Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA13	0	genome.wustl.edu	37	7	48314178	48314178	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	7	48314178	48314178	T	A	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.4915	p.F1639I	0.683	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	161	0	0.00	118	32	21.19
ADAMTS3	0	genome.wustl.edu	37	4	73154516	73154516	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	73154516	73154516	C	T	SNP	ADAMTS3	ENST00000286657	human	ensembl	74_37	-1	known	missense	c.3001	p.G1001S	0.994	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS3	HGNC	ENSG00000156140	tier1	-	-	46	0	0.00	58	7	10.61
ADC	0	genome.wustl.edu	37	1	33585615	33585615	+	RNA	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	33585615	33585615	C	T	SNP	ADC	ENST00000475935	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADC	HGNC	ENSG00000142920	tier1	-	-	31	0	0.00	18	6	25.00
AGAP1	0	genome.wustl.edu	37	2	236659111	236659111	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	236659111	236659111	G	A	SNP	AGAP1	ENST00000304032	human	ensembl	74_37	+1	known	missense	c.652	p.V218M	1.000	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP1	HGNC	ENSG00000157985	tier1	-	-	162	0	0.00	102	36	26.09
ATP7A	0	genome.wustl.edu	37	X	77245413	77245413	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	77245413	77245413	G	A	SNP	ATP7A	ENST00000341514	human	ensembl	74_37	+1	known	missense	c.1295	p.R432K	1.000	pfam_HeavyMe-assoc_HMA,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,tigrfam_HMA_Cu_ion-bd	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_Cation_transp_P_typ_ATPase,prints_HG_scavenger,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7A	HGNC	ENSG00000165240	tier1	-	-	128	0	0.00	85	5	5.56
BICD1	0	genome.wustl.edu	37	12	32458846	32458846	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	32458846	32458846	C	T	SNP	BICD1	ENST00000281474	human	ensembl	74_37	+1	known	silent	c.795	p.I265	0.997	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc,superfamily_SPOC_like_C_dom	-	no_errors	BICD1	HGNC	ENSG00000151746	tier1	-	-	34	0	0.00	254	21	7.64
C10orf76	0	genome.wustl.edu	37	10	103793096	103793096	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	103793096	103793096	T	A	SNP	C10orf76	ENST00000370033	human	ensembl	74_37	-1	known	missense	c.103	p.T35S	1.000	NULL	pfam_DUF1741,superfamily_ARM-type_fold	-	no_errors	C10orf76	HGNC	ENSG00000120029	tier1	-	-	82	0	0.00	48	14	22.22
C12orf23	0	genome.wustl.edu	37	12	107360887	107360887	+	Splice_Site	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	107360887	107360887	A	T	SNP	C12orf23	ENST00000280756	human	ensembl	74_37	+1	known	splice_site	c.1-2	e1-2	0.983	-	-	-	no_errors	C12orf23	HGNC	ENSG00000151135	tier1	-	-	50	0	0.00	46	5	9.80
C17orf82	0	genome.wustl.edu	37	17	59489996	59489996	+	Silent	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	59489996	59489996	G	T	SNP	C17orf82	ENST00000335108	human	ensembl	74_37	+1	known	silent	c.660	p.G220	0.000	NULL	NULL	-	no_errors	C17orf82	HGNC	ENSG00000187013	tier1	-	-	10	0	0.00	11	5	31.25
C22orf29	0	genome.wustl.edu	37	22	19839008	19839008	+	Silent	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	22	19839008	19839008	C	A	SNP	C22orf29	ENST00000328554	human	ensembl	74_37	-1	known	silent	c.777	p.L259	0.000	NULL	NULL	-	no_errors	C22orf29	HGNC	ENSG00000215012				153	0	0.00	114	6	5.00
CAMK2G	0	genome.wustl.edu	37	10	75608870	75608870	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	75608870	75608870	C	T	SNP	CAMK2G	ENST00000423381	human	ensembl	74_37	-1	known	missense	c.418	p.E140K	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2G	HGNC	ENSG00000148660	tier1	-	-	69	0	0.00	108	22	16.92
CCDC47	0	genome.wustl.edu	37	17	61833661	61833661	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	61833661	61833661	G	A	SNP	CCDC47	ENST00000225726	human	ensembl	74_37	-1	known	missense	c.887	p.P296L	1.000	pfam_DUF1682	pfam_DUF1682	-	no_errors	CCDC47	HGNC	ENSG00000108588	tier1	rs146769873	-	82	0	0.00	70	33	32.04
CDH13	0	genome.wustl.edu	37	16	83065695	83065695	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	83065695	83065695	G	A	SNP	CDH13	ENST00000566620	human	ensembl	74_37	+1	known	missense	c.238	p.G80S	0.000	pfam_Cadherin_pro_dom,superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH13	HGNC	ENSG00000140945	tier1	-	-	20	0	0.00	12	6	33.33
CERCAM	0	genome.wustl.edu	37	9	131186792	131186792	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	131186792	131186792	G	A	SNP	CERCAM	ENST00000372838	human	ensembl	74_37	+1	known	missense	c.665	p.R222Q	1.000	NULL	pfam_Glyco_trans_25	-	no_errors	CERCAM	HGNC	ENSG00000167123	tier1	-	-	132	0	0.00	104	41	28.08
CHD6	0	genome.wustl.edu	37	20	40050378	40050378	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	40050378	40050378	A	G	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.4897	p.Y1633H	0.997	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177	tier1	-	-	51	0	0.00	70	12	14.63
CNOT7	0	genome.wustl.edu	37	8	17102642	17102642	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	8	17102642	17102642	T	C	SNP	CNOT7	ENST00000361272	human	ensembl	74_37	-1	known	missense	c.20	p.D7G	1.000	NULL	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	-	no_errors	CNOT7	HGNC	ENSG00000198791	tier1	-	-	59	0	0.00	31	10	24.39
CNTNAP4	0	genome.wustl.edu	37	16	76481974	76481974	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	76481974	76481974	A	G	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	missense	c.601	p.S201G	0.986	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	tier1	-	-	67	0	0.00	29	15	34.09
COL9A3	0	genome.wustl.edu	37	20	61460839	61460839	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	61460839	61460839	G	A	SNP	COL9A3	ENST00000343916	human	ensembl	74_37	+1	known	silent	c.1041	p.E347	1.000	NULL	pfam_Collagen	-	no_errors	COL9A3	HGNC	ENSG00000092758	tier1	-	-	67	0	0.00	57	12	17.39
COLEC12	0	genome.wustl.edu	37	18	346722	346722	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	18	346722	346722	G	A	SNP	COLEC12	ENST00000400256	human	ensembl	74_37	-1	known	silent	c.900	p.I300	1.000	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	COLEC12	HGNC	ENSG00000158270	tier1	-	-	83	0	0.00	69	66	48.89
CPXCR1	0	genome.wustl.edu	37	X	88008812	88008812	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	88008812	88008812	C	T	SNP	CPXCR1	ENST00000276127	human	ensembl	74_37	+1	known	nonsense	c.397	p.R133*	0.004	NULL	pfscan_Znf_C2H2	-	no_errors	CPXCR1	HGNC	ENSG00000147183	tier1	-	-	45	0	0.00	35	5	12.50
CSMD1	0	genome.wustl.edu	37	8	3611558	3611558	+	Silent	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	8	3611558	3611558	A	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	silent	c.825	p.T275	0.472	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	40	0	0.00	24	7	22.58
CUEDC1	0	genome.wustl.edu	37	17	55962641	55962641	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	55962641	55962641	G	A	SNP	CUEDC1	ENST00000360238	human	ensembl	74_37	-1	known	silent	c.285	p.S95	0.663	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	CUEDC1	HGNC	ENSG00000180891	tier1	-	-	109	0	0.00	80	28	25.69
DDX25	0	genome.wustl.edu	37	11	125780346	125780346	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	125780346	125780346	G	C	SNP	DDX25	ENST00000263576	human	ensembl	74_37	+1	known	missense	c.595	p.V199L	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX25	HGNC	ENSG00000109832	tier1	-	-	94	0	0.00	70	28	28.57
DDX39A	0	genome.wustl.edu	37	19	14521257	14521257	+	RNA	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	14521257	14521257	G	A	SNP	DDX39A	ENST00000592927	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.037	-	-	-	no_errors	DDX39A	HGNC	ENSG00000123136	tier1	-	-	15	0	0.00	13	5	26.32
DENND6A	0	genome.wustl.edu	37	3	57632109	57632109	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	3	57632109	57632109	C	A	SNP	DENND6A	ENST00000311128	human	ensembl	74_37	-1	known	missense	c.875	p.G292V	1.000	pfam_Afi1_N,pfam_DENN_dom	pfam_Afi1_N,pfam_ABL9/DENND6_dom,pfam_DENN_dom	-	no_errors	DENND6A	HGNC	ENSG00000174839	tier1	-	-	55	0	0.00	62	6	8.82
DEPDC1B	0	genome.wustl.edu	37	5	59940671	59940671	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	59940671	59940671	C	A	SNP	DEPDC1B	ENST00000265036	human	ensembl	74_37	-1	known	nonsense	c.610	p.E204*	1.000	pfscan_RhoGAP_dom	pfam_DEP_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_DEP_dom,pfscan_DEP_dom,pfscan_RhoGAP_dom	-	no_errors	DEPDC1B	HGNC	ENSG00000035499	tier1	-	-	44	0	0.00	30	11	26.83
DGCR14	0	genome.wustl.edu	37	22	19127524	19127524	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	22	19127524	19127524	C	G	SNP	DGCR14	ENST00000252137	human	ensembl	74_37	-1	known	missense	c.414	p.E138D	0.995	pfam_Nuclear_protein_DGCR14	pfam_Nuclear_protein_DGCR14	-	no_errors	DGCR14	HGNC	ENSG00000100056	tier1	-	-	168	0	0.00	67	38	36.19
DMXL1	0	genome.wustl.edu	37	5	118485816	118485816	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	118485816	118485816	T	A	SNP	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	missense	c.4294	p.L1432I	0.220	pfam_Rav1p_C	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869	tier1	-	-	86	0	0.00	30	23	43.40
DND1	0	genome.wustl.edu	37	5	140052285	140052285	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	140052285	140052285	T	-	DEL	DND1	ENST00000542735	human	ensembl	74_37	-1	known	frame_shift_del	c.349	p.T117fs	0.986	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DND1	HGNC	ENSG00000256453	tier1			19	0	0.00	19	5	20.83
DOCK11	0	genome.wustl.edu	37	X	117796708	117796708	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	117796708	117796708	G	T	SNP	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	nonsense	c.5029	p.G1677*	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	tier1	-	-	69	0	0.00	49	11	18.33
DPP8	0	genome.wustl.edu	37	15	65790304	65790304	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	15	65790304	65790304	A	T	SNP	DPP8	ENST00000341861	human	ensembl	74_37	-1	known	missense	c.661	p.C221S	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP8	HGNC	ENSG00000074603	tier1	-	-	101	0	0.00	81	23	22.12
DSG3	0	genome.wustl.edu	37	18	29055855	29055855	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	18	29055855	29055855	G	A	SNP	DSG3	ENST00000257189	human	ensembl	74_37	+1	known	missense	c.2632	p.G878S	0.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG3	HGNC	ENSG00000134757	tier1	-	-	125	0	0.00	140	10	6.67
E4F1	0	genome.wustl.edu	37	16	2282899	2282899	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	2282899	2282899	C	T	SNP	E4F1	ENST00000301727	human	ensembl	74_37	+1	known	silent	c.873	p.D291	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	E4F1	HGNC	ENSG00000167967	tier1	-	-	77	0	0.00	41	17	29.31
EHBP1	0	genome.wustl.edu	37	2	63182694	63182694	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	63182694	63182694	A	G	SNP	EHBP1	ENST00000263991	human	ensembl	74_37	+1	known	missense	c.2464	p.R822G	1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1	HGNC	ENSG00000115504	tier1	-	-	30	0	0.00	29	10	25.64
