Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACTRT2	0	genome.wustl.edu	37	1	2938312	2938312	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	2938312	2938312	G	A	SNP	ACTRT2	ENST00000378404	human	ensembl	74_37	+1	known	missense	c.62	p.C21Y	0.998	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT2	HGNC	ENSG00000169717	tier1	-	-	74	0	0.00	35	15	30.00
AFF4	0	genome.wustl.edu	37	5	132232559	132232559	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	132232559	132232559	G	T	SNP	AFF4	ENST00000265343	human	ensembl	74_37	-1	known	missense	c.1763	p.T588N	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF4	HGNC	ENSG00000072364	tier1	-	-	88	0	0.00	51	6	10.53
AGMO	0	genome.wustl.edu	37	7	15584446	15584446	+	Silent	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	15584446	15584446	G	C	SNP	AGMO	ENST00000342526	human	ensembl	74_37	-1	known	silent	c.360	p.A120	0.963	pfam_Fatty_acid_hydroxylase	pfam_Fatty_acid_hydroxylase	-	no_errors	AGMO	HGNC	ENSG00000187546	tier1	-	-	175	0	0.00	177	19	9.69
AKAP8	0	genome.wustl.edu	37	19	15484850	15484850	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	15484850	15484850	C	A	SNP	AKAP8	ENST00000269701	human	ensembl	74_37	-1	known	missense	c.118	p.A40S	0.215	NULL	pfam_AKAP95	-	no_errors	AKAP8	HGNC	ENSG00000105127	tier1	-	-	139	0	0.00	55	5	8.33
AKR1C1	0	genome.wustl.edu	37	10	5008192	5008192	+	Silent	SNP	T	T	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	5008192	5008192	T	C	SNP	AKR1C1	ENST00000380872	human	ensembl	74_37	+1	known	silent	c.171	p.N57	0.993	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1C1	HGNC	ENSG00000187134	tier1	-	-	99	0	0.00	57	6	9.52
ALPI	0	genome.wustl.edu	37	2	233321047	233321047	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	233321047	233321047	C	-	DEL	ALPI	ENST00000457560	human	ensembl	74_37	+1	known	frame_shift_del	c.138	p.L48fs	0.001	NULL	NULL	-	no_errors	ALPI	HGNC	ENSG00000163295	tier1			122	0	0.00	59	11	15.71
ALPK1	0	genome.wustl.edu	37	4	113353715	113353715	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	113353715	113353715	C	T	SNP	ALPK1	ENST00000177648	human	ensembl	74_37	+1	known	silent	c.3012	p.P1004	0.113	superfamily_Kinase-like_dom	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	ALPK1	HGNC	ENSG00000073331	tier1	-	-	153	0	0.00	86	19	18.10
AP3S1	0	genome.wustl.edu	37	5	115238605	115238605	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	115238605	115238605	G	A	SNP	AP3S1	ENST00000316788	human	ensembl	74_37	+1	known	missense	c.369	p.M123I	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	-	no_errors	AP3S1	HGNC	ENSG00000177879	tier1	rs74907835	-	105	0	0.00	86	9	9.47
AP3S1	0	genome.wustl.edu	37	5	115238635	115238635	+	Silent	SNP	T	T	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	115238635	115238635	T	C	SNP	AP3S1	ENST00000316788	human	ensembl	74_37	+1	known	silent	c.399	p.N133	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_AP_complex_ssu	-	no_errors	AP3S1	HGNC	ENSG00000177879	tier1	rs147903679	-	114	0	0.00	92	9	8.91
APC	0	genome.wustl.edu	37	5	112175951	112175952	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	112175951	112175952	-	A	INS	APC	ENST00000257430	human	ensembl	74_37	+1	known	frame_shift_ins	c.4660_4661	p.T1556fs	0.925:0.945	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1			80	0	0.00	46	33	41.77
AQP3	0	genome.wustl.edu	37	9	33442855	33442855	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	33442855	33442855	C	G	SNP	AQP3	ENST00000297991	human	ensembl	74_37	-1	known	missense	c.487	p.D163H	1.000	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_Aquaporin_3,prints_MIP,tigrfam_MIP	-	no_errors	AQP3	HGNC	ENSG00000165272	tier1	-	-	322	0	0.00	214	18	7.76
ATP4A	0	genome.wustl.edu	37	19	36048715	36048715	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	36048715	36048715	G	A	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	missense	c.1535	p.P512L	0.066	superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675	tier1	-	-	23	0	0.00	6	3	33.33
ATR	0	genome.wustl.edu	37	3	142275400	142275400	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	142275400	142275400	G	A	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	nonsense	c.1903	p.R635*	0.500	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	tier1	-	-	127	0	0.00	59	23	27.71
BOD1L1	0	genome.wustl.edu	37	4	13600735	13600735	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	13600735	13600735	G	A	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	missense	c.7789	p.P2597S	0.020	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	tier1	-	-	92	0	0.00	32	29	47.54
BOLL	0	genome.wustl.edu	37	2	198641828	198641828	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	198641828	198641828	G	A	SNP	BOLL	ENST00000321801	human	ensembl	74_37	-1	known	silent	c.267	p.F89	0.171	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	BOLL	HGNC	ENSG00000152430	tier1	-	-	61	0	0.00	46	5	9.80
BRCA2	0	genome.wustl.edu	37	13	32911836	32911836	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	32911836	32911836	C	T	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.3344	p.S1115F	1.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618	tier1	-	-	83	0	0.00	69	29	29.59
BTNL2	0	genome.wustl.edu	37	6	32372905	32372905	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	32372905	32372905	C	T	SNP	BTNL2	ENST00000454136	human	ensembl	74_37	-1	known	missense	c.238	p.G80R	0.749	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	BTNL2	HGNC	ENSG00000204290	tier1	-	-	217	0	0.00	156	27	14.75
CA5A	0	genome.wustl.edu	37	16	87960481	87960481	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	87960481	87960481	C	A	SNP	CA5A	ENST00000309893	human	ensembl	74_37	-1	known	missense	c.213	p.W71C	0.317	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA5A	HGNC	ENSG00000174990	tier1	-	-	27	0	0.00	11	8	42.11
CAB39	0	genome.wustl.edu	37	2	231624768	231624768	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	231624768	231624768	A	T	SNP	CAB39	ENST00000258418	human	ensembl	74_37	+1	known	missense	c.52	p.N18Y	1.000	pfam_Mo25,superfamily_ARM-type_fold	pfam_Mo25,superfamily_ARM-type_fold	-	no_errors	CAB39	HGNC	ENSG00000135932	tier1	-	-	154	0	0.00	93	8	7.92
CAB39	0	genome.wustl.edu	37	2	231624774	231624774	+	Nonsense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	231624774	231624774	A	T	SNP	CAB39	ENST00000258418	human	ensembl	74_37	+1	known	nonsense	c.58	p.K20*	1.000	pfam_Mo25,superfamily_ARM-type_fold	pfam_Mo25,superfamily_ARM-type_fold	-	no_errors	CAB39	HGNC	ENSG00000135932	tier1	-	-	148	0	0.00	93	7	7.00
CBLC	0	genome.wustl.edu	37	19	45293274	45293274	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	45293274	45293274	G	A	SNP	CBLC	ENST00000270279	human	ensembl	74_37	+1	known	missense	c.931	p.D311N	0.999	pfam_Adaptor_Cbl_SH2-like	pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Adaptor_Cbl_N_hlx,pfam_Znf_C3HC4_RING-type,superfamily_Adaptor_Cbl_N_hlx,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	CBLC	HGNC	ENSG00000142273	tier1	-	-	279	0	0.00	160	83	34.16
CCDC6	0	genome.wustl.edu	37	10	61552820	61552820	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	61552820	61552820	G	A	SNP	CCDC6	ENST00000263102	human	ensembl	74_37	-1	known	missense	c.1280	p.T427M	1.000	NULL	pfam_DUF2046	-	no_errors	CCDC6	HGNC	ENSG00000108091	tier1	-	-	80	0	0.00	29	29	50.00
CDH8	0	genome.wustl.edu	37	16	61851406	61851406	+	Silent	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	61851406	61851406	A	G	SNP	CDH8	ENST00000577390	human	ensembl	74_37	-1	known	silent	c.1254	p.P418	0.970	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH8	HGNC	ENSG00000150394	tier1	-	-	76	0	0.00	53	10	15.87
CECR1	0	genome.wustl.edu	37	22	17662742	17662742	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	22	17662742	17662742	C	T	SNP	CECR1	ENST00000262607	human	ensembl	74_37	-1	known	silent	c.1410	p.R470	1.000	pfam_A/AMP_deaminase_dom,tigrfam_Ad_deam-like	pfam_A/AMP_deaminase_dom,pfam_A_deaminase_N,tigrfam_Ad_deam-like	-	no_errors	CECR1	HGNC	ENSG00000093072	tier1	-	-	72	0	0.00	23	26	53.06
CECR1	0	genome.wustl.edu	37	22	17690543	17690543	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	22	17690543	17690543	G	A	SNP	CECR1	ENST00000262607	human	ensembl	74_37	-1	known	missense	c.25	p.R9W	0.000	NULL	pfam_A/AMP_deaminase_dom,pfam_A_deaminase_N,tigrfam_Ad_deam-like	-	no_errors	CECR1	HGNC	ENSG00000093072	tier1	-	-	65	0	0.00	35	8	18.60
CEP192	0	genome.wustl.edu	37	18	13068139	13068139	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	13068139	13068139	G	A	SNP	CEP192	ENST00000506447	human	ensembl	74_37	+1	known	missense	c.4661	p.R1554Q	0.000	NULL	NULL	-	no_errors	CEP192	HGNC	ENSG00000101639	tier1	-	-	120	0	0.00	141	13	8.44
CLSTN3	0	genome.wustl.edu	37	12	7287991	7287991	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	7287991	7287991	G	A	SNP	CLSTN3	ENST00000266546	human	ensembl	74_37	+1	known	missense	c.452	p.R151H	0.906	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN3	HGNC	ENSG00000139182	tier1	-	-	121	0	0.00	81	34	29.57
CNTNAP5	0	genome.wustl.edu	37	2	125261960	125261960	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	125261960	125261960	C	G	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.1151	p.P384R	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1	-	-	118	0	0.00	71	31	30.39
COG6	0	genome.wustl.edu	37	13	40254100	40254101	+	RNA	INS	-	-	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	40254100	40254101	-	T	INS	COG6	ENST00000465775	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	COG6	HGNC	ENSG00000133103	tier1			41	0	0.00	29	11	27.50
COL11A1	0	genome.wustl.edu	37	1	103352579	103352579	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	103352579	103352579	T	A	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.4678	p.I1560F	0.999	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	155	0	0.00	65	23	26.14
COL12A1	0	genome.wustl.edu	37	6	75890837	75890838	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	75890837	75890838	-	A	INS	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	frame_shift_ins	c.1982_1981	p.S661fs	1.000:0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1			54	0	0.00	38	17	30.91
COX7A2L	0	genome.wustl.edu	37	2	42578274	42578275	+	RNA	INS	-	-	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	42578274	42578275	-	A	INS	COX7A2L	ENST00000482463	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.000	-	-	-	no_errors	COX7A2L	HGNC	ENSG00000115944	tier1			15	0	0.00	5	2	28.57
CPSF1	0	genome.wustl.edu	37	8	145622114	145622114	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	145622114	145622114	C	A	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	nonsense	c.2623	p.E875*	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894	tier1	-	-	54	0	0.00	27	9	25.00
CRB3	0	genome.wustl.edu	37	19	6466662	6466662	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	6466662	6466662	G	-	DEL	CRB3	ENST00000308243	human	ensembl	74_37	+1	known	frame_shift_del	c.342	p.P115fs	0.900	NULL	NULL	-	no_errors	CRB3	HGNC	ENSG00000130545	tier1			53	0	0.00	15	2	11.76
CSMD3	0	genome.wustl.edu	37	8	113933896	113933896	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	113933896	113933896	T	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.1593	p.E531D	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	113	0	0.00	75	44	36.97
CST8	0	genome.wustl.edu	37	20	23473666	23473666	+	Silent	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	23473666	23473666	T	G	SNP	CST8	ENST00000246012	human	ensembl	74_37	+1	known	silent	c.303	p.T101	0.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST8	HGNC	ENSG00000125815	tier1	-	-	217	0	0.00	123	11	8.21
CTNNA2	0	genome.wustl.edu	37	2	80831299	80831299	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	80831299	80831299	G	T	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.2392	p.D798Y	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Vinculin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	tier1	-	-	82	0	0.00	33	7	17.50
DIRAS1	0	genome.wustl.edu	37	19	2717373	2717373	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	2717373	2717373	G	A	SNP	DIRAS1	ENST00000323469	human	ensembl	74_37	-1	known	silent	c.432	p.C144	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS1	HGNC	ENSG00000176490	tier1	-	-	173	0	0.00	81	33	28.95
DLGAP1	0	genome.wustl.edu	37	18	3534261	3534261	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	3534261	3534261	G	A	SNP	DLGAP1	ENST00000315677	human	ensembl	74_37	-1	known	nonsense	c.2410	p.R804*	0.999	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579	tier1	-	-	119	0	0.00	123	17	12.14
DLX5	0	genome.wustl.edu	37	7	96651624	96651624	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	96651624	96651624	C	T	SNP	DLX5	ENST00000222598	human	ensembl	74_37	-1	known	missense	c.413	p.R138H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Distal-less_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX5	HGNC	ENSG00000105880	tier1	-	-	183	0	0.00	118	14	10.53
DNAJC16	0	genome.wustl.edu	37	1	15886050	15886050	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	15886050	15886050	C	T	SNP	DNAJC16	ENST00000375847	human	ensembl	74_37	+1	known	silent	c.1053	p.D351	0.104	NULL	pfam_DnaJ_domain,pfam_Thioredoxin_domain,superfamily_DnaJ_domain,superfamily_Thioredoxin-like_fold,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC16	HGNC	ENSG00000116138	tier1	-	-	211	0	0.00	170	14	7.61
DUSP9	0	genome.wustl.edu	37	X	152914821	152914821	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	X	152914821	152914821	G	A	SNP	DUSP9	ENST00000342782	human	ensembl	74_37	+1	known	missense	c.508	p.D170N	0.999	pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP9	HGNC	ENSG00000130829	tier1	-	-	45	0	0.00	14	6	30.00
DVL1	0	genome.wustl.edu	37	1	1274026	1274026	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	1274026	1274026	T	-	DEL	DVL1	ENST00000378888	human	ensembl	74_37	-1	known	frame_shift_del	c.1215	p.E406fs	0.843	NULL	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_fam	-	no_errors	DVL1	HGNC	ENSG00000107404	tier1			52	0	0.00	18	2	10.00
ECEL1	0	genome.wustl.edu	37	2	233348908	233348908	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	233348908	233348908	G	A	SNP	ECEL1	ENST00000304546	human	ensembl	74_37	-1	known	missense	c.1210	p.R404C	1.000	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	ECEL1	HGNC	ENSG00000171551	tier1	-	-	50	0	0.00	33	6	15.38
EDIL3	0	genome.wustl.edu	37	5	83680162	83680162	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	83680162	83680162	C	A	SNP	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	missense	c.31	p.V11F	0.021	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176	tier1	-	-	181	0	0.00	44	30	40.00
EIF4G1	0	genome.wustl.edu	37	3	184039582	184039582	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	184039582	184039582	C	T	SNP	EIF4G1	ENST00000352767	human	ensembl	74_37	+1	known	missense	c.1231	p.L411F	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G1	HGNC	ENSG00000114867	tier1	-	-	422	0	0.00	279	61	17.94
