	74_37	-1	known	missense	c.709	p.R237W	0.989	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_dopamine	-	no_errors	SLC6A3	HGNC	ENSG00000142319				106	0	0	64	42	39.6226
SPINK5	0	genome.wustl.edu	37	5	147480951	147480951	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	147480951	147480951	A	G	SNP	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	silent	c.1254	p.E418	0.948	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710				33	0	0	21	10	32.2581
SH3TC2	0	genome.wustl.edu	37	5	148422396	148422396	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	148422396	148422396	G	A	SNP	SH3TC2	ENST00000515425	human	ensembl	74_37	-1	known	silent	c.390	p.Y130	0.954	NULL	pfam_SH3_domain,pfam_TPR_1,superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC2	HGNC	ENSG00000169247				102	0	0	56	22	28.2051
CCDC69	0	genome.wustl.edu	37	5	150603603	150603603	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	150603603	150603603	G	A	SNP	CCDC69	ENST00000521308	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	CCDC69	HGNC	ENSG00000198624				13	0	0	10	9	47.3684
GM2A	0	genome.wustl.edu	37	5	150646383	150646383	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	150646383	150646383	G	A	SNP	GM2A	ENST00000357164	human	ensembl	74_37	+1	known	missense	c.335	p.C112Y	1.000	smart_ML_dom	smart_ML_dom	-	no_errors	GM2A	HGNC	ENSG00000196743				118	0	0	59	31	34.4444
CYFIP2	0	genome.wustl.edu	37	5	156752567	156752567	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	156752567	156752567	A	G	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	missense	c.1978	p.I660V	1.000	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163				29	0	0	18	16	47.0588
FBXL7	0	genome.wustl.edu	37	5	15928475	15928475	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	15928475	15928475	C	T	SNP	FBXL7	ENST00000504595	human	ensembl	74_37	+1	known	nonsense	c.604	p.R202*	0.997	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL7	HGNC	ENSG00000183580				38	0	0	24	9	27.2727
TENM2	0	genome.wustl.edu	37	5	167545433	167545433	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	167545433	167545433	C	A	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	silent	c.1950	p.S650	1.000	pfam_EGF_extracell,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934				255	0	0	130	72	35.6436
CDHR2	0	genome.wustl.edu	37	5	176004677	176004677	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	176004677	176004677	G	A	SNP	CDHR2	ENST00000261944	human	ensembl	74_37	+1	known	missense	c.1390	p.A464T	0.842	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR2	HGNC	ENSG00000074276				87	0	0	46	23	33.3333
UIMC1	0	genome.wustl.edu	37	5	176397788	176397788	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	176397788	176397788	C	T	SNP	UIMC1	ENST00000377219	human	ensembl	74_37	-1	known	silent	c.312	p.E104	0.992	NULL	smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	-	no_errors	UIMC1	HGNC	ENSG00000087206				146	0	0	70	39	35.7798
NSD1	0	genome.wustl.edu	37	5	176710894	176710894	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	176710894	176710894	G	A	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	missense	c.6116	p.R2039H	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671				164	0	0	90	45	33.3333
DBN1	0	genome.wustl.edu	37	5	176885651	176885651	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	176885651	176885651	T	C	SNP	DBN1	ENST00000292385	human	ensembl	74_37	-1	known	missense	c.1190	p.Q397R	0.992	NULL	pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin	-	no_errors	DBN1	HGNC	ENSG00000113758				26	0	0	7	6	46.1538
RUFY1	0	genome.wustl.edu	37	5	178994485	178994485	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	178994485	178994485	C	T	SNP	RUFY1	ENST00000319449	human	ensembl	74_37	+1	known	missense	c.626	p.A209V	1.000	pfam_Run,smart_Run,pfscan_Run	pfam_Run,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,smart_Run,smart_Znf_FYVE,pfscan_Run,pfscan_Znf_FYVE-rel,pfscan_Znf_RING	-	no_errors	RUFY1	HGNC	ENSG00000176783				61	0	0	24	21	46.6667
DROSHA	0	genome.wustl.edu	37	5	31407020	31407020	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	31407020	31407020	C	T	SNP	DROSHA	ENST00000344624	human	ensembl	74_37	-1	known	missense	c.3887	p.R1296Q	1.000	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	pfam_RNase_III_dom,pfam_dsRNA-bd_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DROSHA	HGNC	ENSG00000113360				81	0	0	39	14	26.4151
DROSHA	0	genome.wustl.edu	37	5	31526886	31526886	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	31526886	31526886	G	A	SNP	DROSHA	ENST00000344624	human	ensembl	74_37	-1	known	nonsense	c.154	p.Q52*	1.000	NULL	pfam_RNase_III_dom,pfam_dsRNA-bd_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DROSHA	HGNC	ENSG00000113360				35	0	0	19	7	26.9231
C5orf42	0	genome.wustl.edu	37	5	37164384	37164384	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	37164384	37164384	C	T	SNP	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	missense	c.7579	p.V2527I	0.818	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603				61	0	0	31	11	26.1905
FYB	0	genome.wustl.edu	37	5	39202605	39202605	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	39202605	39202605	G	A	SNP	FYB	ENST00000540520	human	ensembl	74_37	-1	known	missense	c.488	p.P163L	0.028	NULL	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain	-	no_errors	FYB	HGNC	ENSG00000082074				108	0	0	60	38	38.7755
FGF10	0	genome.wustl.edu	37	5	44388550	44388550	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	44388550	44388550	A	C	SNP	FGF10	ENST00000264664	human	ensembl	74_37	-1	known	missense	c.235	p.W79G	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF10	HGNC	ENSG00000070193				78	0	0	43	18	29.5082
KIAA0947	0	genome.wustl.edu	37	5	5466528	5466528	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	5466528	5466528	G	A	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.5974	p.A1992T	0.996	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				49	0	0	32	9	21.9512
PLK2	0	genome.wustl.edu	37	5	57753096	57753096	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	57753096	57753096	G	A	SNP	PLK2	ENST00000274289	human	ensembl	74_37	-1	known	missense	c.920	p.A307V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK2	HGNC	ENSG00000145632				56	0	0	23	15	39.4737
ADAMTS6	0	genome.wustl.edu	37	5	64466574	64466574	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	64466574	64466574	C	T	SNP	ADAMTS6	ENST00000381055	human	ensembl	74_37	-1	known	silent	c.3114	p.Q1038	0.999	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS6	HGNC	ENSG00000049192				75	0	0	40	22	35.4839
BDP1	0	genome.wustl.edu	37	5	70812075	70812075	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	70812075	70812075	A	T	SNP	BDP1	ENST00000358731	human	ensembl	74_37	+1	known	missense	c.4837	p.T1613S	0.062	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	BDP1	HGNC	ENSG00000145734				26	0	0	18	4	18.1818
PTCD2	0	genome.wustl.edu	37	5	71638851	71638851	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	71638851	71638851	C	T	SNP	PTCD2	ENST00000308077	human	ensembl	74_37	+1	known	silent	c.816	p.C272	0.227	NULL	pfam_Ribosomal_S27_mit,tigrfam_Pentatricopeptide_repeat	-	no_errors	PTCD2	HGNC	ENSG00000049883				58	0	0	28	10	26.3158
PAPD4	0	genome.wustl.edu	37	5	78964728	78964728	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	78964728	78964728	C	T	SNP	PAPD4	ENST00000296783	human	ensembl	74_37	+1	known	missense	c.1085	p.P362L	1.000	NULL	pfam_PAP_assoc	-	no_errors	PAPD4	HGNC	ENSG00000164329				177	0	0	93	52	35.8621
CMYA5	0	genome.wustl.edu	37	5	79031946	79031946	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	79031946	79031946	C	T	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	missense	c.7358	p.P2453L	0.014	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				66	0	0	27	17	38.6364
GPR98	0	genome.wustl.edu	37	5	89949385	89949385	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	89949385	89949385	G	A	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.3994	p.G1332R	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				26	0	0	13	9	40.9091
FAM184A	0	genome.wustl.edu	37	6	119345439	119345439	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	119345439	119345439	C	T	SNP	FAM184A	ENST00000338891	human	ensembl	74_37	-1	known	missense	c.699	p.M233I	0.000	NULL	superfamily_Prefoldin	-	no_errors	FAM184A	HGNC	ENSG00000111879				68	0	0	46	19	29.2308
RNF217	0	genome.wustl.edu	37	6	125404057	125404057	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	125404057	125404057	C	T	SNP	RNF217	ENST00000560949	human	ensembl	74_37	+1	known	nonsense	c.898	p.R300*	0.994	NULL	pfam_Znf_C6HC,smart_Znf_C6HC	-	no_errors	RNF217	HGNC	ENSG00000146373				39	0	0	12	7	36.8421
RANBP9	0	genome.wustl.edu	37	6	13634728	13634728	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	13634728	13634728	G	A	SNP	RANBP9	ENST00000011619	human	ensembl	74_37	-1	known	missense	c.1730	p.S577F	1.000	NULL	pfam_SPRY_rcpt,pfam_CTLH/CRA,pfam_LisH_dimerisation_subgr,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_LisH_dimerisation,smart_CTLH_C,smart_CRA_dom,pfscan_B30.2/SPRY,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	RANBP9	HGNC	ENSG00000010017				61	0	0	36	11	23.4043
IFNGR1	0	genome.wustl.edu	37	6	137540418	137540418	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	137540418	137540418	C	T	SNP	IFNGR1	ENST00000367739	human	ensembl	74_37	-1	known	missense	c.47	p.R16K	0.006	NULL	pfam_Interferon_gamma_pox/mammal,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,prints_Interferon_gamma_rcpt_asu	-	no_errors	IFNGR1	HGNC	ENSG00000027697				25	0	0	13	11	45.8333
HIVEP2	0	genome.wustl.edu	37	6	143093660	143093660	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	143093660	143093660	C	A	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	missense	c.2216	p.R739M	0.903	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				67	0	0	43	17	28.3333
SASH1	0	genome.wustl.edu	37	6	148761499	148761499	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	148761499	148761499	G	A	SNP	SASH1	ENST00000367467	human	ensembl	74_37	+1	known	silent	c.342	p.S114	0.002	NULL	pfam_rSAM/SH3_domain-containing,pfam_SAM_2,pfam_SAM_type1,pfam_SH3_2,superfamily_SAM/pointed,superfamily_SH3_domain,smart_SH3_domain,smart_SAM,pfscan_SAM	-	no_errors	SASH1	HGNC	ENSG00000111961				105	0	0	54	29	34.9398
KATNA1	0	genome.wustl.edu	37	6	149916287	149916287	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	149916287	149916287	T	C	SNP	KATNA1	ENST00000335647	human	ensembl	74_37	-1	known	missense	c.1361	p.H454R	1.000	pfam_Vps4_C,superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	KATNA1	HGNC	ENSG00000186625				70	0	0	46	21	31.3433
SYNE1	0	genome.wustl.edu	37	6	152621778	152621778	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	152621778	152621778	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	nonsense	c.17680	p.Q5894*	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				36	0	0	29	14	32.5581
SYNE1	0	genome.wustl.edu	37	6	152640107	152640107	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	152640107	152640107	C	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.16280	p.S5427I	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				44	0	0	28	8	22.2222
JARID2	0	genome.wustl.edu	37	6	15520474	15520474	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	15520474	15520474	T	C	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.3733	p.S1245P	0.986	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				88	0	0	56	15	21.1268
ARID1B	0	genome.wustl.edu	37	6	157528046	157528046	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	157528046	157528046	G	T	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	missense	c.5891	p.R1964M	0.623	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618				137	1	0.724638	134	9	6.29371
T	0	genome.wustl.edu	37	6	166580164	166580164	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	166580164	166580164	C	T	SNP	T	ENST00000296946	human	ensembl	74_37	-1	known	silent	c.387	p.S129	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_Brachyury,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	T	HGNC	ENSG00000164458				117	0	0	44	27	38.0282
TBP	0	genome.wustl.edu	37	6	170871064	170871064	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	170871064	170871064	G	A	SNP	TBP	ENST00000230354	human	ensembl	74_37	+1	known	silent	c.240	p.Q80	1.000	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592				34	0	0	38	7	15.5556
TBP	0	genome.wustl.edu	37	6	170871070	170871070	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	170871070	170871070	G	A	SNP	TBP	ENST00000230354	human	ensembl	74_37	+1	known	silent	c.246	p.Q82	1.000	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592				37	0	0	29	10	25.641
HIST1H1E	0	genome.wustl.edu	37	6	26156941	26156941	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	26156941	26156941	A	G	SNP	HIST1H1E	ENST00000304218	human	ensembl	74_37	+1	known	missense	c.323	p.N108S	1.000	pfam_Histone_H1/H5_H15,prints_Histone_H5	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1E	HGNC	ENSG00000168298				66	0	0	50	17	25.3731
ZSCAN16	0	genome.wustl.edu	37	6	28093420	28093420	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	28093420	28093420	C	T	SNP	ZSCAN16	ENST00000340487	human	ensembl	74_37	+1	known	missense	c.199	p.R67C	0.056	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN16	HGNC	ENSG00000196812				274	0	0	160	70	30.4348
SCAND3	0	genome.wustl.edu	37	6	28543300	28543300	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	28543300	28543300	C	T	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	silent	c.1182	p.L394	1.000	pfam_Integrase_cat-core,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040				96	0	0	63	26	29.2135
OR10C1	0	genome.wustl.edu	37	6	29408447	29408447	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	29408447	29408447	C	T	SNP	OR10C1	ENST00000444197	human	ensembl	74_37	+1	known	missense	c.655	p.R219C	0.000	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR10C1	HGNC	ENSG00000206474				223	0	0	122	66	35.1064
C6orf47	0	genome.wustl.edu	37	6	31627249	31627249	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	31627249	31627249	C	T	SNP	C6orf47	ENST00000375911	human	ensembl	74_37	-1	known	missense	c.476	p.R159Q	0.804	NULL	NULL	-	no_errors	C6orf47	HGNC	ENSG00000204439				113	0	0	64	29	31.1828
TNXB	0	genome.wustl.edu	37	6	32029205	32029205	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	32029205	32029205	G	A	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	silent	c.7461	p.R2487	0.421	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				163	1	0.609756	94	52	35.6164
BRD2	0	genome.wustl.edu	37	6	32947844	32947844	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	32947844	32947844	C	A	SNP	BRD2	ENST00000395289	human	ensembl	74_37	+1	known	missense	c.2186	p.S729Y	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD2	HGNC	ENSG00000204256				68	0	0	40	22	35.4839
B3GALT4	0	genome.wustl.edu	37	6	33245676	33245676	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	33245676	33245676	G	T	SNP	B3GALT4	ENST00000451237	human	ensembl	74_37	+1	known	missense	c.480	p.W160C	1.000	pfam_Glyco_trans_31	pfam_Glyco_trans_31	-	no_errors	B3GALT4	HGNC	ENSG00000235863				153	0	0	78	28	26.4151
ITPR3	0	genome.wustl.edu	37	6	33608274	33608274	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	33608274	33608274	C	T	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.103	p.R35C	1.000	pfam_Ins145_P3_rcpt	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				253	0	0	117	61	34.2697
LEMD2	0	genome.wustl.edu	37	6	33740534	33740534	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	33740534	33740534	C	A	SNP	LEMD2	ENST00000293760	human	ensembl	74_37	-1	known	missense	c.1383	p.W461C	1.000	pfam_Inner-Nucl-membr_MAN1	pfam_Inner-Nucl-membr_MAN1,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom	-	no_errors	LEMD2	HGNC	ENSG00000161904				42	0	0	21	13	38.2353
TCP11	0	genome.wustl.edu	37	6	35088313	35088313	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	35088313	35088313	G	A	SNP	TCP11	ENST00000311875	human	ensembl	74_37	-1	known	missense	c.865	p.P289S	0.012	pfam_Tcp11	pfam_Tcp11	-	no_errors	TCP11	HGNC	ENSG00000124678				107	0	0	67	36	34.9515
DNAH8	0	genome.wustl.edu	37	6	38840716	38840716	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	38840716	38840716	G	T	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	silent	c.6621	p.V2207	0.354	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				52	0	0	34	18	34.6154
DNAH8	0	genome.wustl.edu	37	6	38942265	38942265	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	38942265	38942265	C	T	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.12143	p.P4048L	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				104	0	0	49	24	32.8767
LRFN2	0	genome.wustl.edu	37	6	40359938	40359938	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	40359938	40359938	C	T	SNP	LRFN2	ENST00000338305	human	ensembl	74_37	-1	known	missense	c.2114	p.R705Q	0.874	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN2	HGNC	ENSG00000156564				12	0	0	12	10	45.4545
TBCC	0	genome.wustl.edu	37	6	42712855	42712855	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	42712855	42712855	G	A	SNP	TBCC	ENST00000244625	human	ensembl	74_37	-1	known	silent	c.957	p.D319	1.000	pfam_Tubulin-bd_cofactor_C_dom	pfam_Tubulin-bd_cofactor_C_dom,smart_CARP_motif	-	no_errors	TBCC	HGNC	ENSG00000124659				79	0	0	39	17	30.3571
GLTSCR1L	0	genome.wustl.edu	37	6	42796578	42796578	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	42796578	42796578	G	A	SNP	GLTSCR1L	ENST00000314073	human	ensembl	74_37	+1	known	silent	c.507	p.T169	0.998	NULL	NULL	-	no_errors	GLTSCR1L	HGNC	ENSG00000112624				183	0	0	111	48	30.1887
CUL7	0	genome.wustl.edu	37	6	43020085	43020085	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	43020085	43020085	C	T	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	missense	c.598	p.A200T	1.000	superfamily_ARM-type_fold	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090				58	0	0	41	14	25.4545
CUL9	0	genome.wustl.edu	37	6	43192089	43192089	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	43192089	43192089	A	G	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	missense	c.7460	p.N2487S	0.998	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659				47	0	0	30	16	34.7826
HMGCLL1	0	genome.wustl.edu	37	6	55443799	55443799	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	55443799	55443799	G	A	SNP	HMGCLL1	ENST00000398661	human	ensembl	74_37	-1	known	missense	c.55	p.R19W	1.000	NULL	pfam_PYR_CT,pfscan_PYR_CT	-	no_errors	HMGCLL1	HGNC	ENSG00000146151				35	0	0	15	7	31.8182
PHF3	0	genome.wustl.edu	37	6	64410356	64410356	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	64410356	64410356	T	C	SNP	PHF3	ENST00000262043	human	ensembl	74_37	+1	known	silent	c.3099	p.H1033	0.989	pfam_TFIIS_cen_dom	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	PHF3	HGNC	ENSG00000118482				51	0	0	30	15	33.3333
DSP	0	genome.wustl.edu	37	6	7569500	7569500	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	7569500	7569500	G	A	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.1501	p.V501I	1.000	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				128	0	0	70	38	35.1852
DSP	0	genome.wustl.edu	37	6	7580631	7580631	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	7580631	7580631	G	T	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.4208	p.R1403M	1.000	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696				101	0	0	54	35	39.3258
SNRNP48	0	genome.wustl.edu	37	6	7595261	7595261	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	7595261	7595261	T	C	SNP	SNRNP48	ENST00000342415	human	ensembl	74_37	+1	known	silent	c.333	p.N111	1.000	NULL	pfam_TRM13/UPF0224_CHHC_Znf_dom	-	no_errors	SNRNP48	HGNC	ENSG00000168566				75	0	0	20	20	50
RNGTT	0	genome.wustl.edu	37	6	89616132	89616132	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	89616132	89616132	C	T	SNP	RNGTT	ENST00000369485	human	ensembl	74_37	-1	known	missense	c.395	p.R132H	1.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,pirsf_mRNA_cap_enz_bifunc,pfscan_Tyr/Dual-sp_Pase	pfam_mRNA_cap_enzyme,pfam_mRNA_cap_enzyme_C,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_NA-bd_OB-fold,pirsf_mRNA_cap_enz_bifunc,pfscan_Tyr/Dual-sp_Pase	-	no_errors	RNGTT	HGNC	ENSG00000111880				40	0	0	26	7	21.2121
PNRC1	0	genome.wustl.edu	37	6	89793839	89793839	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	89793839	89793839	G	C	SNP	PNRC1	ENST00000336032	human	ensembl	74_37	+1	known	missense	c.908	p.S303T	0.045	NULL	NULL	-	no_errors	PNRC1	HGNC	ENSG00000146278				104	0	0	50	31	38.2716
MDN1	0	genome.wustl.edu	37	6	90461182	90461182	+	Missense_Mutation	SNP	G	G	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	90461182	90461182	G	C	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.3195	p.N1065K	1.000	superfamily_P-loop_NTPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				59	0	0	29	19	39.5833
BACH2	0	genome.wustl.edu	37	6	90647937	90647937	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	90647937	90647937	G	A	SNP	BACH2	ENST00000257749	human	ensembl	74_37	-1	known	missense	c.1969	p.R657C	1.000	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	pfam_BTB_POZ,pfam_bZIP,superfamily_BTB/POZ_fold,superfamily_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH2	HGNC	ENSG00000112182				94	0	0	54	33	37.931
TSC22D4	0	genome.wustl.edu	37	7	100064709	100064709	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	100064709	100064709	C	T	SNP	TSC22D4	ENST00000300181	human	ensembl	74_37	-1	known	missense	c.1061	p.R354Q	1.000	pfam_TSC-22_Dip_Bun	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D4	HGNC	ENSG00000166925				67	0	0	40	16	28.5714
PCOLCE	0	genome.wustl.edu	37	7	100201580	100201580	+	Splice_Site	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	100201580	100201580	A	G	SNP	PCOLCE	ENST00000223061	human	ensembl	74_37	+1	known	splice_site	c.205-2	e3-2	1.000	-	-	-	no_errors	PCOLCE	HGNC	ENSG00000106333				82	0	0	57	38	40
ZAN	0	genome.wustl.edu	37	7	100369603	100369603	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	100369603	100369603	G	T	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.5385	p.Q1795H	0.129	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839				30	0	0	36	9	20
ACHE	0	genome.wustl.edu	37	7	100489954	100489954	+	Splice_Site	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	100489954	100489954	C	T	SNP	ACHE	ENST00000302913	human	ensembl	74_37	-1	known	splice_site	c.1553+1	e2+1	1.000	-	-	-	no_errors	ACHE	HGNC	ENSG00000087085				66	0	0	51	13	20.3125
PLOD3	0	genome.wustl.edu	37	7	100853686	100853686	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	100853686	100853686	G	A	SNP	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	missense	c.1540	p.R514W	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397				49	0	0	23	21	47.7273
LHFPL3	0	genome.wustl.edu	37	7	103969672	103969672	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	103969672	103969672	G	A	SNP	LHFPL3	ENST00000535008	human	ensembl	74_37	+1	known	missense	c.445	p.G149S	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL3	HGNC	ENSG00000187416				89	0	0	71	23	24.4681
PHF14	0	genome.wustl.edu	37	7	11091407	11091407	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	11091407	11091407	G	T	SNP	PHF14	ENST00000403050	human	ensembl	74_37	+1	known	silent	c.2481	p.T827	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF14	HGNC	ENSG00000106443				37	0	0	26	3	10.3448
C7orf60	0	genome.wustl.edu	37	7	112462111	112462111	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	112462111	112462111	A	T	SNP	C7orf60	ENST00000297145	human	ensembl	74_37	-1	known	missense	c.906	p.F302L	1.000	pfam_DUF3321	pfam_DUF3321	-	no_errors	C7orf60	HGNC	ENSG00000164603				88	0	0	51	52	50.4854
MET	0	genome.wustl.edu	37	7	116381017	116381017	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	116381017	116381017	C	T	SNP	MET	ENST00000318493	human	ensembl	74_37	+1	known	nonsense	c.1639	p.R547*	0.039	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MET	HGNC	ENSG00000105976				136	1	0.729927	82	75	47.7707
TSPAN12	0	genome.wustl.edu	37	7	120428948	120428948	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	120428948	120428948	A	C	SNP	TSPAN12	ENST00000222747	human	ensembl	74_37	-1	known	missense	c.616	p.C206G	1.000	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN12	HGNC	ENSG00000106025				65	0	0	27	30	52.6316
TSPAN12	0	genome.wustl.edu	37	7	120455798	120455798	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	120455798	120455798	A	G	SNP	TSPAN12	ENST00000222747	human	ensembl	74_37	-1	known	silent	c.345	p.Y115	0.997	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN12	HGNC	ENSG00000106025				41	0	0	21	4	16
IQUB	0	genome.wustl.edu	37	7	123119935	123119935	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	123119935	123119935	T	C	SNP	IQUB	ENST00000324698	human	ensembl	74_37	-1	known	missense	c.1324	p.T442A	1.000	NULL	pfam_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	IQUB	HGNC	ENSG00000164675				63	0	0	55	14	20.2899
FLNC	0	genome.wustl.edu	37	7	128470736	128470736	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	128470736	128470736	C	T	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	silent	c.45	p.G15	0.948	NULL	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591				46	0	0	33	11	25