EHMT2	0	genome.wustl.edu	37	6	31864396	31864396	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	31864396	31864396	G	A	SNP	EHMT2	ENST00000395728	human	ensembl	74_37	-1	known	silent	c.486	p.G162	0.505	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT2	HGNC	ENSG00000204371	tier1	-	-	167	0	0.00	248	65	20.77
ENSG00000236986	0	genome.wustl.edu	37	9	134008392	134008392	+	RNA	DEL	T	T	-			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	134008392	134008392	T	-	DEL	ENSG00000236986	ENST00000587264	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-544A12.4	Clone_based_vega_gene	ENSG00000236986	tier1			23	0	0.00	23	2	8.00
ENSG00000271936	0	genome.wustl.edu	37	2	25049001	25049001	+	RNA	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	25049001	25049001	G	C	SNP	ENSG00000271936	ENST00000606114	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	RP11-443B20.1	Clone_based_vega_gene	ENSG00000271936	tier1	-	-	53	0	0.00	33	12	26.67
ENSG00000272056	0	genome.wustl.edu	37	2	27276504	27276505	+	RNA	INS	-	-	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	27276504	27276505	-	T	INS	ENSG00000272056	ENST00000607407	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-503P10.1	Clone_based_vega_gene	ENSG00000272056	tier1			26	0	0.00	26	3	10.34
FAM114A1	0	genome.wustl.edu	37	4	38916636	38916636	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	38916636	38916636	A	T	SNP	FAM114A1	ENST00000358869	human	ensembl	74_37	+1	known	missense	c.887	p.Y296F	1.000	pfam_DUF719	pfam_DUF719	-	no_errors	FAM114A1	HGNC	ENSG00000197712	tier1	-	-	75	0	0.00	70	5	6.67
FAM122C	0	genome.wustl.edu	37	X	133988303	133988303	+	RNA	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	133988303	133988303	G	C	SNP	FAM122C	ENST00000463842	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM122C	HGNC	ENSG00000156500	tier1	-	-	10	0	0.00	7	5	41.67
FAM151A	0	genome.wustl.edu	37	1	55075100	55075100	+	Silent	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	55075100	55075100	G	T	SNP	FAM151A	ENST00000302250	human	ensembl	74_37	-1	known	silent	c.1599	p.P533	0.559	pfam_DUF2181	pfam_DUF2181	-	no_errors	FAM151A	HGNC	ENSG00000162391	tier1	-	-	120	0	0.00	86	36	29.51
FAM182B	0	genome.wustl.edu	37	20	25848617	25848617	+	RNA	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	25848617	25848617	A	G	SNP	FAM182B	ENST00000424021	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	FAM182B	HGNC	ENSG00000175170	tier1	-	-	19	0	0.00	6	3	33.33
FAM209B	0	genome.wustl.edu	37	20	55108405	55108405	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	55108405	55108405	C	T	SNP	FAM209B	ENST00000371325	human	ensembl	74_37	+1	known	missense	c.8	p.T3M	0.256	NULL	NULL	-	no_errors	FAM209B	HGNC	ENSG00000213714	tier1	-	-	173	0	0.00	120	48	28.57
FCHSD2	0	genome.wustl.edu	37	11	72554209	72554209	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	72554209	72554209	G	A	SNP	FCHSD2	ENST00000409418	human	ensembl	74_37	-1	known	silent	c.1692	p.N564	0.990	NULL	pfam_SH3_domain,pfam_FCH_dom,pfam_SH3_2,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	FCHSD2	HGNC	ENSG00000137478	tier1	-	-	42	0	0.00	28	8	22.22
FLNB	0	genome.wustl.edu	37	3	58139200	58139200	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	3	58139200	58139200	C	T	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.6466	p.R2156W	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068	tier1	-	-	110	0	0.00	98	34	25.76
GBP3	0	genome.wustl.edu	37	1	89486355	89486355	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	89486355	89486355	G	C	SNP	GBP3	ENST00000370481	human	ensembl	74_37	-1	known	missense	c.50	p.T17S	0.005	superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP3	HGNC	ENSG00000117226	tier1	-	-	121	0	0.00	97	34	25.95
GDF15	0	genome.wustl.edu	37	19	18499410	18499410	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	18499410	18499410	C	G	SNP	GDF15	ENST00000252809	human	ensembl	74_37	+1	known	missense	c.592	p.R198G	0.356	NULL	pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	GDF15	HGNC	ENSG00000130513	tier1	-	-	28	0	0.00	22	7	24.14
GFPT1	0	genome.wustl.edu	37	2	69565670	69565670	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	69565670	69565670	C	G	SNP	GFPT1	ENST00000357308	human	ensembl	74_37	-1	known	missense	c.1231	p.E411Q	1.000	pfam_SIS,tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT1	HGNC	ENSG00000198380	tier1	-	-	75	0	0.00	66	7	9.59
GHR	0	genome.wustl.edu	37	5	42718570	42718570	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	42718570	42718570	G	A	SNP	GHR	ENST00000230882	human	ensembl	74_37	+1	known	missense	c.961	p.E321K	1.000	NULL	pfam_Growth/epo_recpt_lig-bind,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	GHR	HGNC	ENSG00000112964	tier1	-	-	213	0	0.00	185	15	7.50
GORASP2	0	genome.wustl.edu	37	2	171806765	171806765	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	171806765	171806765	G	A	SNP	GORASP2	ENST00000452526	human	ensembl	74_37	+1	known	missense	c.436	p.D146N	1.000	pfam_GRASP55/65_PDZ,superfamily_PDZ	pfam_GRASP55/65_PDZ,superfamily_PDZ	-	no_errors	GORASP2	HGNC	ENSG00000115806	tier1	-	-	61	0	0.00	74	17	18.48
HCCS	0	genome.wustl.edu	37	X	11135397	11135397	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	11135397	11135397	C	A	SNP	HCCS	ENST00000321143	human	ensembl	74_37	+1	known	missense	c.263	p.P88Q	1.000	pfam_Cyt_C/C1_haem_lyase	pfam_Cyt_C/C1_haem_lyase	-	no_errors	HCCS	HGNC	ENSG00000004961	tier1	-	-	157	0	0.00	109	36	24.83
HEXDC	0	genome.wustl.edu	37	17	80399097	80399097	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	80399097	80399097	G	A	SNP	HEXDC	ENST00000337014	human	ensembl	74_37	+1	known	missense	c.1207	p.A403T	1.000	NULL	pfam_Glyco_hydro_20_cat-core,superfamily_Glycoside_hydrolase_SF	-	no_errors	HEXDC	HGNC	ENSG00000169660	tier1	-	-	156	0	0.00	104	35	25.00
HEYL	0	genome.wustl.edu	37	1	40092770	40092770	+	Silent	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	40092770	40092770	C	A	SNP	HEYL	ENST00000372852	human	ensembl	74_37	-1	known	silent	c.396	p.L132	1.000	pfam_Orange,smart_Orange_subgr,pfscan_Orange	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	HEYL	HGNC	ENSG00000163909	tier1	-	-	89	0	0.00	65	18	21.69
HHIPL2	0	genome.wustl.edu	37	1	222717244	222717244	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	222717244	222717244	G	A	SNP	HHIPL2	ENST00000343410	human	ensembl	74_37	-1	known	silent	c.609	p.G203	1.000	pfam_Folate_rcpt-like	pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Quinoprot_gluc/sorb_DH,superfamily_Saposin-like	-	no_errors	HHIPL2	HGNC	ENSG00000143512	tier1	-	-	81	0	0.00	49	21	30.00
IFNB1	0	genome.wustl.edu	37	9	21077518	21077518	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	21077518	21077518	G	A	SNP	IFNB1	ENST00000380232	human	ensembl	74_37	-1	known	silent	c.351	p.N117	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNB1	HGNC	ENSG00000171855	tier1	-	-	190	0	0.00	129	58	31.02
IL17RD	0	genome.wustl.edu	37	3	57148762	57148762	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	3	57148762	57148762	C	T	SNP	IL17RD	ENST00000296318	human	ensembl	74_37	-1	known	missense	c.268	p.D90N	1.000	NULL	pfam_SEFIR,superfamily_TIR_dom	-	no_errors	IL17RD	HGNC	ENSG00000144730	tier1	-	-	41	0	0.00	33	4	10.81
IRF6	0	genome.wustl.edu	37	1	209961959	209961959	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	209961959	209961959	C	T	SNP	IRF6	ENST00000367021	human	ensembl	74_37	-1	known	missense	c.1210	p.E404K	0.999	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF6	HGNC	ENSG00000117595	tier1	-	-	61	0	0.00	34	19	35.85
KMT2D	0	genome.wustl.edu	37	12	49427330	49427330	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	49427330	49427330	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	nonsense	c.11158	p.Q3720*	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				63	0	0.00	81	14	14.74
L3MBTL1	0	genome.wustl.edu	37	20	42143771	42143771	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	42143771	42143771	G	A	SNP	L3MBTL1	ENST00000418998	human	ensembl	74_37	+1	known	missense	c.559	p.D187N	0.007	NULL	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513	tier1	-	-	144	0	0.00	122	11	8.27
LAMC1	0	genome.wustl.edu	37	1	183085791	183085791	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	183085791	183085791	G	A	SNP	LAMC1	ENST00000258341	human	ensembl	74_37	+1	known	missense	c.1408	p.E470K	1.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Laminin_N,pfam_EGF_laminin,pfam_Laminin_B_type_IV,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC1	HGNC	ENSG00000135862	tier1	-	-	114	0	0.00	89	7	7.29
LARP4B	0	genome.wustl.edu	37	10	860754	860754	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	860754	860754	G	C	SNP	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	missense	c.1857	p.H619Q	0.072	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				17	0	0.00	20	4	16.67
LOC283693	0	genome.wustl.edu	37	15	83395038	83395038	+	RNA	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	15	83395038	83395038	A	T	SNP	LOC283693	ENST00000560958	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.222	-	-	-	no_errors	RP11-752G15.9	Clone_based_vega_gene	ENSG00000259315	tier1	-	-	15	0	0.00	8	7	46.67
MAGEC1	0	genome.wustl.edu	37	X	140996082	140996082	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	140996082	140996082	C	T	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	silent	c.2892	p.S964	0.001	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	245	0	0.00	222	12	5.13
MARCH1	0	genome.wustl.edu	37	4	164534501	164534501	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	164534501	164534501	C	G	SNP	MARCH1	ENST00000274056	human	ensembl	74_37	-1	known	missense	c.207	p.R69S	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH1	HGNC	ENSG00000145416	tier1	-	-	98	0	0.00	55	27	32.93
MATR3	0	genome.wustl.edu	37	5	138661124	138661124	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	138661124	138661124	T	A	SNP	MATR3	ENST00000394800	human	ensembl	74_37	+1	novel	missense	c.2288	p.I763N	1.000	NULL	smart_Znf_U1,smart_RRM_dom,pfscan_Znf_C2H2_matrin,pfscan_RRM_dom	-	no_errors	MATR3	HGNC	ENSG00000015479				52	0	0.00	34	8	18.60
MDN1	0	genome.wustl.edu	37	6	90494814	90494814	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	90494814	90494814	G	A	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.1366	p.P456S	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1	-	-	206	0	0.00	124	15	10.79
MED23	0	genome.wustl.edu	37	6	131917212	131917212	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	131917212	131917212	C	A	SNP	MED23	ENST00000368058	human	ensembl	74_37	-1	known	missense	c.2888	p.G963V	1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282	tier1	-	-	128	0	0.00	115	18	13.53
METTL9	0	genome.wustl.edu	37	16	21624099	21624099	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	21624099	21624099	A	G	SNP	METTL9	ENST00000358154	human	ensembl	74_37	+1	known	missense	c.299	p.Y100C	1.000	pfam_DREV_MeTrfase	pfam_DREV_MeTrfase,pfam_Methyltransf_12,pfam_Methyltransf_11	-	no_errors	METTL9	HGNC	ENSG00000197006	tier1	-	-	67	0	0.00	54	24	30.77