ENPEP	0	genome.wustl.edu	37	4	111397617	111397617	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	111397617	111397617	C	T	SNP	ENPEP	ENST00000265162	human	ensembl	74_37	+1	known	missense	c.47	p.T16M	0.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792	tier1	-	-	212	0	0.00	130	14	9.72
ENSG00000187812	0	genome.wustl.edu	37	15	76073330	76073330	+	RNA	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	76073330	76073330	G	A	SNP	ENSG00000187812	ENST00000395215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-24M17.5	Clone_based_vega_gene	ENSG00000187812	tier1	-	-	118	0	0.00	62	7	10.14
ENSG00000224666	0	genome.wustl.edu	37	6	36359698	36359698	+	RNA	DEL	A	A	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	36359698	36359698	A	-	DEL	ENSG00000224666	ENST00000411643	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP1-50J22.4	Clone_based_vega_gene	ENSG00000224666	tier1			25	0	0.00	11	2	15.38
ENSG00000258851	0	genome.wustl.edu	37	14	104028197	104028197	+	RNA	DEL	A	A	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	104028197	104028197	A	-	DEL	ENSG00000258851	ENST00000556332	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-894P9.2	Clone_based_vega_gene	ENSG00000258851	tier1			36	0	0.00	21	2	8.70
ENSG00000266283	0	genome.wustl.edu	37	18	19780588	19780588	+	RNA	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	19780588	19780588	G	A	SNP	ENSG00000266283	ENST00000583442	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-627G18.1	Clone_based_vega_gene	ENSG00000266283	tier1	-	-	209	0	0.00	249	136	35.32
EPHA6	0	genome.wustl.edu	37	3	97466293	97466293	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	97466293	97466293	C	T	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	missense	c.3155	p.P1052L	0.848	superfamily_SAM/pointed,smart_SAM	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224	tier1	-	-	15	0	0.00	6	8	57.14
EPHB1	0	genome.wustl.edu	37	3	134967263	134967263	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	134967263	134967263	C	T	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.2602	p.R868W	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	93	0	0.00	46	14	23.33
EXD1	0	genome.wustl.edu	37	15	41476611	41476611	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	41476611	41476611	A	T	SNP	EXD1	ENST00000314992	human	ensembl	74_37	-1	known	missense	c.1063	p.L355I	0.000	NULL	pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD1	HGNC	ENSG00000178997	tier1	-	-	186	0	0.00	145	16	9.94
FABP9	0	genome.wustl.edu	37	8	82371457	82371457	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	82371457	82371457	G	A	SNP	FABP9	ENST00000379071	human	ensembl	74_37	-1	known	silent	c.189	p.I63	1.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	FABP9	HGNC	ENSG00000205186	tier1	-	-	189	0	0.00	172	18	9.47
FAM65C	0	genome.wustl.edu	37	20	49211914	49211914	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	49211914	49211914	A	G	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	missense	c.2042	p.I681T	0.046	NULL	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1	-	-	252	0	0.00	177	14	7.33
FHOD3	0	genome.wustl.edu	37	18	34340742	34340742	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	34340742	34340742	C	T	SNP	FHOD3	ENST00000257209	human	ensembl	74_37	+1	known	nonsense	c.4072	p.R1358*	1.000	NULL	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775	tier1	-	-	61	0	0.00	1	9	90.00
FLRT2	0	genome.wustl.edu	37	14	86088495	86088495	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	86088495	86088495	G	A	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	missense	c.637	p.G213R	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070	tier1	-	-	145	0	0.00	89	46	34.07
FMNL2	0	genome.wustl.edu	37	2	153493045	153493045	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	153493045	153493045	T	-	DEL	FMNL2	ENST00000288670	human	ensembl	74_37	+1	known	frame_shift_del	c.2785	p.F929fs	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin,prints_Wilms_tumour	-	no_errors	FMNL2	HGNC	ENSG00000157827	tier1			18	0	0.00	4	2	33.33
FOCAD	0	genome.wustl.edu	37	9	20866978	20866978	+	Silent	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	20866978	20866978	A	T	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	silent	c.2157	p.A719	0.031	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352	tier1	-	-	174	0	0.00	98	6	5.77
FOSB	0	genome.wustl.edu	37	19	45974160	45974160	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	45974160	45974160	C	T	SNP	FOSB	ENST00000353609	human	ensembl	74_37	+1	known	missense	c.400	p.P134S	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	FOSB	HGNC	ENSG00000125740				117	0	0.00	56	6	9.68
GABRB1	0	genome.wustl.edu	37	4	47405441	47405441	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	47405441	47405441	G	C	SNP	GABRB1	ENST00000295454	human	ensembl	74_37	+1	known	missense	c.651	p.K217N	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB1	HGNC	ENSG00000163288	tier1	-	-	72	0	0.00	54	7	11.48
GAL3ST3	0	genome.wustl.edu	37	11	65810784	65810784	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	65810784	65810784	A	G	SNP	GAL3ST3	ENST00000312006	human	ensembl	74_37	-1	known	missense	c.490	p.Y164H	1.000	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST3	HGNC	ENSG00000175229	tier1	-	-	46	0	0.00	2	4	66.67
GP2	0	genome.wustl.edu	37	16	20328576	20328576	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	20328576	20328576	C	T	SNP	GP2	ENST00000381362	human	ensembl	74_37	-1	known	missense	c.1384	p.E462K	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	GP2	HGNC	ENSG00000169347	tier1	-	-	71	0	0.00	49	18	26.87
GPR45	0	genome.wustl.edu	37	2	105858915	105858915	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	105858915	105858915	G	-	DEL	GPR45	ENST00000258456	human	ensembl	74_37	+1	known	frame_shift_del	c.600	p.V201fs	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR45	HGNC	ENSG00000135973	tier1			37	0	0.00	9	2	18.18
GPR55	0	genome.wustl.edu	37	2	231775046	231775046	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	231775046	231775046	C	T	SNP	GPR55	ENST00000392039	human	ensembl	74_37	-1	known	missense	c.632	p.R211H	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR55	HGNC	ENSG00000135898	tier1	-	-	125	0	0.00	70	7	9.09
HIP1R	0	genome.wustl.edu	37	12	123335393	123335394	+	Frame_Shift_Ins	INS	-	-	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	123335393	123335394	-	C	INS	HIP1R	ENST00000253083	human	ensembl	74_37	+1	known	frame_shift_ins	c.450_451	p.A151fs	1.000:1.000	pfam_ANTH_dom,smart_Epsin-like_N,pfscan_Epsin-like_N	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1R	HGNC	ENSG00000130787	tier1			52	0	0.00	15	2	11.76
HIST1H2BO	0	genome.wustl.edu	37	6	27861305	27861305	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	27861305	27861305	C	G	SNP	HIST1H2BO	ENST00000303806	human	ensembl	74_37	+1	known	missense	c.65	p.A22G	1.000	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BO	HGNC	ENSG00000196331	tier1	-	-	108	0	0.00	91	10	9.90
HMHA1	0	genome.wustl.edu	37	19	1073509	1073509	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	1073509	1073509	C	T	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	silent	c.570	p.F190	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448	tier1	-	-	51	0	0.00	36	12	25.00
HS3ST3B1	0	genome.wustl.edu	37	17	14248369	14248369	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	14248369	14248369	C	T	SNP	HS3ST3B1	ENST00000360954	human	ensembl	74_37	+1	known	silent	c.579	p.D193	0.071	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST3B1	HGNC	ENSG00000125430	tier1	-	-	76	0	0.00	40	9	18.00
HSPA8	0	genome.wustl.edu	37	11	122929368	122929368	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	122929368	122929368	C	G	SNP	HSPA8	ENST00000534624	human	ensembl	74_37	-1	known	missense	c.1494	p.E498D	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA8	HGNC	ENSG00000109971	tier1	-	-	122	0	0.00	63	36	36.36
HYDIN	0	genome.wustl.edu	37	16	70867965	70867965	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	70867965	70867965	C	T	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.13504	p.E4502K	0.999	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	84	0	0.00	47	6	11.32
ICK	0	genome.wustl.edu	37	6	52884073	52884073	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	52884073	52884073	C	T	SNP	ICK	ENST00000350082	human	ensembl	74_37	-1	known	missense	c.443	p.R148Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ICK	HGNC	ENSG00000112144	tier1	-	-	56	0	0.00	49	6	10.91
IFT172	0	genome.wustl.edu	37	2	27677454	27677454	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	27677454	27677454	C	A	SNP	IFT172	ENST00000260570	human	ensembl	74_37	-1	known	missense	c.3445	p.A1149S	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat	-	no_errors	IFT172	HGNC	ENSG00000138002	tier1	-	-	95	0	0.00	69	15	17.86
IKBIP	0	genome.wustl.edu	37	12	99007735	99007735	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	99007735	99007735	C	T	SNP	IKBIP	ENST00000342502	human	ensembl	74_37	-1	known	silent	c.681	p.T227	0.025	NULL	NULL	-	no_errors	IKBIP	HGNC	ENSG00000166130	tier1	-	-	75	0	0.00	15	22	59.46
INPP4A	0	genome.wustl.edu	37	2	99169332	99169332	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	99169332	99169332	T	C	SNP	INPP4A	ENST00000074304	human	ensembl	74_37	+1	known	missense	c.1262	p.L421P	1.000	NULL	superfamily_C2_dom	-	no_errors	INPP4A	HGNC	ENSG00000040933	tier1	-	-	33	0	0.00	22	4	15.38
KCNA3	0	genome.wustl.edu	37	1	111216188	111216188	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	111216188	111216188	G	A	SNP	KCNA3	ENST00000369769	human	ensembl	74_37	-1	known	missense	c.1244	p.A415V	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.3,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA3	HGNC	ENSG00000177272	tier1	-	-	62	0	0.00	39	11	22.00
KCNH8	0	genome.wustl.edu	37	3	19479730	19479730	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	19479730	19479730	C	T	SNP	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	nonsense	c.1252	p.R418*	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960	tier1	-	-	201	0	0.00	73	78	51.66
KCNT2	0	genome.wustl.edu	37	1	196254881	196254881	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	196254881	196254881	C	T	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.2603	p.R868Q	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	32	0	0.00	18	12	40.00
KIF21B	0	genome.wustl.edu	37	1	200968548	200968548	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	200968548	200968548	C	T	SNP	KIF21B	ENST00000422435	human	ensembl	74_37	-1	known	missense	c.1814	p.R605H	0.105	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21B	HGNC	ENSG00000116852	tier1	rs147761216	-	141	0	0.00	112	10	8.20
KRTAP10-1	0	genome.wustl.edu	37	21	45959607	45959607	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	21	45959607	45959607	C	T	SNP	KRTAP10-1	ENST00000400375	human	ensembl	74_37	-1	known	missense	c.427	p.V143M	0.197	NULL	NULL	-	no_errors	KRTAP10-1	HGNC	ENSG00000215455	tier1	-	-	223	0	0.00	138	14	9.21
KRTAP21-1	0	genome.wustl.edu	37	21	32127676	32127676	+	Silent	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	21	32127676	32127676	G	T	SNP	KRTAP21-1	ENST00000335093	human	ensembl	74_37	-1	known	silent	c.21	p.G7	0.559	NULL	NULL	-	no_errors	KRTAP21-1	HGNC	ENSG00000187005	tier1	-	-	252	0	0.00	142	63	30.73
LAMA5	0	genome.wustl.edu	37	20	60909037	60909037	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	60909037	60909037	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.2798	p.R933Q	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	48	0	0.00	34	7	17.07
LPIN1	0	genome.wustl.edu	37	2	11907974	11907974	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	11907974	11907974	A	T	SNP	LPIN1	ENST00000449576	human	ensembl	74_37	+1	known	missense	c.425	p.D142V	1.000	pfam_Lipin_N	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,superfamily_WD40_repeat_dom,smart_LNS2	-	no_errors	LPIN1	HGNC	ENSG00000134324				67	0	0.00	38	4	9.52
LRP5	0	genome.wustl.edu	37	11	68193553	68193553	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	68193553	68193553	C	T	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	missense	c.3535	p.R1179C	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,smart_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337	tier1	-	-	181	0	0.00	129	23	15.13
LRRC16B	0	genome.wustl.edu	37	14	24535653	24535653	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	24535653	24535653	G	A	SNP	LRRC16B	ENST00000342740	human	ensembl	74_37	+1	known	missense	c.3572	p.R1191Q	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	tier1	-	-	268	0	0.00	143	47	24.74
MCM3	0	genome.wustl.edu	37	6	52142412	52142412	+	Silent	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	52142412	52142412	G	C	SNP	MCM3	ENST00000596288	human	ensembl	74_37	-1	known	silent	c.1089	p.L363	0.984	pfam_MCM_DNA-dep_ATPase,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase,prints_Mcm3	-	no_errors	MCM3	HGNC	ENSG00000112118	tier1	-	-	133	0	0.00	78	19	19.59
ME3	0	genome.wustl.edu	37	11	86158190	86158190	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	86158190	86158190	G	A	SNP	ME3	ENST00000359636	human	ensembl	74_37	-1	known	missense	c.1297	p.H433Y	1.000	pfam_Malic_NAD-bd,smart_Malic_NAD-bd,prints_Malic_OxRdtase	pfam_Malic_NAD-bd,pfam_Malic_N,smart_Malic_NAD-bd,prints_Malic_OxRdtase	-	no_errors	ME3	HGNC	ENSG00000151376	tier1	-	-	105	0	0.00	50	11	18.03
METTL4	0	genome.wustl.edu	37	18	2566839	2566839	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	2566839	2566839	G	A	SNP	METTL4	ENST00000574538	human	ensembl	74_37	-1	known	missense	c.377	p.S126F	0.008	NULL	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL4	HGNC	ENSG00000101574	tier1	-	-	31	0	0.00	40	8	16.67
MISP	0	genome.wustl.edu	37	19	757997	757997	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	757997	757997	G	A	SNP	MISP	ENST00000215582	human	ensembl	74_37	+1	known	missense	c.1051	p.V351M	0.975	NULL	NULL	-	no_errors	MISP	HGNC	ENSG00000099812	tier1	-	-	43	0	0.00	7	8	53.33
MLLT6	0	genome.wustl.edu	37	17	36861913	36861914	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	36861913	36861914	-	T	INS	MLLT6	ENST00000325718	human	ensembl	74_37	+1	known	frame_shift_ins	c.28_29	p.C11fs	1.000:1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT6	HGNC	ENSG00000108292	tier1			177	0	0.00	84	38	31.15
MON1B	0	genome.wustl.edu	37	16	77227645	77227645	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	77227645	77227645	C	T	SNP	MON1B	ENST00000248248	human	ensembl	74_37	+1	known	missense	c.446	p.A149V	1.000	pfam_Vacuolar_fusion_protein_MON1	pfam_Vacuolar_fusion_protein_MON1,prints_Vacuolar_fusion_protein_MON1	-	no_errors	MON1B	HGNC	ENSG00000103111	tier1	rs200826983	-	92	0	0.00	49	20	28.99
MUC16	0	genome.wustl.edu	37	19	9074884	9074884	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	9074884	9074884	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.12562	p.P4188T	0.003	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	78	0	0.00	65	10	13.33