FLNC	0	genome.wustl.edu	37	7	128493858	128493858	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	128493858	128493858	G	A	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	missense	c.6451	p.G2151S	1.000	NULL	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591				52	0	0	55	10	15.3846
MGAM	0	genome.wustl.edu	37	7	141750592	141750592	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	141750592	141750592	C	A	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	missense	c.2733	p.S911R	0.001	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335				78	0	0	39	24	38.0952
OR2A5	0	genome.wustl.edu	37	7	143748314	143748314	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	143748314	143748314	C	A	SNP	OR2A5	ENST00000408906	human	ensembl	74_37	+1	known	missense	c.820	p.L274I	0.577	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2A5	HGNC	ENSG00000221836				137	0	0	104	41	28.2759
DGKB	0	genome.wustl.edu	37	7	14775710	14775710	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	14775710	14775710	T	C	SNP	DGKB	ENST00000258767	human	ensembl	74_37	-1	known	missense	c.278	p.H93R	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKB	HGNC	ENSG00000136267				22	0	0	13	4	23.5294
ZNF467	0	genome.wustl.edu	37	7	149461869	149461869	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	149461869	149461869	G	A	SNP	ZNF467	ENST00000302017	human	ensembl	74_37	-1	known	silent	c.1722	p.D574	0.131	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF467	HGNC	ENSG00000181444				22	0	0	19	25	56.8182
ZNF862	0	genome.wustl.edu	37	7	149558562	149558562	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	149558562	149558562	G	T	SNP	ZNF862	ENST00000223210	human	ensembl	74_37	+1	known	silent	c.2313	p.A771	0.012	superfamily_RNaseH-like_dom	pfam_Krueppel-associated_box,pfam_HATC_dom_C,superfamily_Krueppel-associated_box,superfamily_RNaseH-like_dom,smart_Krueppel-associated_box,smart_Znf_TTF,pfscan_Krueppel-associated_box	-	no_errors	ZNF862	HGNC	ENSG00000106479				34	0	0	21	30	58.8235
ZNF775	0	genome.wustl.edu	37	7	150094403	150094403	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	150094403	150094403	G	A	SNP	ZNF775	ENST00000329630	human	ensembl	74_37	+1	known	silent	c.834	p.P278	0.998	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF775	HGNC	ENSG00000196456				21	0	0	20	20	50
ATG9B	0	genome.wustl.edu	37	7	150720577	150720577	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	150720577	150720577	C	T	SNP	ATG9B	ENST00000377974	human	ensembl	74_37	-1	known	missense	c.614	p.R205Q	1.000	NULL	pfam_Autophagy-rel_prot_9	-	no_errors	ATG9B	HGNC	ENSG00000181652				23	0	0	3	19	86.3636
KMT2C	0	genome.wustl.edu	37	7	151879153	151879153	+	Nonsense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	151879153	151879153	G	T	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	nonsense	c.5792	p.S1931*	0.106	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				137	0	0	65	88	57.5163
FAM20C	0	genome.wustl.edu	37	7	195728	195728	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	195728	195728	C	T	SNP	FAM20C	ENST00000313766	human	ensembl	74_37	+1	known	silent	c.780	p.S260	0.938	NULL	pfam_DUF1193	-	no_errors	FAM20C	HGNC	ENSG00000177706				89	0	0	18	46	71.875
FAM126A	0	genome.wustl.edu	37	7	22985387	22985387	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	22985387	22985387	G	T	SNP	FAM126A	ENST00000432176	human	ensembl	74_37	-1	known	missense	c.1387	p.P463T	0.996	NULL	pfam_Hyccin	-	no_errors	FAM126A	HGNC	ENSG00000122591				83	0	0	99	37	27.2059
C7orf31	0	genome.wustl.edu	37	7	25194757	25194757	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	25194757	25194757	G	A	SNP	C7orf31	ENST00000283905	human	ensembl	74_37	-1	known	silent	c.468	p.R156	0.000	NULL	NULL	-	no_errors	C7orf31	HGNC	ENSG00000153790				81	0	0	79	19	19.3878
GHRHR	0	genome.wustl.edu	37	7	31014105	31014105	+	Splice_Site	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	31014105	31014105	G	A	SNP	GHRHR	ENST00000326139	human	ensembl	74_37	+1	known	splice_site	c.812+1	e8+1	0.997	-	-	-	no_errors	GHRHR	HGNC	ENSG00000106128				75	0	0	42	51	54.8387
NT5C3A	0	genome.wustl.edu	37	7	33055402	33055402	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	33055402	33055402	G	A	SNP	NT5C3A	ENST00000242210	human	ensembl	74_37	-1	known	silent	c.789	p.F263	1.000	pfam_Pyrimidine_nucleotidase_eu,superfamily_HAD-like_dom,tigrfam_Pyrimidine_nucleotidase_eu	pfam_Pyrimidine_nucleotidase_eu,superfamily_HAD-like_dom,tigrfam_Pyrimidine_nucleotidase_eu	-	no_errors	NT5C3A	HGNC	ENSG00000122643				40	0	0	54	19	26.0274
BBS9	0	genome.wustl.edu	37	7	33545232	33545232	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	33545232	33545232	C	T	SNP	BBS9	ENST00000242067	human	ensembl	74_37	+1	known	missense	c.2273	p.P758L	0.998	NULL	NULL	-	no_errors	BBS9	HGNC	ENSG00000122507				51	0	0	39	31	44.2857
EEPD1	0	genome.wustl.edu	37	7	36194050	36194050	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	36194050	36194050	G	A	SNP	EEPD1	ENST00000242108	human	ensembl	74_37	+1	known	silent	c.117	p.R39	1.000	superfamily_RuvA_2-like,tigrfam_Competence_ComEA_HhH	pfam_HhH_motif,pfam_Endo/exonuclease/phosphatase,pfam_GspK,superfamily_Endo/exonuclease/phosphatase,superfamily_RuvA_2-like,smart_Hlx-hairpin-Hlx_DNA-bd_motif,tigrfam_Competence_ComEA_HhH	-	no_errors	EEPD1	HGNC	ENSG00000122547				162	0	0	143	41	22.2826
MIR1200	0	genome.wustl.edu	37	7	36959035	36959035	+	RNA	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	36959035	36959035	G	T	SNP	MIR1200	ENST00000408398	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR1200	HGNC	ENSG00000221325				27	0	0	32	8	20
AMPH	0	genome.wustl.edu	37	7	38433753	38433753	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	38433753	38433753	G	A	SNP	AMPH	ENST00000356264	human	ensembl	74_37	-1	known	missense	c.1460	p.A487V	0.002	NULL	pfam_BAR_dom,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_Amphiphysin,prints_Amphiphysin_1,prints_SH3_domain	-	no_errors	AMPH	HGNC	ENSG00000078053				130	0	0	126	15	10.6383
GLI3	0	genome.wustl.edu	37	7	42116409	42116409	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	42116409	42116409	C	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.415	p.A139T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				74	0	0	50	9	15.2542
SDK1	0	genome.wustl.edu	37	7	4273010	4273010	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	4273010	4273010	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.5951	p.A1984V	0.001	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				96	0	0	25	47	65.2778
NUDCD3	0	genome.wustl.edu	37	7	44425629	44425629	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	44425629	44425629	G	A	SNP	NUDCD3	ENST00000355451	human	ensembl	74_37	-1	known	missense	c.1067	p.P356L	1.000	NULL	pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	NUDCD3	HGNC	ENSG00000015676				71	0	0	52	24	31.5789
MYO1G	0	genome.wustl.edu	37	7	45015133	45015133	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	45015133	45015133	A	C	SNP	MYO1G	ENST00000258787	human	ensembl	74_37	-1	known	missense	c.514	p.F172V	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO1G	HGNC	ENSG00000136286				45	0	0	22	31	58.4906
TNS3	0	genome.wustl.edu	37	7	47344520	47344520	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	47344520	47344520	C	T	SNP	TNS3	ENST00000311160	human	ensembl	74_37	-1	known	missense	c.2732	p.R911Q	0.995	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS3	HGNC	ENSG00000136205				41	0	0	33	9	21.4286
PKD1L1	0	genome.wustl.edu	37	7	47944770	47944770	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	47944770	47944770	G	A	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	missense	c.1675	p.L559F	0.213	superfamily_PKD_dom,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683				85	0	0	31	49	61.25
ABCA13	0	genome.wustl.edu	37	7	48313025	48313025	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	48313025	48313025	G	T	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.3762	p.E1254D	0.055	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869				16	0	0	26	8	23.5294
ABCA13	0	genome.wustl.edu	37	7	48335320	48335320	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	48335320	48335320	G	A	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	silent	c.8979	p.S2993	0.001	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869				112	0	0	77	70	47.619
RBAK	0	genome.wustl.edu	37	7	5105012	5105012	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	5105012	5105012	A	G	SNP	RBAK	ENST00000353796	human	ensembl	74_37	+1	known	missense	c.1925	p.Y642C	0.774	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	RBAK	HGNC	ENSG00000146587				98	0	0	106	6	5.35714
NSUN5	0	genome.wustl.edu	37	7	72717831	72717831	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	72717831	72717831	G	A	SNP	NSUN5	ENST00000438747	human	ensembl	74_37	-1	known	silent	c.1137	p.G379	0.000	pfam_Fmu/NOL1/Nop2p	pfam_Fmu/NOL1/Nop2p,prints_RCMT	-	no_errors	NSUN5	HGNC	ENSG00000130305				29	0	0	20	19	48.7179
HIP1	0	genome.wustl.edu	37	7	75189089	75189089	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	75189089	75189089	C	A	SNP	HIP1	ENST00000336926	human	ensembl	74_37	-1	known	missense	c.1322	p.R441M	1.000	superfamily_Prefoldin	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1	HGNC	ENSG00000127946				61	0	0	44	13	22.807
SEMA3A	0	genome.wustl.edu	37	7	83823851	83823851	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	83823851	83823851	C	T	SNP	SEMA3A	ENST00000265362	human	ensembl	74_37	-1	known	missense	c.52	p.A18T	0.821	NULL	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3A	HGNC	ENSG00000075213				192	0	0	187	24	11.3744
CLDN12	0	genome.wustl.edu	37	7	90042232	90042232	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	90042232	90042232	T	C	SNP	CLDN12	ENST00000287916	human	ensembl	74_37	+1	known	missense	c.242	p.L81P	1.000	prints_Claudin12	prints_Claudin12	-	no_errors	CLDN12	HGNC	ENSG00000157224				199	0	0	174	53	23.348
CASD1	0	genome.wustl.edu	37	7	94163028	94163028	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	94163028	94163028	T	C	SNP	CASD1	ENST00000297273	human	ensembl	74_37	+1	known	missense	c.542	p.L181P	0.954	NULL	pfam_Cas1_AcylTrans_dom,superfamily_Cyclin-like	-	no_errors	CASD1	HGNC	ENSG00000127995				76	0	0	46	33	41.7722
LMTK2	0	genome.wustl.edu	37	7	97821424	97821424	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	97821424	97821424	C	T	SNP	LMTK2	ENST00000297293	human	ensembl	74_37	+1	known	silent	c.1647	p.S549	0.993	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK2	HGNC	ENSG00000164715				106	0	0	81	29	26.3636
BAIAP2L1	0	genome.wustl.edu	37	7	97984432	97984432	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	97984432	97984432	G	A	SNP	BAIAP2L1	ENST00000005260	human	ensembl	74_37	-1	known	silent	c.136	p.L46	0.998	pfam_IRSp53/MIM_homology_IMD	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2L1	HGNC	ENSG00000006453				30	0	0	28	19	40.4255
CYP3A7	0	genome.wustl.edu	37	7	99308406	99308406	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	99308406	99308406	A	G	SNP	CYP3A7	ENST00000336374	human	ensembl	74_37	-1	known	silent	c.975	p.P325	0.977	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_CYP3A,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP3A7	HGNC	ENSG00000160870				59	0	0	28	41	59.4203
TAF6	0	genome.wustl.edu	37	7	99706053	99706053	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	99706053	99706053	C	T	SNP	TAF6	ENST00000344095	human	ensembl	74_37	-1	known	silent	c.1395	p.K465	1.000	NULL	pfam_DUF1546,pfam_TAF_TATA-bd,superfamily_Histone-fold,superfamily_ARM-type_fold,smart_TAF_TATA-bd	-	no_errors	TAF6	HGNC	ENSG00000106290				134	0	0	78	77	49.6774
VPS13B	0	genome.wustl.edu	37	8	100654601	100654601	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	100654601	100654601	C	A	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	missense	c.5858	p.P1953H	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				154	0	0	127	48	27.4286
DCAF13	0	genome.wustl.edu	37	8	104427341	104427341	+	Silent	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	104427341	104427341	G	T	SNP	DCAF13	ENST00000297579	human	ensembl	74_37	+1	known	silent	c.123	p.G41	0.000	NULL	pfam_Sof1,pfam_WD40_repeat,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF13	HGNC	ENSG00000164934				84	0	0	44	31	41.3333
RIMS2	0	genome.wustl.edu	37	8	104709417	104709417	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	104709417	104709417	A	G	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	missense	c.280	p.I94V	1.000	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406				90	0	0	75	29	27.8846
RIMS2	0	genome.wustl.edu	37	8	105026793	105026793	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	105026793	105026793	G	A	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	missense	c.3284	p.R1095Q	1.000	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406				66	0	0	63	23	26.7442
KCNV1	0	genome.wustl.edu	37	8	110980792	110980792	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	110980792	110980792	T	C	SNP	KCNV1	ENST00000297404	human	ensembl	74_37	-1	known	missense	c.1028	p.Y343C	1.000	pfam_Ion_trans_dom,prints_K_chnl_volt-dep_Kv4	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv8,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv4	-	no_errors	KCNV1	HGNC	ENSG00000164794				73	0	0	52	20	27.7778
CSMD3	0	genome.wustl.edu	37	8	113314033	113314033	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	113314033	113314033	G	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.8429	p.T2810I	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				79	0	0	71	13	15.4762
CSMD3	0	genome.wustl.edu	37	8	113585761	113585761	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	113585761	113585761	C	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.4011	p.G1337	0.895	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				138	0	0	95	33	25.7812
TRPS1	0	genome.wustl.edu	37	8	116430571	116430571	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	116430571	116430571	T	C	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.2810	p.Q937R	1.000	pfam_Znf_GATA,smart_Znf_GATA,pfscan_Znf_GATA,prints_Znf_GATA	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				167	0	0	101	39	27.8571
COL14A1	0	genome.wustl.edu	37	8	121238900	121238900	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	121238900	121238900	T	C	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	silent	c.1899	p.D633	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_VWF_A,pfam_Fibronectin_type3,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL14A1	HGNC	ENSG00000187955				48	0	0	28	12	30
TBC1D31	0	genome.wustl.edu	37	8	124121565	124121565	+	Silent	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	124121565	124121565	A	G	SNP	TBC1D31	ENST00000287380	human	ensembl	74_37	+1	known	silent	c.1218	p.L406	0.854	NULL	pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom	-	no_errors	TBC1D31	HGNC	ENSG00000156787				67	0	0	45	20	30.7692
ATAD2	0	genome.wustl.edu	37	8	124359583	124359583	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	124359583	124359583	C	T	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	missense	c.1961	p.R654H	1.000	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802				127	0	0	94	28	22.9508
ATAD2	0	genome.wustl.edu	37	8	124382200	124382200	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	124382200	124382200	A	T	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	missense	c.792	p.D264E	0.676	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802				39	0	0	37	13	26
TRMT12	0	genome.wustl.edu	37	8	125464363	125464363	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	125464363	125464363	G	A	SNP	TRMT12	ENST00000328599	human	ensembl	74_37	+1	known	missense	c.1195	p.A399T	0.989	NULL	pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TRMT12	HGNC	ENSG00000183665				50	0	0	45	11	19.6429
RNF139	0	genome.wustl.edu	37	8	125499032	125499032	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	125499032	125499032	C	A	SNP	RNF139	ENST00000303545	human	ensembl	74_37	+1	known	missense	c.1142	p.S381Y	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF139	HGNC	ENSG00000170881				384	0	0	312	94	23.1527
TG	0	genome.wustl.edu	37	8	133920513	133920513	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	133920513	133920513	C	T	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	silent	c.3930	p.Y1310	0.364	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832				80	0	0	74	17	18.6813
EEF1D	0	genome.wustl.edu	37	8	144671875	144671875	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	144671875	144671875	C	T	SNP	EEF1D	ENST00000423316	human	ensembl	74_37	-1	known	missense	c.377	p.R126H	1.000	NULL	pfam_Transl_elong_fac_EF1B_bsu/dsu,pfam_EF-1_beta_acid_region_euk,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu	-	no_errors	EEF1D	HGNC	ENSG00000104529				45	0	0	39	6	13.3333
EPPK1	0	genome.wustl.edu	37	8	144940592	144940592	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	144940592	144940592	C	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.6830	p.R2277H	0.897	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				115	0	0	115	7	5.7377
PLEC	0	genome.wustl.edu	37	8	144991177	144991177	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	144991177	144991177	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.13223	p.S4408L	0.595	smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				92	0	0	67	25	27.1739
PLEC	0	genome.wustl.edu	37	8	144995188	144995188	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	144995188	144995188	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.9212	p.T3071M	0.990	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				125	0	0	104	23	18.1102
PLEC	0	genome.wustl.edu	37	8	144995398	144995398	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	144995398	144995398	T	C	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.9002	p.Y3001C	0.995	smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				150	0	0	123	39	24.0741
GPAA1	0	genome.wustl.edu	37	8	145139352	145139352	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	145139352	145139352	C	T	SNP	GPAA1	ENST00000355091	human	ensembl	74_37	+1	known	silent	c.850	p.L284	0.701	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	-	no_errors	GPAA1	HGNC	ENSG00000197858				89	0	0	85	26	23.4234
RECQL4	0	genome.wustl.edu	37	8	145738257	145738257	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	145738257	145738257	C	T	SNP	RECQL4	ENST00000428558	human	ensembl	74_37	-1	known	missense	c.2728	p.V910I	0.993	NULL	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DNA_rep_checkpnt_protein,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL4	HGNC	ENSG00000160957				12	0	0	13	3	18.75
ARHGEF10	0	genome.wustl.edu	37	8	1851600	1851600	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	1851600	1851600	G	A	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	missense	c.1879	p.E627K	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728				70	0	0	67	12	15.1899
LGI3	0	genome.wustl.edu	37	8	22005848	22005848	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	22005848	22005848	T	C	SNP	LGI3	ENST00000306317	human	ensembl	74_37	-1	known	missense	c.1472	p.Q491R	1.000	pfam_EPTP,pfscan_EAR	pfam_EPTP,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI3	HGNC	ENSG00000168481				55	0	0	47	13	21.6667
LOXL2	0	genome.wustl.edu	37	8	23198656	23198656	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	23198656	23198656	G	A	SNP	LOXL2	ENST00000389131	human	ensembl	74_37	-1	known	missense	c.592	p.R198C	1.000	superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL2	HGNC	ENSG00000134013				135	0	0	124	29	18.9542
PTK2B	0	genome.wustl.edu	37	8	27278190	27278190	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	27278190	27278190	C	T	SNP	PTK2B	ENST00000346049	human	ensembl	74_37	+1	known	missense	c.400	p.R134C	1.000	smart_Band_41_domain,pfscan_FERM_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Focal_adhesion_kin_target_dom,pfam_Prot_kinase_dom,pfam_FERM_central,superfamily_Kinase-like_dom,superfamily_Focal_adhesion_kin_target_dom,superfamily_FERM_central,smart_Band_41_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PTK2B	HGNC	ENSG00000120899				137	0	0	97	31	24.2188
PTK2B	0	genome.wustl.edu	37	8	27288462	27288462	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	27288462	27288462	G	A	SNP	PTK2B	ENST00000346049	human	ensembl	74_37	+1	known	missense	c.739	p.V247I	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Focal_adhesion_kin_target_dom,pfam_Prot_kinase_dom,pfam_FERM_central,superfamily_Kinase-like_dom,superfamily_Focal_adhesion_kin_target_dom,superfamily_FERM_central,smart_Band_41_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PTK2B	HGNC	ENSG00000120899				116	0	0	120	40	25
EXTL3	0	genome.wustl.edu	37	8	28573610	28573610	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	28573610	28573610	G	A	SNP	EXTL3	ENST00000220562	human	ensembl	74_37	+1	known	missense	c.34	p.A12T	0.692	NULL	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXTL3	HGNC	ENSG00000012232				91	0	0	63	29	31.5217
EXTL3	0	genome.wustl.edu	37	8	28608343	28608343	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	28608343	28608343	G	A	SNP	EXTL3	ENST00000220562	human	ensembl	74_37	+1	known	missense	c.2720	p.R907H	1.000	NULL	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXTL3	HGNC	ENSG00000012232				133	0	0	111	40	26.4901
CSMD1	0	genome.wustl.edu	37	8	3224595	3224595	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	3224595	3224595	T	C	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.3077	p.D1026G	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				35	0	0	20	7	25.9259
RAB11FIP1	0	genome.wustl.edu	37	8	37729956	37729956	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	37729956	37729956	C	T	SNP	RAB11FIP1	ENST00000330843	human	ensembl	74_37	-1	known	missense	c.2364	p.M788I	0.000	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP1	HGNC	ENSG00000156675				82	0	0	94	34	26.5625
KAT6A	0	genome.wustl.edu	37	8	41794925	41794925	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	41794925	41794925	G	A	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	silent	c.3201	p.I1067	0.993	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				133	1	0.746269	91	26	22.2222
KAT6A	0	genome.wustl.edu	37	8	41906483	41906483	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	41906483	41906483	C	T	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.13	p.A5T	1.000	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				192	0	0	169	53	23.8739
RNF170	0	genome.wustl.edu	37	8	42742939	42742939	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	42742939	42742939	G	A	SNP	RNF170	ENST00000527424	human	ensembl	74_37	-1	known	silent	c.69	p.S23	1.000	NULL	pfam_DUF1232,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF170	HGNC	ENSG00000120925				62	0	0	68	15	18.0723
POTEA	0	genome.wustl.edu	37	8	43155752	43155752	+	RNA	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	43155752	43155752	T	G	SNP	POTEA	ENST00000522175	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	POTEA	HGNC	ENSG00000188877				65	0	0	58	15	20.5479
PXDNL	0	genome.wustl.edu	37	8	52321056	52321056	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	52321056	52321056	C	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.3128	p.G1043D	0.791	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485				26	0	0	22	7	24.1379
PXDNL	0	genome.wustl.edu	37	8	52321771	52321771	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	52321771	52321771	G	A	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.2413	p.H805Y	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,prints_Haem_peroxidase_animal_subgr,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485				12	0	0	11	6	35.2941
RB1CC1	0	genome.wustl.edu	37	8	53596230	53596230	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	53596230	53596230	C	T	SNP	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	missense	c.248	p.R83H	1.000	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287				38	0	0	57	16	21.9178
NPBWR1	0	genome.wustl.edu	37	8	53852972	53852972	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	53852972	53852972	G	A	SNP	NPBWR1	ENST00000331251	human	ensembl	74_37	+1	known	missense	c.505	p.V169I	0.996	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Opioid_rcpt	-	no_errors	NPBWR1	HGNC	ENSG00000183729				18	0	0	16	4	20
OPRK1	0	genome.wustl.edu	37	8	54163406	54163406	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	54163406	54163406	C	T	SNP	OPRK1	ENST00000265572	human	ensembl	74_37	-1	known	silent	c.192	p.A64	0.002	prints_GPCR_Rhodpsn,prints_Somatstn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Kappa_opi_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OPRK1	HGNC	ENSG00000082556				41	0	0	51	16	23.8806
RGS20	0	genome.wustl.edu	37	8	54852152	54852152	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	54852152	54852152	G	A	SNP	RGS20	ENST00000297313	human	ensembl	74_37	+1	known	missense	c.527	p.R176Q	1.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS20	HGNC	ENSG00000147509				20	0	0	7	4	36.3636