MIIP	0	genome.wustl.edu	37	1	12089071	12089071	+	RNA	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	12089071	12089071	G	A	SNP	MIIP	ENST00000492256	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIIP	HGNC	ENSG00000116691	tier1	-	-	57	0	0.00	58	30	34.09
MORN5	0	genome.wustl.edu	37	9	124929060	124929060	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	124929060	124929060	G	A	SNP	MORN5	ENST00000536616	human	ensembl	74_37	+1	known	missense	c.61	p.A21T	0.620	pfam_MORN,smart_MORN	pfam_MORN,smart_MORN	-	no_errors	MORN5	HGNC	ENSG00000185681				23	0	0.00	29	4	12.12
MOV10L1	0	genome.wustl.edu	37	22	50553554	50553554	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	22	50553554	50553554	T	A	SNP	MOV10L1	ENST00000262794	human	ensembl	74_37	+1	known	missense	c.1138	p.C380S	0.000	NULL	superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold	-	no_errors	MOV10L1	HGNC	ENSG00000073146	tier1	-	-	120	0	0.00	43	37	46.25
MUC16	0	genome.wustl.edu	37	19	9046510	9046510	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	9046510	9046510	A	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.35121	p.S11707R	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	149	0	0.00	128	8	5.88
MUC6	0	genome.wustl.edu	37	11	1016179	1016179	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	1016179	1016179	T	A	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	missense	c.6622	p.I2208F	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1	-	-	43	0	0.00	18	9	33.33
MYH4	0	genome.wustl.edu	37	17	10367836	10367836	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	10367836	10367836	C	A	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.601	p.V201F	0.983	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	tier1	-	-	50	0	0.00	50	17	25.37
MYO15A	0	genome.wustl.edu	37	17	18051478	18051478	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	18051478	18051478	G	A	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	silent	c.6645	p.A2215	0.844	pfam_MyTH4_dom,smart_MyTH4_dom,pfscan_MyTH4_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536	tier1	-	-	103	0	0.00	98	94	48.96
MYO5A	0	genome.wustl.edu	37	15	52689432	52689432	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	15	52689432	52689432	G	T	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	missense	c.1285	p.Q429K	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535	tier1	-	-	76	0	0.00	57	29	33.72
NBPF1	0	genome.wustl.edu	37	1	16909134	16909134	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	16909134	16909134	G	A	SNP	NBPF1	ENST00000430580	human	ensembl	74_37	-1	novel	missense	c.1211	p.P404L	0.001	NULL	pfam_NBPF_dom	-	no_errors	NBPF1	HGNC	ENSG00000219481	tier1	rs201581469	-	57	0	0.00	37	4	9.76
NBPF10	0	genome.wustl.edu	37	1	145303942	145303942	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	145303942	145303942	G	A	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.1339	p.V447I	0.003	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386	tier1	-	-	263	0	0.00	218	52	19.26
NCSTN	0	genome.wustl.edu	37	1	160328098	160328098	+	RNA	SNP	A	A	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	160328098	160328098	A	C	SNP	NCSTN	ENST00000469159	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NCSTN	HGNC	ENSG00000162736	tier1	-	-	61	0	0.00	50	16	24.24
NES	0	genome.wustl.edu	37	1	156641841	156641841	+	Silent	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	156641841	156641841	A	T	SNP	NES	ENST00000368223	human	ensembl	74_37	-1	known	silent	c.2139	p.S713	0.000	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688	tier1	-	-	81	0	0.00	68	34	33.33
NKAP	0	genome.wustl.edu	37	X	119064118	119064118	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	119064118	119064118	C	A	SNP	NKAP	ENST00000371410	human	ensembl	74_37	-1	known	missense	c.934	p.A312S	1.000	pfam_DUF926	pfam_DUF926	-	no_errors	NKAP	HGNC	ENSG00000101882	tier1	-	-	128	0	0.00	68	25	26.88
NRXN1	0	genome.wustl.edu	37	2	51254965	51254965	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	51254965	51254965	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.447	p.V149	0.994	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	59	0	0.00	35	16	31.37
OGG1	0	genome.wustl.edu	37	3	9798575	9798575	+	RNA	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	3	9798575	9798575	C	G	SNP	OGG1	ENST00000383825	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.312	-	-	-	no_errors	OGG1	HGNC	ENSG00000114026	tier1	-	-	66	0	0.00	47	23	32.86
OR52B6	0	genome.wustl.edu	37	11	5603050	5603050	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	5603050	5603050	G	A	SNP	OR52B6	ENST00000345043	human	ensembl	74_37	+1	known	missense	c.944	p.R315K	0.859	prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52B6	HGNC	ENSG00000187747	tier1	-	-	143	0	0.00	81	12	12.90
OR5D13	0	genome.wustl.edu	37	11	55540935	55540935	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	55540935	55540935	C	A	SNP	OR5D13	ENST00000361760	human	ensembl	74_37	+1	known	missense	c.22	p.Q8K	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D13	HGNC	ENSG00000198877	tier1	-	-	160	0	0.00	107	27	20.15
OR8U1	0	genome.wustl.edu	37	11	56143410	56143410	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	56143410	56143410	T	G	SNP	OR8U1	ENST00000302270	human	ensembl	74_37	+1	known	missense	c.311	p.F104C	0.086	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8U1	HGNC	ENSG00000172199	tier1	-	-	161	0	0.00	93	48	34.04
P4HB	0	genome.wustl.edu	37	17	79813048	79813048	+	Silent	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	79813048	79813048	G	C	SNP	P4HB	ENST00000331483	human	ensembl	74_37	-1	known	silent	c.594	p.L198	0.025	superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	P4HB	HGNC	ENSG00000185624	tier1	-	-	332	0	0.00	244	87	26.28
PACSIN3	0	genome.wustl.edu	37	11	47202174	47202174	+	Silent	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	47202174	47202174	C	G	SNP	PACSIN3	ENST00000298838	human	ensembl	74_37	-1	known	silent	c.279	p.A93	0.666	pfam_FCH_dom,smart_FCH_dom	pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PACSIN3	HGNC	ENSG00000165912	tier1	-	-	71	0	0.00	63	27	29.67
PARP11	0	genome.wustl.edu	37	12	3921167	3921167	+	RNA	DEL	T	T	-			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	3921167	3921167	T	-	DEL	PARP11	ENST00000476985	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.952	-	-	-	no_errors	PARP11	HGNC	ENSG00000111224	tier1			8	0	0.00	2	3	60.00
PCDH9	0	genome.wustl.edu	37	13	67801360	67801360	+	Silent	SNP	T	T	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	13	67801360	67801360	T	G	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	silent	c.1213	p.R405	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226	tier1	-	-	112	0	0.00	62	25	28.74
PDZRN4	0	genome.wustl.edu	37	12	41967633	41967633	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	41967633	41967633	G	T	SNP	PDZRN4	ENST00000402685	human	ensembl	74_37	+1	known	missense	c.3052	p.A1018S	1.000	NULL	pfam_PDZ,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	PDZRN4	HGNC	ENSG00000165966	tier1	-	-	57	0	0.00	72	7	8.86
PHF12	0	genome.wustl.edu	37	17	27237293	27237293	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	27237293	27237293	C	T	SNP	PHF12	ENST00000332830	human	ensembl	74_37	-1	known	silent	c.2310	p.P770	0.082	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_SMAD_FHA_domain,smart_Znf_PHD,pfscan_FHA_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF12	HGNC	ENSG00000109118	tier1	-	-	100	0	0.00	79	31	28.18
PIK3C2A	0	genome.wustl.edu	37	11	17170212	17170212	+	Splice_Site	SNP	A	A	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	17170212	17170212	A	C	SNP	PIK3C2A	ENST00000265970	human	ensembl	74_37	-1	known	splice_site	c.1448+2	e4+2	1.000	-	-	-	no_errors	PIK3C2A	HGNC	ENSG00000011405	tier1	-	-	32	0	0.00	31	14	31.11
PLP2	0	genome.wustl.edu	37	X	49029916	49029916	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	49029916	49029916	T	C	SNP	PLP2	ENST00000376322	human	ensembl	74_37	+1	known	missense	c.431	p.I144T	0.002	NULL	pfam_Marvel	-	no_errors	PLP2	HGNC	ENSG00000102007	tier1	-	-	22	0	0.00	15	4	21.05
PRDM9	0	genome.wustl.edu	37	5	23521169	23521169	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	23521169	23521169	T	A	SNP	PRDM9	ENST00000296682	human	ensembl	74_37	+1	known	nonsense	c.389	p.L130*	0.001	NULL	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256	tier1	-	-	69	0	0.00	37	17	31.48
PRKD3	0	genome.wustl.edu	37	2	37509738	37509738	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	37509738	37509738	C	T	SNP	PRKD3	ENST00000234179	human	ensembl	74_37	-1	known	missense	c.935	p.R312H	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_DAG/PE-bd	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD3	HGNC	ENSG00000115825	tier1	-	-	90	0	0.00	86	6	6.52
PRRC2A	0	genome.wustl.edu	37	6	31604290	31604290	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	31604290	31604290	C	T	SNP	PRRC2A	ENST00000376007	human	ensembl	74_37	+1	known	missense	c.5839	p.R1947C	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469	tier1	-	-	195	0	0.00	293	51	14.78
PTEN	0	genome.wustl.edu	37	10	89711882	89711882	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	89711882	89711882	C	G	SNP	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	missense	c.500	p.T167S	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	tier1	-	-	113	0	0.00	91	18	16.36
PTPN11	0	genome.wustl.edu	37	12	112892407	112892407	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	112892407	112892407	T	G	SNP	PTPN11	ENST00000351677	human	ensembl	74_37	+1	known	missense	c.565	p.S189A	1.000	pfam_SH2,smart_SH2,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,prints_SH2	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_SH2,smart_SH2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_SH2	-	no_errors	PTPN11	HGNC	ENSG00000179295	tier1	rs79068130	-	57	0	0.00	53	4	7.02
PTPN11	0	genome.wustl.edu	37	12	112892433	112892433	+	Nonsense_Mutation	SNP	T	T	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	112892433	112892433	T	G	SNP	PTPN11	ENST00000351677	human	ensembl	74_37	+1	known	nonsense	c.591	p.Y197*	1.000	pfam_SH2,smart_SH2,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,prints_SH2	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_SH2,smart_SH2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_SH2	-	no_errors	PTPN11	HGNC	ENSG00000179295	tier1	rs76982592	-	52	0	0.00	55	6	9.84
PTPN11	0	genome.wustl.edu	37	12	112892458	112892458	+	Silent	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	112892458	112892458	T	C	SNP	PTPN11	ENST00000351677	human	ensembl	74_37	+1	known	silent	c.616	p.L206	0.000	pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_SH2,smart_SH2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_SH2	-	no_errors	PTPN11	HGNC	ENSG00000179295				48	0	0.00	48	5	9.43