MUC20	0	genome.wustl.edu	37	3	195447886	195447886	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	195447886	195447886	G	C	SNP	MUC20	ENST00000447234	human	ensembl	74_37	+1	known	missense	c.8	p.C3S	0.629	NULL	NULL	-	no_errors	MUC20	HGNC	ENSG00000176945	tier1	rs7627924	-	11	0	0.00	3	5	62.50
MYADM	0	genome.wustl.edu	37	19	54377192	54377192	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	54377192	54377192	G	A	SNP	MYADM	ENST00000336967	human	ensembl	74_37	+1	known	missense	c.409	p.A137T	1.000	pfam_Marvel	pfam_Marvel	-	no_errors	MYADM	HGNC	ENSG00000179820	tier1	-	-	204	0	0.00	85	37	30.33
MYCT1	0	genome.wustl.edu	37	6	153042975	153042975	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	153042975	153042975	G	T	SNP	MYCT1	ENST00000367245	human	ensembl	74_37	+1	known	missense	c.295	p.A99S	1.000	NULL	NULL	-	no_errors	MYCT1	HGNC	ENSG00000120279	tier1	-	-	106	0	0.00	81	6	6.90
MYO3A	0	genome.wustl.edu	37	10	26462699	26462699	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	26462699	26462699	T	C	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.3506	p.F1169S	0.001	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777	tier1	-	-	55	0	0.00	39	4	9.30
NARG2	0	genome.wustl.edu	37	15	60734733	60734733	+	Silent	SNP	A	A	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	60734733	60734733	A	C	SNP	NARG2	ENST00000261520	human	ensembl	74_37	-1	known	silent	c.2307	p.V769	0.255	pfam_NARG2_C	pfam_NARG2_C	-	no_errors	NARG2	HGNC	ENSG00000128915	tier1	-	-	103	0	0.00	55	5	8.33
NBEA	0	genome.wustl.edu	37	13	35770201	35770201	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	35770201	35770201	G	A	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.5128	p.E1710K	0.999	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	66	0	0.00	57	14	19.72
NCKAP1	0	genome.wustl.edu	37	2	183792844	183792844	+	Splice_Site	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	183792844	183792844	C	G	SNP	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	splice_site	c.3198+1	e30+1	1.000	-	-	-	no_errors	NCKAP1	HGNC	ENSG00000061676				87	0	0.00	69	11	13.75
NCKAP1	0	genome.wustl.edu	37	2	183818060	183818060	+	Splice_Site	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	183818060	183818060	C	T	SNP	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	splice_site	c.2172-1	e22-1	1.000	-	-	-	no_errors	NCKAP1	HGNC	ENSG00000061676				44	0	0.00	50	12	19.35
NDC80	0	genome.wustl.edu	37	18	2578995	2578995	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	2578995	2578995	G	A	SNP	NDC80	ENST00000261597	human	ensembl	74_37	+1	known	silent	c.546	p.V182	1.000	pfam_Kinetochore_Ndc80	pfam_Kinetochore_Ndc80,superfamily_t-SNARE	-	no_errors	NDC80	HGNC	ENSG00000080986	tier1	-	-	109	0	0.00	95	11	10.38
NEO1	0	genome.wustl.edu	37	15	73415025	73415025	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	73415025	73415025	G	A	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	missense	c.608	p.S203N	0.996	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141	tier1	-	-	145	0	0.00	101	6	5.61
NEO1	0	genome.wustl.edu	37	15	73562536	73562536	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	73562536	73562536	C	T	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	nonsense	c.2680	p.R894*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141	tier1	-	-	91	0	0.00	54	7	11.48
NFIB	0	genome.wustl.edu	37	9	14120531	14120531	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	14120531	14120531	G	A	SNP	NFIB	ENST00000397581	human	ensembl	74_37	-1	known	missense	c.1153	p.P385S	1.000	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIB	HGNC	ENSG00000147862	tier1	-	-	111	0	0.00	39	16	29.09
NPFFR2	0	genome.wustl.edu	37	4	72897735	72897735	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	72897735	72897735	C	T	SNP	NPFFR2	ENST00000308744	human	ensembl	74_37	+1	known	silent	c.117	p.R39	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPFF_rcpt_2,prints_NPFF_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPFFR2	HGNC	ENSG00000056291	tier1	-	-	103	0	0.00	29	8	21.62
NT5M	0	genome.wustl.edu	37	17	17207071	17207071	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	17207071	17207071	G	-	DEL	NT5M	ENST00000389022	human	ensembl	74_37	+1	known	frame_shift_del	c.207	p.E70fs	1.000	pfam_5'(3')-deoxyribonucleotidase,superfamily_HAD-like_dom	pfam_5'(3')-deoxyribonucleotidase,superfamily_HAD-like_dom	-	no_errors	NT5M	HGNC	ENSG00000205309	tier1			55	0	0.00	10	2	16.67
NTF3	0	genome.wustl.edu	37	12	5604101	5604101	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	5604101	5604101	C	T	SNP	NTF3	ENST00000423158	human	ensembl	74_37	+1	known	missense	c.760	p.R254W	1.000	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pirsf_Nerve_growth_factor-like,pfscan_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pirsf_Nerve_growth_factor-like,pfscan_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel,prints_Neurotrophin-3	-	no_errors	NTF3	HGNC	ENSG00000185652	tier1	-	-	48	0	0.00	41	5	10.87
OGFOD3	0	genome.wustl.edu	37	17	80352405	80352405	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	80352405	80352405	G	A	SNP	OGFOD3	ENST00000329197	human	ensembl	74_37	-1	known	missense	c.838	p.R280W	0.001	smart_Pro_4_hyd_alph	smart_Pro_4_hyd_alph	-	no_errors	OGFOD3	HGNC	ENSG00000181396	tier1	-	-	91	0	0.00	53	18	25.35
OR14I1	0	genome.wustl.edu	37	1	248845077	248845077	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	248845077	248845077	G	A	SNP	OR14I1	ENST00000342623	human	ensembl	74_37	-1	known	missense	c.529	p.R177C	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR14I1	HGNC	ENSG00000189181	tier1	rs141659105	-	55	0	0.00	49	4	7.55
OR6T1	0	genome.wustl.edu	37	11	123813782	123813782	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	123813782	123813782	G	T	SNP	OR6T1	ENST00000321252	human	ensembl	74_37	-1	known	missense	c.764	p.S255Y	0.962	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6T1	HGNC	ENSG00000181499	tier1	-	-	152	0	0.00	77	23	23.00
OR8J3	0	genome.wustl.edu	37	11	55904620	55904620	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	55904620	55904620	G	A	SNP	OR8J3	ENST00000301529	human	ensembl	74_37	-1	known	missense	c.575	p.T192I	0.962	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J3	HGNC	ENSG00000167822	tier1	-	-	78	0	0.00	80	13	13.98
OR9A4	0	genome.wustl.edu	37	7	141619580	141619580	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	141619580	141619580	G	A	SNP	OR9A4	ENST00000548136	human	ensembl	74_37	+1	known	missense	c.905	p.R302Q	0.002	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9A4	HGNC	ENSG00000258083	tier1	-	-	107	0	0.00	78	28	26.17
PACS2	0	genome.wustl.edu	37	14	105849775	105849775	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	105849775	105849775	C	T	SNP	PACS2	ENST00000458164	human	ensembl	74_37	+1	known	missense	c.1705	p.R569W	0.995	pfam_Phosphofurin_acidic_CS-1	pfam_Phosphofurin_acidic_CS-1	-	no_errors	PACS2	HGNC	ENSG00000179364	tier1	-	-	93	0	0.00	36	22	37.93
PAX3	0	genome.wustl.edu	37	2	223065899	223065899	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	223065899	223065899	C	A	SNP	PAX3	ENST00000392069	human	ensembl	74_37	-1	known	missense	c.1512	p.E504D	0.091	NULL	pfam_Paired_dom,pfam_Pax7,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX3	HGNC	ENSG00000135903	tier1	-	-	58	0	0.00	34	6	15.00
PCDHB6	0	genome.wustl.edu	37	5	140531355	140531355	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	140531355	140531355	C	T	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.1517	p.A506V	0.291	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211	tier1	-	-	251	0	0.00	67	81	54.73
PCDHGA2	0	genome.wustl.edu	37	5	140718743	140718743	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	140718743	140718743	A	0	DEL	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	frame_shift_del	c.205	p.R69fs	0.986	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853				122	0	0.00	102	9	8.11
PCDHGB1	0	genome.wustl.edu	37	5	140731511	140731511	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	140731511	140731511	G	A	SNP	PCDHGB1	ENST00000523390	human	ensembl	74_37	+1	known	missense	c.1684	p.A562T	0.080	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB1	HGNC	ENSG00000254221	tier1	-	-	125	0	0.00	20	11	35.48
PCDHGB3	0	genome.wustl.edu	37	5	140749978	140749978	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	140749978	140749978	G	T	SNP	PCDHGB3	ENST00000576222	human	ensembl	74_37	+1	known	missense	c.17	p.G6V	0.001	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	tier1	-	-	61	0	0.00	27	20	42.55
PDE7A	0	genome.wustl.edu	37	8	66647072	66647072	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	66647072	66647072	G	A	SNP	PDE7A	ENST00000401827	human	ensembl	74_37	-1	known	missense	c.653	p.A218V	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE7A	HGNC	ENSG00000205268	tier1	-	-	190	0	0.00	108	55	33.74
PGAP1	0	genome.wustl.edu	37	2	197712755	197712755	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	197712755	197712755	C	A	SNP	PGAP1	ENST00000354764	human	ensembl	74_37	-1	known	missense	c.1868	p.C623F	1.000	NULL	pfam_PGAP1-like	-	no_errors	PGAP1	HGNC	ENSG00000197121	tier1	-	-	73	0	0.00	45	12	21.05
PIK3R5	0	genome.wustl.edu	37	17	8793325	8793325	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	8793325	8793325	G	A	SNP	PIK3R5	ENST00000447110	human	ensembl	74_37	-1	known	missense	c.776	p.A259V	0.886	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R5	HGNC	ENSG00000141506	tier1	-	-	123	0	0.00	67	54	44.63
PLXNA2	0	genome.wustl.edu	37	1	208252769	208252769	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	208252769	208252769	G	A	SNP	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	missense	c.2422	p.R808W	1.000	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356	tier1	-	-	30	0	0.00	11	7	38.89
PLXNA4	0	genome.wustl.edu	37	7	131908334	131908334	+	Silent	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	131908334	131908334	A	G	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	silent	c.2049	p.H683	0.648	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866				52	0	0.00	20	4	16.67
PLXNB1	0	genome.wustl.edu	37	3	48452300	48452300	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	48452300	48452300	G	-	DEL	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	frame_shift_del	c.5393	p.P1798fs	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050	tier1			38	0	0.00	13	2	13.33
PNPLA7	0	genome.wustl.edu	37	9	140361819	140361819	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	140361819	140361819	C	T	SNP	PNPLA7	ENST00000406427	human	ensembl	74_37	-1	known	missense	c.2989	p.E997K	0.999	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653	tier1	-	-	95	0	0.00	48	8	14.29
PPIL2	0	genome.wustl.edu	37	22	22020391	22020391	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	22	22020391	22020391	G	-	DEL	PPIL2	ENST00000412327	human	ensembl	74_37	+1	known	frame_shift_del	c.3	p.K3fs	1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,pfam_Rtf2_RING-finger,superfamily_Cyclophilin-like_PPIase_dom,smart_Ubox_domain,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIL2	HGNC	ENSG00000100023	tier1			50	0	0.00	26	2	7.14
PRKCQ	0	genome.wustl.edu	37	10	6472807	6472807	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	6472807	6472807	G	A	SNP	PRKCQ	ENST00000263125	human	ensembl	74_37	-1	known	missense	c.1930	p.R644W	0.810	superfamily_Kinase-like_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675	tier1	-	-	108	0	0.00	52	12	18.75
PRKG1	0	genome.wustl.edu	37	10	54040664	54040664	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	54040664	54040664	C	T	SNP	PRKG1	ENST00000373980	human	ensembl	74_37	+1	known	silent	c.1519	p.L507	1.000	pirsf_cGMP-dependent_protein_kinase,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_cGMP-dependent_protein_kinase,pfam_Prot_kinase_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_dom	-	no_errors	PRKG1	HGNC	ENSG00000185532	tier1	-	-	128	0	0.00	92	18	16.36
PRODH	0	genome.wustl.edu	37	22	18907072	18907072	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	22	18907072	18907072	G	A	SNP	PRODH	ENST00000357068	human	ensembl	74_37	-1	known	silent	c.1143	p.A381	0.501	pfam_Proline_DH	pfam_Proline_DH	-	no_errors	PRODH	HGNC	ENSG00000100033	tier1	-	-	36	0	0.00	22	8	26.67
PRRT3	0	genome.wustl.edu	37	3	9990795	9990795	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	9990795	9990795	C	T	SNP	PRRT3	ENST00000295984	human	ensembl	74_37	-1	known	silent	c.1005	p.P335	0.001	NULL	NULL	-	no_errors	PRRT3	HGNC	ENSG00000163704	tier1	-	-	192	0	0.00	69	62	47.33
PSG9	0	genome.wustl.edu	37	19	43763168	43763168	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	43763168	43763168	C	T	SNP	PSG9	ENST00000270077	human	ensembl	74_37	-1	known	missense	c.829	p.G277S	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG9	HGNC	ENSG00000183668	tier1	-	-	460	0	0.00	277	129	31.77
PTPN21	0	genome.wustl.edu	37	14	88967137	88967137	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	88967137	88967137	C	T	SNP	PTPN21	ENST00000328736	human	ensembl	74_37	-1	known	missense	c.754	p.V252M	0.983	pfam_FERM_PH-like_C,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN21	HGNC	ENSG00000070778	tier1	-	-	111	0	0.00	76	14	15.56
PTPRO	0	genome.wustl.edu	37	12	15650271	15650271	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	15650271	15650271	A	G	SNP	PTPRO	ENST00000281171	human	ensembl	74_37	+1	known	missense	c.442	p.N148D	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRO	HGNC	ENSG00000151490	tier1	-	-	145	0	0.00	111	30	21.28
RBM18	0	genome.wustl.edu	37	9	125004304	125004304	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	125004304	125004304	T	-	DEL	RBM18	ENST00000417201	human	ensembl	74_37	-1	known	frame_shift_del	c.432	p.A145fs	0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM18	HGNC	ENSG00000119446	tier1			62	0	0.00	35	2	5.41
RGS18	0	genome.wustl.edu	37	1	192128414	192128414	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	192128414	192128414	C	T	SNP	RGS18	ENST00000367460	human	ensembl	74_37	+1	known	missense	c.184	p.R62C	0.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS18	HGNC	ENSG00000150681	tier1	rs139204070	-	69	0	0.00	31	13	29.55
RNF144A	0	genome.wustl.edu	37	2	7160699	7160699	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	7160699	7160699	G	A	SNP	RNF144A	ENST00000320892	human	ensembl	74_37	+1	known	missense	c.397	p.V133M	1.000	pfam_Znf_C6HC,smart_Znf_C6HC	pfam_Znf_C6HC,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF144A	HGNC	ENSG00000151692	tier1	-	-	148	0	0.00	123	10	7.52
RNF41	0	genome.wustl.edu	37	12	56607753	56607753	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	56607753	56607753	C	T	SNP	RNF41	ENST00000345093	human	ensembl	74_37	-1	known	missense	c.79	p.E27K	1.000	pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,smart_Znf_RING,pfscan_Znf_RING	pfam_USP8_interacting,pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,superfamily_TRAF-like,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	RNF41	HGNC	ENSG00000181852	tier1	-	-	195	0	0.00	88	54	38.03