XKR4	0	genome.wustl.edu	37	8	56015229	56015229	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	56015229	56015229	T	G	SNP	XKR4	ENST00000327381	human	ensembl	74_37	+1	known	missense	c.181	p.C61G	1.000	NULL	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC	ENSG00000206579				9	0	0	8	4	33.3333
TMEM68	0	genome.wustl.edu	37	8	56663664	56663664	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	56663664	56663664	T	C	SNP	TMEM68	ENST00000434581	human	ensembl	74_37	-1	known	silent	c.546	p.K182	1.000	pfam_Plipid/glycerol_acylTrfase	pfam_Plipid/glycerol_acylTrfase	-	no_errors	TMEM68	HGNC	ENSG00000167904				110	0	0	86	34	28.3333
BHLHE22	0	genome.wustl.edu	37	8	65493419	65493419	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	65493419	65493419	C	T	SNP	BHLHE22	ENST00000321870	human	ensembl	74_37	+1	known	silent	c.72	p.S24	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	BHLHE22	HGNC	ENSG00000180828				8	0	0	8	4	33.3333
DNAJC5B	0	genome.wustl.edu	37	8	66989062	66989062	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	66989062	66989062	A	G	SNP	DNAJC5B	ENST00000276570	human	ensembl	74_37	+1	known	missense	c.287	p.D96G	1.000	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC5B	HGNC	ENSG00000147570				114	0	0	109	31	22.1429
SULF1	0	genome.wustl.edu	37	8	70514037	70514037	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	70514037	70514037	G	A	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.1034	p.R345H	1.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573				211	0	0	182	57	23.8494
TRPA1	0	genome.wustl.edu	37	8	72967786	72967786	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	72967786	72967786	T	C	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	missense	c.1414	p.T472A	0.375	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321				87	0	0	70	15	17.6471
ESRP1	0	genome.wustl.edu	37	8	95690446	95690446	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	95690446	95690446	C	T	SNP	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	missense	c.1667	p.S556F	1.000	NULL	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413				51	0	0	61	18	22.7848
LINC00599	0	genome.wustl.edu	37	8	9760969	9760969	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	9760969	9760969	G	A	SNP	LINC00599	ENST00000385275	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00599	HGNC	ENSG00000253230				25	0	0	29	4	12.1212
TBC1D2	0	genome.wustl.edu	37	9	100961816	100961816	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	100961816	100961816	C	T	SNP	TBC1D2	ENST00000375066	human	ensembl	74_37	-1	known	silent	c.2601	p.L867	0.996	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2	HGNC	ENSG00000095383				280	0	0	163	78	32.3651
ANKS6	0	genome.wustl.edu	37	9	101518711	101518711	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	101518711	101518711	T	C	SNP	ANKS6	ENST00000375018	human	ensembl	74_37	-1	known	missense	c.2320	p.T774A	1.000	superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS6	HGNC	ENSG00000165138				110	0	0	55	19	25.6757
LPPR1	0	genome.wustl.edu	37	9	104071658	104071658	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	104071658	104071658	G	T	SNP	LPPR1	ENST00000374874	human	ensembl	74_37	+1	known	missense	c.551	p.G184V	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR1	Uniprot_gn	ENSG00000148123				79	0	0	56	29	34.1176
ALDOB	0	genome.wustl.edu	37	9	104193086	104193086	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	104193086	104193086	C	A	SNP	ALDOB	ENST00000374855	human	ensembl	74_37	-1	known	missense	c.84	p.K28N	1.000	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOB	HGNC	ENSG00000136872				77	0	0	28	19	40.4255
GRIN3A	0	genome.wustl.edu	37	9	104432344	104432344	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	104432344	104432344	T	C	SNP	GRIN3A	ENST00000361820	human	ensembl	74_37	-1	known	missense	c.2350	p.K784E	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785				77	0	0	51	24	32
FOXD4	0	genome.wustl.edu	37	9	117822	117822	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	117822	117822	G	A	SNP	FOXD4	ENST00000382500	human	ensembl	74_37	-1	known	missense	c.298	p.R100W	0.176	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4	HGNC	ENSG00000170122				208	0	0	163	30	15.544
PAPPA	0	genome.wustl.edu	37	9	119097332	119097332	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	119097332	119097332	C	T	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	missense	c.3590	p.T1197I	1.000	NULL	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752				100	0	0	67	28	29.4737
MORN5	0	genome.wustl.edu	37	9	124936889	124936889	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	124936889	124936889	G	A	SNP	MORN5	ENST00000536616	human	ensembl	74_37	+1	known	missense	c.422	p.R141H	0.168	NULL	pfam_MORN,smart_MORN	-	no_errors	MORN5	HGNC	ENSG00000185681				113	0	0	51	28	35.443
PTGS1	0	genome.wustl.edu	37	9	125152626	125152626	+	Splice_Site	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	125152626	125152626	T	C	SNP	PTGS1	ENST00000362012	human	ensembl	74_37	+1	known	splice_site	c.1444+2	e10+2	0.999	-	-	-	no_errors	PTGS1	HGNC	ENSG00000095303				29	0	0	25	12	32.4324
NR5A1	0	genome.wustl.edu	37	9	127265430	127265430	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	127265430	127265430	C	T	SNP	NR5A1	ENST00000373588	human	ensembl	74_37	-1	known	missense	c.172	p.D58N	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pirsf_Steroidogenic_factor_1,pfscan_Znf_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pirsf_Steroidogenic_factor_1,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR5A1	HGNC	ENSG00000136931				10	0	0	8	4	33.3333
SCAI	0	genome.wustl.edu	37	9	127828331	127828331	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	127828331	127828331	T	C	SNP	SCAI	ENST00000373549	human	ensembl	74_37	-1	known	silent	c.105	p.R35	0.929	pirsf_UCP013022	pfam_DUF3550,pirsf_UCP013022	-	no_errors	SCAI	HGNC	ENSG00000173611				90	0	0	38	24	38.7097
FAM102A	0	genome.wustl.edu	37	9	130710444	130710444	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	130710444	130710444	C	T	SNP	FAM102A	ENST00000373095	human	ensembl	74_37	-1	known	silent	c.522	p.T174	0.954	NULL	pfam_NT-C2	-	no_errors	FAM102A	HGNC	ENSG00000167106				86	0	0	48	26	35.1351
COQ4	0	genome.wustl.edu	37	9	131095999	131095999	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	131095999	131095999	A	G	SNP	COQ4	ENST00000461102	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.100	-	-	-	no_errors	COQ4	HGNC	ENSG00000167113				8	0	0	14	7	33.3333
NUP214	0	genome.wustl.edu	37	9	134103717	134103717	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	134103717	134103717	G	A	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.6076	p.G2026R	1.000	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883				69	0	0	34	11	24.4444
PRRC2B	0	genome.wustl.edu	37	9	134319684	134319684	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	134319684	134319684	G	A	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	silent	c.582	p.S194	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723				31	0	0	10	4	28.5714
GTF3C5	0	genome.wustl.edu	37	9	135929231	135929231	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	135929231	135929231	G	A	SNP	GTF3C5	ENST00000372108	human	ensembl	74_37	+1	known	missense	c.890	p.R297H	1.000	pfam_TF_IIIC_su-5	pfam_TF_IIIC_su-5	-	no_errors	GTF3C5	HGNC	ENSG00000148308				76	0	0	27	13	32.5
RALGDS	0	genome.wustl.edu	37	9	136031317	136031317	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	136031317	136031317	C	T	SNP	RALGDS	ENST00000542690	human	ensembl	74_37	-1	known	missense	c.232	p.V78I	0.033	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RALGDS	HGNC	ENSG00000160271				114	0	0	78	31	28.4404
SNAPC4	0	genome.wustl.edu	37	9	139274297	139274297	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	139274297	139274297	C	T	SNP	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	missense	c.2519	p.S840N	0.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684				37	0	0	22	4	15.3846
SNAPC4	0	genome.wustl.edu	37	9	139277746	139277746	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	139277746	139277746	C	T	SNP	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	silent	c.1875	p.T625	0.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684				44	0	0	25	12	32.4324
UAP1L1	0	genome.wustl.edu	37	9	139973715	139973715	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	139973715	139973715	A	G	SNP	UAP1L1	ENST00000409858	human	ensembl	74_37	+1	known	missense	c.851	p.E284G	1.000	pfam_UDPGP_trans	pfam_UDPGP_trans	-	no_errors	UAP1L1	HGNC	ENSG00000197355				56	0	0	36	8	18.1818
NELFB	0	genome.wustl.edu	37	9	140166984	140166984	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	140166984	140166984	C	T	SNP	NELFB	ENST00000343053	human	ensembl	74_37	+1	known	silent	c.1513	p.L505	1.000	pfam_COBRA1	pfam_COBRA1	-	no_errors	NELFB	HGNC	ENSG00000188986				28	0	0	17	7	29.1667
ARRDC1	0	genome.wustl.edu	37	9	140508883	140508883	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	140508883	140508883	G	A	SNP	ARRDC1	ENST00000371421	human	ensembl	74_37	+1	known	missense	c.751	p.A251T	0.348	pfam_Arrestin_C-like,superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set	-	no_errors	ARRDC1	HGNC	ENSG00000197070				154	0	0	99	43	30.2817
ADAMTSL1	0	genome.wustl.edu	37	9	18504917	18504917	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	18504917	18504917	G	A	SNP	ADAMTSL1	ENST00000327883	human	ensembl	74_37	+1	known	missense	c.154	p.G52R	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,pfam_ADAM_spacer1,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031				56	0	0	41	19	31.6667
ADAMTSL1	0	genome.wustl.edu	37	9	18777025	18777025	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	18777025	18777025	A	G	SNP	ADAMTSL1	ENST00000380548	human	ensembl	74_37	+1	novel	missense	c.2798	p.K933R	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031				92	0	0	56	31	35.6322
KIAA0020	0	genome.wustl.edu	37	9	2807900	2807900	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	2807900	2807900	A	T	SNP	KIAA0020	ENST00000397885	human	ensembl	74_37	-1	known	nonsense	c.1728	p.C576*	0.999	pfam_CPL,superfamily_ARM-type_fold	pfam_CPL,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	KIAA0020	HGNC	ENSG00000080608				55	0	0	25	11	30.5556
PTENP1	0	genome.wustl.edu	37	9	33675379	33675379	+	RNA	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	33675379	33675379	C	A	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984				21	0	0	15	6	28.5714
PTENP1	0	genome.wustl.edu	37	9	33675400	33675400	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	33675400	33675400	G	A	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984				39	0	0	27	5	15.625
KIAA1161	0	genome.wustl.edu	37	9	34372554	34372554	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	34372554	34372554	C	T	SNP	KIAA1161	ENST00000297625	human	ensembl	74_37	-1	known	missense	c.286	p.A96T	0.998	NULL	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	-	no_errors	KIAA1161	HGNC	ENSG00000164976				14	0	0	8	4	33.3333
C9orf24	0	genome.wustl.edu	37	9	34379126	34379126	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	34379126	34379126	A	G	SNP	C9orf24	ENST00000379124	human	ensembl	74_37	-1	known	missense	c.443	p.V148A	0.743	NULL	NULL	-	no_errors	C9orf24	HGNC	ENSG00000164972				76	0	0	23	14	37.8378
VCP	0	genome.wustl.edu	37	9	35059794	35059794	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	35059794	35059794	C	T	SNP	VCP	ENST00000358901	human	ensembl	74_37	-1	known	missense	c.1700	p.R567H	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	pfam_ATPase_AAA_core,pfam_CDC4_N-term_subdom,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Cdc48_dom2,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_Vps4_C,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	-	no_errors	VCP	HGNC	ENSG00000165280				84	0	0	57	17	22.973
PIGO	0	genome.wustl.edu	37	9	35091530	35091530	+	Missense_Mutation	SNP	C	C	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	35091530	35091530	C	G	SNP	PIGO	ENST00000341666	human	ensembl	74_37	-1	known	missense	c.2354	p.G785A	1.000	NULL	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGO	HGNC	ENSG00000165282				99	0	0	61	25	29.0698
SIT1	0	genome.wustl.edu	37	9	35650182	35650182	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	35650182	35650182	C	A	SNP	SIT1	ENST00000259608	human	ensembl	74_37	-1	known	missense	c.356	p.R119M	0.995	NULL	NULL	-	no_errors	SIT1	HGNC	ENSG00000137078				65	0	0	33	10	23.2558
NPR2	0	genome.wustl.edu	37	9	35792877	35792877	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	35792877	35792877	G	A	SNP	NPR2	ENST00000342694	human	ensembl	74_37	+1	known	missense	c.472	p.G158R	0.993	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	NPR2	HGNC	ENSG00000159899				124	0	0	65	34	34.3434
PGM5	0	genome.wustl.edu	37	9	71002450	71002450	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	71002450	71002450	G	T	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	missense	c.643	p.G215C	1.000	pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330				100	0	0	64	35	35.3535
MAMDC2	0	genome.wustl.edu	37	9	72741207	72741207	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	72741207	72741207	A	T	SNP	MAMDC2	ENST00000377182	human	ensembl	74_37	+1	known	missense	c.776	p.N259I	0.981	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom,prints_MAM_dom	-	no_errors	MAMDC2	HGNC	ENSG00000165072				47	0	0	31	24	43.6364
PRUNE2	0	genome.wustl.edu	37	9	79322953	79322953	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	79322953	79322953	G	A	SNP	PRUNE2	ENST00000428286	human	ensembl	74_37	-1	known	missense	c.3160	p.R1054C	0.000	NULL	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC	ENSG00000106772				42	0	0	28	18	39.1304
VPS13A	0	genome.wustl.edu	37	9	79824434	79824434	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	79824434	79824434	C	T	SNP	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	missense	c.481	p.R161C	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				26	0	0	20	9	31.0345
CEP78	0	genome.wustl.edu	37	9	80858424	80858424	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	80858424	80858424	G	A	SNP	CEP78	ENST00000376597	human	ensembl	74_37	+1	known	missense	c.650	p.R217H	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	CEP78	HGNC	ENSG00000148019				72	0	0	29	13	30.9524
ZCCHC6	0	genome.wustl.edu	37	9	88925684	88925684	+	Silent	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	88925684	88925684	T	G	SNP	ZCCHC6	ENST00000375963	human	ensembl	74_37	-1	known	silent	c.3315	p.P1105	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_U1,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC6	HGNC	ENSG00000083223				66	0	0	32	12	27.2727
S1PR3	0	genome.wustl.edu	37	9	91616486	91616486	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	91616486	91616486	C	T	SNP	S1PR3	ENST00000358157	human	ensembl	74_37	+1	known	missense	c.371	p.A124V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_EDG3_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn,prints_EDG1_rcpt,prints_Cnbnoid_rcpt	-	no_errors	S1PR3	HGNC	ENSG00000213694				109	0	0	44	24	35.2941
FGD3	0	genome.wustl.edu	37	9	95738814	95738814	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	95738814	95738814	C	T	SNP	FGD3	ENST00000337352	human	ensembl	74_37	+1	known	silent	c.276	p.C92	0.067	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD3	HGNC	ENSG00000127084				23	0	0	21	7	25
ZNF169	0	genome.wustl.edu	37	9	97062749	97062749	+	Silent	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	97062749	97062749	C	A	SNP	ZNF169	ENST00000395395	human	ensembl	74_37	+1	known	silent	c.909	p.S303	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF169	HGNC	ENSG00000175787				102	0	0	79	29	26.8519
PTCH1	0	genome.wustl.edu	37	9	98238403	98238403	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	98238403	98238403	G	A	SNP	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	silent	c.1641	p.S547	0.947	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920				30	0	0	13	12	48
ZMAT1	0	genome.wustl.edu	37	X	101138490	101138490	+	Nonsense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	101138490	101138490	C	A	SNP	ZMAT1	ENST00000372782	human	ensembl	74_37	-1	known	nonsense	c.1909	p.G637*	1.000	NULL	superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZMAT1	HGNC	ENSG00000166432				87	0	0	74	5	6.32911
PIH1D3	0	genome.wustl.edu	37	X	106482225	106482225	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	106482225	106482225	G	A	SNP	PIH1D3	ENST00000336387	human	ensembl	74_37	+1	known	missense	c.503	p.R168H	0.867	pfam_PIH	pfam_PIH	-	no_errors	PIH1D3	HGNC	ENSG00000080572				75	0	0	44	15	25.4237
FRMPD3	0	genome.wustl.edu	37	X	106843757	106843757	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	106843757	106843757	C	A	SNP	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	missense	c.2587	p.P863T	0.969	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234				52	0	0	31	18	36.7347
ACSL4	0	genome.wustl.edu	37	X	108902693	108902693	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	108902693	108902693	A	G	SNP	ACSL4	ENST00000340800	human	ensembl	74_37	-1	known	missense	c.1868	p.L623S	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL4	HGNC	ENSG00000068366				124	0	0	68	21	23.5955
KIAA1210	0	genome.wustl.edu	37	X	118222649	118222649	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	118222649	118222649	T	G	SNP	KIAA1210	ENST00000402510	human	ensembl	74_37	-1	known	missense	c.2544	p.E848D	0.016	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423				25	0	0	20	15	42.8571
GLUD2	0	genome.wustl.edu	37	X	120183165	120183165	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	120183165	120183165	A	G	SNP	GLUD2	ENST00000328078	human	ensembl	74_37	+1	known	missense	c.1627	p.I543V	1.000	smart_Glu/Leu/Phe/Val_DH_C	pfam_Glu/Leu/Phe/Val_DH_C,pfam_Glu/Leu/Phe/Val_DH_dimer_dom,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	-	no_errors	GLUD2	HGNC	ENSG00000182890				137	0	0	90	51	36.1702
IGSF1	0	genome.wustl.edu	37	X	130419306	130419306	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	130419306	130419306	C	T	SNP	IGSF1	ENST00000370903	human	ensembl	74_37	-1	known	missense	c.514	p.V172M	0.498	smart_Ig_sub,smart_Ig_sub2	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF1	HGNC	ENSG00000147255				185	0	0	116	24	17.1429
ATXN3L	0	genome.wustl.edu	37	X	13337235	13337235	+	Silent	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	13337235	13337235	A	C	SNP	ATXN3L	ENST00000380622	human	ensembl	74_37	-1	known	silent	c.819	p.T273	0.005	prints_Josephin	pfam_Josephin,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,prints_Josephin,pfscan_Josephin,pfscan_Ubiquitin-int_motif	-	no_errors	ATXN3L	HGNC	ENSG00000123594				337	0	0	212	66	23.741
SLC9A6	0	genome.wustl.edu	37	X	135067850	135067850	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	135067850	135067850	C	T	SNP	SLC9A6	ENST00000370695	human	ensembl	74_37	+1	known	silent	c.189	p.A63	0.031	prints_Na/H_exchanger_6	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A6	HGNC	ENSG00000198689				170	0	0	111	56	33.5329
MAGEC1	0	genome.wustl.edu	37	X	140996328	140996328	+	Missense_Mutation	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	140996328	140996328	A	C	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.3138	p.K1046N	0.031	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495				115	0	0	99	43	30.2817
MAGEC1	0	genome.wustl.edu	37	X	140996374	140996374	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	140996374	140996374	T	C	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.3184	p.S1062P	0.004	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495				189	0	0	103	56	35.2201
SPANXN1	0	genome.wustl.edu	37	X	144329135	144329135	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	144329135	144329135	G	T	SNP	SPANXN1	ENST00000370493	human	ensembl	74_37	+1	known	missense	c.29	p.G10V	0.046	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXN1	HGNC	ENSG00000203923				219	0	0	117	45	27.7778
MAGEA1	0	genome.wustl.edu	37	X	152482876	152482876	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	152482876	152482876	C	A	SNP	MAGEA1	ENST00000356661	human	ensembl	74_37	-1	known	missense	c.135	p.E45D	0.006	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA1	HGNC	ENSG00000198681				190	1	0.52356	111	64	36.5714
TREX2	0	genome.wustl.edu	37	X	152710795	152710795	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	152710795	152710795	G	T	SNP	TREX2	ENST00000334497	human	ensembl	74_37	-1	known	missense	c.223	p.L75I	0.822	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	TREX2	HGNC	ENSG00000183479				27	0	0	9	8	47.0588
GPR64	0	genome.wustl.edu	37	X	19028750	19028750	+	Silent	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	19028750	19028750	G	A	SNP	GPR64	ENST00000379869	human	ensembl	74_37	-1	known	silent	c.1246	p.L416	0.517	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR64	HGNC	ENSG00000173698				214	0	0	118	47	28.4848
MAP3K15	0	genome.wustl.edu	37	X	19391783	19391783	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	19391783	19391783	G	T	SNP	MAP3K15	ENST00000338883	human	ensembl	74_37	-1	known	missense	c.2804	p.P935H	0.908	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K15	HGNC	ENSG00000180815				22	0	0	11	7	38.8889
YY2	0	genome.wustl.edu	37	X	21875411	21875411	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	21875411	21875411	C	T	SNP	YY2	ENST00000429584	human	ensembl	74_37	+1	known	missense	c.809	p.A270V	0.919	smart_Znf_C2H2-like,pirsf_TF_Yin_yang	smart_Znf_C2H2-like,pirsf_TF_Yin_yang,pfscan_Znf_C2H2	-	no_errors	YY2	HGNC	ENSG00000230797				290	0	0	202	90	30.8219
PHEX	0	genome.wustl.edu	37	X	22095708	22095708	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	22095708	22095708	A	G	SNP	PHEX	ENST00000379374	human	ensembl	74_37	+1	known	missense	c.551	p.K184R	1.000	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	PHEX	HGNC	ENSG00000102174				291	1	0.342466	162	67	29.2576
ZFX	0	genome.wustl.edu	37	X	24228545	24228545	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	24228545	24228545	C	T	SNP	ZFX	ENST00000540034	human	ensembl	74_37	+1	known	silent	c.1587	p.C529	0.991	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFX	HGNC	ENSG00000005889				116	0	0	71	41	36.6071
PDK3	0	genome.wustl.edu	37	X	24523371	24523371	+	Missense_Mutation	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	24523371	24523371	T	C	SNP	PDK3	ENST00000441463	human	ensembl	74_37	+1	known	missense	c.551	p.I184T	0.998	pfam_BCDHK/PDK_N,superfamily_HATPase_ATP-bd	pfam_BCDHK/PDK_N,pfam_HATPase_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core	-	no_errors	PDK3	HGNC	ENSG00000067992				102	0	0	37	25	40.3226
GYG2	0	genome.wustl.edu	37	X	2748220	2748220	+	RNA	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	2748220	2748220	G	A	SNP	GYG2	ENST00000381161	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	GYG2	HGNC	ENSG00000056998				53	0	0	31	9	22.5
GYG2	0	genome.wustl.edu	37	X	2795326	2795326	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	2795326	2795326	C	T	SNP	GYG2	ENST00000381163	human	ensembl	74_37	+1	known	missense	c.1322	p.P441L	0.016	NULL	pfam_Glyco_trans_8	-	no_errors	GYG2	HGNC	ENSG00000056998				63	0	0	29	16	35.5556
IL1RAPL1	0	genome.wustl.edu	37	X	29959766	29959766	+	Splice_Site	SNP	A	A	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	29959766	29959766	A	C	SNP	IL1RAPL1	ENST00000302196	human	ensembl	74_37	+1	known	splice_site	c.1058-2	e8-2	0.997	-	-	-	no_errors	IL1RAPL1	HGNC	ENSG00000169306				235	0	0	107	66	38.1503
MAGEB3	0	genome.wustl.edu	37	X	30254059	30254059	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	30254059	30254059	G	T	SNP	MAGEB3	ENST00000361644	human	ensembl	74_37	+1	known	missense	c.18	p.K6N	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB3	HGNC	ENSG00000198798				68	0	0	42	18	30
DMD	0	genome.wustl.edu	37	X	32717315	32717315	+	Missense_Mutation	SNP	G	G	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	32717315	32717315	G	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.745	p.Q249K	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				114	0	0	87	7	7.44681
TMEM47	0	genome.wustl.edu	37	X	34675058	34675058	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	34675058	34675058	G	A	SNP	TMEM47	ENST00000275954	human	ensembl	74_37	-1	known	missense	c.89	p.A30V	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	TMEM47	HGNC	ENSG00000147027				10	0	0	7	4	36.3636
CXorf22	0	genome.wustl.edu	37	X	35969461	35969461	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	35969461	35969461	C	T	SNP	CXorf22	ENST00000297866	human	ensembl	74_37	+1	known	silent	c.870	p.A290	0.004	NULL	superfamily_PapD-like	-	no_errors	CXorf22	HGNC	ENSG00000165164				36	0	0	16	8	33.3333
SYTL5	0	genome.wustl.edu	37	X	37955458	37955458	+	Missense_Mutation	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	37955458	37955458	A	G	SNP	SYTL5	ENST00000456733	human	ensembl	74_37	+1	known	missense	c.1033	p.S345G	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL5	HGNC	ENSG00000147041				110	0	0	59	32	35.1648