PZP	0	genome.wustl.edu	37	12	9302161	9302161	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	9302161	9302161	G	C	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	missense	c.4422	p.S1474R	0.929	superfamily_A-macroglobulin_rcpt-bd	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838	tier1	-	-	125	0	0.00	49	27	35.53
RP1L1	0	genome.wustl.edu	37	8	10465195	10465195	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	8	10465195	10465195	T	C	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.6413	p.E2138G	0.001	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	410	0	0.00	333	130	28.02
S1PR5	0	genome.wustl.edu	37	19	10624657	10624657	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	10624657	10624657	G	A	SNP	S1PR5	ENST00000333430	human	ensembl	74_37	-1	known	missense	c.1031	p.A344V	0.203	prints_EDG8_S1P_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_EDG8_S1P_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn	-	no_errors	S1PR5	HGNC	ENSG00000180739	tier1	-	-	31	0	0.00	16	10	38.46
SACS	0	genome.wustl.edu	37	13	23906217	23906217	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	13	23906217	23906217	C	G	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.11798	p.R3933T	0.999	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	131	0	0.00	101	31	23.48
SALL1	0	genome.wustl.edu	37	16	51174367	51174367	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	51174367	51174367	C	T	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	missense	c.1766	p.G589D	0.267	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449	tier1	-	-	80	0	0.00	25	18	41.86
SEC24C	0	genome.wustl.edu	37	10	75520604	75520604	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	75520604	75520604	C	T	SNP	SEC24C	ENST00000339365	human	ensembl	74_37	+1	known	silent	c.984	p.S328	0.996	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24C	HGNC	ENSG00000176986	tier1	-	-	139	0	0.00	91	70	43.48
SELPLG	0	genome.wustl.edu	37	12	109017037	109017037	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	109017037	109017037	G	A	SNP	SELPLG	ENST00000550948	human	ensembl	74_37	-1	known	silent	c.1047	p.G349	0.837	NULL	NULL	-	no_errors	SELPLG	HGNC	ENSG00000110876	tier1	-	-	56	0	0.00	52	22	29.73
SLC16A11	0	genome.wustl.edu	37	17	6946019	6946019	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	6946019	6946019	C	T	SNP	SLC16A11	ENST00000308009	human	ensembl	74_37	-1	known	missense	c.482	p.R161H	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A11	HGNC	ENSG00000174326	tier1	-	-	8	0	0.00	4	7	63.64
SLIT2	0	genome.wustl.edu	37	4	20525447	20525447	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	20525447	20525447	A	C	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.1195	p.N399H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	-	-	120	0	0.00	90	27	23.08
SLIT2	0	genome.wustl.edu	37	4	20525485	20525485	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	20525485	20525485	C	T	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	silent	c.1233	p.I411	0.923	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	rs145340436	-	136	0	0.00	113	42	27.10
SMCHD1	0	genome.wustl.edu	37	18	2728671	2728671	+	RNA	SNP	A	A	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	18	2728671	2728671	A	C	SNP	SMCHD1	ENST00000609587	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SMCHD1	HGNC	ENSG00000101596	tier1	-	-	32	0	0.00	32	12	27.27
SPATA17	0	genome.wustl.edu	37	1	217824481	217824481	+	Silent	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	217824481	217824481	A	G	SNP	SPATA17	ENST00000366933	human	ensembl	74_37	+1	known	silent	c.201	p.R67	1.000	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SPATA17	HGNC	ENSG00000162814	tier1	-	-	76	0	0.00	73	15	16.85
SPATA31A6	0	genome.wustl.edu	37	9	43627261	43627261	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	43627261	43627261	G	T	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.1426	p.Q476K	0.003	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775	tier1	-	-	502	0	0.00	358	94	20.70
SPPL2C	0	genome.wustl.edu	37	17	43924067	43924067	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	43924067	43924067	G	A	SNP	SPPL2C	ENST00000329196	human	ensembl	74_37	+1	known	missense	c.1795	p.D599N	0.390	NULL	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2C	HGNC	ENSG00000185294	tier1	-	-	147	0	0.00	94	36	27.69
SREBF2	0	genome.wustl.edu	37	22	42290837	42290837	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	22	42290837	42290837	G	A	SNP	SREBF2	ENST00000361204	human	ensembl	74_37	+1	known	silent	c.2391	p.A797	0.627	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SREBF2	HGNC	ENSG00000198911	tier1	-	-	218	0	0.00	170	9	5.00
ST3GAL1	0	genome.wustl.edu	37	8	134488026	134488026	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	8	134488026	134488026	G	T	SNP	ST3GAL1	ENST00000319914	human	ensembl	74_37	-1	known	missense	c.242	p.T81N	0.998	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL1	HGNC	ENSG00000008513	tier1	-	-	36	0	0.00	27	14	34.15
STAG1	0	genome.wustl.edu	37	3	136096564	136096564	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	3	136096564	136096564	T	C	SNP	STAG1	ENST00000383202	human	ensembl	74_37	-1	known	missense	c.2308	p.K770E	1.000	superfamily_ARM-type_fold	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG1	HGNC	ENSG00000118007	tier1	-	-	83	0	0.00	66	25	27.47
STX12	0	genome.wustl.edu	37	1	28146221	28146222	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	28146221	28146222	-	A	INS	STX12	ENST00000373943	human	ensembl	74_37	+1	known	frame_shift_ins	c.710_711	p.Q238fs	1.000:0.997	pfam_T_SNARE_dom,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX12	HGNC	ENSG00000117758	tier1			41	0	0.00	31	15	32.61
SVEP1	0	genome.wustl.edu	37	9	113168658	113168658	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	113168658	113168658	G	C	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.9222	p.F3074L	0.337	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124	tier1	-	-	133	0	0.00	122	40	24.69
TBC1D29	0	genome.wustl.edu	37	17	28890301	28890301	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	28890301	28890301	G	A	SNP	TBC1D29	ENST00000579181	human	ensembl	74_37	+1	known	missense	c.311	p.S104N	0.904	NULL	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D29	HGNC	ENSG00000266733	tier1	rs80145926	-	35	0	0.00	38	8	17.39
TBR1	0	genome.wustl.edu	37	2	162280269	162280269	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	162280269	162280269	A	-	DEL	TBR1	ENST00000389554	human	ensembl	74_37	+1	known	frame_shift_del	c.1580	p.Q527fs	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBR1	HGNC	ENSG00000136535	tier1			9	0	0.00	4	2	33.33
TCEA3	0	genome.wustl.edu	37	1	23724340	23724340	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	23724340	23724340	C	T	SNP	TCEA3	ENST00000450454	human	ensembl	74_37	-1	known	silent	c.552	p.G184	0.997	pfam_TFIIS_cen_dom,superfamily_TFIIS_cen_dom,pirsf_TF_IIS-rel,tigrfam_TFSII	pfam_TFIIS_cen_dom,pfam_Znf_TFIIS,pfam_TFIIS_N,superfamily_TFIIS_cen_dom,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_TFS2M,smart_Znf_TFIIS,pirsf_TF_IIS-rel,pfscan_Znf_TFIIS,tigrfam_TFSII	-	no_errors	TCEA3	HGNC	ENSG00000204219	tier1	-	-	81	0	0.00	58	23	28.40
TEX19	0	genome.wustl.edu	37	17	80320393	80320393	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	80320393	80320393	G	A	SNP	TEX19	ENST00000333437	human	ensembl	74_37	+1	known	missense	c.367	p.E123K	0.999	NULL	NULL	-	no_errors	TEX19	HGNC	ENSG00000182459	tier1	-	-	207	0	0.00	209	57	21.43
TOMM40L	0	genome.wustl.edu	37	1	161199442	161199442	+	RNA	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	161199442	161199442	G	A	SNP	TOMM40L	ENST00000474486	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.927	-	-	-	no_errors	TOMM40L	HGNC	ENSG00000158882	tier1	-	-	40	0	0.00	42	4	8.70
TPH2	0	genome.wustl.edu	37	12	72416245	72416245	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	72416245	72416245	G	T	SNP	TPH2	ENST00000333850	human	ensembl	74_37	+1	known	nonsense	c.1135	p.G379*	1.000	pfam_Aromatic-AA_hydroxylase_C,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Trp_5_mOase	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Trp_5_mOase	-	no_errors	TPH2	HGNC	ENSG00000139287	tier1	-	-	76	0	0.00	162	40	19.80
TPSAB1	0	genome.wustl.edu	37	16	1292145	1292145	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	1292145	1292145	G	C	SNP	TPSAB1	ENST00000338844	human	ensembl	74_37	+1	known	missense	c.732	p.W244C	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TPSAB1	HGNC	ENSG00000172236	tier1	-	-	47	0	0.00	46	11	19.30
TPTE	0	genome.wustl.edu	37	21	10934988	10934988	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	21	10934988	10934988	G	A	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	missense	c.805	p.R269W	0.914	pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157	tier1	rs141045272	-	120	0	0.00	108	20	15.62
TRAF3IP3	0	genome.wustl.edu	37	1	209955414	209955414	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	209955414	209955414	G	A	SNP	TRAF3IP3	ENST00000367024	human	ensembl	74_37	+1	known	missense	c.1577	p.R526Q	0.004	NULL	NULL	-	no_errors	TRAF3IP3	HGNC	ENSG00000009790	tier1	-	-	95	0	0.00	83	13	13.40
TRIM49	0	genome.wustl.edu	37	11	89531652	89531652	+	Silent	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	89531652	89531652	A	T	SNP	TRIM49	ENST00000329758	human	ensembl	74_37	-1	known	silent	c.1005	p.T335	0.505	superfamily_ConA-like_lec_gl_sf,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM49	HGNC	ENSG00000168930	tier1	-	-	62	0	0.00	33	17	34.00
TRPC4	0	genome.wustl.edu	37	13	38357279	38357279	+	Silent	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	13	38357279	38357279	A	G	SNP	TRPC4	ENST00000379681	human	ensembl	74_37	-1	known	silent	c.192	p.N64	0.998	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC4_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC4	HGNC	ENSG00000133107	tier1	-	-	111	0	0.00	79	26	24.76
TTC37	0	genome.wustl.edu	37	5	94852652	94852652	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	94852652	94852652	C	T	SNP	TTC37	ENST00000358746	human	ensembl	74_37	-1	known	missense	c.2404	p.D802N	0.984	pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC37	HGNC	ENSG00000198677	tier1	-	-	22	0	0.00	15	9	37.50
TTLL7	0	genome.wustl.edu	37	1	84386949	84386949	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	84386949	84386949	T	G	SNP	TTLL7	ENST00000260505	human	ensembl	74_37	-1	known	missense	c.1271	p.E424A	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL7	HGNC	ENSG00000137941	tier1	-	-	75	0	0.00	68	13	16.05
TUBE1	0	genome.wustl.edu	37	6	112392631	112392631	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	112392631	112392631	A	G	SNP	TUBE1	ENST00000368662	human	ensembl	74_37	-1	known	missense	c.1412	p.L471P	0.999	NULL	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Epsilon_tubulin,prints_Tubulin	-	no_errors	TUBE1	HGNC	ENSG00000074935	tier1	-	-	151	0	0.00	118	59	33.33