RPAP1	0	genome.wustl.edu	37	15	41816139	41816139	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	41816139	41816139	G	T	SNP	RPAP1	ENST00000304330	human	ensembl	74_37	-1	known	missense	c.2266	p.P756T	0.069	NULL	pfam_RNA_pol_II_AP1_C,pfam_RNA_pol_II_AP1_N,superfamily_ARM-type_fold	-	no_errors	RPAP1	HGNC	ENSG00000103932	tier1	-	-	35	0	0.00	17	4	19.05
RPE65	0	genome.wustl.edu	37	1	68895557	68895557	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	68895557	68895557	G	A	SNP	RPE65	ENST00000262340	human	ensembl	74_37	-1	known	missense	c.1504	p.L502F	1.000	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	RPE65	HGNC	ENSG00000116745	tier1	-	-	83	0	0.00	63	10	13.70
RTN1	0	genome.wustl.edu	37	14	60072171	60072171	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	60072171	60072171	G	A	SNP	RTN1	ENST00000267484	human	ensembl	74_37	-1	known	missense	c.2027	p.T676M	1.000	pfam_Reticulon,pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN1	HGNC	ENSG00000139970	tier1	rs201164896	-	71	0	0.00	63	8	11.27
SAMD9	0	genome.wustl.edu	37	7	92731760	92731760	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	92731760	92731760	A	-	DEL	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	frame_shift_del	c.3651	p.F1217fs	0.850	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	tier1			99	0	0.00	84	12	12.50
SCAF4	0	genome.wustl.edu	37	21	33076196	33076196	+	Nonsense_Mutation	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	21	33076196	33076196	G	C	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	nonsense	c.203	p.S68*	1.000	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_CID_dom	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304	tier1	-	-	107	0	0.00	41	21	33.33
SCN5A	0	genome.wustl.edu	37	3	38597190	38597190	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	38597190	38597190	T	G	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.4499	p.K1500T	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873	tier1	-	-	114	0	0.00	33	34	50.75
SDK1	0	genome.wustl.edu	37	7	4107518	4107518	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	4107518	4107518	C	A	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.2960	p.S987Y	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555	tier1	-	-	27	0	0.00	41	7	14.58
SKI	0	genome.wustl.edu	37	1	2160478	2160478	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	2160478	2160478	C	T	SNP	SKI	ENST00000378536	human	ensembl	74_37	+1	known	silent	c.273	p.F91	1.000	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_c-SKI_SMAD4-bd_dom,pfam_Transform_Ski,superfamily_SAND_dom-like,superfamily_DNA-bd_dom_put	-	no_errors	SKI	HGNC	ENSG00000157933	tier1	-	-	27	0	0.00	19	8	29.63
SLC38A7	0	genome.wustl.edu	37	16	58709932	58709934	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	58709932	58709934	GAA	-	DEL	SLC38A7	ENST00000219320	human	ensembl	74_37	-1	known	in_frame_del	c.795_793	p.F265in_frame_del	1.000:1.000:1.000	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	-	no_errors	SLC38A7	HGNC	ENSG00000103042	tier1			30	0	0.00	28	5	15.15
SLC6A15	0	genome.wustl.edu	37	12	85285644	85285644	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	85285644	85285644	G	A	SNP	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	nonsense	c.256	p.R86*	0.993	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041	tier1	-	-	122	0	0.00	20	37	64.91
SLCO5A1	0	genome.wustl.edu	37	8	70744273	70744273	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	70744273	70744273	G	A	SNP	SLCO5A1	ENST00000260126	human	ensembl	74_37	-1	known	silent	c.636	p.F212	0.963	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571	tier1	-	-	40	0	0.00	14	7	33.33
SLITRK1	0	genome.wustl.edu	37	13	84454576	84454576	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	84454576	84454576	T	G	SNP	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	missense	c.1067	p.K356T	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235	tier1	-	-	122	0	0.00	110	18	14.06
SLITRK5	0	genome.wustl.edu	37	13	88328837	88328837	+	Silent	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	88328837	88328837	C	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	silent	c.1194	p.I398	0.982	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	tier1	-	-	73	0	0.00	64	13	16.88
SMARCA4	0	genome.wustl.edu	37	19	11144113	11144113	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	11144113	11144113	G	A	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3694	p.G1232S	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	208	0	0.00	113	56	32.94
SNORA38	0	genome.wustl.edu	37	6	31590899	31590899	+	RNA	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	31590899	31590899	G	A	SNP	SNORA38	ENST00000363946	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORA38	HGNC	ENSG00000200816	tier1	-	-	240	0	0.00	136	17	11.11
SORL1	0	genome.wustl.edu	37	11	121448047	121448047	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	121448047	121448047	C	T	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.3518	p.S1173F	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	tier1	-	-	120	0	0.00	58	41	41.41
SOS1	0	genome.wustl.edu	37	2	39278343	39278343	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	39278343	39278343	A	T	SNP	SOS1	ENST00000402219	human	ensembl	74_37	-1	known	missense	c.806	p.M269K	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS1	HGNC	ENSG00000115904	tier1	-	-	95	0	0.00	76	16	17.39
SSPO	0	genome.wustl.edu	37	7	149523267	149523267	+	RNA	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	149523267	149523267	A	G	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.321	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	103	0	0.00	39	23	37.10
ST18	0	genome.wustl.edu	37	8	53073985	53073985	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	53073985	53073985	C	T	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	missense	c.1544	p.R515H	0.999	pfam_Myelin_TF	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488	tier1	-	-	178	0	0.00	125	11	8.09
SYCP1	0	genome.wustl.edu	37	1	115537515	115537515	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	115537515	115537515	C	G	SNP	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	missense	c.2806	p.L936V	0.640	NULL	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765	tier1	-	-	113	0	0.00	76	20	20.83
TACR3	0	genome.wustl.edu	37	4	104577407	104577407	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	104577407	104577407	C	A	SNP	TACR3	ENST00000304883	human	ensembl	74_37	-1	known	nonsense	c.832	p.E278*	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NK3_rcpt,prints_Neurokn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NK3_rcpt,prints_Neurokn_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NK1_rcpt	-	no_errors	TACR3	HGNC	ENSG00000169836	tier1	-	-	123	0	0.00	41	39	48.15
TENM2	0	genome.wustl.edu	37	5	167627103	167627103	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	167627103	167627103	G	A	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.3397	p.G1133S	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	36	0	0.00	10	12	54.55
TESK2	0	genome.wustl.edu	37	1	45810644	45810644	+	Silent	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	45810644	45810644	G	T	SNP	TESK2	ENST00000372086	human	ensembl	74_37	-1	known	silent	c.1584	p.P528	0.959	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK2	HGNC	ENSG00000070759	tier1	-	-	201	0	0.00	99	55	35.71
TESK2	0	genome.wustl.edu	37	1	45811150	45811150	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	45811150	45811150	G	A	SNP	TESK2	ENST00000372086	human	ensembl	74_37	-1	known	missense	c.1078	p.R360C	1.000	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK2	HGNC	ENSG00000070759	tier1	-	-	62	0	0.00	32	21	39.62
THSD7B	0	genome.wustl.edu	37	2	138169429	138169429	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	138169429	138169429	C	A	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	missense	c.2946	p.F982L	0.991	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	tier1	-	-	35	0	0.00	26	7	21.21
TNFSF15	0	genome.wustl.edu	37	9	117553091	117553091	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	117553091	117553091	T	G	SNP	TNFSF15	ENST00000374045	human	ensembl	74_37	-1	known	missense	c.397	p.N133H	1.000	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom,prints_TNF	-	no_errors	TNFSF15	HGNC	ENSG00000181634	tier1	-	-	102	0	0.00	69	5	6.76
TNXB	0	genome.wustl.edu	37	6	32011597	32011597	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	32011597	32011597	C	G	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.11453	p.R3818P	0.024	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	272	0	0.00	156	10	6.02
TP53	0	genome.wustl.edu	37	17	7577539	7577539	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	7577539	7577539	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.742	p.R248W	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs121912651	-	135	0	0.00	79	16	16.84
TRAK2	0	genome.wustl.edu	37	2	202259577	202259577	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	202259577	202259577	C	T	SNP	TRAK2	ENST00000332624	human	ensembl	74_37	-1	known	missense	c.919	p.E307K	1.000	pfam_HAP1_N	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK2	HGNC	ENSG00000115993	tier1	-	-	50	0	0.00	24	6	20.00
TRAK2	0	genome.wustl.edu	37	2	202260143	202260143	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	202260143	202260143	C	G	SNP	TRAK2	ENST00000332624	human	ensembl	74_37	-1	known	missense	c.794	p.R265T	0.834	pfam_HAP1_N	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK2	HGNC	ENSG00000115993	tier1	-	-	195	0	0.00	110	22	16.67
TRIM32	0	genome.wustl.edu	37	9	119461125	119461125	+	Silent	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	119461125	119461125	A	T	SNP	TRIM32	ENST00000373983	human	ensembl	74_37	+1	known	silent	c.1104	p.P368	0.937	pfscan_NHL_repeat_subgr	pfam_NHL_repeat,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM32	HGNC	ENSG00000119401	tier1	-	-	148	0	0.00	72	10	12.20
TRIML2	0	genome.wustl.edu	37	4	189020199	189020199	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	189020199	189020199	G	A	SNP	TRIML2	ENST00000512729	human	ensembl	74_37	-1	known	missense	c.461	p.A154V	0.000	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	TRIML2	HGNC	ENSG00000179046	tier1	-	-	88	0	0.00	57	8	12.31
TRPA1	0	genome.wustl.edu	37	8	72984022	72984022	+	Silent	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	72984022	72984022	G	T	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	silent	c.192	p.T64	0.002	NULL	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1	-	-	41	0	0.00	28	11	28.21
TRPM4	0	genome.wustl.edu	37	19	49686058	49686058	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	49686058	49686058	C	T	SNP	TRPM4	ENST00000252826	human	ensembl	74_37	+1	known	missense	c.1487	p.A496V	0.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM4	HGNC	ENSG00000130529	tier1	-	-	44	0	0.00	23	7	23.33
TTN	0	genome.wustl.edu	37	2	179401240	179401240	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	179401240	179401240	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.92530	p.A30844T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	131	0	0.00	60	17	22.08
TTN	0	genome.wustl.edu	37	2	179485078	179485078	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	179485078	179485078	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.38466	p.P12822	0.761	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	149	0	0.00	111	29	20.71
TTN	0	genome.wustl.edu	37	2	179656861	179656861	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	179656861	179656861	C	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.1600	p.E534Q	1.000	pfam_Titin_Z,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	50	0	0.00	30	4	11.76
UNC5C	0	genome.wustl.edu	37	4	96091390	96091390	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	96091390	96091390	G	A	SNP	UNC5C	ENST00000453304	human	ensembl	74_37	-1	known	missense	c.2545	p.R849W	1.000	superfamily_DEATH-like_dom,smart_Death_domain	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5C	HGNC	ENSG00000182168	tier1	-	-	398	0	0.00	214	32	13.01
VPS13C	0	genome.wustl.edu	37	15	62302673	62302673	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	62302673	62302673	G	C	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.1009	p.Q337E	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	148	0	0.00	77	23	23.00
ZBTB6	0	genome.wustl.edu	37	9	125673768	125673768	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	125673768	125673768	G	A	SNP	ZBTB6	ENST00000373659	human	ensembl	74_37	-1	known	missense	c.584	p.S195L	1.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB6	HGNC	ENSG00000186130	tier1	-	-	66	0	0.00	39	7	15.22
ZC3H12A	0	genome.wustl.edu	37	1	37948666	37948666	+	Silent	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	37948666	37948666	A	G	SNP	ZC3H12A	ENST00000373087	human	ensembl	74_37	+1	known	silent	c.1254	p.T418	0.000	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12A	HGNC	ENSG00000163874	tier1	-	-	18	0	0.00	10	4	28.57
ZFP2	0	genome.wustl.edu	37	5	178359223	178359223	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	178359223	178359223	C	T	SNP	ZFP2	ENST00000361362	human	ensembl	74_37	+1	known	silent	c.909	p.C303	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP2	HGNC	ENSG00000198939				82	0	0.00	55	4	6.78
ZNF165	0	genome.wustl.edu	37	6	28056607	28056607	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	28056607	28056607	G	A	SNP	ZNF165	ENST00000377325	human	ensembl	74_37	+1	known	missense	c.817	p.D273N	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF165	HGNC	ENSG00000197279	tier1	-	-	62	0	0.00	27	14	34.15
ZNF180	0	genome.wustl.edu	37	19	44980912	44980912	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	44980912	44980912	G	A	SNP	ZNF180	ENST00000221327	human	ensembl	74_37	-1	known	nonsense	c.1786	p.Q596*	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF180	HGNC	ENSG00000167384	tier1	-	-	114	0	0.00	106	33	23.74
ZNF180	0	genome.wustl.edu	37	19	44980957	44980957	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	44980957	44980957	G	A	SNP	ZNF180	ENST00000221327	human	ensembl	74_37	-1	known	nonsense	c.1741	p.Q581*	0.170	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF180	HGNC	ENSG00000167384	tier1	-	-	108	0	0.00	101	23	18.55
ZNF384	0	genome.wustl.edu	37	12	6778309	6778309	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	6778309	6778309	T	C	SNP	ZNF384	ENST00000361959	human	ensembl	74_37	-1	known	missense	c.1220	p.N407S	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF384	HGNC	ENSG00000126746	tier1	-	-	59	0	0.00	75	7	8.33
ZNF423	0	genome.wustl.edu	37	16	49669727	49669727	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	49669727	49669727	G	A	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	silent	c.3336	p.P1112	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935	tier1	-	-	98	0	0.00	13	5	27.78
ZNF558	0	genome.wustl.edu	37	19	8922235	8922235	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	8922235	8922235	C	T	SNP	ZNF558	ENST00000301475	human	ensembl	74_37	-1	known	missense	c.931	p.V311I	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF558	HGNC	ENSG00000167785	tier1	-	-	119	0	0.00	59	27	31.40