USP9X	0	genome.wustl.edu	37	X	41069787	41069787	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	41069787	41069787	C	T	SNP	USP9X	ENST00000324545	human	ensembl	74_37	+1	known	missense	c.5041	p.R1681C	0.984	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP9X	HGNC	ENSG00000124486				109	0	0	63	21	25
CXorf36	0	genome.wustl.edu	37	X	45013320	45013320	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	45013320	45013320	C	T	SNP	CXorf36	ENST00000398000	human	ensembl	74_37	-1	known	missense	c.796	p.D266N	1.000	NULL	NULL	-	no_errors	CXorf36	HGNC	ENSG00000147113				130	0	0	64	23	26.4368
ZNF157	0	genome.wustl.edu	37	X	47272096	47272096	+	Silent	SNP	T	T	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	47272096	47272096	T	C	SNP	ZNF157	ENST00000377073	human	ensembl	74_37	+1	known	silent	c.624	p.H208	0.973	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF157	HGNC	ENSG00000147117				68	0	0	36	20	35.7143
UXT	0	genome.wustl.edu	37	X	47516675	47516675	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	47516675	47516675	C	T	SNP	UXT	ENST00000335890	human	ensembl	74_37	-1	known	missense	c.299	p.R100H	0.974	pfam_Prefoldin_subunit_alpha,superfamily_Prefoldin	pfam_Prefoldin_subunit_alpha,superfamily_Prefoldin,prints_PFD_UXT	-	no_errors	UXT	HGNC	ENSG00000126756				23	0	0	10	5	33.3333
ZNF630	0	genome.wustl.edu	37	X	47919007	47919007	+	Missense_Mutation	SNP	T	T	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	47919007	47919007	T	G	SNP	ZNF630	ENST00000409324	human	ensembl	74_37	-1	known	missense	c.824	p.K275T	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF630	HGNC	ENSG00000221994				103	0	0	57	33	36.6667
FOXP3	0	genome.wustl.edu	37	X	49108062	49108062	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	49108062	49108062	C	T	SNP	FOXP3	ENST00000557224	human	ensembl	74_37	-1	putative	silent	c.1104	p.G368	0.053	smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP3	HGNC	ENSG00000049768				23	0	0	16	4	20
MAGED1	0	genome.wustl.edu	37	X	51638746	51638746	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	51638746	51638746	G	A	SNP	MAGED1	ENST00000375695	human	ensembl	74_37	+1	known	missense	c.811	p.D271N	0.039	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222				23	0	0	19	10	34.4828
RIBC1	0	genome.wustl.edu	37	X	53453324	53453324	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	53453324	53453324	C	T	SNP	RIBC1	ENST00000375327	human	ensembl	74_37	+1	known	missense	c.100	p.R34W	1.000	pfam_RIB43A	pfam_RIB43A	-	no_errors	RIBC1	HGNC	ENSG00000158423				21	0	0	15	3	16.6667
RRAGB	0	genome.wustl.edu	37	X	55748700	55748700	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	55748700	55748700	C	T	SNP	RRAGB	ENST00000262850	human	ensembl	74_37	+1	known	missense	c.208	p.R70C	1.000	pfam_Gtr1_RagA,superfamily_P-loop_NTPase	pfam_Gtr1_RagA,pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase	-	no_errors	RRAGB	HGNC	ENSG00000083750				88	0	0	49	21	30
NLGN4X	0	genome.wustl.edu	37	X	5821694	5821694	+	Missense_Mutation	SNP	G	G	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	5821694	5821694	G	A	SNP	NLGN4X	ENST00000381093	human	ensembl	74_37	-1	known	missense	c.1085	p.P362L	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC	ENSG00000146938				124	0	0	86	35	28.9256
EDA2R	0	genome.wustl.edu	37	X	65824948	65824948	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	65824948	65824948	C	A	SNP	EDA2R	ENST00000253392	human	ensembl	74_37	-1	known	missense	c.208	p.V70F	0.996	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_27	-	no_errors	EDA2R	HGNC	ENSG00000131080				26	0	0	18	5	21.7391
XIST	0	genome.wustl.edu	37	X	73064010	73064010	+	RNA	SNP	A	A	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	73064010	73064010	A	G	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				183	1	0.543478	95	42	30.6569
TAF9B	0	genome.wustl.edu	37	X	77387182	77387182	+	Silent	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	77387182	77387182	C	T	SNP	TAF9B	ENST00000341864	human	ensembl	74_37	-1	known	silent	c.681	p.S227	1.000	NULL	pfam_TFIID-31,superfamily_Histone-fold	-	no_errors	TAF9B	HGNC	ENSG00000187325				156	0	0	104	46	30.6667
TAF9B	0	genome.wustl.edu	37	X	77393320	77393320	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	77393320	77393320	C	T	SNP	TAF9B	ENST00000341864	human	ensembl	74_37	-1	known	missense	c.331	p.A111T	0.969	pfam_TFIID-31	pfam_TFIID-31,superfamily_Histone-fold	-	no_errors	TAF9B	HGNC	ENSG00000187325				94	0	0	66	20	23.2558
FAM133A	0	genome.wustl.edu	37	X	92965080	92965080	+	Missense_Mutation	SNP	A	A	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	92965080	92965080	A	T	SNP	FAM133A	ENST00000322139	human	ensembl	74_37	+1	known	missense	c.662	p.K221I	0.524	NULL	NULL	-	no_errors	FAM133A	HGNC	ENSG00000179083				23	0	0	25	13	34.2105
RPA4	0	genome.wustl.edu	37	X	96139979	96139979	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	96139979	96139979	C	T	SNP	RPA4	ENST00000373040	human	ensembl	74_37	+1	known	missense	c.670	p.R224W	0.004	pfam_RPA_C,pirsf_RPA32	pfam_RPA_C,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,pirsf_RPA32	-	no_errors	RPA4	HGNC	ENSG00000204086				141	0	0	83	33	28.4483
TBL1X	0	genome.wustl.edu	37	X	9661211	9661211	+	Missense_Mutation	SNP	C	C	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	9661211	9661211	C	T	SNP	TBL1X	ENST00000217964	human	ensembl	74_37	+1	known	missense	c.914	p.T305M	0.998	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL1X	HGNC	ENSG00000101849				171	0	0	83	46	35.6589
SHROOM2	0	genome.wustl.edu	37	X	9864116	9864116	+	Missense_Mutation	SNP	C	C	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	9864116	9864116	C	A	SNP	SHROOM2	ENST00000380913	human	ensembl	74_37	+1	known	missense	c.2168	p.T723N	0.000	pfam_ASD1	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM2	HGNC	ENSG00000146950				29	0	0	19	14	42.4242
UBE4B	0	genome.wustl.edu	37	1	10190819	10190819	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	10190819	10190819	A	-	DEL	UBE4B	ENST00000343090	human	ensembl	74_37	+1	known	frame_shift_del	c.1859	p.N621fs	1.000	pfam_Ub_conjug_fac_E4_core	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4B	HGNC	ENSG00000130939				196	0	0	92	31	25.2033
ATXN7L2	0	genome.wustl.edu	37	1	110035319	110035319	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	110035319	110035319	T	-	DEL	ATXN7L2	ENST00000459635	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ATXN7L2	HGNC	ENSG00000162650				32	0	0	38	11	22.449
EPS8L3	0	genome.wustl.edu	37	1	110300580	110300580	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	110300580	110300580	T	-	DEL	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	frame_shift_del	c.821	p.N274fs	0.352	NULL	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758				163	0	0	76	47	38.2114
AP4B1-AS1	0	genome.wustl.edu	37	1	114400196	114400196	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	114400196	114400196	A	-	DEL	AP4B1-AS1	ENST00000419536	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AP4B1-AS1	HGNC	ENSG00000226167				13	0	0	10	5	33.3333
SYCP1	0	genome.wustl.edu	37	1	115537601	115537601	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	115537601	115537601	A	-	DEL	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	frame_shift_del	c.2892	p.K967fs	1.000	NULL	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765				63	0	0	31	31	50
MXRA8	0	genome.wustl.edu	37	1	1290110	1290110	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	1290110	1290110	G	-	DEL	MXRA8	ENST00000445648	human	ensembl	74_37	-1	known	frame_shift_del	c.901	p.R301fs	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	MXRA8	HGNC	ENSG00000162576				27	0	0	9	15	62.5
TPM3	0	genome.wustl.edu	37	1	154144674	154144674	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	154144674	154144674	A	-	DEL	TPM3	ENST00000469717	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TPM3	HGNC	ENSG00000143549				41	0	0	46	13	22.0339
FCRL5	0	genome.wustl.edu	37	1	157490981	157490981	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	157490981	157490981	G	-	DEL	FCRL5	ENST00000356953	human	ensembl	74_37	-1	known	frame_shift_del	c.2341	p.L781fs	0.604	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL5	HGNC	ENSG00000143297				117	0	0	64	23	26.4368
NIT1	0	genome.wustl.edu	37	1	161090341	161090342	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	161090341	161090342	CA	-	DEL	NIT1	ENST00000368009	human	ensembl	74_37	+1	known	frame_shift_del	c.770_771	p.Q258fs	1.000:0.999	superfamily_C-N_Hydrolase,pfscan_C-N_Hydrolase	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pfscan_C-N_Hydrolase	-	no_errors	NIT1	HGNC	ENSG00000158793				85	0	0	53	24	31.1688
DEDD	0	genome.wustl.edu	37	1	161091815	161091818	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	161091815	161091818	AAAA	-	DEL	DEDD	ENST00000486041	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000:1.000:1.000	-	-	-	no_errors	DEDD	HGNC	ENSG00000158796				31	0	0	21	8	27.5862
NPHS2	0	genome.wustl.edu	37	1	179528881	179528881	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	179528881	179528881	A	-	DEL	NPHS2	ENST00000367615	human	ensembl	74_37	-1	known	frame_shift_del	c.467	p.L156fs	1.000	pfam_Band_7,smart_Band_7	pfam_Band_7,smart_Band_7,prints_Stomatin	-	no_errors	NPHS2	HGNC	ENSG00000116218				15	0	0	8	3	27.2727
USP48	0	genome.wustl.edu	37	1	22033369	22033370	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	22033369	22033370	-	A	INS	USP48	ENST00000529637	human	ensembl	74_37	-1	novel	frame_shift_ins	c.1992_1991	p.L664fs	0.002:0.003	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67,pfscan_Ubiquitin_supergroup	-	no_errors	USP48	HGNC	ENSG00000090686				67	0	0	41	7	14.5833
URB2	0	genome.wustl.edu	37	1	229772726	229772726	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	229772726	229772726	A	-	DEL	URB2	ENST00000258243	human	ensembl	74_37	+1	known	frame_shift_del	c.2366	p.I791fs	0.000	NULL	pfam_Urb2/Npa2_C	-	no_errors	URB2	HGNC	ENSG00000135763				130	0	0	71	27	27.551
B3GALNT2	0	genome.wustl.edu	37	1	235613601	235613603	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	235613601	235613603	GAG	-	DEL	B3GALNT2	ENST00000366600	human	ensembl	74_37	-1	known	in_frame_del	c.1423_1421	p.P474in_frame_del	1.000:0.126:1.000	NULL	pfam_Glyco_trans_31	-	no_errors	B3GALNT2	HGNC	ENSG00000162885				73	0	0	44	27	38.0282
OPN3	0	genome.wustl.edu	37	1	241767800	241767801	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	241767800	241767801	-	A	INS	OPN3	ENST00000366554	human	ensembl	74_37	-1	known	frame_shift_ins	c.455_454	p.S152fs	1.000:0.994	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	OPN3	HGNC	ENSG00000054277				67	0	0	37	18	32.7273
COX20	0	genome.wustl.edu	37	1	245006587	245006587	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	245006587	245006587	T	-	DEL	COX20	ENST00000391839	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	COX20	HGNC	ENSG00000203667				22	0	0	11	9	45
ZNF496	0	genome.wustl.edu	37	1	247492893	247492894	+	RNA	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	247492893	247492894	-	G	INS	ZNF496	ENST00000478225	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ZNF496	HGNC	ENSG00000162714				154	0	0	93	32	25.6
ARID1A	0	genome.wustl.edu	37	1	27105931	27105931	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	27105931	27105931	G	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.5542	p.D1850fs	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				137	0	0	83	32	27.8261
DLGAP3	0	genome.wustl.edu	37	1	35370730	35370731	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	35370730	35370731	-	C	INS	DLGAP3	ENST00000235180	human	ensembl	74_37	-1	known	frame_shift_ins	c.255_254	p.S86fs	0.928:1.000	NULL	pfam_GKAP	-	no_errors	DLGAP3	HGNC	ENSG00000116544				11	0	0	3	2	40
CLSPN	0	genome.wustl.edu	37	1	36215282	36215283	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	36215282	36215283	GA	-	DEL	CLSPN	ENST00000318121	human	ensembl	74_37	-1	known	frame_shift_del	c.2159_2158	p.S720fs	0.985:0.984	NULL	NULL	-	no_errors	CLSPN	HGNC	ENSG00000092853				79	0	0	30	21	41.1765
PPAP2B	0	genome.wustl.edu	37	1	56962089	56962089	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	56962089	56962089	T	-	DEL	PPAP2B	ENST00000472957	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.869	-	-	-	no_errors	PPAP2B	HGNC	ENSG00000162407				19	0	0	10	5	33.3333
DOCK7	0	genome.wustl.edu	37	1	62941104	62941104	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	62941104	62941104	A	-	DEL	DOCK7	ENST00000467758	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	DOCK7	HGNC	ENSG00000116641				17	0	0	12	7	36.8421
UTS2	0	genome.wustl.edu	37	1	7913491	7913491	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	7913491	7913491	T	-	DEL	UTS2	ENST00000054668	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	0.140	NULL	pfam_Urotensin_II	-	no_errors	UTS2	HGNC	ENSG00000049247				124	0	0	64	23	26.4368
TNFRSF9	0	genome.wustl.edu	37	1	7998254	7998254	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	7998254	7998254	T	-	DEL	TNFRSF9	ENST00000377507	human	ensembl	74_37	-1	known	frame_shift_del	c.345	p.G116fs	0.019	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_9	-	no_errors	TNFRSF9	HGNC	ENSG00000049249				164	0	0	74	47	38.843
PARK7	0	genome.wustl.edu	37	1	8029466	8029467	+	Splice_Site	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	8029466	8029467	-	A	INS	PARK7	ENST00000338639	human	ensembl	74_37	+1	known	splice_site_ins	c.252+2_252+1	e3+2	1.000:1.000	-	-	-	no_errors	PARK7	HGNC	ENSG00000116288				36	0	0	25	10	28.5714
ERRFI1	0	genome.wustl.edu	37	1	8074255	8074255	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	8074255	8074255	T	-	DEL	ERRFI1	ENST00000377482	human	ensembl	74_37	-1	known	frame_shift_del	c.404	p.N135fs	0.000	NULL	pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6	-	no_errors	ERRFI1	HGNC	ENSG00000116285				113	0	0	92	54	36.9863
CTBS	0	genome.wustl.edu	37	1	85020568	85020568	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	85020568	85020568	T	-	DEL	CTBS	ENST00000477677	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTBS	HGNC	ENSG00000117151				19	0	0	5	6	54.5455
ARHGAP29	0	genome.wustl.edu	37	1	94649826	94649827	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	94649826	94649827	CA	-	DEL	ARHGAP29	ENST00000260526	human	ensembl	74_37	-1	known	frame_shift_del	c.2128_2127	p.C709fs	1.000:1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	ARHGAP29	HGNC	ENSG00000137962				99	0	0	57	9	13.6364
SLC44A3	0	genome.wustl.edu	37	1	95357932	95357932	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	1	95357932	95357932	T	-	DEL	SLC44A3	ENST00000271227	human	ensembl	74_37	+1	known	frame_shift_del	c.1716	p.F574fs	0.782	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A3	HGNC	ENSG00000143036				219	0	0	126	51	28.8136
PSD	0	genome.wustl.edu	37	10	104176203	104176203	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	104176203	104176203	C	-	DEL	PSD	ENST00000020673	human	ensembl	74_37	-1	known	frame_shift_del	c.593	p.G198fs	0.774	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD	HGNC	ENSG00000059915				24	0	0	25	6	19.3548
ADD3	0	genome.wustl.edu	37	10	111893350	111893351	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	111893350	111893351	AA	-	DEL	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	frame_shift_del	c.2095_2096	p.K701fs	1.000:1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700				118	0	0	58	24	29.2683
NRAP	0	genome.wustl.edu	37	10	115348832	115348832	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	115348832	115348832	C	-	DEL	NRAP	ENST00000369358	human	ensembl	74_37	-1	known	frame_shift_del	c.5119	p.A1707fs	0.001	NULL	pfam_Nebulin_35r-motif,pfam_Znf_LIM,smart_Znf_LIM,smart_Nebulin_35r-motif,pfscan_Znf_LIM,pfscan_Nebulin_35r-motif,prints_Nebulin	-	no_errors	NRAP	HGNC	ENSG00000197893				72	0	0	59	13	18.0556
WDR11	0	genome.wustl.edu	37	10	122648731	122648731	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	122648731	122648731	A	-	DEL	WDR11	ENST00000604509	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WDR11	HGNC	ENSG00000120008				59	0	0	34	14	29.1667
C10orf137	0	genome.wustl.edu	37	10	127426891	127426891	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	127426891	127426891	A	-	DEL	C10orf137	ENST00000356792	human	ensembl	74_37	+1	known	frame_shift_del	c.1858	p.E622fs	1.000	NULL	NULL	-	no_errors	C10orf137	HGNC	ENSG00000107938				143	0	0	81	14	14.7368
ST8SIA6	0	genome.wustl.edu	37	10	17363321	17363321	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	17363321	17363321	T	-	DEL	ST8SIA6	ENST00000377602	human	ensembl	74_37	-1	known	frame_shift_del	c.753	p.A252fs	0.024	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA6	HGNC	ENSG00000148488				52	0	0	40	12	23.0769
ZNF438	0	genome.wustl.edu	37	10	31133959	31133959	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	31133959	31133959	T	-	DEL	ZNF438	ENST00000361310	human	ensembl	74_37	-1	known	frame_shift_del	c.2418	p.K806fs	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF438	HGNC	ENSG00000183621				301	0	0	178	77	30.1961
ENSG00000235939	0	genome.wustl.edu	37	10	50680934	50680934	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	50680934	50680934	A	-	DEL	ENSG00000235939	ENST00000423283	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-123B3.2	Clone_based_vega_gene	ENSG00000235939				29	0	0	12	12	50
ENSG00000231345	0	genome.wustl.edu	37	10	52417861	52417861	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	52417861	52417861	T	-	DEL	ENSG00000231345	ENST00000449695	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.690	-	-	-	no_errors	RP11-564C4.6	Clone_based_vega_gene	ENSG00000231345				22	0	0	12	5	29.4118
JMJD1C	0	genome.wustl.edu	37	10	64974641	64974641	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	64974641	64974641	T	-	DEL	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	frame_shift_del	c.1286	p.N429fs	0.977	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988				97	0	0	45	22	32.8358
SUPV3L1	0	genome.wustl.edu	37	10	70968805	70968805	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	70968805	70968805	T	-	DEL	SUPV3L1	ENST00000497254	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SUPV3L1	HGNC	ENSG00000156502				46	0	0	22	10	31.25
HKDC1	0	genome.wustl.edu	37	10	70987066	70987067	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	70987066	70987067	-	CC	INS	HKDC1	ENST00000354624	human	ensembl	74_37	+1	known	frame_shift_ins	c.167_168	p.T58fs	1.000:1.000	pfam_Hexokinase_N	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HKDC1	HGNC	ENSG00000156510				86	0	0	70	16	18.6047
C10orf54	0	genome.wustl.edu	37	10	73511467	73511467	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	73511467	73511467	G	-	DEL	C10orf54	ENST00000394957	human	ensembl	74_37	-1	known	frame_shift_del	c.856	p.L286fs	0.979	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	C10orf54	HGNC	ENSG00000107738				68	0	0	30	15	33.3333
STAMBPL1	0	genome.wustl.edu	37	10	90682146	90682146	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	10	90682146	90682146	A	-	DEL	STAMBPL1	ENST00000371927	human	ensembl	74_37	+1	known	frame_shift_del	c.1207	p.K405fs	1.000	NULL	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	STAMBPL1	HGNC	ENSG00000138134				82	0	0	44	17	27.8689
MUC6	0	genome.wustl.edu	37	11	1026400	1026401	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	1026400	1026401	-	G	INS	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	frame_shift_ins	c.2473_2472	p.E824fs	0.757:0.370	pfam_TIL_dom,superfamily_TIL_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				39	0	0	18	11	37.931
CASP5	0	genome.wustl.edu	37	11	104874011	104874011	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	104874011	104874011	T	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.572	p.N191fs	0.006	pirsf_Caspase_IL-1_beta	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757				153	1	0.649351	67	34	33.6634
CEP164	0	genome.wustl.edu	37	11	117222648	117222648	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	117222648	117222648	A	-	DEL	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	frame_shift_del	c.337	p.K116fs	1.000	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274				24	0	0	24	13	35.1351
DCPS	0	genome.wustl.edu	37	11	126215566	126215566	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	126215566	126215566	T	-	DEL	DCPS	ENST00000530860	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.463	-	-	-	no_errors	DCPS	HGNC	ENSG00000110063				61	0	0	54	25	31.6456
KRTAP5-1	0	genome.wustl.edu	37	11	1605953	1605953	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	1605953	1605953	C	-	DEL	KRTAP5-1	ENST00000382171	human	ensembl	74_37	-1	known	frame_shift_del	c.527	p.G176fs	0.999	NULL	NULL	-	no_errors	KRTAP5-1	HGNC	ENSG00000205869				185	0	0	125	29	18.8312
PIK3C2A	0	genome.wustl.edu	37	11	17190949	17190949	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	17190949	17190949	T	-	DEL	PIK3C2A	ENST00000265970	human	ensembl	74_37	-1	known	frame_shift_del	c.340	p.T114fs	0.984	NULL	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2A	HGNC	ENSG00000011405				144	0	0	93	34	26.7717
KCNA4	0	genome.wustl.edu	37	11	30033563	30033563	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	30033563	30033563	A	-	DEL	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	frame_shift_del	c.663	p.F221fs	0.902	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255				92	0	0	54	30	35.7143
KCNA4	0	genome.wustl.edu	37	11	30034059	30034059	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	30034059	30034059	C	-	DEL	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	frame_shift_del	c.167	p.G56fs	0.701	pfam_K_chnl_volt-dep_Kv1.4_TID,prints_K_chnl_volt-dep_Kv1.4	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255				103	0	0	58	27	31.7647
ACCS	0	genome.wustl.edu	37	11	44097139	44097139	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	44097139	44097139	G	-	DEL	ACCS	ENST00000263776	human	ensembl	74_37	+1	known	frame_shift_del	c.553	p.E186fs	0.981	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	ACCS	HGNC	ENSG00000110455				88	0	0	44	23	34.3284
OR51E2	0	genome.wustl.edu	37	11	4703475	4703475	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	4703475	4703475	A	-	DEL	OR51E2	ENST00000396950	human	ensembl	74_37	-1	known	frame_shift_del	c.467	p.F156fs	0.027	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51E2	HGNC	ENSG00000167332				86	0	0	61	26	29.8851
TRIM51HP	0	genome.wustl.edu	37	11	55065032	55065032	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	55065032	55065032	T	-	DEL	TRIM51HP	ENST00000526016	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.010	-	-	-	no_errors	TRIM51HP	HGNC	ENSG00000166007				49	0	0	38	11	22.449
TRIM51	0	genome.wustl.edu	37	11	55653610	55653610	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	55653610	55653610	A	-	DEL	TRIM51	ENST00000449290	human	ensembl	74_37	+1	known	frame_shift_del	c.423	p.M144fs	0.001	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM51	HGNC	ENSG00000124900				54	0	0	37	15	28.8462
CTNND1	0	genome.wustl.edu	37	11	57564070	57564070	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	57564070	57564070	G	-	DEL	CTNND1	ENST00000399050	human	ensembl	74_37	+1	known	frame_shift_del	c.562	p.G189fs	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND1	HGNC	ENSG00000198561				353	0	0	186	55	22.8216
GLYATL2	0	genome.wustl.edu	37	11	58604601	58604601	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	58604601	58604601	T	-	DEL	GLYATL2	ENST00000287275	human	ensembl	74_37	-1	known	frame_shift_del	c.363	p.K121fs	0.035	pfam_Glycine_N-acyltransferase_N,superfamily_Acyl_CoA_acyltransferase	pfam_Glycine_N-acyltransferase_N,pfam_Glycine_N-acyltransferase_C,pfam_FR47,superfamily_Acyl_CoA_acyltransferase	-	no_errors	GLYATL2	HGNC	ENSG00000156689				114	0	0	69	31	31
PPP1R14B	0	genome.wustl.edu	37	11	64014044	64014044	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	64014044	64014044	G	-	DEL	PPP1R14B	ENST00000309318	human	ensembl	74_37	-1	known	frame_shift_del	c.102	p.A36fs	1.000	NULL	pfam_PP1_inhibitor,superfamily_PP1_inhibitor	-	no_errors	PPP1R14B	HGNC	ENSG00000173457				20	0	0	8	5	38.4615
PPP2R5B	0	genome.wustl.edu	37	11	64693273	64693273	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	64693273	64693273	C	-	DEL	PPP2R5B	ENST00000164133	human	ensembl	74_37	+1	known	frame_shift_del	c.67	p.P24fs	1.000	pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5B	HGNC	ENSG00000068971				23	0	0	10	7	41.1765
SSH3	0	genome.wustl.edu	37	11	67079247	67079252	+	In_Frame_Del	DEL	GCAGGG	GCAGGG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GCAGGG	GCAGGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	67079247	67079252	GCAGGG	-	DEL	SSH3	ENST00000308127	human	ensembl	74_37	+1	known	in_frame_del	c.1869_1874	p.GQ627in_frame_del	0.905:0.925:0.918:0.902:0.899:0.881	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH3	HGNC	ENSG00000172830				97	0	0	33	16	32.6531
SHANK2	0	genome.wustl.edu	37	11	70333007	70333007	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	70333007	70333007	C	-	DEL	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	frame_shift_del	c.3394	p.D1132fs	0.148	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105				59	0	0	41	16	28.0702
ENSG00000254420	0	genome.wustl.edu	37	11	78154811	78154812	+	RNA	DEL	AA	AA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	78154811	78154812	AA	-	DEL	ENSG00000254420	ENST00000534168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.006	-	-	-	no_errors	RP11-452H21.1	Clone_based_vega_gene	ENSG00000254420				36	0	0	13	10	43.4783