UBQLNL	0	genome.wustl.edu	37	11	5537060	5537060	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	5537060	5537060	C	G	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	missense	c.612	p.L204F	1.000	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518	tier1	-	-	191	0	0.00	125	15	10.71
UHRF1	0	genome.wustl.edu	37	19	4954800	4954800	+	RNA	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	4954800	4954800	G	A	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	tier1	-	-	113	0	0.00	75	25	25.00
UTRN	0	genome.wustl.edu	37	6	145075901	145075901	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	145075901	145075901	G	C	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	missense	c.8401	p.D2801H	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818	tier1	-	-	88	0	0.00	66	14	17.50
VBP1	0	genome.wustl.edu	37	X	154467130	154467130	+	RNA	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	154467130	154467130	C	G	SNP	VBP1	ENST00000459836	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	VBP1	HGNC	ENSG00000155959	tier1	-	-	160	0	0.00	111	36	24.32
ZKSCAN1	0	genome.wustl.edu	37	7	99621085	99621085	+	Splice_Site	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	7	99621085	99621085	G	C	SNP	ZKSCAN1	ENST00000426572	human	ensembl	74_37	+1	putative	splice_site	c.1+1	e0+1	0.001	-	-	-	no_errors	ZKSCAN1	HGNC	ENSG00000106261	tier1	-	-	87	0	0.00	61	12	16.44
ZNF321P	0	genome.wustl.edu	37	19	53432662	53432662	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	53432662	53432662	A	T	SNP	ZNF321P	ENST00000391777	human	ensembl	74_37	-1	known	missense	c.196	p.S66T	0.295	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF321P	HGNC	ENSG00000221874	tier1	-	-	107	0	0.00	85	29	25.44
ZNF33A	0	genome.wustl.edu	37	10	38343351	38343351	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	38343351	38343351	C	G	SNP	ZNF33A	ENST00000432900	human	ensembl	74_37	+1	known	missense	c.317	p.S106C	0.926	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180	tier1	-	-	84	0	0.00	65	6	8.45
ZNF417	0	genome.wustl.edu	37	19	58420923	58420923	+	Silent	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	58420923	58420923	C	G	SNP	ZNF417	ENST00000312026	human	ensembl	74_37	-1	known	silent	c.723	p.V241	0.007	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF417	HGNC	ENSG00000173480	tier1	-	-	67	0	0.00	44	13	22.81
ZNF419	0	genome.wustl.edu	37	19	58005073	58005073	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	58005073	58005073	G	T	SNP	ZNF419	ENST00000424930	human	ensembl	74_37	+1	known	missense	c.1151	p.C384F	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF419	HGNC	ENSG00000105136	tier1	-	-	130	0	0.00	110	23	17.29
ZNF670	0	genome.wustl.edu	37	1	247201663	247201663	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	247201663	247201663	C	T	SNP	ZNF670	ENST00000366503	human	ensembl	74_37	-1	known	silent	c.258	p.Q86	0.014	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF670	HGNC	ENSG00000135747	tier1	-	-	135	0	0.00	77	43	35.83
ZNF92	0	genome.wustl.edu	37	7	64863782	64863782	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	7	64863782	64863782	C	T	SNP	ZNF92	ENST00000328747	human	ensembl	74_37	+1	known	missense	c.755	p.T252I	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF92	HGNC	ENSG00000146757	tier1	-	-	58	0	0.00	27	8	22.86
NBPF10	0	genome.wustl.edu	37	1	145303942	145303942	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	145303942	145303942	G	A	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.1339	p.V447I	0.003	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386				225	0	0	185	42	18.5022
NES	0	genome.wustl.edu	37	1	156641841	156641841	+	Silent	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	156641841	156641841	A	T	SNP	NES	ENST00000368223	human	ensembl	74_37	-1	known	silent	c.2139	p.S713	0.000	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688				76	0	0	63	32	33.6842
MR1	0	genome.wustl.edu	37	1	181003196	181003196	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	181003196	181003196	A	G	SNP	MR1	ENST00000367580	human	ensembl	74_37	+1	known	missense	c.53	p.K18R	0.021	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	MR1	HGNC	ENSG00000153029				58	0	0	40	3	6.97674
LAMC1	0	genome.wustl.edu	37	1	183085791	183085791	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	183085791	183085791	G	A	SNP	LAMC1	ENST00000258341	human	ensembl	74_37	+1	known	missense	c.1408	p.E470K	1.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Laminin_N,pfam_EGF_laminin,pfam_Laminin_B_type_IV,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC1	HGNC	ENSG00000135862				98	0	0	81	6	6.89655
TRAF3IP3	0	genome.wustl.edu	37	1	209955414	209955414	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	209955414	209955414	G	A	SNP	TRAF3IP3	ENST00000367024	human	ensembl	74_37	+1	known	missense	c.1577	p.R526Q	0.004	NULL	NULL	-	no_errors	TRAF3IP3	HGNC	ENSG00000009790				80	0	0	69	11	13.75
IRF6	0	genome.wustl.edu	37	1	209961959	209961959	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	209961959	209961959	C	T	SNP	IRF6	ENST00000367021	human	ensembl	74_37	-1	known	missense	c.1210	p.E404K	0.999	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF6	HGNC	ENSG00000117595				56	0	0	29	19	39.5833
SPATA17	0	genome.wustl.edu	37	1	217824481	217824481	+	Silent	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	217824481	217824481	A	G	SNP	SPATA17	ENST00000366933	human	ensembl	74_37	+1	known	silent	c.201	p.R67	1.000	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SPATA17	HGNC	ENSG00000162814				56	0	0	57	10	14.9254
HHIPL2	0	genome.wustl.edu	37	1	222717244	222717244	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	222717244	222717244	G	A	SNP	HHIPL2	ENST00000343410	human	ensembl	74_37	-1	known	silent	c.609	p.G203	1.000	pfam_Folate_rcpt-like	pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Quinoprot_gluc/sorb_DH,superfamily_Saposin-like	-	no_errors	HHIPL2	HGNC	ENSG00000143512				75	0	0	46	22	32.3529
TCEA3	0	genome.wustl.edu	37	1	23724340	23724340	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	23724340	23724340	C	T	SNP	TCEA3	ENST00000450454	human	ensembl	74_37	-1	known	silent	c.552	p.G184	0.997	pfam_TFIIS_cen_dom,superfamily_TFIIS_cen_dom,pirsf_TF_IIS-rel,tigrfam_TFSII	pfam_TFIIS_cen_dom,pfam_Znf_TFIIS,pfam_TFIIS_N,superfamily_TFIIS_cen_dom,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_TFS2M,smart_Znf_TFIIS,pirsf_TF_IIS-rel,pfscan_Znf_TFIIS,tigrfam_TFSII	-	no_errors	TCEA3	HGNC	ENSG00000204219				70	0	0	49	21	30
ZNF670	0	genome.wustl.edu	37	1	247201663	247201663	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	247201663	247201663	C	T	SNP	ZNF670	ENST00000366503	human	ensembl	74_37	-1	known	silent	c.258	p.Q86	0.014	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF670	HGNC	ENSG00000135747				129	0	0	75	42	35.8974
HEYL	0	genome.wustl.edu	37	1	40092770	40092770	+	Silent	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	40092770	40092770	C	A	SNP	HEYL	ENST00000372852	human	ensembl	74_37	-1	known	silent	c.396	p.L132	1.000	pfam_Orange,smart_Orange_subgr,pfscan_Orange	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	HEYL	HGNC	ENSG00000163909				75	0	0	54	17	23.9437
HIVEP3	0	genome.wustl.edu	37	1	42050238	42050238	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	42050238	42050238	C	A	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.231	p.Q77H	0.791	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				265	0	0	192	133	40.9231
FAM151A	0	genome.wustl.edu	37	1	55075100	55075100	+	Silent	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	55075100	55075100	G	T	SNP	FAM151A	ENST00000302250	human	ensembl	74_37	-1	known	silent	c.1599	p.P533	0.559	pfam_DUF2181	pfam_DUF2181	-	no_errors	FAM151A	HGNC	ENSG00000162391				118	0	0	82	33	28.6957
TTLL7	0	genome.wustl.edu	37	1	84386949	84386949	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	84386949	84386949	T	G	SNP	TTLL7	ENST00000260505	human	ensembl	74_37	-1	known	missense	c.1271	p.E424A	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL7	HGNC	ENSG00000137941				67	0	0	55	12	17.9104
GBP3	0	genome.wustl.edu	37	1	89486355	89486355	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	89486355	89486355	G	C	SNP	GBP3	ENST00000370481	human	ensembl	74_37	-1	known	missense	c.50	p.T17S	0.005	superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP3	HGNC	ENSG00000117226				107	0	0	83	30	26.5487
C10orf76	0	genome.wustl.edu	37	10	103793096	103793096	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	103793096	103793096	T	A	SNP	C10orf76	ENST00000370033	human	ensembl	74_37	-1	known	missense	c.103	p.T35S	1.000	NULL	pfam_DUF1741,superfamily_ARM-type_fold	-	no_errors	C10orf76	HGNC	ENSG00000120029				75	0	0	44	14	24.1379
ZNF33A	0	genome.wustl.edu	37	10	38343351	38343351	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	38343351	38343351	C	G	SNP	ZNF33A	ENST00000432900	human	ensembl	74_37	+1	known	missense	c.317	p.S106C	0.926	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180				80	0	0	60	6	9.09091
SEC24C	0	genome.wustl.edu	37	10	75520604	75520604	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	75520604	75520604	C	T	SNP	SEC24C	ENST00000339365	human	ensembl	74_37	+1	known	silent	c.984	p.S328	0.996	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24C	HGNC	ENSG00000176986				127	0	0	84	65	43.6242
CAMK2G	0	genome.wustl.edu	37	10	75608870	75608870	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	75608870	75608870	C	T	SNP	CAMK2G	ENST00000423381	human	ensembl	74_37	-1	known	missense	c.418	p.E140K	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2G	HGNC	ENSG00000148660				68	0	0	101	20	16.5289
LARP4B	0	genome.wustl.edu	37	10	860754	860754	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	860754	860754	G	C	SNP	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	missense	c.1857	p.H619Q	0.072	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				17	0	0	20	4	16.6667
PTEN	0	genome.wustl.edu	37	10	89711882	89711882	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	10	89711882	89711882	C	G	SNP	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	missense	c.500	p.T167S	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862				101	0	0	81	16	16.4948
MUC6	0	genome.wustl.edu	37	11	1016179	1016179	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	1016179	1016179	T	A	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	missense	c.6622	p.I2208F	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				40	0	0	18	9	33.3333
DDX25	0	genome.wustl.edu	37	11	125780346	125780346	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	125780346	125780346	G	C	SNP	DDX25	ENST00000263576	human	ensembl	74_37	+1	known	missense	c.595	p.V199L	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX25	HGNC	ENSG00000109832				83	0	0	59	24	28.9157
PIK3C2A	0	genome.wustl.edu	37	11	17170212	17170212	+	Splice_Site	SNP	A	A	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	17170212	17170212	A	C	SNP	PIK3C2A	ENST00000265970	human	ensembl	74_37	-1	known	splice_site	c.1448+2	e4+2	1.000	-	-	-	no_errors	PIK3C2A	HGNC	ENSG00000011405				29	0	0	27	13	32.5