ZNF559	0	genome.wustl.edu	37	19	9452409	9452409	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	9452409	9452409	C	G	SNP	ZNF559	ENST00000393883	human	ensembl	74_37	+1	known	missense	c.282	p.N94K	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF559	HGNC	ENSG00000188321	tier1	-	-	100	0	0.00	59	22	27.16
ZNF648	0	genome.wustl.edu	37	1	182026796	182026796	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	182026796	182026796	G	A	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	missense	c.350	p.P117L	0.008	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930	tier1	-	-	130	0	0.00	95	7	6.86
ZNF92	0	genome.wustl.edu	37	7	64863705	64863705	+	Silent	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	64863705	64863705	A	G	SNP	ZNF92	ENST00000328747	human	ensembl	74_37	+1	known	silent	c.678	p.E226	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF92	HGNC	ENSG00000146757				49	0	0.00	26	2	7.14
ZRANB2	0	genome.wustl.edu	37	1	71536547	71536547	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	71536547	71536547	G	A	SNP	ZRANB2	ENST00000370920	human	ensembl	74_37	-1	known	missense	c.646	p.R216C	1.000	pirsf_UCP037956_Znf_RanB2	pfam_Znf_RanBP2,smart_Znf_RanBP2,pirsf_UCP037956_Znf_RanB2,pfscan_Znf_RanBP2	-	no_errors	ZRANB2	HGNC	ENSG00000132485	tier1	-	-	191	0	0.00	108	65	37.36
ZSCAN20	0	genome.wustl.edu	37	1	33956750	33956750	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	33956750	33956750	C	T	SNP	ZSCAN20	ENST00000361328	human	ensembl	74_37	+1	known	nonsense	c.892	p.Q298*	0.319	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_SANT/Myb,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN20	HGNC	ENSG00000121903	tier1	-	-	113	0	0.00	66	19	22.35
ZSWIM3	0	genome.wustl.edu	37	20	44506132	44506132	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	44506132	44506132	G	A	SNP	ZSWIM3	ENST00000255152	human	ensembl	74_37	+1	known	missense	c.935	p.R312Q	0.996	pfam_MULE_transposase_dom,pfam_Transposase	pfam_Znf_SWIM,pfam_MULE_transposase_dom,pfam_Transposase,smart_Znf_PMZ,pfscan_Znf_SWIM	-	no_errors	ZSWIM3	HGNC	ENSG00000132801	tier1	-	-	126	0	0.00	104	8	7.08
COL11A1	0	genome.wustl.edu	37	1	103352579	103352579	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	103352579	103352579	T	A	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.4678	p.I1560F	0.999	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718				140	0	0	54	19	26.0274
KCNA3	0	genome.wustl.edu	37	1	111216188	111216188	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	111216188	111216188	G	A	SNP	KCNA3	ENST00000369769	human	ensembl	74_37	-1	known	missense	c.1244	p.A415V	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.3,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA3	HGNC	ENSG00000177272				62	0	0	37	11	22.9167
SYCP1	0	genome.wustl.edu	37	1	115537515	115537515	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	115537515	115537515	C	G	SNP	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	missense	c.2806	p.L936V	0.640	NULL	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765				97	0	0	59	16	21.3333
DNAJC16	0	genome.wustl.edu	37	1	15886050	15886050	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	15886050	15886050	C	T	SNP	DNAJC16	ENST00000375847	human	ensembl	74_37	+1	known	silent	c.1053	p.D351	0.104	NULL	pfam_DnaJ_domain,pfam_Thioredoxin_domain,superfamily_DnaJ_domain,superfamily_Thioredoxin-like_fold,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC16	HGNC	ENSG00000116138				185	0	0	151	13	7.92683
ZNF648	0	genome.wustl.edu	37	1	182026796	182026796	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	182026796	182026796	G	A	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	missense	c.350	p.P117L	0.008	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930				121	0	0	86	7	7.52688
RGS18	0	genome.wustl.edu	37	1	192128414	192128414	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	192128414	192128414	C	T	SNP	RGS18	ENST00000367460	human	ensembl	74_37	+1	known	missense	c.184	p.R62C	0.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS18	HGNC	ENSG00000150681				55	0	0	26	12	31.5789
KCNT2	0	genome.wustl.edu	37	1	196254881	196254881	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	196254881	196254881	C	T	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.2603	p.R868Q	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687				28	0	0	16	11	40.7407
KIF21B	0	genome.wustl.edu	37	1	200968548	200968548	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	200968548	200968548	C	T	SNP	KIF21B	ENST00000422435	human	ensembl	74_37	-1	known	missense	c.1814	p.R605H	0.105	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21B	HGNC	ENSG00000116852				131	0	0	106	10	8.62069
PLXNA2	0	genome.wustl.edu	37	1	208252769	208252769	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	208252769	208252769	G	A	SNP	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	missense	c.2422	p.R808W	1.000	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356				27	0	0	9	6	40
SKI	0	genome.wustl.edu	37	1	2160478	2160478	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	2160478	2160478	C	T	SNP	SKI	ENST00000378536	human	ensembl	74_37	+1	known	silent	c.273	p.F91	1.000	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_c-SKI_SMAD4-bd_dom,pfam_Transform_Ski,superfamily_SAND_dom-like,superfamily_DNA-bd_dom_put	-	no_errors	SKI	HGNC	ENSG00000157933				24	0	0	18	7	28
OR14I1	0	genome.wustl.edu	37	1	248845077	248845077	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	248845077	248845077	G	A	SNP	OR14I1	ENST00000342623	human	ensembl	74_37	-1	known	missense	c.529	p.R177C	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR14I1	HGNC	ENSG00000189181				53	0	0	45	3	6.25
ACTRT2	0	genome.wustl.edu	37	1	2938312	2938312	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	2938312	2938312	G	A	SNP	ACTRT2	ENST00000378404	human	ensembl	74_37	+1	known	missense	c.62	p.C21Y	0.998	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT2	HGNC	ENSG00000169717				70	0	0	33	14	29.7872
ZSCAN20	0	genome.wustl.edu	37	1	33956750	33956750	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	33956750	33956750	C	T	SNP	ZSCAN20	ENST00000361328	human	ensembl	74_37	+1	known	nonsense	c.892	p.Q298*	0.319	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_SANT/Myb,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN20	HGNC	ENSG00000121903				105	0	0	61	16	20.7792
TESK2	0	genome.wustl.edu	37	1	45810644	45810644	+	Silent	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	45810644	45810644	G	T	SNP	TESK2	ENST00000372086	human	ensembl	74_37	-1	known	silent	c.1584	p.P528	0.959	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK2	HGNC	ENSG00000070759				184	0	0	93	50	34.965
TESK2	0	genome.wustl.edu	37	1	45811150	45811150	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	45811150	45811150	G	A	SNP	TESK2	ENST00000372086	human	ensembl	74_37	-1	known	missense	c.1078	p.R360C	1.000	superfamily_Kinase-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK2	HGNC	ENSG00000070759				61	0	0	31	20	39.2157
RPE65	0	genome.wustl.edu	37	1	68895557	68895557	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	68895557	68895557	G	A	SNP	RPE65	ENST00000262340	human	ensembl	74_37	-1	known	missense	c.1504	p.L502F	1.000	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	RPE65	HGNC	ENSG00000116745				76	0	0	54	8	12.9032
ZRANB2	0	genome.wustl.edu	37	1	71536547	71536547	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	71536547	71536547	G	A	SNP	ZRANB2	ENST00000370920	human	ensembl	74_37	-1	known	missense	c.646	p.R216C	1.000	pirsf_UCP037956_Znf_RanB2	pfam_Znf_RanBP2,smart_Znf_RanBP2,pirsf_UCP037956_Znf_RanB2,pfscan_Znf_RanBP2	-	no_errors	ZRANB2	HGNC	ENSG00000132485				159	0	0	87	54	38.2979
ABLIM1	0	genome.wustl.edu	37	10	116245127	116245127	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	116245127	116245127	G	A	SNP	ABLIM1	ENST00000369266	human	ensembl	74_37	-1	known	missense	c.106	p.R36W	0.021	NULL	pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin_headpiece,pfscan_Villin_headpiece	-	no_errors	ABLIM1	HGNC	ENSG00000099204				33	0	0	22	3	12
MYO3A	0	genome.wustl.edu	37	10	26462699	26462699	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	26462699	26462699	T	C	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.3506	p.F1169S	0.001	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777				52	0	0	37	3	7.5
AKR1C1	0	genome.wustl.edu	37	10	5008192	5008192	+	Silent	SNP	T	T	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	5008192	5008192	T	C	SNP	AKR1C1	ENST00000380872	human	ensembl	74_37	+1	known	silent	c.171	p.N57	0.993	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1C1	HGNC	ENSG00000187134				95	0	0	53	6	10.1695
PRKG1	0	genome.wustl.edu	37	10	54040664	54040664	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	54040664	54040664	C	T	SNP	PRKG1	ENST00000373980	human	ensembl	74_37	+1	known	silent	c.1519	p.L507	1.000	pirsf_cGMP-dependent_protein_kinase,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_cGMP-dependent_protein_kinase,pfam_Prot_kinase_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_dom	-	no_errors	PRKG1	HGNC	ENSG00000185532				104	0	0	81	14	14.7368
CCDC6	0	genome.wustl.edu	37	10	61552820	61552820	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	61552820	61552820	G	A	SNP	CCDC6	ENST00000263102	human	ensembl	74_37	-1	known	missense	c.1280	p.T427M	1.000	NULL	pfam_DUF2046	-	no_errors	CCDC6	HGNC	ENSG00000108091				71	0	0	28	25	47.1698
PRKCQ	0	genome.wustl.edu	37	10	6472807	6472807	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	10	6472807	6472807	G	A	SNP	PRKCQ	ENST00000263125	human	ensembl	74_37	-1	known	missense	c.1930	p.R644W	0.810	superfamily_Kinase-like_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675				103	0	0	49	11	18.3333
SORL1	0	genome.wustl.edu	37	11	121448047	121448047	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	121448047	121448047	C	T	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.3518	p.S1173F	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642				107	0	0	53	37	41.1111
HSPA8	0	genome.wustl.edu	37	11	122929368	122929368	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	122929368	122929368	C	G	SNP	HSPA8	ENST00000534624	human	ensembl	74_37	-1	known	missense	c.1494	p.E498D	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA8	HGNC	ENSG00000109971				103	0	0	56	29	34.1176
OR6T1	0	genome.wustl.edu	37	11	123813782	123813782	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	123813782	123813782	G	T	SNP	OR6T1	ENST00000321252	human	ensembl	74_37	-1	known	missense	c.764	p.S255Y	0.962	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6T1	HGNC	ENSG00000181499				144	0	0	75	23	23.4694
OR8J3	0	genome.wustl.edu	37	11	55904620	55904620	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	55904620	55904620	G	A	SNP	OR8J3	ENST00000301529	human	ensembl	74_37	-1	known	missense	c.575	p.T192I	0.962	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J3	HGNC	ENSG00000167822				68	0	0	72	11	13.253
OR52E8	0	genome.wustl.edu	37	11	5878172	5878172	+	Nonsense_Mutation	SNP	A	A	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	5878172	5878172	A	C	SNP	OR52E8	ENST00000537935	human	ensembl	74_37	-1	known	nonsense	c.761	p.L254*	0.979	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52E8	HGNC	ENSG00000183269				105	0	0	71	4	5.33333
VPS51	0	genome.wustl.edu	37	11	64863869	64863869	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	64863869	64863869	G	A	SNP	VPS51	ENST00000279281	human	ensembl	74_37	+1	known	silent	c.147	p.A49	0.957	NULL	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_COG_su2_N,pfam_RZZ-complex_Zw10,superfamily_Cullin_repeat-like_dom	-	no_errors	VPS51	HGNC	ENSG00000149823				9	0	0	4	3	42.8571
LRP5	0	genome.wustl.edu	37	11	68193553	68193553	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	68193553	68193553	C	T	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	missense	c.3535	p.R1179C	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,smart_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337				159	0	0	110	21	16.0305
ME3	0	genome.wustl.edu	37	11	86158190	86158190	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	11	86158190	86158190	G	A	SNP	ME3	ENST00000359636	human	ensembl	74_37	-1	known	missense	c.1297	p.H433Y	1.000	pfam_Malic_NAD-bd,smart_Malic_NAD-bd,prints_Malic_OxRdtase	pfam_Malic_NAD-bd,pfam_Malic_N,smart_Malic_NAD-bd,prints_Malic_OxRdtase	-	no_errors	ME3	HGNC	ENSG00000151376				93	0	0	47	10	17.5439
PTPRO	0	genome.wustl.edu	37	12	15650271	15650271	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	15650271	15650271	A	G	SNP	PTPRO	ENST00000281171	human	ensembl	74_37	+1	known	missense	c.442	p.N148D	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRO	HGNC	ENSG00000151490				138	0	0	107	27	20.1493
NTF3	0	genome.wustl.edu	37	12	5604101	5604101	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	5604101	5604101	C	T	SNP	NTF3	ENST00000423158	human	ensembl	74_37	+1	known	missense	c.760	p.R254W	1.000	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pirsf_Nerve_growth_factor-like,pfscan_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pirsf_Nerve_growth_factor-like,pfscan_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel,prints_Neurotrophin-3	-	no_errors	NTF3	HGNC	ENSG00000185652				40	0	0	35	5	12.5
RNF41	0	genome.wustl.edu	37	12	56607753	56607753	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	56607753	56607753	C	T	SNP	RNF41	ENST00000345093	human	ensembl	74_37	-1	known	missense	c.79	p.E27K	1.000	pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,smart_Znf_RING,pfscan_Znf_RING	pfam_USP8_interacting,pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,superfamily_TRAF-like,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	RNF41	HGNC	ENSG00000181852				165	0	0	77	46	37.3984
ZNF384	0	genome.wustl.edu	37	12	6778309	6778309	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	6778309	6778309	T	C	SNP	ZNF384	ENST00000361959	human	ensembl	74_37	-1	known	missense	c.1220	p.N407S	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF384	HGNC	ENSG00000126746				56	0	0	65	7	9.72222
CLSTN3	0	genome.wustl.edu	37	12	7287991	7287991	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	7287991	7287991	G	A	SNP	CLSTN3	ENST00000266546	human	ensembl	74_37	+1	known	missense	c.452	p.R151H	0.906	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN3	HGNC	ENSG00000139182				105	0	0	67	30	30.9278
SLC6A15	0	genome.wustl.edu	37	12	85285644	85285644	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	85285644	85285644	G	A	SNP	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	nonsense	c.256	p.R86*	0.993	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041				104	0	0	20	32	61.5385
DUSP6	0	genome.wustl.edu	37	12	89744622	89744622	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	89744622	89744622	G	A	SNP	DUSP6	ENST00000279488	human	ensembl	74_37	-1	known	missense	c.581	p.S194L	0.997	pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP6	HGNC	ENSG00000139318				106	0	0	75	23	23.4694