CEP57	0	genome.wustl.edu	37	11	95564332	95564332	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	11	95564332	95564332	A	-	DEL	CEP57	ENST00000325542	human	ensembl	74_37	+1	known	frame_shift_del	c.1415	p.R474fs	1.000	NULL	pfam_Cep57_MT-bd_dom	-	no_errors	CEP57	HGNC	ENSG00000166037				55	0	0	29	17	36.9565
ANKS1B	0	genome.wustl.edu	37	12	100166681	100166682	+	RNA	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	100166681	100166682	-	C	INS	ANKS1B	ENST00000552472	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	ANKS1B	HGNC	ENSG00000185046				48	0	0	24	12	33.3333
GOLGA2P5	0	genome.wustl.edu	37	12	100550347	100550347	+	RNA	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	100550347	100550347	C	-	DEL	GOLGA2P5	ENST00000397112	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.243	-	-	-	no_errors	GOLGA2B	Clone_based_vega_gene	ENSG00000238105				14	0	0	4	2	33.3333
GNPTAB	0	genome.wustl.edu	37	12	102158001	102158002	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	102158001	102158002	-	T	INS	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	frame_shift_ins	c.2694_2693	p.Y899fs	1.000:1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670				198	1	0.502513	111	43	27.9221
HCFC2	0	genome.wustl.edu	37	12	104497057	104497057	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	104497057	104497057	T	-	DEL	HCFC2	ENST00000550335	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HCFC2	HGNC	ENSG00000111727				61	0	0	41	16	28.0702
MVK	0	genome.wustl.edu	37	12	110019240	110019240	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	110019240	110019240	C	-	DEL	MVK	ENST00000228510	human	ensembl	74_37	+1	known	frame_shift_del	c.412	p.A141fs	1.000	pfam_GHMP_kinase_N_dom,superfamily_Ribosomal_S5_D2-typ_fold,prints_Mevalonate/galactokinase,prints_Galkinase,tigrfam_Mev_gal_kin	pfam_GHMP_kinase_N_dom,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,prints_Mevalonate/galactokinase,prints_Galkinase,tigrfam_Mev_gal_kin	-	no_errors	MVK	HGNC	ENSG00000110921				115	0	0	72	21	22.5806
NAA25	0	genome.wustl.edu	37	12	112492200	112492202	+	In_Frame_Del	DEL	ATC	ATC	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	ATC	ATC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	112492200	112492202	ATC	-	DEL	NAA25	ENST00000261745	human	ensembl	74_37	-1	known	in_frame_del	c.1620_1618	p.D540in_frame_del	1.000:1.000:1.000	pfam_N-acetylTrfase_B_cplx_non-cat	pfam_N-acetylTrfase_B_cplx_non-cat,pfscan_TPR-contain_dom	-	no_errors	NAA25	HGNC	ENSG00000111300				93	0	0	32	18	36
RASAL1	0	genome.wustl.edu	37	12	113553853	113553853	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	113553853	113553853	C	-	DEL	RASAL1	ENST00000546530	human	ensembl	74_37	-1	known	frame_shift_del	c.735	p.N246fs	0.000	superfamily_C2_dom,smart_RasGAP	pfam_RasGAP,pfam_C2_dom,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_C2_dom,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASAL1	HGNC	ENSG00000111344				74	0	0	53	10	15.873
VPS37B	0	genome.wustl.edu	37	12	123351892	123351893	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	123351892	123351893	GG	-	DEL	VPS37B	ENST00000267202	human	ensembl	74_37	-1	known	frame_shift_del	c.629_628	p.P210fs	0.609:0.698	NULL	pfam_Mod_r	-	no_errors	VPS37B	HGNC	ENSG00000139722				19	0	0	17	10	37.037
SBNO1	0	genome.wustl.edu	37	12	123794282	123794283	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	123794282	123794283	-	T	INS	SBNO1	ENST00000420886	human	ensembl	74_37	-1	known	frame_shift_ins	c.3417_3416	p.N1139fs	1.000:1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697				112	1	0.884956	86	26	23.2143
GRIN2B	0	genome.wustl.edu	37	12	14019043	14019044	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	14019043	14019044	-	G	INS	GRIN2B	ENST00000609686	human	ensembl	74_37	-1	known	frame_shift_ins	c.100_99	p.S33fs	1.000:1.000	superfamily_Peripla_BP_I	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000273079				64	0	0	57	15	20.8333
FAM60A	0	genome.wustl.edu	37	12	31448178	31448178	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	31448178	31448178	T	-	DEL	FAM60A	ENST00000337682	human	ensembl	74_37	-1	known	frame_shift_del	c.218	p.N73fs	1.000	NULL	NULL	-	no_errors	FAM60A	HGNC	ENSG00000139146				47	0	0	15	31	67.3913
ALG10	0	genome.wustl.edu	37	12	34179308	34179308	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	34179308	34179308	T	-	DEL	ALG10	ENST00000266483	human	ensembl	74_37	+1	known	frame_shift_del	c.880	p.S296fs	1.000	pfam_Alg10,pirsf_Alg10	pfam_Alg10,pirsf_Alg10	-	no_errors	ALG10	HGNC	ENSG00000139133				153	0	0	113	42	27.0968
DYRK4	0	genome.wustl.edu	37	12	4719362	4719362	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	4719362	4719362	A	-	DEL	DYRK4	ENST00000010132	human	ensembl	74_37	+1	known	frame_shift_del	c.1057	p.R355fs	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK4	HGNC	ENSG00000010219				88	0	0	56	24	30
KMT2D	0	genome.wustl.edu	37	12	49447773	49447773	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	49447773	49447773	C	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.661	p.A221fs	1.000	superfamily_Znf_FYVE_PHD	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				73	0	0	38	9	19.1489
RACGAP1	0	genome.wustl.edu	37	12	50384071	50384072	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	50384071	50384072	-	A	INS	RACGAP1	ENST00000312377	human	ensembl	74_37	-1	known	frame_shift_ins	c.1879_1878	p.A626fs	1.000:1.000	NULL	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Rho_GTPase_activation_prot,superfamily_Regulat_G_prot_signal_superfam,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	RACGAP1	HGNC	ENSG00000161800				127	0	0	52	13	20
TENC1	0	genome.wustl.edu	37	12	53453399	53453399	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	53453399	53453399	G	-	DEL	TENC1	ENST00000314276	human	ensembl	74_37	+1	known	frame_shift_del	c.2004	p.K670fs	1.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TENC1	HGNC	ENSG00000111077				102	0	0	68	14	17.0732
AMHR2	0	genome.wustl.edu	37	12	53819645	53819645	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	53819645	53819645	G	-	DEL	AMHR2	ENST00000257863	human	ensembl	74_37	+1	known	frame_shift_del	c.794	p.G267fs	0.935	pirsf_Anti-muellerian_hrmn_rcpt_II,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Anti-muellerian_hrmn_rcpt_II,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AMHR2	HGNC	ENSG00000135409				89	0	0	55	15	21.4286
MAP3K12	0	genome.wustl.edu	37	12	53877706	53877708	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	53877706	53877708	CCT	-	DEL	MAP3K12	ENST00000267079	human	ensembl	74_37	-1	known	in_frame_del	c.1248_1246	p.R416in_frame_del	1.000:1.000:0.990	pirsf_MAP3K12_MAP3K13,superfamily_Kinase-like_dom	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K12	HGNC	ENSG00000139625				313	0	0	135	52	27.8075
OR6C75	0	genome.wustl.edu	37	12	55759486	55759486	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	55759486	55759486	T	-	DEL	OR6C75	ENST00000343399	human	ensembl	74_37	+1	known	frame_shift_del	c.592	p.L200fs	0.582	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C75	HGNC	ENSG00000187857				83	0	0	48	25	34.2466
STAT2	0	genome.wustl.edu	37	12	56744034	56744034	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	56744034	56744034	A	-	DEL	STAT2	ENST00000557252	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040	-	-	-	no_errors	STAT2	HGNC	ENSG00000170581				49	0	0	30	28	48.2759
MBD6	0	genome.wustl.edu	37	12	57921731	57921732	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	57921731	57921732	-	G	INS	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_ins	c.2337_2338	p.A782fs	1.000:1.000	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				82	0	0	67	17	20.2381
CD4	0	genome.wustl.edu	37	12	6924043	6924043	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	6924043	6924043	G	-	DEL	CD4	ENST00000011653	human	ensembl	74_37	+1	known	frame_shift_del	c.492	p.K167fs	0.000	pfam_Ig_C2-set,smart_Ig_sub,smart_Ig_sub2	pfam_CD4-extracel,pfam_Ig_C2-set,pfam_Tcell_CD4_Cterm,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,pfam_NK_rcpt_2B4_Ig_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Ag_CD4	-	no_errors	CD4	HGNC	ENSG00000010610				98	0	0	69	23	25
C1S	0	genome.wustl.edu	37	12	7173239	7173239	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	7173239	7173239	A	-	DEL	C1S	ENST00000328916	human	ensembl	74_37	+1	known	frame_shift_del	c.836	p.K281fs	0.022	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	C1S	HGNC	ENSG00000182326				107	0	0	62	25	28.7356
TMTC3	0	genome.wustl.edu	37	12	88588948	88588949	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	12	88588948	88588949	-	A	INS	TMTC3	ENST00000266712	human	ensembl	74_37	+1	known	frame_shift_ins	c.2267_2268	p.C759fs	1.000:0.976	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_2,pfam_TPR_1,pfam_DUF1736,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC3	HGNC	ENSG00000139324				68	0	0	59	19	24.359
UPF3A	0	genome.wustl.edu	37	13	115051799	115051800	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	115051799	115051800	AG	-	DEL	UPF3A	ENST00000375299	human	ensembl	74_37	+1	known	frame_shift_del	c.444_445	p.E149fs	0.980:1.000	pfam_Nonsense_mediated_decay_UPF3	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3A	HGNC	ENSG00000169062				133	0	0	67	28	29.4737
MPHOSPH8	0	genome.wustl.edu	37	13	20245322	20245322	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	20245322	20245322	T	-	DEL	MPHOSPH8	ENST00000496525	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MPHOSPH8	HGNC	ENSG00000196199				33	0	0	19	3	13.6364
SACS	0	genome.wustl.edu	37	13	23908934	23908934	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	23908934	23908934	A	-	DEL	SACS	ENST00000382292	human	ensembl	74_37	-1	known	frame_shift_del	c.9081	p.F3027fs	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				76	0	0	45	27	37.5
MEDAG	0	genome.wustl.edu	37	13	31480852	31480852	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	31480852	31480852	G	-	DEL	MEDAG	ENST00000380482	human	ensembl	74_37	+1	known	frame_shift_del	c.200	p.G69fs	0.590	NULL	NULL	-	no_errors	MEDAG	HGNC	ENSG00000102802				12	0	0	6	2	25
AKAP11	0	genome.wustl.edu	37	13	42874500	42874500	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	42874500	42874500	A	-	DEL	AKAP11	ENST00000025301	human	ensembl	74_37	+1	known	frame_shift_del	c.1618	p.N541fs	0.987	NULL	NULL	-	no_errors	AKAP11	HGNC	ENSG00000023516				39	0	0	21	15	41.6667
UTP14C	0	genome.wustl.edu	37	13	52604361	52604361	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	52604361	52604361	A	-	DEL	UTP14C	ENST00000521776	human	ensembl	74_37	+1	known	frame_shift_del	c.1421	p.A476fs	0.136	pfam_SSU_processome_Utp14	pfam_SSU_processome_Utp14	-	no_errors	UTP14C	HGNC	ENSG00000253797				226	0	0	139	53	27.6042
SLC15A1	0	genome.wustl.edu	37	13	99354751	99354751	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	13	99354751	99354751	T	-	DEL	SLC15A1	ENST00000376503	human	ensembl	74_37	-1	known	frame_shift_del	c.1449	p.E485fs	0.999	superfamily_MFS_dom_general_subst_transpt,tigrfam_Oligopep_transport	pfam_POT_fam,superfamily_MFS_dom_general_subst_transpt,tigrfam_Oligopep_transport	-	no_errors	SLC15A1	HGNC	ENSG00000088386				154	0	0	82	38	31.6667
EML1	0	genome.wustl.edu	37	14	100402660	100402660	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	100402660	100402660	A	-	DEL	EML1	ENST00000334192	human	ensembl	74_37	+1	known	frame_shift_del	c.2141	p.I715fs	1.000	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML1	HGNC	ENSG00000066629				42	0	0	22	7	24.1379
HSP90AA1	0	genome.wustl.edu	37	14	102551160	102551161	+	In_Frame_Ins	INS	-	-	TCT			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	102551160	102551161	-	TCT	INS	HSP90AA1	ENST00000334701	human	ensembl	74_37	-1	known	in_frame_ins	c.1205_1204	p.402in_frame_insK	1.000:1.000	pirsf_Hsp90_fam,pfam_Hsp90_fam	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90AA1	HGNC	ENSG00000080824				53	0	0	36	11	23.4043
INF2	0	genome.wustl.edu	37	14	105169757	105169758	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	105169757	105169758	GC	-	DEL	INF2	ENST00000392634	human	ensembl	74_37	+1	known	frame_shift_del	c.633_634	p.R214fs	0.654:0.649	pfam_FH3_dom,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485				235	0	0	144	22	13.253
MTA1	0	genome.wustl.edu	37	14	105936238	105936239	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	105936238	105936239	-	G	INS	MTA1	ENST00000331320	human	ensembl	74_37	+1	known	frame_shift_ins	c.1906_1907	p.S639fs	0.998:0.999	NULL	pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	MTA1	HGNC	ENSG00000182979				24	0	0	16	6	27.2727
ACIN1	0	genome.wustl.edu	37	14	23549379	23549379	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	23549379	23549379	C	-	DEL	ACIN1	ENST00000262710	human	ensembl	74_37	-1	known	frame_shift_del	c.1339	p.A447fs	0.998	NULL	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	ACIN1	HGNC	ENSG00000100813				87	0	0	59	14	19.1781
ARHGAP5	0	genome.wustl.edu	37	14	32562696	32562696	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	32562696	32562696	A	-	DEL	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	frame_shift_del	c.2821	p.N943fs	1.000	NULL	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				81	0	0	38	25	39.6825
NKX2-1-AS1	0	genome.wustl.edu	37	14	36988613	36988613	+	RNA	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	36988613	36988613	G	-	DEL	NKX2-1-AS1	ENST00000521292	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NKX2-1-AS1	HGNC	ENSG00000253563				24	0	0	13	7	35
GCH1	0	genome.wustl.edu	37	14	55310426	55310426	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	55310426	55310426	A	-	DEL	GCH1	ENST00000254299	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GCH1	HGNC	ENSG00000131979				36	0	0	31	10	24.3902
ENSG00000258428	0	genome.wustl.edu	37	14	57099977	57099977	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	57099977	57099977	T	-	DEL	ENSG00000258428	ENST00000553800	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-1085N6.2	Clone_based_vega_gene	ENSG00000258428				12	0	0	8	7	46.6667
C14orf37	0	genome.wustl.edu	37	14	58598353	58598353	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	58598353	58598353	C	-	DEL	C14orf37	ENST00000267485	human	ensembl	74_37	-1	known	frame_shift_del	c.1708	p.E570fs	0.000	NULL	NULL	-	no_errors	C14orf37	HGNC	ENSG00000139971				107	0	0	57	23	28.75
SIPA1L1	0	genome.wustl.edu	37	14	72054754	72054755	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	72054754	72054755	-	C	INS	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	frame_shift_ins	c.165_166	p.R57fs	0.981:1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555				144	1	0.689655	101	29	22.3077
DPF3	0	genome.wustl.edu	37	14	73190445	73190446	+	RNA	DEL	AA	AA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	73190445	73190446	AA	-	DEL	DPF3	ENST00000556238	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.887:0.927	-	-	-	no_errors	DPF3	HGNC	ENSG00000205683				97	0	0	54	19	26.0274
ELMSAN1	0	genome.wustl.edu	37	14	74205773	74205773	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	74205773	74205773	G	-	DEL	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	frame_shift_del	c.939	p.N314fs	0.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030				23	0	0	18	12	40
DLST	0	genome.wustl.edu	37	14	75359617	75359617	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	75359617	75359617	C	-	DEL	DLST	ENST00000334220	human	ensembl	74_37	+1	known	frame_shift_del	c.523	p.P176fs	1.000	tigrfam_SucB	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,superfamily_Single_hybrid_motif,pfscan_Biotin_lipoyl,tigrfam_SucB	-	no_errors	DLST	HGNC	ENSG00000119689				63	0	0	35	26	42.623
SAMD15	0	genome.wustl.edu	37	14	77844868	77844869	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	77844868	77844869	-	A	INS	SAMD15	ENST00000216471	human	ensembl	74_37	+1	known	frame_shift_ins	c.1107_1108	p.N371fs	0.000:0.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD15	HGNC	ENSG00000100583				109	0	0	68	22	24.4444
ATG2B	0	genome.wustl.edu	37	14	96770878	96770878	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	96770878	96770878	C	-	DEL	ATG2B	ENST00000359933	human	ensembl	74_37	-1	known	frame_shift_del	c.4796	p.G1599fs	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2B	HGNC	ENSG00000066739				166	0	0	58	32	35.5556
ATG2B	0	genome.wustl.edu	37	14	96788613	96788614	+	RNA	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	14	96788613	96788614	-	A	INS	ATG2B	ENST00000488421	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ATG2B	HGNC	ENSG00000066739				73	0	0	37	5	11.9048
NIPA2	0	genome.wustl.edu	37	15	23021239	23021239	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	23021239	23021239	T	-	DEL	NIPA2	ENST00000337451	human	ensembl	74_37	-1	known	frame_shift_del	c.98	p.K33fs	1.000	pfam_Mg_trans_NIPA	pfam_Mg_trans_NIPA,pfam_DMT	-	no_errors	NIPA2	HGNC	ENSG00000140157				130	0	0	73	30	29.1262
MKRN3	0	genome.wustl.edu	37	15	23811404	23811405	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	23811404	23811405	-	C	INS	MKRN3	ENST00000314520	human	ensembl	74_37	+1	known	frame_shift_ins	c.475_476	p.A162fs	0.960:0.962	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455				65	0	0	47	17	26.5625
MTMR10	0	genome.wustl.edu	37	15	31234037	31234038	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	31234037	31234038	CA	-	DEL	MTMR10	ENST00000435680	human	ensembl	74_37	-1	known	frame_shift_del	c.1970_1969	p.W657fs	1.000:1.000	pfam_Myotubularin_assoc	pfam_Myotubularin_assoc,pfam_Myotubularin-like_Pase_dom	-	no_errors	MTMR10	HGNC	ENSG00000166912				72	0	0	33	21	38.8889
MGA	0	genome.wustl.edu	37	15	42042041	42042041	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	42042041	42042041	A	-	DEL	MGA	ENST00000219905	human	ensembl	74_37	+1	known	frame_shift_del	c.6236	p.V2081fs	1.000	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				69	0	0	31	13	29.5455
ZNF106	0	genome.wustl.edu	37	15	42742957	42742957	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	42742957	42742957	A	-	DEL	ZNF106	ENST00000263805	human	ensembl	74_37	-1	known	frame_shift_del	c.1444	p.S482fs	0.139	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_Znf_C2H2-like,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ZNF106	HGNC	ENSG00000103994				238	0	0	145	55	27.5
ATP8B4	0	genome.wustl.edu	37	15	50264853	50264853	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	50264853	50264853	A	-	DEL	ATP8B4	ENST00000284509	human	ensembl	74_37	-1	known	frame_shift_del	c.1169	p.F390fs	1.000	superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B4	HGNC	ENSG00000104043				55	0	0	33	14	29.7872
TIPIN	0	genome.wustl.edu	37	15	66672095	66672095	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	66672095	66672095	T	-	DEL	TIPIN	ENST00000561773	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	TIPIN	HGNC	ENSG00000075131				62	0	0	40	9	18.3673
ENSG00000261460	0	genome.wustl.edu	37	15	72638557	72638557	+	RNA	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	72638557	72638557	C	-	DEL	ENSG00000261460	ENST00000570175	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-106M3.3	Clone_based_vega_gene	ENSG00000261460				36	0	0	14	8	36.3636
STRA6	0	genome.wustl.edu	37	15	74494643	74494643	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	74494643	74494643	A	-	DEL	STRA6	ENST00000573456	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	STRA6	HGNC	ENSG00000137868				24	0	0	16	7	30.4348
ALPK3	0	genome.wustl.edu	37	15	85400266	85400267	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	85400266	85400267	-	A	INS	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	frame_shift_ins	c.2903_2904	p.P971fs	0.899:0.859	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383				186	0	0	105	52	33.121
AGBL1	0	genome.wustl.edu	37	15	86807693	86807693	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	86807693	86807693	A	-	DEL	AGBL1	ENST00000441037	human	ensembl	74_37	+1	known	frame_shift_del	c.1153	p.N387fs	0.000	superfamily_ARM-type_fold	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGBL1	HGNC	ENSG00000166748				65	0	0	38	22	36.6667
POLG	0	genome.wustl.edu	37	15	89876827	89876828	+	In_Frame_Ins	INS	-	-	TGC			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	15	89876827	89876828	-	TGC	INS	POLG	ENST00000268124	human	ensembl	74_37	-1	known	in_frame_ins	c.159_158	p.56in_frame_insQ	0.004:0.005	pirsf_DNA-dir_DNA_pol_A_mt_sub	pirsf_DNA-dir_DNA_pol_A_mt_sub,pfam_DNA-dir_DNA_pol_A_palm_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_A_palm_dom,prints_DNA-dir_DNA_pol_A_mt	-	no_errors	POLG	HGNC	ENSG00000140521				32	0	0	22	7	24.1379
FOPNL	0	genome.wustl.edu	37	16	15978038	15978038	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	15978038	15978038	T	-	DEL	FOPNL	ENST00000255759	human	ensembl	74_37	-1	known	frame_shift_del	c.53	p.K18fs	0.435	NULL	pfam_FOP_dimerisation-dom_N,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	FOPNL	HGNC	ENSG00000133393				71	0	0	27	8	22.8571
TMC5	0	genome.wustl.edu	37	16	19498596	19498596	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	19498596	19498596	T	-	DEL	TMC5	ENST00000396229	human	ensembl	74_37	+1	known	frame_shift_del	c.2521	p.F842fs	1.000	NULL	pfam_TMC	-	no_errors	TMC5	HGNC	ENSG00000103534				87	0	0	48	20	29.4118
PLK1	0	genome.wustl.edu	37	16	23701273	23701275	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	23701273	23701275	GGA	-	DEL	PLK1	ENST00000300093	human	ensembl	74_37	+1	known	in_frame_del	c.1701_1703	p.E569in_frame_del	0.981:1.000:1.000	pfam_POLO_box_duplicated_dom,pfscan_POLO_box_duplicated_dom	pfam_Prot_kinase_dom,pfam_POLO_box_duplicated_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK1	HGNC	ENSG00000166851				157	0	0	87	34	28.0992
ATXN2L	0	genome.wustl.edu	37	16	28848083	28848083	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	28848083	28848083	C	-	DEL	ATXN2L	ENST00000325215	human	ensembl	74_37	+1	known	frame_shift_del	c.3151	p.E1054fs	1.000	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488				107	0	0	61	16	20.7792
ZNF747	0	genome.wustl.edu	37	16	30544295	30544295	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	30544295	30544295	G	-	DEL	ZNF747	ENST00000535210	human	ensembl	74_37	-1	known	frame_shift_del	c.518	p.P173fs	0.155	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955				23	0	0	13	11	45.8333
FBRS	0	genome.wustl.edu	37	16	30676232	30676232	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	30676232	30676232	C	-	DEL	FBRS	ENST00000356166	human	ensembl	74_37	+1	known	frame_shift_del	c.1554	p.H520fs	1.000	NULL	prints_AUTS2	-	no_errors	FBRS	HGNC	ENSG00000156860				19	0	0	14	4	22.2222
SALL1	0	genome.wustl.edu	37	16	51175644	51175646	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	51175644	51175646	GCC	-	DEL	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	in_frame_del	c.489_487	p.G163in_frame_del	0.994:0.989:0.878	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449				33	0	0	45	17	27.4194
IRX6	0	genome.wustl.edu	37	16	55362673	55362674	+	In_Frame_Ins	INS	-	-	GAG			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	55362673	55362674	-	GAG	INS	IRX6	ENST00000290552	human	ensembl	74_37	+1	known	in_frame_ins	c.783_784	p.265in_frame_insE	0.908:0.987	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX6	HGNC	ENSG00000159387				103	0	0	68	17	20
FHOD1	0	genome.wustl.edu	37	16	67267852	67267852	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	67267852	67267852	G	-	DEL	FHOD1	ENST00000258201	human	ensembl	74_37	-1	known	frame_shift_del	c.1754	p.P585fs	1.000	NULL	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD1	HGNC	ENSG00000135723				18	0	0	15	9	37.5
MTSS1L	0	genome.wustl.edu	37	16	70698147	70698147	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	70698147	70698147	G	-	DEL	MTSS1L	ENST00000338779	human	ensembl	74_37	-1	known	frame_shift_del	c.1677	p.G560fs	0.001	NULL	pfam_IRSp53/MIM_homology_IMD	-	no_errors	MTSS1L	HGNC	ENSG00000132613				29	0	0	20	10	33.3333
CFDP1	0	genome.wustl.edu	37	16	75327732	75327732	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	75327732	75327732	A	-	DEL	CFDP1	ENST00000570103	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.940	-	-	-	no_errors	CFDP1	HGNC	ENSG00000153774				9	0	0	3	6	66.6667
TAF1C	0	genome.wustl.edu	37	16	84213037	84213037	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	84213037	84213037	G	-	DEL	TAF1C	ENST00000378541	human	ensembl	74_37	-1	known	frame_shift_del	c.2120	p.P707fs	0.942	NULL	superfamily_WD40_repeat_dom	-	no_errors	TAF1C	HGNC	ENSG00000103168				78	0	0	40	6	13.0435
ZCCHC14	0	genome.wustl.edu	37	16	87445211	87445211	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	87445211	87445211	T	-	DEL	ZCCHC14	ENST00000268616	human	ensembl	74_37	-1	known	frame_shift_del	c.2705	p.K902fs	1.000	superfamily_Znf_CCHC	pfam_SAM_type1,pfam_Znf_CCHC,superfamily_Phox,superfamily_SAM/pointed,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC14	HGNC	ENSG00000140948				132	0	0	91	35	27.7778
ZC3H18	0	genome.wustl.edu	37	16	88691141	88691141	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	16	88691141	88691141	C	-	DEL	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	frame_shift_del	c.2030	p.R680fs	0.568	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545				40	0	0	25	6	19.3548