PACSIN3	0	genome.wustl.edu	37	11	47202174	47202174	+	Silent	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	47202174	47202174	C	G	SNP	PACSIN3	ENST00000298838	human	ensembl	74_37	-1	known	silent	c.279	p.A93	0.666	pfam_FCH_dom,smart_FCH_dom	pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PACSIN3	HGNC	ENSG00000165912				62	0	0	57	22	27.8481
OR52D1	0	genome.wustl.edu	37	11	5510460	5510460	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	5510460	5510460	G	A	SNP	OR52D1	ENST00000322641	human	ensembl	74_37	+1	known	missense	c.524	p.R175H	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52D1	HGNC	ENSG00000181609				271	1	0.367647	188	13	6.46766
UBQLNL	0	genome.wustl.edu	37	11	5537060	5537060	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	5537060	5537060	C	G	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	missense	c.612	p.L204F	1.000	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518				178	0	0	108	14	11.4754
OR5D13	0	genome.wustl.edu	37	11	55540935	55540935	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	55540935	55540935	C	A	SNP	OR5D13	ENST00000361760	human	ensembl	74_37	+1	known	missense	c.22	p.Q8K	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D13	HGNC	ENSG00000198877				138	0	0	95	23	19.4915
OR52B6	0	genome.wustl.edu	37	11	5603050	5603050	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	5603050	5603050	G	A	SNP	OR52B6	ENST00000345043	human	ensembl	74_37	+1	known	missense	c.944	p.R315K	0.859	prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52B6	HGNC	ENSG00000187747				136	0	0	76	11	12.6437
OR8U1	0	genome.wustl.edu	37	11	56143410	56143410	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	56143410	56143410	T	G	SNP	OR8U1	ENST00000302270	human	ensembl	74_37	+1	known	missense	c.311	p.F104C	0.086	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8U1	HGNC	ENSG00000172199				144	0	0	84	42	33.3333
FCHSD2	0	genome.wustl.edu	37	11	72554209	72554209	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	72554209	72554209	G	A	SNP	FCHSD2	ENST00000409418	human	ensembl	74_37	-1	known	silent	c.1692	p.N564	0.990	NULL	pfam_SH3_domain,pfam_FCH_dom,pfam_SH3_2,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	FCHSD2	HGNC	ENSG00000137478				39	0	0	28	7	20
TRIM49	0	genome.wustl.edu	37	11	89531652	89531652	+	Silent	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	11	89531652	89531652	A	T	SNP	TRIM49	ENST00000329758	human	ensembl	74_37	-1	known	silent	c.1005	p.T335	0.505	superfamily_ConA-like_lec_gl_sf,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM49	HGNC	ENSG00000168930				62	0	0	33	17	34
STAB2	0	genome.wustl.edu	37	12	104099463	104099463	+	Silent	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	104099463	104099463	C	A	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	silent	c.3954	p.T1318	0.001	superfamily_Growth_fac_rcpt_N_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011				66	0	0	72	4	5.26316
C12orf23	0	genome.wustl.edu	37	12	107360887	107360887	+	Splice_Site	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	107360887	107360887	A	T	SNP	C12orf23	ENST00000280756	human	ensembl	74_37	+1	known	splice_site	c.1-2	e1-2	0.983	-	-	-	no_errors	C12orf23	HGNC	ENSG00000151135				46	0	0	44	3	6.38298
SELPLG	0	genome.wustl.edu	37	12	109017037	109017037	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	109017037	109017037	G	A	SNP	SELPLG	ENST00000550948	human	ensembl	74_37	-1	known	silent	c.1047	p.G349	0.837	NULL	NULL	-	no_errors	SELPLG	HGNC	ENSG00000110876				50	0	0	48	18	27.2727
BICD1	0	genome.wustl.edu	37	12	32458846	32458846	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	32458846	32458846	C	T	SNP	BICD1	ENST00000281474	human	ensembl	74_37	+1	known	silent	c.795	p.I265	0.997	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc,superfamily_SPOC_like_C_dom	-	no_errors	BICD1	HGNC	ENSG00000151746				33	0	0	239	21	8.07692
PDZRN4	0	genome.wustl.edu	37	12	41967633	41967633	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	41967633	41967633	G	T	SNP	PDZRN4	ENST00000402685	human	ensembl	74_37	+1	known	missense	c.3052	p.A1018S	1.000	NULL	pfam_PDZ,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	PDZRN4	HGNC	ENSG00000165966				51	0	0	64	7	9.85915
KMT2D	0	genome.wustl.edu	37	12	49427330	49427330	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	49427330	49427330	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	nonsense	c.11158	p.Q3720*	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				63	0	0	79	14	15.0538
TPH2	0	genome.wustl.edu	37	12	72416245	72416245	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	72416245	72416245	G	T	SNP	TPH2	ENST00000333850	human	ensembl	74_37	+1	known	nonsense	c.1135	p.G379*	1.000	pfam_Aromatic-AA_hydroxylase_C,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Trp_5_mOase	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Trp_5_mOase	-	no_errors	TPH2	HGNC	ENSG00000139287				62	0	0	133	35	20.8333
PZP	0	genome.wustl.edu	37	12	9302161	9302161	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	12	9302161	9302161	G	C	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	missense	c.4422	p.S1474R	0.929	superfamily_A-macroglobulin_rcpt-bd	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838				103	0	0	38	23	37.7049
SACS	0	genome.wustl.edu	37	13	23906217	23906217	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	13	23906217	23906217	C	G	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.11798	p.R3933T	0.999	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				120	0	0	92	28	23.3333
TRPC4	0	genome.wustl.edu	37	13	38357279	38357279	+	Silent	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	13	38357279	38357279	A	G	SNP	TRPC4	ENST00000379681	human	ensembl	74_37	-1	known	silent	c.192	p.N64	0.998	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC4_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC4	HGNC	ENSG00000133107				106	0	0	77	25	24.5098
PCDH9	0	genome.wustl.edu	37	13	67801360	67801360	+	Silent	SNP	T	T	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	13	67801360	67801360	T	G	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	silent	c.1213	p.R405	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226				103	0	0	56	23	29.1139
MYO5A	0	genome.wustl.edu	37	15	52689432	52689432	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	15	52689432	52689432	G	T	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	missense	c.1285	p.Q429K	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535				66	0	0	51	24	32
DPP8	0	genome.wustl.edu	37	15	65790304	65790304	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	15	65790304	65790304	A	T	SNP	DPP8	ENST00000341861	human	ensembl	74_37	-1	known	missense	c.661	p.C221S	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP8	HGNC	ENSG00000074603				94	0	0	75	21	21.875
LOC283693	0	genome.wustl.edu	37	15	83395038	83395038	+	RNA	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	15	83395038	83395038	A	T	SNP	LOC283693	ENST00000560958	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.222	-	-	-	no_errors	RP11-752G15.9	Clone_based_vega_gene	ENSG00000259315				15	0	0	8	7	46.6667
METTL9	0	genome.wustl.edu	37	16	21624099	21624099	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	21624099	21624099	A	G	SNP	METTL9	ENST00000358154	human	ensembl	74_37	+1	known	missense	c.299	p.Y100C	1.000	pfam_DREV_MeTrfase	pfam_DREV_MeTrfase,pfam_Methyltransf_12,pfam_Methyltransf_11	-	no_errors	METTL9	HGNC	ENSG00000197006				64	0	0	51	23	31.0811
E4F1	0	genome.wustl.edu	37	16	2282899	2282899	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	2282899	2282899	C	T	SNP	E4F1	ENST00000301727	human	ensembl	74_37	+1	known	silent	c.873	p.D291	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	E4F1	HGNC	ENSG00000167967				72	0	0	38	17	30.9091
SALL1	0	genome.wustl.edu	37	16	51174367	51174367	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	51174367	51174367	C	T	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	missense	c.1766	p.G589D	0.267	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449				66	0	0	24	16	40
CNTNAP4	0	genome.wustl.edu	37	16	76481974	76481974	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	76481974	76481974	A	G	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	missense	c.601	p.S201G	0.986	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910				60	0	0	26	14	35
CDH13	0	genome.wustl.edu	37	16	83065695	83065695	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	16	83065695	83065695	G	A	SNP	CDH13	ENST00000566620	human	ensembl	74_37	+1	known	missense	c.238	p.G80S	0.000	pfam_Cadherin_pro_dom,superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH13	HGNC	ENSG00000140945				20	0	0	10	6	37.5
MYH4	0	genome.wustl.edu	37	17	10367836	10367836	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	10367836	10367836	C	A	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.601	p.V201F	0.983	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424				44	0	0	42	17	28.8136
MYO15A	0	genome.wustl.edu	37	17	18051478	18051478	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	18051478	18051478	G	A	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	silent	c.6645	p.A2215	0.844	pfam_MyTH4_dom,smart_MyTH4_dom,pfscan_MyTH4_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				87	0	0	86	84	49.4118
PHF12	0	genome.wustl.edu	37	17	27237293	27237293	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	27237293	27237293	C	T	SNP	PHF12	ENST00000332830	human	ensembl	74_37	-1	known	silent	c.2310	p.P770	0.082	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_SMAD_FHA_domain,smart_Znf_PHD,pfscan_FHA_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF12	HGNC	ENSG00000109118				87	0	0	71	30	29.703
SPPL2C	0	genome.wustl.edu	37	17	43924067	43924067	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	43924067	43924067	G	A	SNP	SPPL2C	ENST00000329196	human	ensembl	74_37	+1	known	missense	c.1795	p.D599N	0.390	NULL	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2C	HGNC	ENSG00000185294				118	0	0	78	31	28.4404
CUEDC1	0	genome.wustl.edu	37	17	55962641	55962641	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	55962641	55962641	G	A	SNP	CUEDC1	ENST00000360238	human	ensembl	74_37	-1	known	silent	c.285	p.S95	0.663	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	CUEDC1	HGNC	ENSG00000180891				102	0	0	76	27	26.2136
C17orf82	0	genome.wustl.edu	37	17	59489996	59489996	+	Silent	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	59489996	59489996	G	T	SNP	C17orf82	ENST00000335108	human	ensembl	74_37	+1	known	silent	c.660	p.G220	0.000	NULL	NULL	-	no_errors	C17orf82	HGNC	ENSG00000187013				10	0	0	11	5	31.25
CCDC47	0	genome.wustl.edu	37	17	61833661	61833661	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	61833661	61833661	G	A	SNP	CCDC47	ENST00000225726	human	ensembl	74_37	-1	known	missense	c.887	p.P296L	1.000	pfam_DUF1682	pfam_DUF1682	-	no_errors	CCDC47	HGNC	ENSG00000108588				65	0	0	57	26	31.3253