IKBIP	0	genome.wustl.edu	37	12	99007735	99007735	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	12	99007735	99007735	C	T	SNP	IKBIP	ENST00000342502	human	ensembl	74_37	-1	known	silent	c.681	p.T227	0.025	NULL	NULL	-	no_errors	IKBIP	HGNC	ENSG00000166130				68	0	0	15	19	55.8824
BRCA2	0	genome.wustl.edu	37	13	32911836	32911836	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	32911836	32911836	C	T	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.3344	p.S1115F	1.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618				78	0	0	65	28	30.1075
NBEA	0	genome.wustl.edu	37	13	35770201	35770201	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	35770201	35770201	G	A	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.5128	p.E1710K	0.999	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915				63	0	0	54	14	20.5882
SLITRK1	0	genome.wustl.edu	37	13	84454576	84454576	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	84454576	84454576	T	G	SNP	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	missense	c.1067	p.K356T	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235				116	0	0	105	17	13.9344
SLITRK5	0	genome.wustl.edu	37	13	88328837	88328837	+	Silent	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	13	88328837	88328837	C	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	silent	c.1194	p.I398	0.982	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				70	0	0	57	12	17.3913
PACS2	0	genome.wustl.edu	37	14	105849775	105849775	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	105849775	105849775	C	T	SNP	PACS2	ENST00000458164	human	ensembl	74_37	+1	known	missense	c.1705	p.R569W	0.995	pfam_Phosphofurin_acidic_CS-1	pfam_Phosphofurin_acidic_CS-1	-	no_errors	PACS2	HGNC	ENSG00000179364				90	0	0	33	21	38.8889
LRRC16B	0	genome.wustl.edu	37	14	24535653	24535653	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	24535653	24535653	G	A	SNP	LRRC16B	ENST00000342740	human	ensembl	74_37	+1	known	missense	c.3572	p.R1191Q	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648				233	0	0	122	38	23.75
RTN1	0	genome.wustl.edu	37	14	60072171	60072171	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	60072171	60072171	G	A	SNP	RTN1	ENST00000267484	human	ensembl	74_37	-1	known	missense	c.2027	p.T676M	1.000	pfam_Reticulon,pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN1	HGNC	ENSG00000139970				67	0	0	61	8	11.5942
FLRT2	0	genome.wustl.edu	37	14	86088495	86088495	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	86088495	86088495	G	A	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	missense	c.637	p.G213R	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070				123	0	0	71	37	34.2593
PTPN21	0	genome.wustl.edu	37	14	88967137	88967137	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	14	88967137	88967137	C	T	SNP	PTPN21	ENST00000328736	human	ensembl	74_37	-1	known	missense	c.754	p.V252M	0.983	pfam_FERM_PH-like_C,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN21	HGNC	ENSG00000070778				104	0	0	66	10	13.1579
EXD1	0	genome.wustl.edu	37	15	41476611	41476611	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	41476611	41476611	A	T	SNP	EXD1	ENST00000314992	human	ensembl	74_37	-1	known	missense	c.1063	p.L355I	0.000	NULL	pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD1	HGNC	ENSG00000178997				168	0	0	129	14	9.79021
NARG2	0	genome.wustl.edu	37	15	60734733	60734733	+	Silent	SNP	A	A	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	60734733	60734733	A	C	SNP	NARG2	ENST00000261520	human	ensembl	74_37	-1	known	silent	c.2307	p.V769	0.255	pfam_NARG2_C	pfam_NARG2_C	-	no_errors	NARG2	HGNC	ENSG00000128915				87	0	0	47	4	7.84314
VPS13C	0	genome.wustl.edu	37	15	62302673	62302673	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	62302673	62302673	G	C	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.1009	p.Q337E	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				129	0	0	65	19	22.619
MAP2K1	0	genome.wustl.edu	37	15	66774194	66774194	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	66774194	66774194	G	A	SNP	MAP2K1	ENST00000307102	human	ensembl	74_37	+1	known	missense	c.670	p.V224M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP2K1	HGNC	ENSG00000169032				63	0	0	45	4	8.16327
NEO1	0	genome.wustl.edu	37	15	73562536	73562536	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	73562536	73562536	C	T	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	nonsense	c.2680	p.R894*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141				90	0	0	50	7	12.2807
ENSG00000187812	0	genome.wustl.edu	37	15	76073330	76073330	+	RNA	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	76073330	76073330	G	A	SNP	ENSG00000187812	ENST00000395215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-24M17.5	Clone_based_vega_gene	ENSG00000187812				106	0	0	59	7	10.6061
KIAA1024	0	genome.wustl.edu	37	15	79750690	79750690	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	15	79750690	79750690	G	A	SNP	KIAA1024	ENST00000305428	human	ensembl	74_37	+1	known	missense	c.2201	p.R734H	1.000	NULL	pfam_UPF0258	-	no_errors	KIAA1024	HGNC	ENSG00000169330				94	0	0	58	13	18.3099
GP2	0	genome.wustl.edu	37	16	20328576	20328576	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	20328576	20328576	C	T	SNP	GP2	ENST00000381362	human	ensembl	74_37	-1	known	missense	c.1384	p.E462K	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	GP2	HGNC	ENSG00000169347				67	0	0	42	17	28.8136
CDH8	0	genome.wustl.edu	37	16	61851406	61851406	+	Silent	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	61851406	61851406	A	G	SNP	CDH8	ENST00000577390	human	ensembl	74_37	-1	known	silent	c.1254	p.P418	0.970	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH8	HGNC	ENSG00000150394				72	0	0	48	8	14.2857
MON1B	0	genome.wustl.edu	37	16	77227645	77227645	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	77227645	77227645	C	T	SNP	MON1B	ENST00000248248	human	ensembl	74_37	+1	known	missense	c.446	p.A149V	1.000	pfam_Vacuolar_fusion_protein_MON1	pfam_Vacuolar_fusion_protein_MON1,prints_Vacuolar_fusion_protein_MON1	-	no_errors	MON1B	HGNC	ENSG00000103111				79	0	0	44	19	30.1587
KCNG4	0	genome.wustl.edu	37	16	84256130	84256130	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	84256130	84256130	G	A	SNP	KCNG4	ENST00000308251	human	ensembl	74_37	-1	known	missense	c.1253	p.T418M	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG4	HGNC	ENSG00000168418				72	0	0	63	4	5.97015
CA5A	0	genome.wustl.edu	37	16	87960481	87960481	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	16	87960481	87960481	C	A	SNP	CA5A	ENST00000309893	human	ensembl	74_37	-1	known	missense	c.213	p.W71C	0.317	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA5A	HGNC	ENSG00000174990				24	0	0	11	8	42.1053
HS3ST3B1	0	genome.wustl.edu	37	17	14248369	14248369	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	14248369	14248369	C	T	SNP	HS3ST3B1	ENST00000360954	human	ensembl	74_37	+1	known	silent	c.579	p.D193	0.071	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST3B1	HGNC	ENSG00000125430				66	0	0	34	9	20.9302
TP53	0	genome.wustl.edu	37	17	7577539	7577539	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	7577539	7577539	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.742	p.R248W	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				113	0	0	68	14	17.0732
OGFOD3	0	genome.wustl.edu	37	17	80352405	80352405	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	80352405	80352405	G	A	SNP	OGFOD3	ENST00000329197	human	ensembl	74_37	-1	known	missense	c.838	p.R280W	0.001	smart_Pro_4_hyd_alph	smart_Pro_4_hyd_alph	-	no_errors	OGFOD3	HGNC	ENSG00000181396				87	0	0	49	15	23.4375
PIK3R5	0	genome.wustl.edu	37	17	8793325	8793325	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	8793325	8793325	G	A	SNP	PIK3R5	ENST00000447110	human	ensembl	74_37	-1	known	missense	c.776	p.A259V	0.886	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R5	HGNC	ENSG00000141506				105	0	0	58	49	45.7944
CEP192	0	genome.wustl.edu	37	18	13068139	13068139	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	13068139	13068139	G	A	SNP	CEP192	ENST00000506447	human	ensembl	74_37	+1	known	missense	c.4661	p.R1554Q	0.000	NULL	NULL	-	no_errors	CEP192	HGNC	ENSG00000101639				113	1	0.877193	127	13	9.28571
METTL4	0	genome.wustl.edu	37	18	2566839	2566839	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	2566839	2566839	G	A	SNP	METTL4	ENST00000574538	human	ensembl	74_37	-1	known	missense	c.377	p.S126F	0.008	NULL	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL4	HGNC	ENSG00000101574				31	0	0	38	8	17.3913
FHOD3	0	genome.wustl.edu	37	18	34340742	34340742	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	34340742	34340742	C	T	SNP	FHOD3	ENST00000257209	human	ensembl	74_37	+1	known	nonsense	c.4072	p.R1358*	1.000	NULL	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775				54	0	0	1	7	87.5
DLGAP1	0	genome.wustl.edu	37	18	3534261	3534261	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	3534261	3534261	G	A	SNP	DLGAP1	ENST00000315677	human	ensembl	74_37	-1	known	nonsense	c.2410	p.R804*	0.999	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579				105	0	0	105	15	12.5
EPB41L3	0	genome.wustl.edu	37	18	5416299	5416299	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	5416299	5416299	G	A	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	missense	c.1585	p.R529C	1.000	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397				111	0	0	104	21	16.8
ATP9B	0	genome.wustl.edu	37	18	77107820	77107820	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	18	77107820	77107820	G	A	SNP	ATP9B	ENST00000426216	human	ensembl	74_37	+1	known	silent	c.2733	p.R911	0.927	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9B	HGNC	ENSG00000166377				112	0	0	51	3	5.55556
HMHA1	0	genome.wustl.edu	37	19	1073509	1073509	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	1073509	1073509	C	T	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	silent	c.570	p.F190	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448				45	0	0	34	11	24.4444
SMARCA4	0	genome.wustl.edu	37	19	11144113	11144113	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	11144113	11144113	G	A	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3694	p.G1232S	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				179	0	0	98	41	29.4964
DIRAS1	0	genome.wustl.edu	37	19	2717373	2717373	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	2717373	2717373	G	A	SNP	DIRAS1	ENST00000323469	human	ensembl	74_37	-1	known	silent	c.432	p.C144	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS1	HGNC	ENSG00000176490				154	0	0	74	31	29.5238
PSG9	0	genome.wustl.edu	37	19	43763168	43763168	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	43763168	43763168	C	T	SNP	PSG9	ENST00000270077	human	ensembl	74_37	-1	known	missense	c.829	p.G277S	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG9	HGNC	ENSG00000183668				416	0	0	254	109	30.0275
ZNF180	0	genome.wustl.edu	37	19	44980912	44980912	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	44980912	44980912	G	A	SNP	ZNF180	ENST00000221327	human	ensembl	74_37	-1	known	nonsense	c.1786	p.Q596*	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF180	HGNC	ENSG00000167384				100	0	0	97	27	21.7742
ZNF180	0	genome.wustl.edu	37	19	44980957	44980957	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	44980957	44980957	G	A	SNP	ZNF180	ENST00000221327	human	ensembl	74_37	-1	known	nonsense	c.1741	p.Q581*	0.170	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF180	HGNC	ENSG00000167384				103	0	0	97	23	19.1667
CBLC	0	genome.wustl.edu	37	19	45293274	45293274	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	45293274	45293274	G	A	SNP	CBLC	ENST00000270279	human	ensembl	74_37	+1	known	missense	c.931	p.D311N	0.999	pfam_Adaptor_Cbl_SH2-like	pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Adaptor_Cbl_N_hlx,pfam_Znf_C3HC4_RING-type,superfamily_Adaptor_Cbl_N_hlx,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	CBLC	HGNC	ENSG00000142273				236	0	0	139	70	33.4928
FOSB	0	genome.wustl.edu	37	19	45974160	45974160	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	45974160	45974160	C	T	SNP	FOSB	ENST00000353609	human	ensembl	74_37	+1	known	missense	c.400	p.P134S	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	FOSB	HGNC	ENSG00000125740				109	0	0	50	6	10.7143
TRPM4	0	genome.wustl.edu	37	19	49686058	49686058	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	49686058	49686058	C	T	SNP	TRPM4	ENST00000252826	human	ensembl	74_37	+1	known	missense	c.1487	p.A496V	0.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM4	HGNC	ENSG00000130529				43	0	0	19	7	26.9231
MYADM	0	genome.wustl.edu	37	19	54377192	54377192	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	54377192	54377192	G	A	SNP	MYADM	ENST00000336967	human	ensembl	74_37	+1	known	missense	c.409	p.A137T	1.000	pfam_Marvel	pfam_Marvel	-	no_errors	MYADM	HGNC	ENSG00000179820				181	0	0	70	35	33.3333
MISP	0	genome.wustl.edu	37	19	757997	757997	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	757997	757997	G	A	SNP	MISP	ENST00000215582	human	ensembl	74_37	+1	known	missense	c.1051	p.V351M	0.975	NULL	NULL	-	no_errors	MISP	HGNC	ENSG00000099812				40	0	0	7	6	46.1538
ZNF558	0	genome.wustl.edu	37	19	8922235	8922235	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	8922235	8922235	C	T	SNP	ZNF558	ENST00000301475	human	ensembl	74_37	-1	known	missense	c.931	p.V311I	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF558	HGNC	ENSG00000167785				110	0	0	55	23	29.4872
ZNF559	0	genome.wustl.edu	37	19	9452409	9452409	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	19	9452409	9452409	C	G	SNP	ZNF559	ENST00000393883	human	ensembl	74_37	+1	known	missense	c.282	p.N94K	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF559	HGNC	ENSG00000188321				88	0	0	49	20	28.9855
CNTNAP5	0	genome.wustl.edu	37	2	125261960	125261960	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	125261960	125261960	C	G	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.1151	p.P384R	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052				109	0	0	67	28	29.4737
THSD7B	0	genome.wustl.edu	37	2	138169429	138169429	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	138169429	138169429	C	A	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	missense	c.2946	p.F982L	0.991	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229				34	0	0	24	6	20
NEB	0	genome.wustl.edu	37	2	152554109	152554109	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	152554109	152554109	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.1206	p.C402	0.873	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				71	0	0	43	13	23.2143
TTN	0	genome.wustl.edu	37	2	179401240	179401240	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	179401240	179401240	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.92530	p.A30844T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				104	0	0	50	16	24.2424
TTN	0	genome.wustl.edu	37	2	179485078	179485078	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	179485078	179485078	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.38466	p.P12822	0.761	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				129	0	0	97	25	20.4918