C17orf76-AS1	0	genome.wustl.edu	37	17	16344524	16344525	+	RNA	DEL	AA	AA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	16344524	16344525	AA	-	DEL	C17orf76-AS1	ENST00000460249	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	C17orf76-AS1	HGNC	ENSG00000175061				53	0	0	27	20	42.5532
SMG6	0	genome.wustl.edu	37	17	1964760	1964760	+	RNA	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	1964760	1964760	G	-	DEL	SMG6	ENST00000570756	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.027	-	-	-	no_errors	SMG6	HGNC	ENSG00000070366				13	0	0	3	4	57.1429
SPECC1	0	genome.wustl.edu	37	17	20108263	20108263	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	20108263	20108263	A	-	DEL	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.N303fs	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				135	0	0	93	35	27.3438
MYO18A	0	genome.wustl.edu	37	17	27493332	27493332	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	27493332	27493332	G	-	DEL	MYO18A	ENST00000354329	human	ensembl	74_37	-1	known	frame_shift_del	c.627	p.V210fs	0.000	superfamily_PDZ	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_PDZ,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_Regulat_G_prot_signal_superfam,smart_PDZ,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_PDZ,pfscan_RecA_monomer-monomer_interface,prints_Myosin_head_motor_dom	-	no_errors	MYO18A	HGNC	ENSG00000196535				112	0	0	53	38	41.7582
KRT23	0	genome.wustl.edu	37	17	39092736	39092737	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	39092736	39092737	-	C	INS	KRT23	ENST00000209718	human	ensembl	74_37	-1	known	frame_shift_ins	c.120_119	p.A41fs	0.000:0.968	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT23	HGNC	ENSG00000108244				75	0	0	61	23	27.381
KRTAP9-8	0	genome.wustl.edu	37	17	39394461	39394461	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	39394461	39394461	A	-	DEL	KRTAP9-8	ENST00000254072	human	ensembl	74_37	+1	known	frame_shift_del	c.158	p.N54fs	0.000	NULL	NULL	-	no_errors	KRTAP9-8	HGNC	ENSG00000187272				126	0	0	63	24	27.5862
FKBP10	0	genome.wustl.edu	37	17	39969301	39969301	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	39969301	39969301	C	-	DEL	FKBP10	ENST00000321562	human	ensembl	74_37	+1	known	frame_shift_del	c.15	p.S8fs	0.000	NULL	pfam_PPIase_FKBP_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP10	HGNC	ENSG00000141756				52	0	0	19	7	26.9231
WNK4	0	genome.wustl.edu	37	17	40939870	40939870	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	40939870	40939870	G	-	DEL	WNK4	ENST00000246914	human	ensembl	74_37	+1	known	frame_shift_del	c.1816	p.V608fs	0.004	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK4	HGNC	ENSG00000126562				102	0	0	56	27	32.5301
RNF43	0	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	56435161	56435161	C	-	DEL	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	frame_shift_del	c.1976	p.G659fs	0.900	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375				186	0	0	65	88	57.5163
TP53	0	genome.wustl.edu	37	17	7578475	7578475	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	7578475	7578475	G	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	frame_shift_del	c.455	p.P152fs	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				107	0	0	55	20	26.6667
TP53	0	genome.wustl.edu	37	17	7579471	7579471	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	7579471	7579471	G	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	frame_shift_del	c.216	p.V73fs	0.001	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				201	1	0.49505	125	34	21.3836
NOTUM	0	genome.wustl.edu	37	17	79914942	79914942	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	79914942	79914942	C	-	DEL	NOTUM	ENST00000409678	human	ensembl	74_37	-1	known	frame_shift_del	c.704	p.G235fs	1.000	pfam_NOTUM	pfam_NOTUM	-	no_errors	NOTUM	HGNC	ENSG00000185269				49	0	0	33	14	29.7872
TBCD	0	genome.wustl.edu	37	17	80721910	80721911	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	17	80721910	80721911	-	T	INS	TBCD	ENST00000355528	human	ensembl	74_37	+1	known	frame_shift_ins	c.305_306	p.K104fs	1.000:1.000	superfamily_ARM-type_fold	pfam_Tubulin_specific_chaperoneD_C,superfamily_ARM-type_fold	-	no_errors	TBCD	HGNC	ENSG00000141556				43	0	0	11	13	54.1667
ANKRD20A5P	0	genome.wustl.edu	37	18	14225639	14225639	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	14225639	14225639	A	-	DEL	ANKRD20A5P	ENST00000577614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.184	-	-	-	no_errors	ANKRD20A5P	HGNC	ENSG00000186481				21	0	0	12	7	36.8421
ROCK1	0	genome.wustl.edu	37	18	18629104	18629105	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	18629104	18629105	-	A	INS	ROCK1	ENST00000399799	human	ensembl	74_37	-1	known	frame_shift_ins	c.363_362	p.W122fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Rho-bd_dom,pfam_HR1_rho-bd,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	ROCK1	HGNC	ENSG00000067900				117	0	0	51	31	37.8049
CCDC178	0	genome.wustl.edu	37	18	30913143	30913143	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	30913143	30913143	T	-	DEL	CCDC178	ENST00000406524	human	ensembl	74_37	-1	known	frame_shift_del	c.874	p.M292fs	0.000	NULL	NULL	-	no_errors	CCDC178	HGNC	ENSG00000166960				50	0	0	26	13	33.3333
LMAN1	0	genome.wustl.edu	37	18	57021814	57021815	+	Splice_Site	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	57021814	57021815	-	A	INS	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	splice_site_ins	c.478-3_478-2	e4-2	1.000:0.648	-	-	-	no_errors	LMAN1	HGNC	ENSG00000074695				37	0	0	22	8	26.6667
TMX3	0	genome.wustl.edu	37	18	66367694	66367695	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	66367694	66367695	TA	-	DEL	TMX3	ENST00000299608	human	ensembl	74_37	-1	known	frame_shift_del	c.340_339	p.Y113fs	0.998:0.996	pfam_Thioredoxin_domain,pfam_Calsequestrin,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Thioredoxin	-	no_errors	TMX3	HGNC	ENSG00000166479				160	0	0	66	14	17.5
CBLN2	0	genome.wustl.edu	37	18	70209335	70209335	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	18	70209335	70209335	C	-	DEL	CBLN2	ENST00000269503	human	ensembl	74_37	-1	known	frame_shift_del	c.61	p.A21fs	1.000	NULL	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN2	HGNC	ENSG00000141668				18	0	0	10	4	28.5714
ICAM4	0	genome.wustl.edu	37	19	10397719	10397719	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	10397719	10397719	T	-	DEL	ICAM4	ENST00000340992	human	ensembl	74_37	+1	known	frame_shift_del	c.31	p.L13fs	0.004	NULL	pfam_ICAM_N	-	no_errors	ICAM4	HGNC	ENSG00000105371				17	0	0	12	3	20
KRI1	0	genome.wustl.edu	37	19	10676487	10676488	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	10676487	10676488	-	C	INS	KRI1	ENST00000361821	human	ensembl	74_37	-1	putative	frame_shift_ins	c.80_79	p.A27fs	0.000:0.000	NULL	pfam_KRR1-interact_protein_1	-	no_errors	KRI1	HGNC	ENSG00000129347				18	0	0	7	3	30
MAN2B1	0	genome.wustl.edu	37	19	12759984	12759984	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	12759984	12759984	C	-	DEL	MAN2B1	ENST00000456935	human	ensembl	74_37	-1	known	frame_shift_del	c.2402	p.G801fs	1.000	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B1	HGNC	ENSG00000104774				47	0	0	50	12	19.3548
FBXW9	0	genome.wustl.edu	37	19	12800974	12800974	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	12800974	12800974	C	-	DEL	FBXW9	ENST00000380339	human	ensembl	74_37	-1	known	frame_shift_del	c.924	p.P309fs	0.002	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW9	HGNC	ENSG00000132004				35	0	0	16	8	33.3333
DAZAP1	0	genome.wustl.edu	37	19	1430254	1430254	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	1430254	1430254	C	-	DEL	DAZAP1	ENST00000233078	human	ensembl	74_37	+1	known	frame_shift_del	c.764	p.P257fs	0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DAZAP1	HGNC	ENSG00000071626				39	0	0	23	8	25.8065
CPAMD8	0	genome.wustl.edu	37	19	17081703	17081703	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	17081703	17081703	G	-	DEL	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	frame_shift_del	c.2352	p.R785fs	0.962	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				36	0	0	40	14	25.9259
ZNF681	0	genome.wustl.edu	37	19	23927980	23927980	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	23927980	23927980	T	-	DEL	ZNF681	ENST00000402377	human	ensembl	74_37	-1	known	frame_shift_del	c.372	p.G125fs	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC	ENSG00000196172				55	0	0	25	10	28.5714
KCTD15	0	genome.wustl.edu	37	19	34292140	34292140	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	34292140	34292140	C	-	DEL	KCTD15	ENST00000430256	human	ensembl	74_37	+1	known	frame_shift_del	c.135	p.L47fs	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD15	HGNC	ENSG00000153885				92	0	0	53	30	36.1446
MFSD12	0	genome.wustl.edu	37	19	3542859	3542859	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	3542859	3542859	G	-	DEL	MFSD12	ENST00000398558	human	ensembl	74_37	-1	known	frame_shift_del	c.1537	p.L513fs	0.004	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD12	HGNC	ENSG00000161091				88	0	0	51	16	23.8806
KMT2B	0	genome.wustl.edu	37	19	36214714	36214714	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	36214714	36214714	G	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.3140	p.A1049fs	1.000	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				29	0	0	9	8	47.0588
NCCRP1	0	genome.wustl.edu	37	19	39691081	39691081	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	39691081	39691081	C	-	DEL	NCCRP1	ENST00000339852	human	ensembl	74_37	+1	known	frame_shift_del	c.644	p.R217fs	0.977	pfam_F-box-assoc_dom,superfamily_Galactose-bd-like,pfscan_F-box-assoc_dom	pfam_F-box-assoc_dom,superfamily_Galactose-bd-like,pfscan_F-box-assoc_dom	-	no_errors	NCCRP1	HGNC	ENSG00000188505				195	0	0	118	47	28.4848
DYRK1B	0	genome.wustl.edu	37	19	40316612	40316612	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	40316612	40316612	G	-	DEL	DYRK1B	ENST00000323039	human	ensembl	74_37	-1	known	frame_shift_del	c.1633	p.Q545fs	0.436	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1B	HGNC	ENSG00000105204				96	0	0	56	16	22.2222
FBL	0	genome.wustl.edu	37	19	40325193	40325193	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	40325193	40325193	G	-	DEL	FBL	ENST00000221801	human	ensembl	74_37	-1	known	frame_shift_del	c.951	p.K318fs	1.000	NULL	pfam_Fibrillarin,pirsf_Fibrillarin,prints_Fibrillarin	-	no_errors	FBL	HGNC	ENSG00000105202				185	0	0	108	43	28.4768
SHKBP1	0	genome.wustl.edu	37	19	41082994	41082995	+	RNA	DEL	CC	CC	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	41082994	41082995	CC	-	DEL	SHKBP1	ENST00000600552	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	SHKBP1	HGNC	ENSG00000160410				16	0	0	7	9	56.25
HNRNPUL1	0	genome.wustl.edu	37	19	41808818	41808818	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	41808818	41808818	G	-	DEL	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	frame_shift_del	c.1936	p.G647fs	0.979	NULL	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323				88	0	0	53	22	29.3333
CIC	0	genome.wustl.edu	37	19	42797376	42797376	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	42797376	42797376	C	-	DEL	CIC	ENST00000575354	human	ensembl	74_37	+1	known	frame_shift_del	c.3738	p.P1248fs	0.989	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				12	0	0	4	4	50
MEGF8	0	genome.wustl.edu	37	19	42857626	42857626	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	42857626	42857626	G	-	DEL	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	frame_shift_del	c.3560	p.E1189fs	0.985	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429				25	0	0	15	4	21.0526
UBXN6	0	genome.wustl.edu	37	19	4446878	4446879	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	4446878	4446879	-	A	INS	UBXN6	ENST00000301281	human	ensembl	74_37	-1	known	frame_shift_ins	c.655_654	p.E218fs	0.985:0.975	pfam_PUB_domain,smart_PUG-dom	pfam_PUB_domain,pfam_UBX,smart_PUG-dom,smart_UBX,pfscan_UBX	-	no_errors	UBXN6	HGNC	ENSG00000167671				67	0	0	27	16	37.2093
ZNF227	0	genome.wustl.edu	37	19	44732508	44732508	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	44732508	44732508	T	-	DEL	ZNF227	ENST00000589237	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF227	HGNC	ENSG00000131115				17	0	0	12	9	42.8571
BAX	0	genome.wustl.edu	37	19	49458970	49458971	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	49458970	49458971	-	G	INS	BAX	ENST00000293288	human	ensembl	74_37	+1	known	frame_shift_ins	c.113_114	p.E41fs	0.585:0.588	NULL	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BAX	HGNC	ENSG00000087088				110	0	0	55	16	22.5352
CGB7	0	genome.wustl.edu	37	19	49558253	49558254	+	In_Frame_Ins	INS	-	-	CAG			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	49558253	49558254	-	CAG	INS	CGB7	ENST00000377280	human	ensembl	74_37	-1	known	in_frame_ins	c.28_27	p.13in_frame_insL	0.965:0.996	NULL	pfam_Cys_knot,smart_Gonadotropin_bsu	-	no_errors	CGB7	HGNC	ENSG00000196337				159	0	0	94	23	19.6581
TRPM4	0	genome.wustl.edu	37	19	49671926	49671926	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	49671926	49671926	G	-	DEL	TRPM4	ENST00000252826	human	ensembl	74_37	+1	known	frame_shift_del	c.729	p.G245fs	0.102	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM4	HGNC	ENSG00000130529				19	0	0	17	8	32
TEAD2	0	genome.wustl.edu	37	19	49850473	49850473	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	49850473	49850473	G	-	DEL	TEAD2	ENST00000311227	human	ensembl	74_37	-1	known	frame_shift_del	c.883	p.H295fs	0.961	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD2	HGNC	ENSG00000074219				335	1	0.297619	85	111	56.6327
PIH1D1	0	genome.wustl.edu	37	19	49949891	49949891	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	49949891	49949891	G	-	DEL	PIH1D1	ENST00000262265	human	ensembl	74_37	-1	known	frame_shift_del	c.748	p.Q250fs	1.000	pfam_PIH	pfam_PIH	-	no_errors	PIH1D1	HGNC	ENSG00000104872				181	0	0	80	42	34.4262
SAFB2	0	genome.wustl.edu	37	19	5590298	5590298	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	5590298	5590298	G	-	DEL	SAFB2	ENST00000252542	human	ensembl	74_37	-1	known	frame_shift_del	c.2516	p.P839fs	0.257	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254				13	0	0	5	4	44.4444
TRIP10	0	genome.wustl.edu	37	19	6750379	6750380	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	19	6750379	6750380	-	C	INS	TRIP10	ENST00000313244	human	ensembl	74_37	+1	known	frame_shift_ins	c.1472_1473	p.A494fs	0.994:0.994	NULL	pfam_FCH_dom,pfam_SH3_domain,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	TRIP10	HGNC	ENSG00000125733				89	0	0	44	26	37.1429
SLC9A4	0	genome.wustl.edu	37	2	103125345	103125345	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	103125345	103125345	A	-	DEL	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	frame_shift_del	c.1441	p.T483fs	1.000	tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251				94	0	0	53	14	20.8955
GCC2	0	genome.wustl.edu	37	2	109087884	109087884	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	109087884	109087884	A	-	DEL	GCC2	ENST00000309863	human	ensembl	74_37	+1	known	frame_shift_del	c.2099	p.K702fs	1.000	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,smart_GRIP,pfscan_GRIP	-	no_errors	GCC2	HGNC	ENSG00000135968				244	0	0	117	52	30.7692
TUBA3E	0	genome.wustl.edu	37	2	130949500	130949501	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	130949500	130949501	AG	-	DEL	TUBA3E	ENST00000312988	human	ensembl	74_37	-1	known	frame_shift_del	c.1257_1256	p.S419fs	0.042:0.987	superfamily_Tub_FtsZ_C	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin	-	no_errors	TUBA3E	HGNC	ENSG00000152086				297	0	0	146	71	32.7189
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989				149	0	0	35	58	62.3656
RIF1	0	genome.wustl.edu	37	2	152318968	152318970	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	152318968	152318970	GAT	-	DEL	RIF1	ENST00000243326	human	ensembl	74_37	+1	known	in_frame_del	c.3351_3353	p.M1119in_frame_del	0.010:0.000:0.000	NULL	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_errors	RIF1	HGNC	ENSG00000080345				110	0	0	40	17	29.8246
PKP4	0	genome.wustl.edu	37	2	159481627	159481628	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	159481627	159481628	-	C	INS	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	frame_shift_ins	c.841_842	p.T283fs	1.000:1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283				52	0	0	29	9	23.6842
TANK	0	genome.wustl.edu	37	2	162091980	162091980	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	162091980	162091980	G	-	DEL	TANK	ENST00000259075	human	ensembl	74_37	+1	known	frame_shift_del	c.1229	p.D412fs	1.000	NULL	NULL	-	no_errors	TANK	HGNC	ENSG00000136560				142	0	0	83	30	26.5487
FIGN	0	genome.wustl.edu	37	2	164467543	164467543	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	164467543	164467543	C	-	DEL	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	frame_shift_del	c.799	p.A267fs	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263				100	0	0	39	13	25
SCN9A	0	genome.wustl.edu	37	2	167141203	167141203	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	167141203	167141203	A	-	DEL	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	frame_shift_del	c.1737	p.F579fs	0.819	pfam_DUF3451	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432				93	0	0	54	26	32.5
DHRS9	0	genome.wustl.edu	37	2	169948389	169948389	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	169948389	169948389	A	-	DEL	DHRS9	ENST00000432060	human	ensembl	74_37	+1	known	frame_shift_del	c.842	p.K283fs	0.158	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	DHRS9	HGNC	ENSG00000073737				62	0	0	34	18	34.6154
FASTKD1	0	genome.wustl.edu	37	2	170428529	170428530	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	170428529	170428530	-	T	INS	FASTKD1	ENST00000453153	human	ensembl	74_37	-1	known	frame_shift_ins	c.11_10	p.T4fs	0.000:0.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD1	HGNC	ENSG00000138399				52	0	0	27	10	27.027
MYO3B	0	genome.wustl.edu	37	2	171240258	171240259	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	171240258	171240259	-	C	INS	MYO3B	ENST00000334231	human	ensembl	74_37	+1	known	frame_shift_ins	c.1251_1252	p.H419fs	1.000:1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3B	HGNC	ENSG00000071909				99	0	0	46	21	31.3433
RBM45	0	genome.wustl.edu	37	2	178988920	178988920	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	178988920	178988920	A	-	DEL	RBM45	ENST00000286070	human	ensembl	74_37	+1	known	frame_shift_del	c.1135	p.A382fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM45	HGNC	ENSG00000155636				92	0	0	63	18	22.2222
DNAJC10	0	genome.wustl.edu	37	2	183606066	183606066	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	183606066	183606066	A	-	DEL	DNAJC10	ENST00000264065	human	ensembl	74_37	+1	known	frame_shift_del	c.1174	p.N393fs	1.000	superfamily_Thioredoxin-like_fold,pirsf_DnaJ_homolog_subfam-C	pfam_Thioredoxin_domain,pfam_DnaJ_domain,superfamily_Thioredoxin-like_fold,superfamily_DnaJ_domain,smart_DnaJ_domain,pirsf_DnaJ_homolog_subfam-C,pfscan_DnaJ_domain,prints_DnaJ_domain,prints_Thioredoxin	-	no_errors	DNAJC10	HGNC	ENSG00000077232				28	0	0	9	7	43.75
FSIP2	0	genome.wustl.edu	37	2	186678350	186678350	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	186678350	186678350	A	-	DEL	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	frame_shift_del	c.20173	p.N6726fs	0.247	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738				35	0	0	16	5	23.8095
SGOL2	0	genome.wustl.edu	37	2	201436289	201436289	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	201436289	201436289	A	-	DEL	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	frame_shift_del	c.1220	p.K409fs	0.134	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535				70	0	0	44	14	24.1379
CRYGA	0	genome.wustl.edu	37	2	209025577	209025577	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	209025577	209025577	C	-	DEL	CRYGA	ENST00000304502	human	ensembl	74_37	-1	known	frame_shift_del	c.476	p.G159fs	0.651	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGA	HGNC	ENSG00000168582				192	1	0.518135	95	33	25.7812
SLC4A3	0	genome.wustl.edu	37	2	220492742	220492742	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	220492742	220492742	G	-	DEL	SLC4A3	ENST00000273063	human	ensembl	74_37	+1	known	frame_shift_del	c.28	p.G11fs	1.000	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923				17	0	0	5	4	44.4444
IRS1	0	genome.wustl.edu	37	2	227662352	227662352	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	227662352	227662352	G	-	DEL	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	frame_shift_del	c.1103	p.P368fs	0.978	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047				123	0	0	57	28	32.9412
EFHD1	0	genome.wustl.edu	37	2	233527580	233527580	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	233527580	233527580	C	-	DEL	EFHD1	ENST00000264059	human	ensembl	74_37	+1	known	frame_shift_del	c.371	p.Q126fs	1.000	pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFHD1	HGNC	ENSG00000115468				68	0	0	48	13	21.3115
SRBD1	0	genome.wustl.edu	37	2	45826750	45826751	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	45826750	45826751	-	C	INS	SRBD1	ENST00000263736	human	ensembl	74_37	-1	known	frame_shift_ins	c.486_485	p.G163fs	0.017:0.015	NULL	pfam_Tex-like_N,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_NA-bd_OB-fold,superfamily_RuvA_2-like,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SRBD1	HGNC	ENSG00000068784				278	0	0	169	59	25.8772
MSH6	0	genome.wustl.edu	37	2	48030639	48030640	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	48030639	48030640	-	C	INS	MSH6	ENST00000234420	human	ensembl	74_37	+1	known	frame_shift_ins	c.3253_3254	p.F1088fs	0.001:0.003	pfam_DNA_mismatch_repair_MutS_C,superfamily_P-loop_NTPase,smart_DNA_mismatch_repair_MutS_core,pirsf_DNA_mismatch_repair_Msh6	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_core,pfam_PWWP_dom,pfam_DNA_mismatch_repair_MutS_clamp,pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_PWWP_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_Msh6,pfscan_PWWP_dom	-	no_errors	MSH6	HGNC	ENSG00000116062				68	0	0	31	16	34.0426
PSME4	0	genome.wustl.edu	37	2	54093345	54093345	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	54093345	54093345	T	-	DEL	PSME4	ENST00000404125	human	ensembl	74_37	-1	known	frame_shift_del	c.5413	p.T1805fs	1.000	pfam_DUF3437,superfamily_ARM-type_fold	pfam_DUF3437,superfamily_ARM-type_fold	-	no_errors	PSME4	HGNC	ENSG00000068878				164	0	0	107	11	9.32203
SMEK2	0	genome.wustl.edu	37	2	55808823	55808825	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	55808823	55808825	AAG	-	DEL	SMEK2	ENST00000272313	human	ensembl	74_37	-1	known	in_frame_del	c.1245_1243	p.L415in_frame_del	0.988:1.000:1.000	superfamily_ARM-type_fold	pfam_DUF625,superfamily_ARM-type_fold	-	no_errors	SMEK2	HGNC	ENSG00000138041				72	0	0	50	15	23.0769
C2orf42	0	genome.wustl.edu	37	2	70392682	70392682	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	70392682	70392682	T	-	DEL	C2orf42	ENST00000264434	human	ensembl	74_37	-1	known	frame_shift_del	c.1230	p.K410fs	1.000	NULL	NULL	-	no_errors	C2orf42	HGNC	ENSG00000115998				65	0	0	45	19	29.6875
LRRTM1	0	genome.wustl.edu	37	2	80530804	80530804	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	80530804	80530804	C	-	DEL	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	frame_shift_del	c.141	p.R48fs	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951				45	0	0	33	13	28.2609
CTNNA2	0	genome.wustl.edu	37	2	80816547	80816549	+	In_Frame_Del	DEL	ATG	ATG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	ATG	ATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	80816547	80816549	ATG	-	DEL	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	in_frame_del	c.2228_2230	p.D744in_frame_del	1.000:1.000:1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				117	0	0	64	20	23.8095
SUCLG1	0	genome.wustl.edu	37	2	84650857	84650857	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	2	84650857	84650857	T	-	DEL	SUCLG1	ENST00000491123	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SUCLG1	HGNC	ENSG00000163541				21	0	0	13	2	13.3333
SIRPB1	0	genome.wustl.edu	37	20	1584702	1584702	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	1584702	1584702	G	-	DEL	SIRPB1	ENST00000279477	human	ensembl	74_37	-1	known	frame_shift_del	c.838	p.Q280fs	0.023	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	SIRPB1	HGNC	ENSG00000101307				77	0	0	26	15	36.5854
RIN2	0	genome.wustl.edu	37	20	19981452	19981453	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	19981452	19981453	-	A	INS	RIN2	ENST00000255006	human	ensembl	74_37	+1	known	frame_shift_ins	c.2707_2708	p.I905fs	1.000:1.000	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	pfam_VPS9,pfam_Ras-assoc,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN2	HGNC	ENSG00000132669				61	0	0	35	16	31.3725
CD93	0	genome.wustl.edu	37	20	23065992	23065992	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	23065992	23065992	C	-	DEL	CD93	ENST00000246006	human	ensembl	74_37	-1	known	frame_shift_del	c.838	p.D280fs	0.033	pirsf_CD93/CD141,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810				225	1	0.442478	141	38	21.2291