SLC16A11	0	genome.wustl.edu	37	17	6946019	6946019	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	6946019	6946019	C	T	SNP	SLC16A11	ENST00000308009	human	ensembl	74_37	-1	known	missense	c.482	p.R161H	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A11	HGNC	ENSG00000174326				8	0	0	4	6	60
P4HB	0	genome.wustl.edu	37	17	79813048	79813048	+	Silent	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	79813048	79813048	G	C	SNP	P4HB	ENST00000331483	human	ensembl	74_37	-1	known	silent	c.594	p.L198	0.025	superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	P4HB	HGNC	ENSG00000185624				293	0	0	206	75	26.6904
TEX19	0	genome.wustl.edu	37	17	80320393	80320393	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	80320393	80320393	G	A	SNP	TEX19	ENST00000333437	human	ensembl	74_37	+1	known	missense	c.367	p.E123K	0.999	NULL	NULL	-	no_errors	TEX19	HGNC	ENSG00000182459				178	0	0	176	48	21.4286
HEXDC	0	genome.wustl.edu	37	17	80399097	80399097	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	17	80399097	80399097	G	A	SNP	HEXDC	ENST00000337014	human	ensembl	74_37	+1	known	missense	c.1207	p.A403T	1.000	NULL	pfam_Glyco_hydro_20_cat-core,superfamily_Glycoside_hydrolase_SF	-	no_errors	HEXDC	HGNC	ENSG00000169660				143	0	0	96	29	23.2
DSG3	0	genome.wustl.edu	37	18	29055855	29055855	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	18	29055855	29055855	G	A	SNP	DSG3	ENST00000257189	human	ensembl	74_37	+1	known	missense	c.2632	p.G878S	0.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG3	HGNC	ENSG00000134757				112	0	0	114	9	7.31707
COLEC12	0	genome.wustl.edu	37	18	346722	346722	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	18	346722	346722	G	A	SNP	COLEC12	ENST00000400256	human	ensembl	74_37	-1	known	silent	c.900	p.I300	1.000	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	COLEC12	HGNC	ENSG00000158270				78	0	0	64	64	50
S1PR5	0	genome.wustl.edu	37	19	10624657	10624657	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	10624657	10624657	G	A	SNP	S1PR5	ENST00000333430	human	ensembl	74_37	-1	known	missense	c.1031	p.A344V	0.203	prints_EDG8_S1P_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_EDG8_S1P_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn	-	no_errors	S1PR5	HGNC	ENSG00000180739				31	0	0	16	10	38.4615
GDF15	0	genome.wustl.edu	37	19	18499410	18499410	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	18499410	18499410	C	G	SNP	GDF15	ENST00000252809	human	ensembl	74_37	+1	known	missense	c.592	p.R198G	0.356	NULL	pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	GDF15	HGNC	ENSG00000130513				27	0	0	22	7	24.1379
UHRF1	0	genome.wustl.edu	37	19	4954800	4954800	+	RNA	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	4954800	4954800	G	A	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063				95	0	0	61	21	25.6098
ZNF321P	0	genome.wustl.edu	37	19	53432662	53432662	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	53432662	53432662	A	T	SNP	ZNF321P	ENST00000391777	human	ensembl	74_37	-1	known	missense	c.196	p.S66T	0.295	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF321P	HGNC	ENSG00000221874				98	0	0	77	27	25.9615
ZNF419	0	genome.wustl.edu	37	19	58005073	58005073	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	58005073	58005073	G	T	SNP	ZNF419	ENST00000424930	human	ensembl	74_37	+1	known	missense	c.1151	p.C384F	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF419	HGNC	ENSG00000105136				117	0	0	99	20	16.8067
ZNF8	0	genome.wustl.edu	37	19	58805586	58805586	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	58805586	58805586	G	C	SNP	ZNF8	ENST00000196548	human	ensembl	74_37	+1	known	missense	c.412	p.G138R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF8	Uniprot_gn	ENSG00000083842				34	0	0	47	4	7.84314
MUC16	0	genome.wustl.edu	37	19	9046510	9046510	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	19	9046510	9046510	A	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.35121	p.S11707R	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				139	0	0	114	8	6.55738
GORASP2	0	genome.wustl.edu	37	2	171806765	171806765	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	171806765	171806765	G	A	SNP	GORASP2	ENST00000452526	human	ensembl	74_37	+1	known	missense	c.436	p.D146N	1.000	pfam_GRASP55/65_PDZ,superfamily_PDZ	pfam_GRASP55/65_PDZ,superfamily_PDZ	-	no_errors	GORASP2	HGNC	ENSG00000115806				52	0	0	55	14	20.2899
AGAP1	0	genome.wustl.edu	37	2	236659111	236659111	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	236659111	236659111	G	A	SNP	AGAP1	ENST00000304032	human	ensembl	74_37	+1	known	missense	c.652	p.V218M	1.000	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP1	HGNC	ENSG00000157985				147	0	0	89	33	27.0492
ANO7	0	genome.wustl.edu	37	2	242155593	242155593	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	242155593	242155593	T	A	SNP	ANO7	ENST00000274979	human	ensembl	74_37	+1	known	missense	c.2074	p.W692R	0.992	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO7	HGNC	ENSG00000146205				44	0	0	59	16	21.3333
PRKD3	0	genome.wustl.edu	37	2	37509738	37509738	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	37509738	37509738	C	T	SNP	PRKD3	ENST00000234179	human	ensembl	74_37	-1	known	missense	c.935	p.R312H	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_DAG/PE-bd	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD3	HGNC	ENSG00000115825				73	0	0	64	6	8.57143
NRXN1	0	genome.wustl.edu	37	2	51254965	51254965	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	51254965	51254965	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.447	p.V149	0.994	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				53	0	0	30	14	31.8182
EHBP1	0	genome.wustl.edu	37	2	63182694	63182694	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	63182694	63182694	A	G	SNP	EHBP1	ENST00000263991	human	ensembl	74_37	+1	known	missense	c.2464	p.R822G	1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1	HGNC	ENSG00000115504				26	0	0	27	10	27.027
GFPT1	0	genome.wustl.edu	37	2	69565670	69565670	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	2	69565670	69565670	C	G	SNP	GFPT1	ENST00000357308	human	ensembl	74_37	-1	known	missense	c.1231	p.E411Q	1.000	pfam_SIS,tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT1	HGNC	ENSG00000198380				61	0	0	58	6	9.375
NINL	0	genome.wustl.edu	37	20	25456684	25456684	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	25456684	25456684	G	A	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	silent	c.3243	p.N1081	0.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004				111	0	0	101	7	6.48148
VPS16	0	genome.wustl.edu	37	20	2841502	2841502	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	2841502	2841502	C	G	SNP	VPS16	ENST00000380445	human	ensembl	74_37	+1	known	missense	c.623	p.S208C	0.996	pfam_Vps16_N,pirsf_VPS16	pfam_Vps16_N,pfam_Vps16_C,pirsf_VPS16	-	no_errors	VPS16	HGNC	ENSG00000215305				68	0	0	51	3	5.55556
CHD6	0	genome.wustl.edu	37	20	40050378	40050378	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	40050378	40050378	A	G	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.4897	p.Y1633H	0.997	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177				50	0	0	70	12	14.6341
L3MBTL1	0	genome.wustl.edu	37	20	42143771	42143771	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	42143771	42143771	G	A	SNP	L3MBTL1	ENST00000418998	human	ensembl	74_37	+1	known	missense	c.559	p.D187N	0.007	NULL	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513				116	0	0	101	9	8.18182
FAM209B	0	genome.wustl.edu	37	20	55108405	55108405	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	55108405	55108405	C	T	SNP	FAM209B	ENST00000371325	human	ensembl	74_37	+1	known	missense	c.8	p.T3M	0.256	NULL	NULL	-	no_errors	FAM209B	HGNC	ENSG00000213714				163	0	0	112	45	28.6624
COL9A3	0	genome.wustl.edu	37	20	61460839	61460839	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	20	61460839	61460839	G	A	SNP	COL9A3	ENST00000343916	human	ensembl	74_37	+1	known	silent	c.1041	p.E347	1.000	NULL	pfam_Collagen	-	no_errors	COL9A3	HGNC	ENSG00000092758				57	0	0	49	12	19.6721
DGCR14	0	genome.wustl.edu	37	22	19127524	19127524	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	22	19127524	19127524	C	G	SNP	DGCR14	ENST00000252137	human	ensembl	74_37	-1	known	missense	c.414	p.E138D	0.995	pfam_Nuclear_protein_DGCR14	pfam_Nuclear_protein_DGCR14	-	no_errors	DGCR14	HGNC	ENSG00000100056				151	0	0	59	34	36.5591
MOV10L1	0	genome.wustl.edu	37	22	50553554	50553554	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	22	50553554	50553554	T	A	SNP	MOV10L1	ENST00000262794	human	ensembl	74_37	+1	known	missense	c.1138	p.C380S	0.000	NULL	superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold	-	no_errors	MOV10L1	HGNC	ENSG00000073146				113	0	0	40	34	45.9459
STAG1	0	genome.wustl.edu	37	3	136096564	136096564	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	3	136096564	136096564	T	C	SNP	STAG1	ENST00000383202	human	ensembl	74_37	-1	known	missense	c.2308	p.K770E	1.000	superfamily_ARM-type_fold	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG1	HGNC	ENSG00000118007				67	0	0	50	22	30.5556
DENND6A	0	genome.wustl.edu	37	3	57632109	57632109	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	3	57632109	57632109	C	A	SNP	DENND6A	ENST00000311128	human	ensembl	74_37	-1	known	missense	c.875	p.G292V	1.000	pfam_Afi1_N,pfam_DENN_dom	pfam_Afi1_N,pfam_ABL9/DENND6_dom,pfam_DENN_dom	-	no_errors	DENND6A	HGNC	ENSG00000174839				48	0	0	53	5	8.62069
FLNB	0	genome.wustl.edu	37	3	58139200	58139200	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	3	58139200	58139200	C	T	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.6466	p.R2156W	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				101	0	0	88	33	27.2727
MARCH1	0	genome.wustl.edu	37	4	164534501	164534501	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	164534501	164534501	C	G	SNP	MARCH1	ENST00000274056	human	ensembl	74_37	-1	known	missense	c.207	p.R69S	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH1	HGNC	ENSG00000145416				84	0	0	43	23	34.8485
SLIT2	0	genome.wustl.edu	37	4	20525447	20525447	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	20525447	20525447	A	C	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.1195	p.N399H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				108	0	0	84	24	22.2222
SLIT2	0	genome.wustl.edu	37	4	20525485	20525485	+	Silent	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	20525485	20525485	C	T	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	silent	c.1233	p.I411	0.923	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				117	0	0	100	37	27.0073
ADAMTS3	0	genome.wustl.edu	37	4	73154516	73154516	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	73154516	73154516	C	T	SNP	ADAMTS3	ENST00000286657	human	ensembl	74_37	-1	known	missense	c.3001	p.G1001S	0.994	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS3	HGNC	ENSG00000156140				45	0	0	53	6	10.1695