TTN	0	genome.wustl.edu	37	2	179656861	179656861	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	179656861	179656861	C	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.1600	p.E534Q	1.000	pfam_Titin_Z,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				46	0	0	27	4	12.9032
PGAP1	0	genome.wustl.edu	37	2	197712755	197712755	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	197712755	197712755	C	A	SNP	PGAP1	ENST00000354764	human	ensembl	74_37	-1	known	missense	c.1868	p.C623F	1.000	NULL	pfam_PGAP1-like	-	no_errors	PGAP1	HGNC	ENSG00000197121				63	0	0	38	11	22.449
BOLL	0	genome.wustl.edu	37	2	198641828	198641828	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	198641828	198641828	G	A	SNP	BOLL	ENST00000321801	human	ensembl	74_37	-1	known	silent	c.267	p.F89	0.171	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	BOLL	HGNC	ENSG00000152430				50	0	0	38	4	9.52381
TRAK2	0	genome.wustl.edu	37	2	202259577	202259577	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	202259577	202259577	C	T	SNP	TRAK2	ENST00000332624	human	ensembl	74_37	-1	known	missense	c.919	p.E307K	1.000	pfam_HAP1_N	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK2	HGNC	ENSG00000115993				43	0	0	20	5	20
TRAK2	0	genome.wustl.edu	37	2	202260143	202260143	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	202260143	202260143	C	G	SNP	TRAK2	ENST00000332624	human	ensembl	74_37	-1	known	missense	c.794	p.R265T	0.834	pfam_HAP1_N	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK2	HGNC	ENSG00000115993				168	0	0	98	20	16.9492
PAX3	0	genome.wustl.edu	37	2	223065899	223065899	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	223065899	223065899	C	A	SNP	PAX3	ENST00000392069	human	ensembl	74_37	-1	known	missense	c.1512	p.E504D	0.091	NULL	pfam_Paired_dom,pfam_Pax7,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX3	HGNC	ENSG00000135903				52	0	0	30	5	14.2857
CAB39	0	genome.wustl.edu	37	2	231624768	231624768	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	231624768	231624768	A	T	SNP	CAB39	ENST00000258418	human	ensembl	74_37	+1	known	missense	c.52	p.N18Y	1.000	pfam_Mo25,superfamily_ARM-type_fold	pfam_Mo25,superfamily_ARM-type_fold	-	no_errors	CAB39	HGNC	ENSG00000135932				127	0	0	83	6	6.74157
CAB39	0	genome.wustl.edu	37	2	231624774	231624774	+	Nonsense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	231624774	231624774	A	T	SNP	CAB39	ENST00000258418	human	ensembl	74_37	+1	known	nonsense	c.58	p.K20*	1.000	pfam_Mo25,superfamily_ARM-type_fold	pfam_Mo25,superfamily_ARM-type_fold	-	no_errors	CAB39	HGNC	ENSG00000135932				121	0	0	82	5	5.74713
GPR55	0	genome.wustl.edu	37	2	231775046	231775046	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	231775046	231775046	C	T	SNP	GPR55	ENST00000392039	human	ensembl	74_37	-1	known	missense	c.632	p.R211H	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR55	HGNC	ENSG00000135898				115	0	0	67	7	9.45946
ECEL1	0	genome.wustl.edu	37	2	233348908	233348908	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	233348908	233348908	G	A	SNP	ECEL1	ENST00000304546	human	ensembl	74_37	-1	known	missense	c.1210	p.R404C	1.000	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	ECEL1	HGNC	ENSG00000171551				50	0	0	31	6	16.2162
ASB18	0	genome.wustl.edu	37	2	237123062	237123062	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	237123062	237123062	C	T	SNP	ASB18	ENST00000409749	human	ensembl	74_37	-1	known	silent	c.1044	p.T348	0.894	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB18	HGNC	ENSG00000182177				12	0	0	0	2	100
ITSN2	0	genome.wustl.edu	37	2	24443845	24443845	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	24443845	24443845	C	T	SNP	ITSN2	ENST00000355123	human	ensembl	74_37	-1	known	missense	c.3668	p.R1223Q	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN2	HGNC	ENSG00000198399				206	1	0.483092	146	10	6.41026
IFT172	0	genome.wustl.edu	37	2	27677454	27677454	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	27677454	27677454	C	A	SNP	IFT172	ENST00000260570	human	ensembl	74_37	-1	known	missense	c.3445	p.A1149S	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat	-	no_errors	IFT172	HGNC	ENSG00000138002				83	0	0	56	13	18.8406
SOS1	0	genome.wustl.edu	37	2	39278343	39278343	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	39278343	39278343	A	T	SNP	SOS1	ENST00000402219	human	ensembl	74_37	-1	known	missense	c.806	p.M269K	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS1	HGNC	ENSG00000115904				90	0	0	68	16	19.0476
DYSF	0	genome.wustl.edu	37	2	71894611	71894611	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	71894611	71894611	C	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	missense	c.5399	p.P1800H	0.998	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				90	0	0	72	6	7.69231
CTNNA2	0	genome.wustl.edu	37	2	80831299	80831299	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	80831299	80831299	G	T	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.2392	p.D798Y	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Vinculin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				68	0	0	29	6	17.1429
SMYD1	0	genome.wustl.edu	37	2	88408026	88408026	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	2	88408026	88408026	G	A	SNP	SMYD1	ENST00000419482	human	ensembl	74_37	+1	known	missense	c.1282	p.G428R	1.000	NULL	pfam_SET_dom,pfam_Znf_MYND,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_MYND	-	no_errors	SMYD1	HGNC	ENSG00000115593				55	0	0	27	3	10
CST8	0	genome.wustl.edu	37	20	23473666	23473666	+	Silent	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	23473666	23473666	T	G	SNP	CST8	ENST00000246012	human	ensembl	74_37	+1	known	silent	c.303	p.T101	0.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST8	HGNC	ENSG00000125815				190	0	0	112	10	8.19672
FRG1B	0	genome.wustl.edu	37	20	29625956	29625956	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	29625956	29625956	G	A	SNP	FRG1B	ENST00000278882	human	ensembl	74_37	+1	known	missense	c.200	p.R67K	1.000	pfam_FRG1,superfamily_Actin_cross-linking	pfam_FRG1,superfamily_Actin_cross-linking	-	no_errors	FRG1B	HGNC	ENSG00000149531				139	1	0.714286	124	8	6.06061
ZSWIM3	0	genome.wustl.edu	37	20	44506132	44506132	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	44506132	44506132	G	A	SNP	ZSWIM3	ENST00000255152	human	ensembl	74_37	+1	known	missense	c.935	p.R312Q	0.996	pfam_MULE_transposase_dom,pfam_Transposase	pfam_Znf_SWIM,pfam_MULE_transposase_dom,pfam_Transposase,smart_Znf_PMZ,pfscan_Znf_SWIM	-	no_errors	ZSWIM3	HGNC	ENSG00000132801				122	0	0	91	6	6.18557
FAM65C	0	genome.wustl.edu	37	20	49211914	49211914	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	49211914	49211914	A	G	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	missense	c.2042	p.I681T	0.046	NULL	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062				214	0	0	148	13	8.07453
LAMA5	0	genome.wustl.edu	37	20	60909037	60909037	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	20	60909037	60909037	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.2798	p.R933Q	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				41	0	0	27	5	15.625
KRTAP21-1	0	genome.wustl.edu	37	21	32127676	32127676	+	Silent	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	21	32127676	32127676	G	T	SNP	KRTAP21-1	ENST00000335093	human	ensembl	74_37	-1	known	silent	c.21	p.G7	0.559	NULL	NULL	-	no_errors	KRTAP21-1	HGNC	ENSG00000187005				233	0	0	132	56	29.7872
SCAF4	0	genome.wustl.edu	37	21	33076196	33076196	+	Nonsense_Mutation	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	21	33076196	33076196	G	C	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	nonsense	c.203	p.S68*	1.000	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_CID_dom	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304				93	0	0	37	18	32.7273
KRTAP10-1	0	genome.wustl.edu	37	21	45959607	45959607	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	21	45959607	45959607	C	T	SNP	KRTAP10-1	ENST00000400375	human	ensembl	74_37	-1	known	missense	c.427	p.V143M	0.197	NULL	NULL	-	no_errors	KRTAP10-1	HGNC	ENSG00000215455				215	0	0	136	14	9.33333
CECR1	0	genome.wustl.edu	37	22	17662742	17662742	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	22	17662742	17662742	C	T	SNP	CECR1	ENST00000262607	human	ensembl	74_37	-1	known	silent	c.1410	p.R470	1.000	pfam_A/AMP_deaminase_dom,tigrfam_Ad_deam-like	pfam_A/AMP_deaminase_dom,pfam_A_deaminase_N,tigrfam_Ad_deam-like	-	no_errors	CECR1	HGNC	ENSG00000093072				69	0	0	19	25	56.8182
CECR1	0	genome.wustl.edu	37	22	17690543	17690543	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	22	17690543	17690543	G	A	SNP	CECR1	ENST00000262607	human	ensembl	74_37	-1	known	missense	c.25	p.R9W	0.000	NULL	pfam_A/AMP_deaminase_dom,pfam_A_deaminase_N,tigrfam_Ad_deam-like	-	no_errors	CECR1	HGNC	ENSG00000093072				56	0	0	32	6	15.7895
PRODH	0	genome.wustl.edu	37	22	18907072	18907072	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	22	18907072	18907072	G	A	SNP	PRODH	ENST00000357068	human	ensembl	74_37	-1	known	silent	c.1143	p.A381	0.501	pfam_Proline_DH	pfam_Proline_DH	-	no_errors	PRODH	HGNC	ENSG00000100033				36	0	0	22	8	26.6667
EPHB1	0	genome.wustl.edu	37	3	134967263	134967263	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	134967263	134967263	C	T	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.2602	p.R868W	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928				92	0	0	45	13	22.4138
ATR	0	genome.wustl.edu	37	3	142275400	142275400	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	142275400	142275400	G	A	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	nonsense	c.1903	p.R635*	0.500	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054				119	0	0	56	22	28.2051
MRPL47	0	genome.wustl.edu	37	3	179306671	179306671	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	179306671	179306671	T	G	SNP	MRPL47	ENST00000476781	human	ensembl	74_37	-1	known	missense	c.742	p.S248R	0.991	NULL	pfam_Ribosomal_L47_mit	-	no_errors	MRPL47	HGNC	ENSG00000136522				131	1	0.757576	91	12	11.6505
EIF4G1	0	genome.wustl.edu	37	3	184039582	184039582	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	184039582	184039582	C	T	SNP	EIF4G1	ENST00000352767	human	ensembl	74_37	+1	known	missense	c.1231	p.L411F	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G1	HGNC	ENSG00000114867				378	0	0	250	56	18.3007
KCNH8	0	genome.wustl.edu	37	3	19479730	19479730	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	19479730	19479730	C	T	SNP	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	nonsense	c.1252	p.R418*	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960				186	0	0	64	72	52.9412
SCN5A	0	genome.wustl.edu	37	3	38597190	38597190	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	38597190	38597190	T	G	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.4499	p.K1500T	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873				97	0	0	28	30	51.7241
EPHA6	0	genome.wustl.edu	37	3	97466293	97466293	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	97466293	97466293	C	T	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	missense	c.3155	p.P1052L	0.848	superfamily_SAM/pointed,smart_SAM	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224				15	0	0	6	8	57.1429
PRRT3	0	genome.wustl.edu	37	3	9990795	9990795	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	3	9990795	9990795	C	T	SNP	PRRT3	ENST00000295984	human	ensembl	74_37	-1	known	silent	c.1005	p.P335	0.001	NULL	NULL	-	no_errors	PRRT3	HGNC	ENSG00000163704				161	0	0	61	55	47.4138
TACR3	0	genome.wustl.edu	37	4	104577407	104577407	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	104577407	104577407	C	A	SNP	TACR3	ENST00000304883	human	ensembl	74_37	-1	known	nonsense	c.832	p.E278*	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NK3_rcpt,prints_Neurokn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NK3_rcpt,prints_Neurokn_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NK1_rcpt	-	no_errors	TACR3	HGNC	ENSG00000169836				109	0	0	38	35	47.9452
ENPEP	0	genome.wustl.edu	37	4	111397617	111397617	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	111397617	111397617	C	T	SNP	ENPEP	ENST00000265162	human	ensembl	74_37	+1	known	missense	c.47	p.T16M	0.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792				189	0	0	114	14	10.9375
ALPK1	0	genome.wustl.edu	37	4	113353715	113353715	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	113353715	113353715	C	T	SNP	ALPK1	ENST00000177648	human	ensembl	74_37	+1	known	silent	c.3012	p.P1004	0.113	superfamily_Kinase-like_dom	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	ALPK1	HGNC	ENSG00000073331				139	0	0	75	17	18.4783
BOD1L1	0	genome.wustl.edu	37	4	13600735	13600735	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	13600735	13600735	G	A	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	missense	c.7789	p.P2597S	0.020	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219				84	0	0	27	25	48.0769
TRIML2	0	genome.wustl.edu	37	4	189020199	189020199	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	189020199	189020199	G	A	SNP	TRIML2	ENST00000512729	human	ensembl	74_37	-1	known	missense	c.461	p.A154V	0.000	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	TRIML2	HGNC	ENSG00000179046				81	0	0	53	7	11.6667
GABRB1	0	genome.wustl.edu	37	4	47405441	47405441	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	47405441	47405441	G	C	SNP	GABRB1	ENST00000295454	human	ensembl	74_37	+1	known	missense	c.651	p.K217N	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB1	HGNC	ENSG00000163288				66	0	0	47	7	12.963
NPFFR2	0	genome.wustl.edu	37	4	72897735	72897735	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	72897735	72897735	C	T	SNP	NPFFR2	ENST00000308744	human	ensembl	74_37	+1	known	silent	c.117	p.R39	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPFF_rcpt_2,prints_NPFF_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPFFR2	HGNC	ENSG00000056291				91	0	0	28	7	20
UNC5C	0	genome.wustl.edu	37	4	96091390	96091390	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	4	96091390	96091390	G	A	SNP	UNC5C	ENST00000453304	human	ensembl	74_37	-1	known	missense	c.2545	p.R849W	1.000	superfamily_DEATH-like_dom,smart_Death_domain	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5C	HGNC	ENSG00000182168				348	0	0	185	29	13.5514
AFF4	0	genome.wustl.edu	37	5	132232559	132232559	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	132232559	132232559	G	T	SNP	AFF4	ENST00000265343	human	ensembl	74_37	-1	known	missense	c.1763	p.T588N	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF4	HGNC	ENSG00000072364				79	0	0	49	6	10.9091
PCDHB6	0	genome.wustl.edu	37	5	140531355	140531355	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	140531355	140531355	C	T	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.1517	p.A506V	0.291	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				235	0	0	57	72	55.814