GDF5	0	genome.wustl.edu	37	20	34025211	34025211	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	34025211	34025211	G	-	DEL	GDF5	ENST00000374369	human	ensembl	74_37	-1	known	frame_shift_del	c.498	p.I167fs	0.997	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF5	HGNC	ENSG00000125965				127	0	0	90	31	25.6198
DDX27	0	genome.wustl.edu	37	20	47858504	47858504	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	47858504	47858504	A	-	DEL	DDX27	ENST00000371764	human	ensembl	74_37	+1	known	frame_shift_del	c.2065	p.K691fs	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX27	HGNC	ENSG00000124228				104	1	0.952381	68	42	38.1818
FAM65C	0	genome.wustl.edu	37	20	49203727	49203727	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	49203727	49203727	A	-	DEL	FAM65C	ENST00000462842	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM65C	HGNC	ENSG00000042062				26	0	0	18	4	18.1818
C20orf195	0	genome.wustl.edu	37	20	62187213	62187213	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	62187213	62187213	C	-	DEL	C20orf195	ENST00000370097	human	ensembl	74_37	+1	known	frame_shift_del	c.197	p.R67fs	0.780	NULL	superfamily_Fibronectin_type3	-	no_errors	C20orf195	HGNC	ENSG00000125531				67	0	0	26	13	33.3333
PLCB4	0	genome.wustl.edu	37	20	9352960	9352960	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	20	9352960	9352960	T	-	DEL	PLCB4	ENST00000334005	human	ensembl	74_37	+1	known	frame_shift_del	c.596	p.I199fs	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_PLC-beta_CS,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB4	HGNC	ENSG00000101333				92	0	0	38	14	26.9231
CBS	0	genome.wustl.edu	37	21	44492285	44492285	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	21	44492285	44492285	G	-	DEL	CBS	ENST00000398168	human	ensembl	74_37	-1	known	frame_shift_del	c.19	p.Q7fs	0.000	NULL	pfam_Trp_syn_b_sub_like_PLP_eny_SF,pfam_CBS_dom,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,smart_CBS_dom,tigrfam_Cysta_beta_synth	-	no_errors	CBS	HGNC	ENSG00000160200				23	0	0	5	4	44.4444
ANKRD62P1-PARP4P3	0	genome.wustl.edu	37	22	17140437	17140438	+	RNA	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	17140437	17140438	-	T	INS	ANKRD62P1-PARP4P3	ENST00000456726	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.053:0.042	-	-	-	no_errors	ANKRD62P1-PARP4P3	HGNC	ENSG00000189295				52	0	0	26	9	25.7143
GNAZ	0	genome.wustl.edu	37	22	23438488	23438488	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	23438488	23438488	G	-	DEL	GNAZ	ENST00000248996	human	ensembl	74_37	+1	known	frame_shift_del	c.606	p.Q205fs	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAZ	HGNC	ENSG00000128266				207	0	0	104	53	33.758
SMARCB1	0	genome.wustl.edu	37	22	24175857	24175859	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	24175857	24175859	AGA	-	DEL	SMARCB1	ENST00000263121	human	ensembl	74_37	+1	known	in_frame_del	c.1085_1087	p.K364in_frame_del	1.000:1.000:1.000	pfam_SNF5,pirsf_SWI_SNF_chromatin_remodel_cplx	pfam_SNF5,pirsf_SWI_SNF_chromatin_remodel_cplx	-	no_errors	SMARCB1	HGNC	ENSG00000099956				130	0	0	84	26	23.6364
LIF	0	genome.wustl.edu	37	22	30640813	30640815	+	In_Frame_Del	DEL	GTT	GTT	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GTT	GTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	30640813	30640815	GTT	-	DEL	LIF	ENST00000249075	human	ensembl	74_37	-1	known	in_frame_del	c.129_127	p.N43in_frame_del	1.000:1.000:1.000	pfam_Leukemia_IF/oncostatin,superfamily_4_helix_cytokine-like_core,smart_Leukemia_IF/oncostatin,prints_Leukemia_IF	pfam_Leukemia_IF/oncostatin,superfamily_4_helix_cytokine-like_core,smart_Leukemia_IF/oncostatin,prints_Leukemia_IF	-	no_errors	LIF	HGNC	ENSG00000128342				63	0	0	46	17	26.9841
SMTN	0	genome.wustl.edu	37	22	31485922	31485922	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	22	31485922	31485922	C	-	DEL	SMTN	ENST00000347557	human	ensembl	74_37	+1	known	frame_shift_del	c.709	p.S239fs	0.420	NULL	pfam_Smoothelin,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963				11	0	0	11	4	26.6667
ZBTB20	0	genome.wustl.edu	37	3	114058003	114058003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	114058003	114058003	G	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2075	p.P692fs	0.678	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722				78	0	0	76	20	20.8333
CD86	0	genome.wustl.edu	37	3	121828213	121828213	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	121828213	121828213	A	-	DEL	CD86	ENST00000330540	human	ensembl	74_37	+1	known	frame_shift_del	c.805	p.K269fs	0.015	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	CD86	HGNC	ENSG00000114013				206	0	0	135	43	24.1573
AMOTL2	0	genome.wustl.edu	37	3	134086562	134086562	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	134086562	134086562	G	-	DEL	AMOTL2	ENST00000249883	human	ensembl	74_37	-1	known	frame_shift_del	c.818	p.P273fs	0.006	NULL	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL2	HGNC	ENSG00000114019				56	0	0	51	10	16.3934
PPP2R3A	0	genome.wustl.edu	37	3	135721069	135721069	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	135721069	135721069	A	-	DEL	PPP2R3A	ENST00000264977	human	ensembl	74_37	+1	known	frame_shift_del	c.729	p.K245fs	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	PPP2R3A	HGNC	ENSG00000073711				60	0	0	45	12	21.0526
MRPS22	0	genome.wustl.edu	37	3	139067040	139067040	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	139067040	139067040	A	-	DEL	MRPS22	ENST00000310776	human	ensembl	74_37	+1	known	frame_shift_del	c.378	p.M128fs	0.996	pfam_Ribosomal_S22_mit	pfam_Ribosomal_S22_mit	-	no_errors	MRPS22	HGNC	ENSG00000175110				68	0	0	54	19	26.0274
U2SURP	0	genome.wustl.edu	37	3	142773947	142773948	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	142773947	142773948	-	A	INS	U2SURP	ENST00000473835	human	ensembl	74_37	+1	known	frame_shift_ins	c.2937_2938	p.A981fs	1.000:1.000	NULL	pfam_Surp,pfam_RRM_dom,superfamily_Surp,superfamily_ENTH_VHS,smart_RRM_dom,smart_Surp,smart_CID_dom,pfscan_Surp,pfscan_RRM_dom	-	no_errors	U2SURP	HGNC	ENSG00000163714				15	0	0	15	6	28.5714
DHX36	0	genome.wustl.edu	37	3	154032978	154032978	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	154032978	154032978	T	-	DEL	DHX36	ENST00000496811	human	ensembl	74_37	-1	known	frame_shift_del	c.460	p.M154fs	0.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX36	HGNC	ENSG00000174953				63	0	0	45	7	13.4615
PLCH1	0	genome.wustl.edu	37	3	155212244	155212245	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	155212244	155212245	-	T	INS	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	frame_shift_ins	c.1921_1920	p.S640fs	0.993:0.991	pfam_PLipase_C_Pinositol-sp_Y,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_Pinositol-sp_Y,pfscan_PLipase_C_Pinositol-sp_Y	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805				89	0	0	77	21	21.4286
SHOX2	0	genome.wustl.edu	37	3	157823897	157823897	+	RNA	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	157823897	157823897	C	-	DEL	SHOX2	ENST00000554685	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SHOX2	HGNC	ENSG00000168779				17	0	0	18	3	14.2857
RSRC1	0	genome.wustl.edu	37	3	158254981	158254982	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	158254981	158254982	-	A	INS	RSRC1	ENST00000295930	human	ensembl	74_37	+1	known	frame_shift_ins	c.753_754	p.S253fs	1.000:1.000	NULL	NULL	-	no_errors	RSRC1	HGNC	ENSG00000174891				59	0	0	33	6	15.3846
DGKG	0	genome.wustl.edu	37	3	185978239	185978239	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	185978239	185978239	C	-	DEL	DGKG	ENST00000265022	human	ensembl	74_37	-1	known	frame_shift_del	c.1413	p.P472fs	0.487	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKG	HGNC	ENSG00000058866				43	0	0	29	4	12.1212
SGOL1	0	genome.wustl.edu	37	3	20212755	20212755	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	20212755	20212755	A	-	DEL	SGOL1	ENST00000460637	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SGOL1	HGNC	ENSG00000129810				27	0	0	17	7	29.1667
HMGB1P5	0	genome.wustl.edu	37	3	22423968	22423968	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	22423968	22423968	T	-	DEL	HMGB1P5	ENST00000451497	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HMGB1P5	HGNC	ENSG00000132967				50	0	0	22	7	24.1379
LRRC3B	0	genome.wustl.edu	37	3	26751452	26751452	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	26751452	26751452	A	-	DEL	LRRC3B	ENST00000396641	human	ensembl	74_37	+1	known	frame_shift_del	c.289	p.N98fs	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC3B	HGNC	ENSG00000179796				69	0	0	29	19	39.5833
ARPP21	0	genome.wustl.edu	37	3	35833708	35833708	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	35833708	35833708	A	-	DEL	ARPP21	ENST00000476052	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARPP21	HGNC	ENSG00000172995				21	0	0	12	13	52
ZBTB47	0	genome.wustl.edu	37	3	42700957	42700957	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	42700957	42700957	C	-	DEL	ZBTB47	ENST00000232974	human	ensembl	74_37	+1	known	frame_shift_del	c.1110	p.P372fs	0.000	NULL	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB47	HGNC	ENSG00000114853				17	0	0	7	2	22.2222
CYP8B1	0	genome.wustl.edu	37	3	42916994	42916994	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	42916994	42916994	T	-	DEL	CYP8B1	ENST00000316161	human	ensembl	74_37	-1	known	frame_shift_del	c.315	p.K105fs	0.004	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I	-	no_errors	CYP8B1	HGNC	ENSG00000180432				87	0	0	53	23	30.2632
CCR3	0	genome.wustl.edu	37	3	46307343	46307343	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	46307343	46307343	A	-	DEL	CCR3	ENST00000545097	human	ensembl	74_37	+1	known	frame_shift_del	c.757	p.K255fs	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR3,prints_Chemokine_CCR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR3,prints_Chemokine_CCR1	-	no_errors	CCR3	HGNC	ENSG00000183625				84	0	0	45	19	29.6875
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				65	0	0	37	8	17.7778
CACNA2D3	0	genome.wustl.edu	37	3	54596940	54596940	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	54596940	54596940	T	-	DEL	CACNA2D3	ENST00000288197	human	ensembl	74_37	+1	known	frame_shift_del	c.658	p.F221fs	1.000	pfam_VWA_N	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445				34	0	0	26	11	29.7297
FLNB	0	genome.wustl.edu	37	3	58089787	58089788	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	58089787	58089788	-	G	INS	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	frame_shift_ins	c.1585_1586	p.H532fs	1.000:1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				114	0	0	53	12	18.4615
SETD5	0	genome.wustl.edu	37	3	9517703	9517704	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	3	9517703	9517704	-	G	INS	SETD5	ENST00000402198	human	ensembl	74_37	+1	known	frame_shift_ins	c.4257_4258	p.V1421fs	0.999:1.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SETD5	HGNC	ENSG00000168137				41	0	0	38	8	17.3913
CFI	0	genome.wustl.edu	37	4	110687927	110687927	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	110687927	110687927	T	-	DEL	CFI	ENST00000394634	human	ensembl	74_37	-1	known	frame_shift_del	c.111	p.K37fs	0.482	NULL	pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_FacI_MAC,smart_Srcr_rcpt-rel,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,pfscan_LDrepeatLR_classA_rpt,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	CFI	HGNC	ENSG00000205403				83	0	0	39	18	31.5789
ARSJ	0	genome.wustl.edu	37	4	114823494	114823494	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	114823494	114823494	T	-	DEL	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	frame_shift_del	c.1736	p.K579fs	0.628	NULL	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801				34	0	0	21	12	36.3636
PRDM5	0	genome.wustl.edu	37	4	121738028	121738028	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	121738028	121738028	A	-	DEL	PRDM5	ENST00000264808	human	ensembl	74_37	-1	known	frame_shift_del	c.702	p.Q235fs	0.682	smart_Znf_C2H2-like,pirsf_Znf_PRDM5,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM5,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM5	HGNC	ENSG00000138738				330	0	0	130	55	29.7297
EXOSC9	0	genome.wustl.edu	37	4	122723894	122723894	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	122723894	122723894	T	-	DEL	EXOSC9	ENST00000379663	human	ensembl	74_37	+1	known	frame_shift_del	c.227	p.F78fs	1.000	pfam_ExoRNase_PH_dom1,superfamily_Ribosomal_S5_D2-typ_fold	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2	-	no_errors	EXOSC9	HGNC	ENSG00000123737				123	0	0	74	28	27.451
CPEB2	0	genome.wustl.edu	37	4	15067858	15067858	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	15067858	15067858	T	-	DEL	CPEB2	ENST00000538197	human	ensembl	74_37	+1	known	frame_shift_del	c.2959	p.C989fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPEB2	HGNC	ENSG00000137449				148	1	0.671141	83	18	17.8218
FBXW7	0	genome.wustl.edu	37	4	153273636	153273636	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	153273636	153273636	T	-	DEL	FBXW7	ENST00000263981	human	ensembl	74_37	-1	known	frame_shift_del	c.247	p.M83fs	1.000	NULL	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670				54	0	0	27	17	38.6364
SNX25	0	genome.wustl.edu	37	4	186272695	186272695	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	186272695	186272695	A	-	DEL	SNX25	ENST00000264694	human	ensembl	74_37	+1	known	frame_shift_del	c.1906	p.N638fs	1.000	NULL	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_RGS_dom,pfam_Phox,superfamily_Regulat_G_prot_signal_superfam,superfamily_Phox,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal_superfam,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	SNX25	HGNC	ENSG00000109762				84	0	0	56	31	35.6322
RBPJ	0	genome.wustl.edu	37	4	26426086	26426086	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	26426086	26426086	T	-	DEL	RBPJ	ENST00000342295	human	ensembl	74_37	+1	known	frame_shift_del	c.658	p.F221fs	1.000	pfam_Beta-trefoil_DNA-bd_dom,superfamily_Beta-trefoil_DNA-bd_dom	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,pfam_IPT,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJ	HGNC	ENSG00000168214				114	0	0	72	36	33.3333
PDS5A	0	genome.wustl.edu	37	4	39915250	39915251	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	39915250	39915251	AA	-	DEL	PDS5A	ENST00000303538	human	ensembl	74_37	-1	known	frame_shift_del	c.973_972	p.W325fs	1.000:1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5A	HGNC	ENSG00000121892				93	0	0	44	18	29.0323
CORIN	0	genome.wustl.edu	37	4	47647195	47647196	+	Frame_Shift_Ins	INS	-	-	TC			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	47647195	47647196	-	TC	INS	CORIN	ENST00000273857	human	ensembl	74_37	-1	known	frame_shift_ins	c.1860_1859	p.D620fs	0.996:1.000	pirsf_Peptidase_S1A_corin,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pirsf_Peptidase_S1A_corin,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_Frizzled_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_Frizzled_dom,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,prints_LDrepeatLR_classA_rpt,prints_Peptidase_S1A,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	CORIN	HGNC	ENSG00000145244				139	0	0	71	35	33.0189
EPHA5	0	genome.wustl.edu	37	4	66467928	66467928	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	66467928	66467928	A	-	DEL	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	frame_shift_del	c.341	p.L114fs	1.000	pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom,pirsf_Tyr_kinase_ephrin_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				148	0	0	60	23	27.7108
EPHA5	0	genome.wustl.edu	37	4	66509085	66509085	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	66509085	66509085	T	-	DEL	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	frame_shift_del	c.242	p.N81fs	1.000	pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom,pirsf_Tyr_kinase_ephrin_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				82	0	0	41	21	33.871
SLC4A4	0	genome.wustl.edu	37	4	72205146	72205146	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	72205146	72205146	C	-	DEL	SLC4A4	ENST00000425175	human	ensembl	74_37	+1	known	frame_shift_del	c.313	p.P106fs	1.000	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A4	HGNC	ENSG00000080493				152	0	0	132	39	22.807
HERC3	0	genome.wustl.edu	37	4	89628027	89628029	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	4	89628027	89628029	CCT	-	DEL	HERC3	ENST00000264345	human	ensembl	74_37	+1	known	in_frame_del	c.3069_3071	p.L1024in_frame_del	1.000:1.000:1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_Reg_chr_condens,pfam_HECT,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC3	HGNC	ENSG00000138641				98	0	0	60	21	25.9259
RAPGEF6	0	genome.wustl.edu	37	5	130799880	130799880	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	130799880	130799880	A	-	DEL	RAPGEF6	ENST00000509018	human	ensembl	74_37	-1	known	frame_shift_del	c.2334	p.H779fs	0.911	pfam_Ras-assoc,superfamily_Ras_GEF_dom,smart_Ras-assoc,pfscan_Ras-assoc	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987				62	0	0	18	17	48.5714
SLC22A5	0	genome.wustl.edu	37	5	131722731	131722731	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	131722731	131722731	C	-	DEL	SLC22A5	ENST00000435065	human	ensembl	74_37	+1	known	frame_shift_del	c.911	p.R306fs	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A5	HGNC	ENSG00000197375				285	0	0	157	71	31.1404
TCF7	0	genome.wustl.edu	37	5	133479285	133479287	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	133479285	133479287	GAA	-	DEL	TCF7	ENST00000321584	human	ensembl	74_37	+1	known	in_frame_del	c.1029_1031	p.K346in_frame_del	0.993:1.000:1.000	NULL	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7	HGNC	ENSG00000081059				61	0	0	29	12	29.2683
WDR55	0	genome.wustl.edu	37	5	140049102	140049102	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	140049102	140049102	A	-	DEL	WDR55	ENST00000358337	human	ensembl	74_37	+1	known	frame_shift_del	c.1015	p.K341fs	1.000	pirsf_WD_repeat_p55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p55,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR55	HGNC	ENSG00000120314				44	0	0	32	9	21.9512
RELL2	0	genome.wustl.edu	37	5	141019218	141019219	+	Splice_Site	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	141019218	141019219	-	G	INS	RELL2	ENST00000297164	human	ensembl	74_37	+1	known	splice_site_ins	c.503+2_503+1	e4+2	1.000:0.964	-	-	-	no_errors	RELL2	HGNC	ENSG00000164620				37	0	0	33	4	10.8108
TRIO	0	genome.wustl.edu	37	5	14477004	14477004	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	14477004	14477004	T	-	DEL	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	frame_shift_del	c.6085	p.L2031fs	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382				40	0	0	18	9	33.3333
SPINK5	0	genome.wustl.edu	37	5	147499875	147499875	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	147499875	147499875	A	-	DEL	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	frame_shift_del	c.2459	p.K823fs	0.998	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710				19	0	0	7	14	66.6667
TTC1	0	genome.wustl.edu	37	5	159437837	159437837	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	159437837	159437837	A	-	DEL	TTC1	ENST00000231238	human	ensembl	74_37	+1	known	frame_shift_del	c.302	p.N103fs	1.000	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC1	HGNC	ENSG00000113312				66	0	0	30	10	25
MYO10	0	genome.wustl.edu	37	5	16694605	16694606	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	16694605	16694606	-	C	INS	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	frame_shift_ins	c.3675_3674	p.S1226fs	1.000:1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				157	0	0	105	30	22.2222
RNF44	0	genome.wustl.edu	37	5	175957911	175957911	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	175957911	175957911	G	-	DEL	RNF44	ENST00000274811	human	ensembl	74_37	-1	known	frame_shift_del	c.577	p.Q193fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF44	HGNC	ENSG00000146083				14	0	0	6	7	53.8462
FAM193B	0	genome.wustl.edu	37	5	176966140	176966140	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	176966140	176966140	G	-	DEL	FAM193B	ENST00000514747	human	ensembl	74_37	-1	novel	frame_shift_del	c.219	p.A74fs	0.001	NULL	NULL	-	no_errors	FAM193B	HGNC	ENSG00000146067				9	0	0	5	3	37.5
ZNF354A	0	genome.wustl.edu	37	5	178140325	178140326	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	178140325	178140326	-	T	INS	ZNF354A	ENST00000335815	human	ensembl	74_37	-1	known	frame_shift_ins	c.554_553	p.T185fs	0.041:0.049	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF354A	HGNC	ENSG00000169131				247	0	0	130	48	26.9663
NIPBL	0	genome.wustl.edu	37	5	37064899	37064899	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	37064899	37064899	A	-	DEL	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	frame_shift_del	c.8320	p.I2776fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				60	0	0	25	24	48.9796
ZNF131	0	genome.wustl.edu	37	5	43173517	43173517	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	43173517	43173517	A	-	DEL	ZNF131	ENST00000399534	human	ensembl	74_37	+1	known	frame_shift_del	c.1152	p.G387fs	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZNF131	HGNC	ENSG00000172262				47	0	0	22	11	33.3333
ADAMTS6	0	genome.wustl.edu	37	5	64766683	64766684	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	64766683	64766684	-	A	INS	ADAMTS6	ENST00000381055	human	ensembl	74_37	-1	known	frame_shift_ins	c.384_383	p.L128fs	1.000:1.000	pfam_Peptidase_M12B_N	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS6	HGNC	ENSG00000049192				47	0	0	42	12	22.2222
BDP1	0	genome.wustl.edu	37	5	70766233	70766233	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	70766233	70766233	T	-	DEL	BDP1	ENST00000358731	human	ensembl	74_37	+1	known	frame_shift_del	c.931	p.L313fs	1.000	superfamily_Homeodomain-like,smart_SANT/Myb	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	BDP1	HGNC	ENSG00000145734				42	0	0	33	7	17.5
AP3B1	0	genome.wustl.edu	37	5	77334907	77334907	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	77334907	77334907	T	-	DEL	AP3B1	ENST00000255194	human	ensembl	74_37	-1	known	frame_shift_del	c.2769	p.K923fs	0.419	pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	-	no_errors	AP3B1	HGNC	ENSG00000132842				47	0	0	45	6	11.7647
FAM151B	0	genome.wustl.edu	37	5	79815642	79815642	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	79815642	79815642	T	-	DEL	FAM151B	ENST00000282226	human	ensembl	74_37	+1	known	frame_shift_del	c.448	p.L151fs	0.996	pfam_DUF2181	pfam_DUF2181	-	no_errors	FAM151B	HGNC	ENSG00000152380				118	0	0	55	29	34.5238
MSH3	0	genome.wustl.edu	37	5	79970915	79970916	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	79970915	79970916	AA	-	DEL	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	frame_shift_del	c.1141_1142	p.K383fs	0.982:0.892	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318				200	0	0	111	37	25
LYSMD3	0	genome.wustl.edu	37	5	89814637	89814638	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	5	89814637	89814638	TA	-	DEL	LYSMD3	ENST00000315948	human	ensembl	74_37	-1	known	frame_shift_del	c.920_919	p.*307fs	0.955:0.931	NULL	pfam_LysM_dom,smart_LysM_dom	-	no_errors	LYSMD3	HGNC	ENSG00000176018				154	0	0	60	28	31.8182
GCNT2	0	genome.wustl.edu	37	6	10557410	10557410	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	10557410	10557410	C	-	DEL	GCNT2	ENST00000316170	human	ensembl	74_37	+1	known	frame_shift_del	c.754	p.H254fs	1.000	pfam_Glyco_trans_14	pfam_Glyco_trans_14	-	no_errors	GCNT2	HGNC	ENSG00000111846				100	0	0	42	25	37.3134
KIAA1919	0	genome.wustl.edu	37	6	111587361	111587361	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	111587361	111587361	T	-	DEL	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	frame_shift_del	c.596	p.C202fs	0.469	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214				54	0	0	39	7	15.2174
MED23	0	genome.wustl.edu	37	6	131917389	131917389	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	131917389	131917389	T	-	DEL	MED23	ENST00000479213	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MED23	HGNC	ENSG00000112282				10	0	0	8	10	55.5556
PERP	0	genome.wustl.edu	37	6	138417555	138417557	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	138417555	138417557	GAA	-	DEL	PERP	ENST00000421351	human	ensembl	74_37	-1	known	in_frame_del	c.291_289	p.F97in_frame_del	0.990:1.000:1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin	-	no_errors	PERP	HGNC	ENSG00000112378				47	0	0	18	6	25
HIVEP2	0	genome.wustl.edu	37	6	143081633	143081634	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	143081633	143081634	-	T	INS	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	frame_shift_ins	c.5792_5791	p.T1931fs	1.000:1.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818				55	0	0	46	13	22.0339
JARID2	0	genome.wustl.edu	37	6	15496635	15496636	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	15496635	15496636	-	G	INS	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	frame_shift_ins	c.1179_1180	p.A395fs	1.000:1.000	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				213	0	0	103	29	21.9697