AFM	0	genome.wustl.edu	37	4	74364921	74364921	+	Silent	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	4	74364921	74364921	T	C	SNP	AFM	ENST00000226355	human	ensembl	74_37	+1	known	silent	c.1380	p.T460	0.234	pirsf_Serum_albumin/AFP,pfam_Serum_albumin_N,superfamily_Serum_albumin-like,smart_Serum_albumin_N,prints_ALB/AFP/VDB	pirsf_Serum_albumin/AFP,pfam_Serum_albumin_N,superfamily_Serum_albumin-like,smart_Serum_albumin_N,prints_ALB/AFP/VDB,prints_Alpha-fetoprotein	-	no_errors	AFM	HGNC	ENSG00000079557				63	0	0	71	4	5.33333
DMXL1	0	genome.wustl.edu	37	5	118485816	118485816	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	118485816	118485816	T	A	SNP	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	missense	c.4294	p.L1432I	0.220	pfam_Rav1p_C	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869				83	0	0	30	22	42.3077
PRDM9	0	genome.wustl.edu	37	5	23521169	23521169	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	23521169	23521169	T	A	SNP	PRDM9	ENST00000296682	human	ensembl	74_37	+1	known	nonsense	c.389	p.L130*	0.001	NULL	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256				64	0	0	34	16	32
GHR	0	genome.wustl.edu	37	5	42718570	42718570	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	42718570	42718570	G	A	SNP	GHR	ENST00000230882	human	ensembl	74_37	+1	known	missense	c.961	p.E321K	1.000	NULL	pfam_Growth/epo_recpt_lig-bind,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	GHR	HGNC	ENSG00000112964				181	0	0	161	12	6.93642
ACTBL2	0	genome.wustl.edu	37	5	56777908	56777908	+	Silent	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	56777908	56777908	A	G	SNP	ACTBL2	ENST00000423391	human	ensembl	74_37	-1	known	silent	c.627	p.I209	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTBL2	HGNC	ENSG00000169067				81	0	0	78	26	25
DEPDC1B	0	genome.wustl.edu	37	5	59940671	59940671	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	59940671	59940671	C	A	SNP	DEPDC1B	ENST00000265036	human	ensembl	74_37	-1	known	nonsense	c.610	p.E204*	1.000	pfscan_RhoGAP_dom	pfam_DEP_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_DEP_dom,pfscan_DEP_dom,pfscan_RhoGAP_dom	-	no_errors	DEPDC1B	HGNC	ENSG00000035499				42	0	0	29	10	25.641
GFM2	0	genome.wustl.edu	37	5	74026094	74026094	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	74026094	74026094	G	A	SNP	GFM2	ENST00000296805	human	ensembl	74_37	-1	known	missense	c.1717	p.R573C	0.005	pfam_Transl_elong_EFG/EF2_IV,superfamily_Ribosomal_S5_D2-typ_fold,smart_Transl_elong_EFG/EF2_IV	pfam_EF_GTP-bd_dom,pfam_EFG_V,pfam_Transl_elong_EFG/EF2_IV,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_EFG_III-V,superfamily_Ribosomal_S5_D2-typ_fold,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	GFM2	HGNC	ENSG00000164347				47	0	0	42	6	12.5
TTC37	0	genome.wustl.edu	37	5	94852652	94852652	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	5	94852652	94852652	C	T	SNP	TTC37	ENST00000358746	human	ensembl	74_37	-1	known	missense	c.2404	p.D802N	0.984	pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC37	HGNC	ENSG00000198677				22	0	0	15	9	37.5
TUBE1	0	genome.wustl.edu	37	6	112392631	112392631	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	112392631	112392631	A	G	SNP	TUBE1	ENST00000368662	human	ensembl	74_37	-1	known	missense	c.1412	p.L471P	0.999	NULL	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Epsilon_tubulin,prints_Tubulin	-	no_errors	TUBE1	HGNC	ENSG00000074935				130	0	0	100	50	33.3333
MED23	0	genome.wustl.edu	37	6	131917212	131917212	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	131917212	131917212	C	A	SNP	MED23	ENST00000368058	human	ensembl	74_37	-1	known	missense	c.2888	p.G963V	1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282				114	0	0	104	15	12.605
UTRN	0	genome.wustl.edu	37	6	145075901	145075901	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	145075901	145075901	G	C	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	missense	c.8401	p.D2801H	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818				79	0	0	56	12	17.6471
PRRC2A	0	genome.wustl.edu	37	6	31604290	31604290	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	31604290	31604290	C	T	SNP	PRRC2A	ENST00000376007	human	ensembl	74_37	+1	known	missense	c.5839	p.R1947C	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2A	HGNC	ENSG00000204469				171	0	0	260	45	14.7541
EHMT2	0	genome.wustl.edu	37	6	31864396	31864396	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	31864396	31864396	G	A	SNP	EHMT2	ENST00000395728	human	ensembl	74_37	-1	known	silent	c.486	p.G162	0.505	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT2	HGNC	ENSG00000204371				144	0	0	221	57	20.5036
PKHD1	0	genome.wustl.edu	37	6	51889383	51889383	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	51889383	51889383	G	A	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.5225	p.T1742M	0.000	superfamily_Ig_E-set	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				104	1	0.952381	85	24	22.0183
MDN1	0	genome.wustl.edu	37	6	90494814	90494814	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	6	90494814	90494814	G	A	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.1366	p.P456S	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				187	0	0	107	16	13.0081
ABCA13	0	genome.wustl.edu	37	7	48314183	48314183	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	7	48314183	48314183	C	A	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.4920	p.N1640K	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869				150	1	0.662252	102	31	23.3083
ZNF92	0	genome.wustl.edu	37	7	64863782	64863782	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	7	64863782	64863782	C	T	SNP	ZNF92	ENST00000328747	human	ensembl	74_37	+1	known	missense	c.755	p.T252I	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF92	HGNC	ENSG00000146757				54	0	0	24	7	22.5806
ZKSCAN1	0	genome.wustl.edu	37	7	99621085	99621085	+	Splice_Site	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	7	99621085	99621085	G	C	SNP	ZKSCAN1	ENST00000426572	human	ensembl	74_37	+1	putative	splice_site	c.1+1	e0+1	0.001	-	-	-	no_errors	ZKSCAN1	HGNC	ENSG00000106261				79	0	0	54	12	18.1818
RP1L1	0	genome.wustl.edu	37	8	10465195	10465195	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	8	10465195	10465195	T	C	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.6413	p.E2138G	0.001	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638				368	0	0	298	112	27.3171
ST3GAL1	0	genome.wustl.edu	37	8	134488026	134488026	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	8	134488026	134488026	G	T	SNP	ST3GAL1	ENST00000319914	human	ensembl	74_37	-1	known	missense	c.242	p.T81N	0.998	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL1	HGNC	ENSG00000008513				35	0	0	24	12	33.3333
CNOT7	0	genome.wustl.edu	37	8	17102642	17102642	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	8	17102642	17102642	T	C	SNP	CNOT7	ENST00000361272	human	ensembl	74_37	-1	known	missense	c.20	p.D7G	1.000	NULL	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	-	no_errors	CNOT7	HGNC	ENSG00000198791				50	0	0	28	9	24.3243
CSMD1	0	genome.wustl.edu	37	8	3611558	3611558	+	Silent	SNP	A	A	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	8	3611558	3611558	A	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	silent	c.825	p.T275	0.472	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				37	0	0	24	6	20
SVEP1	0	genome.wustl.edu	37	9	113168658	113168658	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	113168658	113168658	G	C	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.9222	p.F3074L	0.337	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124				127	0	0	115	37	24.3421
CERCAM	0	genome.wustl.edu	37	9	131186792	131186792	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	131186792	131186792	G	A	SNP	CERCAM	ENST00000372838	human	ensembl	74_37	+1	known	missense	c.665	p.R222Q	1.000	NULL	pfam_Glyco_trans_25	-	no_errors	CERCAM	HGNC	ENSG00000167123				118	0	0	96	37	27.8195
IFNB1	0	genome.wustl.edu	37	9	21077518	21077518	+	Silent	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	21077518	21077518	G	A	SNP	IFNB1	ENST00000380232	human	ensembl	74_37	-1	known	silent	c.351	p.N117	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNB1	HGNC	ENSG00000171855				182	0	0	122	54	30.6818
SPATA31A6	0	genome.wustl.edu	37	9	43627261	43627261	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	9	43627261	43627261	G	T	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.1426	p.Q476K	0.003	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775				484	0	0	339	92	21.3457
HCCS	0	genome.wustl.edu	37	X	11135397	11135397	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	11135397	11135397	C	A	SNP	HCCS	ENST00000321143	human	ensembl	74_37	+1	known	missense	c.263	p.P88Q	1.000	pfam_Cyt_C/C1_haem_lyase	pfam_Cyt_C/C1_haem_lyase	-	no_errors	HCCS	HGNC	ENSG00000004961				139	0	0	96	31	24.4094
DOCK11	0	genome.wustl.edu	37	X	117796708	117796708	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	117796708	117796708	G	T	SNP	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	nonsense	c.5029	p.G1677*	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251				55	0	0	40	9	18.3673
NKAP	0	genome.wustl.edu	37	X	119064118	119064118	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	119064118	119064118	C	A	SNP	NKAP	ENST00000371410	human	ensembl	74_37	-1	known	missense	c.934	p.A312S	1.000	pfam_DUF926	pfam_DUF926	-	no_errors	NKAP	HGNC	ENSG00000101882				116	0	0	59	23	28.0488
ATP7A	0	genome.wustl.edu	37	X	77245413	77245413	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	77245413	77245413	G	A	SNP	ATP7A	ENST00000341514	human	ensembl	74_37	+1	known	missense	c.1295	p.R432K	1.000	pfam_HeavyMe-assoc_HMA,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,tigrfam_HMA_Cu_ion-bd	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_Cation_transp_P_typ_ATPase,prints_HG_scavenger,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7A	HGNC	ENSG00000165240				120	0	0	79	5	5.95238
CYLC1	0	genome.wustl.edu	37	X	83129190	83129190	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	83129190	83129190	T	A	SNP	CYLC1	ENST00000329312	human	ensembl	74_37	+1	known	missense	c.1474	p.L492I	0.001	NULL	NULL	-	no_errors	CYLC1	HGNC	ENSG00000183035				26	0	0	23	4	14.8148
CPXCR1	0	genome.wustl.edu	37	X	88008812	88008812	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	X	88008812	88008812	C	T	SNP	CPXCR1	ENST00000276127	human	ensembl	74_37	+1	known	nonsense	c.397	p.R133*	0.004	NULL	pfscan_Znf_C2H2	-	no_errors	CPXCR1	HGNC	ENSG00000147183				41	0	0	30	4	11.7647
STX12	0	genome.wustl.edu	37	1	28146221	28146222	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IN-A6RN-01A-12D-A33T-08	TCGA-IN-A6RN-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	013a1240-6c62-4f3d-b516-3d19065c82ce	b6f3d5c9-331b-4f7e-b0fd-c064e39eaeb8	1	28146221	28146222	-	A	INS	STX12	ENST00000373943	human	ensembl	74_37	+1	known	frame_shift_ins	c.710_711	p.Q238fs	1.000:0.997	pfam_T_SNARE_dom,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX12	HGNC	ENSG00000117758				40	0	0	32	14	30.4348