PCDHGB1	0	genome.wustl.edu	37	5	140731511	140731511	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	140731511	140731511	G	A	SNP	PCDHGB1	ENST00000523390	human	ensembl	74_37	+1	known	missense	c.1684	p.A562T	0.080	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB1	HGNC	ENSG00000254221				109	0	0	15	8	34.7826
PCDHGB3	0	genome.wustl.edu	37	5	140749978	140749978	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	140749978	140749978	G	T	SNP	PCDHGB3	ENST00000576222	human	ensembl	74_37	+1	known	missense	c.17	p.G6V	0.001	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209				53	0	0	23	20	46.5116
TENM2	0	genome.wustl.edu	37	5	167627103	167627103	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	167627103	167627103	G	A	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.3397	p.G1133S	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934				32	0	0	9	11	55
ZFP2	0	genome.wustl.edu	37	5	178359223	178359223	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	178359223	178359223	C	T	SNP	ZFP2	ENST00000361362	human	ensembl	74_37	+1	known	silent	c.909	p.C303	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP2	HGNC	ENSG00000198939				78	0	0	49	4	7.54717
EDIL3	0	genome.wustl.edu	37	5	83680162	83680162	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	83680162	83680162	C	A	SNP	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	missense	c.31	p.V11F	0.021	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176				150	0	0	33	25	43.1034
MYCT1	0	genome.wustl.edu	37	6	153042975	153042975	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	153042975	153042975	G	T	SNP	MYCT1	ENST00000367245	human	ensembl	74_37	+1	known	missense	c.295	p.A99S	1.000	NULL	NULL	-	no_errors	MYCT1	HGNC	ENSG00000120279				100	0	0	76	5	6.17284
HIST1H2BO	0	genome.wustl.edu	37	6	27861305	27861305	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	27861305	27861305	C	G	SNP	HIST1H2BO	ENST00000303806	human	ensembl	74_37	+1	known	missense	c.65	p.A22G	1.000	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BO	HGNC	ENSG00000196331				105	0	0	87	9	9.375
ZNF165	0	genome.wustl.edu	37	6	28056607	28056607	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	28056607	28056607	G	A	SNP	ZNF165	ENST00000377325	human	ensembl	74_37	+1	known	missense	c.817	p.D273N	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF165	HGNC	ENSG00000197279				56	0	0	22	13	37.1429
TNXB	0	genome.wustl.edu	37	6	32011597	32011597	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	32011597	32011597	C	G	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.11453	p.R3818P	0.024	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				245	0	0	144	10	6.49351
BTNL2	0	genome.wustl.edu	37	6	32372905	32372905	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	32372905	32372905	C	T	SNP	BTNL2	ENST00000454136	human	ensembl	74_37	-1	known	missense	c.238	p.G80R	0.749	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	BTNL2	HGNC	ENSG00000204290				193	0	0	141	21	12.963
MCM3	0	genome.wustl.edu	37	6	52142412	52142412	+	Silent	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	52142412	52142412	G	C	SNP	MCM3	ENST00000596288	human	ensembl	74_37	-1	known	silent	c.1089	p.L363	0.984	pfam_MCM_DNA-dep_ATPase,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase,prints_Mcm3	-	no_errors	MCM3	HGNC	ENSG00000112118				126	0	0	74	19	20.4301
ICK	0	genome.wustl.edu	37	6	52884073	52884073	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	52884073	52884073	C	T	SNP	ICK	ENST00000350082	human	ensembl	74_37	-1	known	missense	c.443	p.R148Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ICK	HGNC	ENSG00000112144				52	0	0	41	6	12.766
C7orf60	0	genome.wustl.edu	37	7	112461939	112461939	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	112461939	112461939	G	A	SNP	C7orf60	ENST00000297145	human	ensembl	74_37	-1	known	nonsense	c.1078	p.R360*	1.000	NULL	pfam_DUF3321	-	no_errors	C7orf60	HGNC	ENSG00000164603				46	0	0	21	3	12.5
OR9A4	0	genome.wustl.edu	37	7	141619580	141619580	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	141619580	141619580	G	A	SNP	OR9A4	ENST00000548136	human	ensembl	74_37	+1	known	missense	c.905	p.R302Q	0.002	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9A4	HGNC	ENSG00000258083				94	0	0	65	22	25.2874
TRPV5	0	genome.wustl.edu	37	7	142622604	142622604	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	142622604	142622604	C	A	SNP	TRPV5	ENST00000442623	human	ensembl	74_37	-1	novel	missense	c.1142	p.G381V	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,prints_Ankyrin_rpt	-	no_errors	TRPV5	HGNC	ENSG00000127412				45	0	0	19	6	24
SSPO	0	genome.wustl.edu	37	7	149523267	149523267	+	RNA	SNP	A	A	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	149523267	149523267	A	G	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.321	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				95	0	0	33	21	38.8889
AGMO	0	genome.wustl.edu	37	7	15584446	15584446	+	Silent	SNP	G	G	C			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	15584446	15584446	G	C	SNP	AGMO	ENST00000342526	human	ensembl	74_37	-1	known	silent	c.360	p.A120	0.963	pfam_Fatty_acid_hydroxylase	pfam_Fatty_acid_hydroxylase	-	no_errors	AGMO	HGNC	ENSG00000187546				161	0	0	157	18	10.2857
SDK1	0	genome.wustl.edu	37	7	4107518	4107518	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	4107518	4107518	C	A	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.2960	p.S987Y	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				23	0	0	31	6	16.2162
C1GALT1	0	genome.wustl.edu	37	7	7283232	7283232	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	7283232	7283232	C	T	SNP	C1GALT1	ENST00000223122	human	ensembl	74_37	+1	known	silent	c.966	p.L322	1.000	NULL	pfam_Fringe-like,pfam_Glyco_trans_31	-	no_errors	C1GALT1	HGNC	ENSG00000106392				151	1	0.657895	124	20	13.8889
KIAA1324L	0	genome.wustl.edu	37	7	86509822	86509822	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	86509822	86509822	C	A	SNP	KIAA1324L	ENST00000450689	human	ensembl	74_37	-1	known	missense	c.3055	p.V1019F	1.000	NULL	superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Growth_fac_rcpt_N_dom	-	no_errors	KIAA1324L	HGNC	ENSG00000164659				43	0	0	41	4	8.88889
DLX5	0	genome.wustl.edu	37	7	96651624	96651624	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	96651624	96651624	C	T	SNP	DLX5	ENST00000222598	human	ensembl	74_37	-1	known	missense	c.413	p.R138H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Distal-less_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX5	HGNC	ENSG00000105880				163	0	0	109	13	10.6557
CSMD3	0	genome.wustl.edu	37	8	113933896	113933896	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	113933896	113933896	T	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.1593	p.E531D	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				98	0	0	63	39	38.2353
CPSF1	0	genome.wustl.edu	37	8	145622114	145622114	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	145622114	145622114	C	A	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	nonsense	c.2623	p.E875*	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				47	0	0	25	9	26.4706
UNC5D	0	genome.wustl.edu	37	8	35608158	35608158	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	35608158	35608158	C	T	SNP	UNC5D	ENST00000404895	human	ensembl	74_37	+1	known	missense	c.1994	p.A665V	0.999	NULL	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death_domain,pfam_Immunoglobulin,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5D	HGNC	ENSG00000156687				164	1	0.606061	78	22	22
ST18	0	genome.wustl.edu	37	8	53073985	53073985	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	53073985	53073985	C	T	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	missense	c.1544	p.R515H	0.999	pfam_Myelin_TF	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488				150	0	0	102	10	8.92857
PDE7A	0	genome.wustl.edu	37	8	66647072	66647072	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	66647072	66647072	G	A	SNP	PDE7A	ENST00000401827	human	ensembl	74_37	-1	known	missense	c.653	p.A218V	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE7A	HGNC	ENSG00000205268				158	0	0	93	41	30.597
SLCO5A1	0	genome.wustl.edu	37	8	70744273	70744273	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	70744273	70744273	G	A	SNP	SLCO5A1	ENST00000260126	human	ensembl	74_37	-1	known	silent	c.636	p.F212	0.963	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571				39	0	0	14	7	33.3333
TRPA1	0	genome.wustl.edu	37	8	72984022	72984022	+	Silent	SNP	G	G	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	72984022	72984022	G	T	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	silent	c.192	p.T64	0.002	NULL	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321				38	0	0	25	11	30.5556
FABP9	0	genome.wustl.edu	37	8	82371457	82371457	+	Silent	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	8	82371457	82371457	G	A	SNP	FABP9	ENST00000379071	human	ensembl	74_37	-1	known	silent	c.189	p.I63	1.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	FABP9	HGNC	ENSG00000205186				160	0	0	155	16	9.35673
TNFSF15	0	genome.wustl.edu	37	9	117553091	117553091	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	117553091	117553091	T	G	SNP	TNFSF15	ENST00000374045	human	ensembl	74_37	-1	known	missense	c.397	p.N133H	1.000	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom,prints_TNF	-	no_errors	TNFSF15	HGNC	ENSG00000181634				90	0	0	63	5	7.35294
TRIM32	0	genome.wustl.edu	37	9	119461125	119461125	+	Silent	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	119461125	119461125	A	T	SNP	TRIM32	ENST00000373983	human	ensembl	74_37	+1	known	silent	c.1104	p.P368	0.937	pfscan_NHL_repeat_subgr	pfam_NHL_repeat,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM32	HGNC	ENSG00000119401				133	0	0	63	8	11.2676
ZBTB6	0	genome.wustl.edu	37	9	125673768	125673768	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	125673768	125673768	G	A	SNP	ZBTB6	ENST00000373659	human	ensembl	74_37	-1	known	missense	c.584	p.S195L	1.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB6	HGNC	ENSG00000186130				64	0	0	36	7	16.2791
TYRP1	0	genome.wustl.edu	37	9	12694213	12694213	+	Silent	SNP	C	C	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	12694213	12694213	C	A	SNP	TYRP1	ENST00000388918	human	ensembl	74_37	+1	known	silent	c.217	p.R73	0.997	NULL	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYRP1	HGNC	ENSG00000107165				38	0	0	22	3	12
PNPLA7	0	genome.wustl.edu	37	9	140361819	140361819	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	140361819	140361819	C	T	SNP	PNPLA7	ENST00000406427	human	ensembl	74_37	-1	known	missense	c.2989	p.E997K	0.999	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653				85	0	0	44	8	15.3846
NFIB	0	genome.wustl.edu	37	9	14120531	14120531	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	14120531	14120531	G	A	SNP	NFIB	ENST00000397581	human	ensembl	74_37	-1	known	missense	c.1153	p.P385S	1.000	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIB	HGNC	ENSG00000147862				103	1	0.961538	38	16	29.6296
FOCAD	0	genome.wustl.edu	37	9	20866978	20866978	+	Silent	SNP	A	A	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	20866978	20866978	A	T	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	silent	c.2157	p.A719	0.031	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352				131	0	0	74	5	6.32911
LINGO2	0	genome.wustl.edu	37	9	27950157	27950157	+	Silent	SNP	C	C	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	27950157	27950157	C	T	SNP	LINGO2	ENST00000308675	human	ensembl	74_37	-1	known	silent	c.513	p.R171	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO2	HGNC	ENSG00000174482				67	0	0	53	4	7.01754
AQP3	0	genome.wustl.edu	37	9	33442855	33442855	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	9	33442855	33442855	C	G	SNP	AQP3	ENST00000297991	human	ensembl	74_37	-1	known	missense	c.487	p.D163H	1.000	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_Aquaporin_3,prints_MIP,tigrfam_MIP	-	no_errors	AQP3	HGNC	ENSG00000165272				285	0	0	188	16	7.84314
DUSP9	0	genome.wustl.edu	37	X	152914821	152914821	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	X	152914821	152914821	G	A	SNP	DUSP9	ENST00000342782	human	ensembl	74_37	+1	known	missense	c.508	p.D170N	0.999	pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP9	HGNC	ENSG00000130829				42	0	0	13	6	31.5789
INSRR	0	genome.wustl.edu	37	1	156821834	156821840	+	Frame_Shift_Del	DEL	GGCAGGC	GGCAGGC	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	GGCAGGC	GGCAGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	1	156821834	156821840	GGCAGGC	-	DEL	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	frame_shift_del	c.787_781	p.A261fs	1.000:1.000:1.000:1.000:1.000:1.000:0.021	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Furin-like_Cys-rich_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSRR	HGNC	ENSG00000027644				76	0	0	28	7	20
MLLT6	0	genome.wustl.edu	37	17	36861913	36861914	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	17	36861913	36861914	-	T	INS	MLLT6	ENST00000325718	human	ensembl	74_37	+1	known	frame_shift_ins	c.28_29	p.C11fs	1.000:1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT6	HGNC	ENSG00000108292				174	0	0	96	24	20
APC	0	genome.wustl.edu	37	5	112175951	112175952	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	112175951	112175952	-	A	INS	APC	ENST00000257430	human	ensembl	74_37	+1	known	frame_shift_ins	c.4660_4661	p.T1556fs	0.925:0.945	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				81	0	0	48	32	40
PCDHGA2	0	genome.wustl.edu	37	5	140718743	140718743	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	5	140718743	140718743	A	-	DEL	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	frame_shift_del	c.205	p.R69fs	0.986	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853				122	0	0	102	9	8.10811
CD2AP	0	genome.wustl.edu	37	6	47576890	47576904	+	In_Frame_Del	DEL	CTTCTAAAGCAAATA	CTTCTAAAGCAAATA	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	CTTCTAAAGCAAATA	CTTCTAAAGCAAATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	47576890	47576904	CTTCTAAAGCAAATA	-	DEL	CD2AP	ENST00000359314	human	ensembl	74_37	+1	known	in_frame_del	c.1664_1678	p.SKANT556in_frame_del	0.999:0.998:1.000:1.000:1.000:1.000:0.998:0.990:0.937:0.986:0.989:0.987:0.801:0.744:0.004	NULL	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	CD2AP	HGNC	ENSG00000198087				75	0	0	44	17	27.8689
COL12A1	0	genome.wustl.edu	37	6	75890837	75890838	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	6	75890837	75890838	-	A	INS	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	frame_shift_ins	c.1982_1981	p.S661fs	1.000:0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				53	0	0	39	15	27.7778
SAMD9	0	genome.wustl.edu	37	7	92731760	92731760	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IN-A6RP-01A-21D-A33T-08	TCGA-IN-A6RP-10A-01D-A33W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d663ff29-3a7a-4b98-af78-45153a50b526	e84bf255-73be-4700-a439-058690f04ba7	7	92731760	92731760	A	-	DEL	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	frame_shift_del	c.3651	p.F1217fs	0.850	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413				99	0	0	84	12	12.5