ARID1B	0	genome.wustl.edu	37	6	157502210	157502211	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	157502210	157502211	AG	-	DEL	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	frame_shift_del	c.3363_3364	p.G1124fs	0.950:1.000	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618				71	0	0	32	10	23.8095
LPAL2	0	genome.wustl.edu	37	6	160887595	160887595	+	RNA	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	160887595	160887595	T	-	DEL	LPAL2	ENST00000606083	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.621	-	-	-	no_errors	LPAL2	HGNC	ENSG00000213071				10	0	0	5	3	37.5
QKI	0	genome.wustl.edu	37	6	163899920	163899920	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	163899920	163899920	A	-	DEL	QKI	ENST00000361752	human	ensembl	74_37	+1	known	frame_shift_del	c.394	p.K134fs	1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531				90	0	0	49	24	32.8767
GPX5	0	genome.wustl.edu	37	6	28502011	28502011	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	28502011	28502011	A	-	DEL	GPX5	ENST00000442674	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPX5	HGNC	ENSG00000224586				25	0	0	14	5	26.3158
OR12D3	0	genome.wustl.edu	37	6	29342656	29342656	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	29342656	29342656	G	-	DEL	OR12D3	ENST00000396806	human	ensembl	74_37	-1	known	frame_shift_del	c.409	p.Q137fs	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR12D3	HGNC	ENSG00000112462				71	0	0	42	12	22.2222
RNF39	0	genome.wustl.edu	37	6	30040952	30040952	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	30040952	30040952	T	-	DEL	RNF39	ENST00000244360	human	ensembl	74_37	-1	known	frame_shift_del	c.664	p.M222fs	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RNF39	HGNC	ENSG00000204618				114	0	0	51	24	32
HLA-B	0	genome.wustl.edu	37	6	31324892	31324892	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	31324892	31324892	G	-	DEL	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.A15fs	0.014	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745				12	0	0	2	3	60
NELFE	0	genome.wustl.edu	37	6	31926206	31926206	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	31926206	31926206	G	-	DEL	NELFE	ENST00000375429	human	ensembl	74_37	-1	known	frame_shift_del	c.18	p.G7fs	0.996	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NELFE	HGNC	ENSG00000204356				125	0	0	70	21	23.0769
RING1	0	genome.wustl.edu	37	6	33178990	33178990	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	33178990	33178990	G	-	DEL	RING1	ENST00000374656	human	ensembl	74_37	+1	known	frame_shift_del	c.511	p.E173fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RING1	HGNC	ENSG00000204227				212	0	0	137	51	27.1277
UHRF1BP1	0	genome.wustl.edu	37	6	34839369	34839369	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	34839369	34839369	C	-	DEL	UHRF1BP1	ENST00000192788	human	ensembl	74_37	+1	known	frame_shift_del	c.3990	p.I1333fs	1.000	NULL	NULL	-	no_errors	UHRF1BP1	HGNC	ENSG00000065060				87	0	0	30	17	36.1702
ANKS1A	0	genome.wustl.edu	37	6	34951143	34951143	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	34951143	34951143	C	-	DEL	ANKS1A	ENST00000360359	human	ensembl	74_37	+1	known	frame_shift_del	c.953	p.P320fs	0.002	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_PTB/PI_dom,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,smart_PTB/PI_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PTB/PI_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS1A	HGNC	ENSG00000064999				121	0	0	73	30	29.1262
C6orf89	0	genome.wustl.edu	37	6	36867371	36867371	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	36867371	36867371	C	-	DEL	C6orf89	ENST00000355190	human	ensembl	74_37	+1	known	frame_shift_del	c.172	p.P60fs	0.991	NULL	NULL	-	no_errors	C6orf89	HGNC	ENSG00000198663				83	0	0	62	12	16.2162
CD2AP	0	genome.wustl.edu	37	6	47575649	47575649	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	47575649	47575649	A	-	DEL	CD2AP	ENST00000486693	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	CD2AP	HGNC	ENSG00000198087				128	0	0	66	21	24.1379
KIAA1009	0	genome.wustl.edu	37	6	84925098	84925098	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	84925098	84925098	A	-	DEL	KIAA1009	ENST00000403245	human	ensembl	74_37	-1	known	frame_shift_del	c.405	p.F135fs	1.000	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315				17	0	0	15	6	28.5714
HTR1E	0	genome.wustl.edu	37	6	87725846	87725847	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	6	87725846	87725847	-	C	INS	HTR1E	ENST00000305344	human	ensembl	74_37	+1	known	frame_shift_ins	c.794_795	p.F268fs	1.000:1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR1E	HGNC	ENSG00000168830				253	0	0	156	56	26.4151
SRRT	0	genome.wustl.edu	37	7	100479332	100479332	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	100479332	100479332	G	-	DEL	SRRT	ENST00000388793	human	ensembl	74_37	+1	known	frame_shift_del	c.304	p.G104fs	1.000	NULL	pfam_Arsenite-R_2,pfam_DUF3546	-	no_errors	SRRT	HGNC	ENSG00000087087				61	0	0	53	32	37.6471
DPY19L2P2	0	genome.wustl.edu	37	7	102912317	102912318	+	Splice_Site	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	102912317	102912318	-	T	INS	DPY19L2P2	ENST00000312132	human	ensembl	74_37	-1	known	splice_site_ins	c.NULL	NULL	1.000:1.000	-	-	-	no_errors	DPY19L2P2	HGNC	ENSG00000170629				37	0	0	33	16	32.6531
PTN	0	genome.wustl.edu	37	7	136938332	136938333	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	136938332	136938333	CA	-	DEL	PTN	ENST00000348225	human	ensembl	74_37	-1	known	frame_shift_del	c.168_167	p.V56fs	1.000:1.000	pfam_PTN/MK_N_dom,superfamily_PTN/MK_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	pfam_PTN/MK_C_dom,pfam_PTN/MK_N_dom,superfamily_PTN/MK_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	-	no_errors	PTN	HGNC	ENSG00000105894				52	0	0	47	21	30.8824
EPHB6	0	genome.wustl.edu	37	7	142562398	142562398	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	142562398	142562398	C	-	DEL	EPHB6	ENST00000392957	human	ensembl	74_37	+1	known	frame_shift_del	c.840	p.R283fs	0.997	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB6	HGNC	ENSG00000106123				104	0	0	76	49	39.2
NOS3	0	genome.wustl.edu	37	7	150698397	150698398	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	150698397	150698398	-	G	INS	NOS3	ENST00000297494	human	ensembl	74_37	+1	known	frame_shift_ins	c.1312_1313	p.C441fs	0.998:1.000	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS3	HGNC	ENSG00000164867				109	0	0	102	29	22.1374
INTS1	0	genome.wustl.edu	37	7	1544207	1544208	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	1544207	1544208	-	CC	INS	INTS1	ENST00000389470	human	ensembl	74_37	-1	known	frame_shift_ins	c.95_94	p.A32fs	0.000:0.000	NULL	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880				32	0	0	11	16	59.2593
IGF2BP3	0	genome.wustl.edu	37	7	23387379	23387379	+	RNA	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	23387379	23387379	A	-	DEL	IGF2BP3	ENST00000497563	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IGF2BP3	HGNC	ENSG00000136231				35	0	0	34	31	47.6923
FKBP9	0	genome.wustl.edu	37	7	33014804	33014804	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	33014804	33014804	C	-	DEL	FKBP9	ENST00000538336	human	ensembl	74_37	+1	known	frame_shift_del	c.537	p.N182fs	0.998	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP9	HGNC	ENSG00000122642				99	0	0	47	26	35.6164
NPC1L1	0	genome.wustl.edu	37	7	44576448	44576448	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	44576448	44576448	C	-	DEL	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	frame_shift_del	c.1674	p.Y559fs	0.134	NULL	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				80	0	0	35	26	42.623
TRIM50	0	genome.wustl.edu	37	7	72732951	72732951	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	72732951	72732951	C	-	DEL	TRIM50	ENST00000333149	human	ensembl	74_37	-1	known	frame_shift_del	c.596	p.G199fs	0.029	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM50	HGNC	ENSG00000146755				134	0	0	129	38	22.7545
PCLO	0	genome.wustl.edu	37	7	82390055	82390055	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	82390055	82390055	T	-	DEL	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	frame_shift_del	c.15188	p.K5063fs	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472				28	0	0	28	22	44
DBF4	0	genome.wustl.edu	37	7	87507389	87507389	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	7	87507389	87507389	A	-	DEL	DBF4	ENST00000265728	human	ensembl	74_37	+1	known	frame_shift_del	c.68	p.N25fs	1.000	NULL	pfam_Znf_DBF,superfamily_BRCT_dom,smart_Znf_DBF	-	no_errors	DBF4	HGNC	ENSG00000006634				151	0	0	98	72	42.3529
VPS13B	0	genome.wustl.edu	37	8	100865890	100865890	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	100865890	100865890	G	-	DEL	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	frame_shift_del	c.10348	p.D3451fs	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				87	0	0	102	26	20.3125
LRP12	0	genome.wustl.edu	37	8	105509429	105509429	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	105509429	105509429	A	-	DEL	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	frame_shift_del	c.1294	p.C432fs	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650				154	0	0	107	29	21.3235
ANXA13	0	genome.wustl.edu	37	8	124707762	124707762	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	124707762	124707762	T	-	DEL	ANXA13	ENST00000262219	human	ensembl	74_37	-1	known	frame_shift_del	c.574	p.I192fs	0.994	pfam_Annexin_repeat,smart_Annexin_repeat	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinXIII	-	no_errors	ANXA13	HGNC	ENSG00000104537				236	0	0	177	53	23.0435
SQLE	0	genome.wustl.edu	37	8	126011893	126011893	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	126011893	126011893	C	-	DEL	SQLE	ENST00000265896	human	ensembl	74_37	+1	known	frame_shift_del	c.248	p.P85fs	0.028	NULL	pfam_Squalene_epoxidase,pfam_mOase_FAD-bd,pfam_Pyr_OxRdtase_NAD-bd_dom,prints_Rng_hydrolase-like	-	no_errors	SQLE	HGNC	ENSG00000104549				39	0	0	33	7	17.5
PHF20L1	0	genome.wustl.edu	37	8	133837586	133837586	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	133837586	133837586	A	-	DEL	PHF20L1	ENST00000395386	human	ensembl	74_37	+1	putative	frame_shift_del	c.1714	p.K574fs	1.000	NULL	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Tudor-like_plant	-	no_errors	PHF20L1	HGNC	ENSG00000129292				17	0	0	8	4	33.3333
PTK2	0	genome.wustl.edu	37	8	141754889	141754892	+	RNA	DEL	AAAA	AAAA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	141754889	141754892	AAAA	-	DEL	PTK2	ENST00000518509	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.004:0.005:0.002	-	-	-	no_errors	PTK2	HGNC	ENSG00000169398				33	0	0	31	7	18.4211
EPPK1	0	genome.wustl.edu	37	8	144941378	144941378	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	144941378	144941378	C	-	DEL	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	frame_shift_del	c.6044	p.G2015fs	0.996	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				39	0	0	42	19	31.1475
CYC1	0	genome.wustl.edu	37	8	145150876	145150876	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	145150876	145150876	C	-	DEL	CYC1	ENST00000318911	human	ensembl	74_37	+1	known	frame_shift_del	c.270	p.S93fs	1.000	superfamily_Cyt_c-like_dom	pfam_Cyt_c1,superfamily_Cyt_c-like_dom,superfamily_Cyt_c1_TM_anchor_C,prints_Cyt_c1	-	no_errors	CYC1	HGNC	ENSG00000179091				99	0	0	99	29	22.6562
CCAR2	0	genome.wustl.edu	37	8	22472975	22472975	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	22472975	22472975	C	-	DEL	CCAR2	ENST00000308511	human	ensembl	74_37	+1	known	frame_shift_del	c.1243	p.R417fs	1.000	NULL	superfamily_NA-bd_OB-fold	-	no_errors	CCAR2	HGNC	ENSG00000158941				191	0	0	182	58	24.1667
LOXL2	0	genome.wustl.edu	37	8	23155605	23155605	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	23155605	23155605	T	-	DEL	LOXL2	ENST00000389131	human	ensembl	74_37	-1	known	frame_shift_del	c.2276	p.K759fs	0.994	NULL	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL2	HGNC	ENSG00000134013				50	0	0	38	8	17.3913
SCARA5	0	genome.wustl.edu	37	8	27729504	27729504	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	27729504	27729504	C	-	DEL	SCARA5	ENST00000354914	human	ensembl	74_37	-1	known	frame_shift_del	c.1435	p.V479fs	1.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,pfam_Collagen,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	SCARA5	HGNC	ENSG00000168079				110	0	0	101	31	23.4848
FBXO25	0	genome.wustl.edu	37	8	381399	381399	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	381399	381399	A	-	DEL	FBXO25	ENST00000276326	human	ensembl	74_37	+1	known	frame_shift_del	c.193	p.R67fs	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO25	HGNC	ENSG00000147364				87	0	0	55	13	19.1176
KAT6A	0	genome.wustl.edu	37	8	41834604	41834604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	41834604	41834604	C	-	DEL	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	frame_shift_del	c.1285	p.E429fs	1.000	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				122	0	0	82	23	21.9048
MTFR1	0	genome.wustl.edu	37	8	66619376	66619377	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	66619376	66619377	AA	-	DEL	MTFR1	ENST00000262146	human	ensembl	74_37	+1	known	frame_shift_del	c.649_650	p.R218fs	0.978:0.897	pfam_Mtfr1	pfam_Mtfr1	-	no_errors	MTFR1	HGNC	ENSG00000066855				84	0	0	62	19	23.4568
MYBL1	0	genome.wustl.edu	37	8	67488453	67488453	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	67488453	67488453	T	-	DEL	MYBL1	ENST00000522677	human	ensembl	74_37	-1	known	frame_shift_del	c.1259	p.N420fs	0.992	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697				167	0	0	155	55	26.1905
SGK3	0	genome.wustl.edu	37	8	67752203	67752204	+	RNA	DEL	TC	TC	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	67752203	67752204	TC	-	DEL	SGK3	ENST00000521435	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	SGK3	HGNC	ENSG00000104205				31	0	0	38	16	29.6296
TERF1	0	genome.wustl.edu	37	8	73921284	73921286	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	73921284	73921286	GAG	-	DEL	TERF1	ENST00000276603	human	ensembl	74_37	+1	known	in_frame_del	c.163_165	p.E58in_frame_del	0.121:0.130:0.144	pirsf_Telomere_repeat-bd-1/2	pfam_Telomere_rpt-bd_fac_dimer_dom,pfam_SANT/Myb,superfamily_Telomere_rpt-bd_fac_dimer_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Telomere_repeat-bd-1/2,pfscan_Myb-like_dom	-	no_errors	TERF1	HGNC	ENSG00000147601				22	0	0	12	4	25
E2F5	0	genome.wustl.edu	37	8	86114461	86114461	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	86114461	86114461	A	-	DEL	E2F5	ENST00000256117	human	ensembl	74_37	+1	known	frame_shift_del	c.314	p.K107fs	1.000	pfam_E2F_TDP	pfam_E2F_TDP	-	no_errors	E2F5	HGNC	ENSG00000133740				28	0	0	22	6	21.4286
TNKS	0	genome.wustl.edu	37	8	9565940	9565940	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	8	9565940	9565940	A	-	DEL	TNKS	ENST00000310430	human	ensembl	74_37	+1	known	frame_shift_del	c.1516	p.T508fs	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS	HGNC	ENSG00000173273				143	1	0.694444	97	34	25.9542
INVS	0	genome.wustl.edu	37	9	103054983	103054983	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	103054983	103054983	G	-	DEL	INVS	ENST00000262457	human	ensembl	74_37	+1	known	frame_shift_del	c.2444	p.E817fs	0.977	NULL	pfam_Ankyrin_rpt,pfam_IQ_motif_EF-hand-BS,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_IQ_motif_EF-hand-BS,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Ankyrin_rpt	-	no_errors	INVS	HGNC	ENSG00000119509				77	0	0	40	19	32.2034
CYLC2	0	genome.wustl.edu	37	9	105767539	105767539	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	105767539	105767539	A	-	DEL	CYLC2	ENST00000374798	human	ensembl	74_37	+1	known	frame_shift_del	c.626	p.G211fs	0.062	NULL	NULL	-	no_errors	CYLC2	HGNC	ENSG00000155833				44	0	0	32	9	21.9512
IKBKAP	0	genome.wustl.edu	37	9	111681560	111681561	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	111681560	111681561	-	A	INS	IKBKAP	ENST00000374647	human	ensembl	74_37	-1	known	frame_shift_ins	c.622_621	p.A207fs	1.000:1.000	pfam_IKI3,pirsf_IKI3	pfam_IKI3,superfamily_ARM-type_fold,superfamily_UBA-like,pirsf_IKI3	-	no_errors	IKBKAP	HGNC	ENSG00000070061				44	0	0	27	7	20.5882
CDK5RAP2	0	genome.wustl.edu	37	9	123223027	123223027	+	Splice_Site	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	123223027	123223027	T	-	DEL	CDK5RAP2	ENST00000480112	human	ensembl	74_37	-1	known	splice_site_del	c.2104-2	e19-2	0.979	-	-	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861				14	0	0	7	7	50
DAB2IP	0	genome.wustl.edu	37	9	124536637	124536637	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	124536637	124536637	C	-	DEL	DAB2IP	ENST00000408936	human	ensembl	74_37	+1	known	frame_shift_del	c.3066	p.H1025fs	0.988	pfam_DUF3498	pfam_DUF3498,pfam_RasGAP,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	DAB2IP	HGNC	ENSG00000136848				31	0	0	11	8	42.1053
ENG	0	genome.wustl.edu	37	9	130588851	130588851	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	130588851	130588851	C	-	DEL	ENG	ENST00000373203	human	ensembl	74_37	-1	known	frame_shift_del	c.461	p.G154fs	0.770	NULL	pfam_ZP_dom	-	no_errors	ENG	HGNC	ENSG00000106991				72	0	0	33	13	28.2609
PRRC2B	0	genome.wustl.edu	37	9	134330506	134330508	+	In_Frame_Del	DEL	TGA	TGA	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	TGA	TGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	134330506	134330508	TGA	-	DEL	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	in_frame_del	c.1164_1166	p.D390in_frame_del	0.920:1.000:1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723				44	0	0	39	9	18.75
POMT1	0	genome.wustl.edu	37	9	134390826	134390827	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	134390826	134390827	-	C	INS	POMT1	ENST00000372228	human	ensembl	74_37	+1	known	frame_shift_ins	c.1255_1256	p.L421fs	0.997:0.999	pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	pfam_Glyco_trans_39,pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	-	no_errors	POMT1	HGNC	ENSG00000130714				175	0	0	92	36	28.125
ADAMTSL1	0	genome.wustl.edu	37	9	18504916	18504916	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	18504916	18504916	T	-	DEL	ADAMTSL1	ENST00000327883	human	ensembl	74_37	+1	known	frame_shift_del	c.153	p.A53fs	0.945	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,pfam_ADAM_spacer1,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031				57	0	0	44	17	27.8689
DENND4C	0	genome.wustl.edu	37	9	19346885	19346887	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	19346885	19346887	CTT	-	DEL	DENND4C	ENST00000602925	human	ensembl	74_37	+1	known	in_frame_del	c.3971_3973	p.S1325in_frame_del	0.825:0.844:1.000	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4C	HGNC	ENSG00000137145				51	0	0	45	17	27.4194
C9orf131	0	genome.wustl.edu	37	9	35043650	35043650	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	35043650	35043650	C	-	DEL	C9orf131	ENST00000312292	human	ensembl	74_37	+1	known	frame_shift_del	c.1024	p.C344fs	0.000	NULL	NULL	-	no_errors	C9orf131	HGNC	ENSG00000174038				489	1	0.204082	266	80	23.1214
VPS13A	0	genome.wustl.edu	37	9	79836219	79836219	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	79836219	79836219	A	-	DEL	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	frame_shift_del	c.1108	p.K372fs	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969				100	0	0	64	29	31.1828
NOL8	0	genome.wustl.edu	37	9	95064081	95064082	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	95064081	95064082	-	T	INS	NOL8	ENST00000442668	human	ensembl	74_37	-1	known	frame_shift_ins	c.2927_2926	p.R976fs	0.998:0.997	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NOL8	HGNC	ENSG00000198000				9	0	0	6	3	33.3333
ASPN	0	genome.wustl.edu	37	9	95221949	95221949	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	95221949	95221949	T	-	DEL	ASPN	ENST00000375544	human	ensembl	74_37	-1	known	frame_shift_del	c.910	p.I304fs	1.000	smart_Leu-rich_rpt_typical-subtyp,pirsf_SLRP_I_decor/aspor/byglycan	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pirsf_SLRP_I_decor/aspor/byglycan	-	no_errors	ASPN	HGNC	ENSG00000106819				59	0	0	29	15	34.0909
FANCC	0	genome.wustl.edu	37	9	98003011	98003011	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	9	98003011	98003011	T	-	DEL	FANCC	ENST00000289081	human	ensembl	74_37	-1	known	frame_shift_del	c.265	p.I89fs	0.999	pfam_Fanconi,pirsf_Fanconi,prints_Fanconi	pfam_Fanconi,pirsf_Fanconi,prints_Fanconi	-	no_errors	FANCC	HGNC	ENSG00000158169				60	0	0	40	18	31.0345
RNF128	0	genome.wustl.edu	37	X	105937256	105937256	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	105937256	105937256	T	-	DEL	RNF128	ENST00000324342	human	ensembl	74_37	+1	known	frame_shift_del	c.24	p.W11fs	0.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF128	HGNC	ENSG00000133135				63	0	0	45	16	26.2295
IRS4	0	genome.wustl.edu	37	X	107977802	107977803	+	Frame_Shift_Ins	INS	-	-	C			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	107977802	107977803	-	C	INS	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	frame_shift_ins	c.1773_1772	p.K592fs	0.031:0.016	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124				368	2	0.540541	204	77	27.4021
PLS3	0	genome.wustl.edu	37	X	114879381	114879382	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	114879381	114879382	CT	-	DEL	PLS3	ENST00000355899	human	ensembl	74_37	+1	known	frame_shift_del	c.1224_1225	p.L410fs	0.998:1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_EF_hand_dom,smart_CH-domain,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	PLS3	HGNC	ENSG00000102024				172	0	0	88	45	33.8346
MIR1277	0	genome.wustl.edu	37	X	117520365	117520366	+	RNA	INS	-	-	AT			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	117520365	117520366	-	AT	INS	MIR1277	ENST00000408536	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.986	-	-	-	no_errors	MIR1277	HGNC	ENSG00000221463				74	0	0	48	6	11.1111
CXorf56	0	genome.wustl.edu	37	X	118678354	118678354	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	118678354	118678354	T	-	DEL	CXorf56	ENST00000371594	human	ensembl	74_37	-1	known	frame_shift_del	c.385	p.T129fs	1.000	NULL	NULL	-	no_errors	CXorf56	HGNC	ENSG00000018610				154	0	0	68	39	36.4486
BCORL1	0	genome.wustl.edu	37	X	129190011	129190011	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	129190011	129190011	C	-	DEL	BCORL1	ENST00000303743	human	ensembl	74_37	+1	known	frame_shift_del	c.5258	p.P1755fs	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCORL1	HGNC	ENSG00000085185				118	1	0.840336	82	40	32.7869
MST4	0	genome.wustl.edu	37	X	131203605	131203605	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	131203605	131203605	A	-	DEL	MST4	ENST00000394334	human	ensembl	74_37	+1	known	frame_shift_del	c.697	p.N234fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MST4	Uniprot_gn	ENSG00000134602				54	0	0	26	8	23.5294
SPANXC	0	genome.wustl.edu	37	X	140335820	140335820	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	140335820	140335820	T	-	DEL	SPANXC	ENST00000358993	human	ensembl	74_37	-1	known	frame_shift_del	c.124	p.M42fs	0.004	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXC	HGNC	ENSG00000198573				200	0	0	132	14	9.58904
FLNA	0	genome.wustl.edu	37	X	153583264	153583264	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	153583264	153583264	G	-	DEL	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	frame_shift_del	c.5146	p.Q1716fs	0.969	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924				78	0	0	51	18	26.087
FAM47C	0	genome.wustl.edu	37	X	37028275	37028275	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	37028275	37028275	C	-	DEL	FAM47C	ENST00000358047	human	ensembl	74_37	+1	known	frame_shift_del	c.1792	p.E600fs	0.004	NULL	NULL	-	no_errors	FAM47C	HGNC	ENSG00000198173				177	0	0	106	25	19.084
RPGR	0	genome.wustl.edu	37	X	38144935	38144935	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	38144935	38144935	T	-	DEL	RPGR	ENST00000378505	human	ensembl	74_37	-1	known	frame_shift_del	c.3317	p.K1106fs	0.000	NULL	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313				320	0	0	193	64	24.9027
CCDC120	0	genome.wustl.edu	37	X	48925140	48925140	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	48925140	48925140	G	-	DEL	CCDC120	ENST00000603986	human	ensembl	74_37	+1	known	frame_shift_del	c.1490	p.E499fs	1.000	NULL	pfam_DUF3338	-	no_errors	CCDC120	HGNC	ENSG00000147144				78	0	0	29	9	23.6842
HUWE1	0	genome.wustl.edu	37	X	53658574	53658575	+	RNA	INS	-	-	A			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	53658574	53658575	-	A	INS	HUWE1	ENST00000471676	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	HUWE1	HGNC	ENSG00000086758				95	0	0	53	23	30.2632
FGD1	0	genome.wustl.edu	37	X	54497147	54497148	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	54497147	54497148	-	G	INS	FGD1	ENST00000375135	human	ensembl	74_37	-1	known	frame_shift_ins	c.528_527	p.L177fs	0.009:0.039	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD1	HGNC	ENSG00000102302				8	0	0	6	4	40
NLGN3	0	genome.wustl.edu	37	X	70387541	70387541	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HU-A4H3-01A-21D-A25D-08	TCGA-HU-A4H3-10A-01D-A25E-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4217ee3-8720-46c6-86c4-981ce6377fa9	1f68952d-2c49-4562-815b-bab0dc54415a	X	70387541	70387541	G	-	DEL	NLGN3	ENST00000358741	human	ensembl	74_37	+1	known	frame_shift_del	c.1594	p.V533fs	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN3	HGNC	ENSG00000196338				174	0	0	107	51	32.2785
