Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
A1BG	0	genome.wustl.edu	37	19	58862850	58862850	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	58862850	58862850	C	T	SNP	A1BG	ENST00000263100	human	ensembl	74_37	-1	known	missense	c.817	p.D273N	0.003	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	A1BG	HGNC	ENSG00000121410	tier1	-	-	106	0	0.00	125	89	41.59
ABCA7	0	genome.wustl.edu	37	19	1047344	1047344	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	1047344	1047344	G	A	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	silent	c.2034	p.R678	0.994	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687	tier1	-	-	34	0	0.00	20	14	41.18
ACKR2	0	genome.wustl.edu	37	3	42906640	42906640	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	42906640	42906640	C	A	SNP	ACKR2	ENST00000273145	human	ensembl	74_37	+1	known	missense	c.646	p.L216I	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_ATII_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_ATII_rcpt,prints_Chemokine_CXCR4	-	no_errors	ACKR2	HGNC	ENSG00000144648	tier1	-	-	240	0	0.00	147	81	35.53
ADIPOR2	0	genome.wustl.edu	37	12	1890115	1890115	+	Silent	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	1890115	1890115	T	C	SNP	ADIPOR2	ENST00000357103	human	ensembl	74_37	+1	known	silent	c.711	p.Y237	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	ADIPOR2	HGNC	ENSG00000006831	tier1	-	-	188	0	0.00	106	66	38.37
ADNP	0	genome.wustl.edu	37	20	49508238	49508238	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	49508238	49508238	C	A	SNP	ADNP	ENST00000349014	human	ensembl	74_37	-1	known	missense	c.3013	p.D1005Y	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ADNP	HGNC	ENSG00000101126	tier1	-	-	144	0	0.00	106	64	37.65
AGTPBP1	0	genome.wustl.edu	37	9	88247592	88247592	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	88247592	88247592	G	A	SNP	AGTPBP1	ENST00000376109	human	ensembl	74_37	-1	known	missense	c.2036	p.P679L	1.000	NULL	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGTPBP1	HGNC	ENSG00000135049	tier1	-	-	75	0	0.00	81	7	7.95
AHNAK2	0	genome.wustl.edu	37	14	105413513	105413513	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	105413513	105413513	C	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.8275	p.D2759Y	0.209	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	389	0	0.00	188	98	34.15
AHRR	0	genome.wustl.edu	37	5	353860	353860	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	353860	353860	G	A	SNP	AHRR	ENST00000316418	human	ensembl	74_37	+1	known	silent	c.90	p.G30	0.016	pfscan_bHLH_dom	pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	AHRR	HGNC	ENSG00000063438	tier1	-	-	80	0	0.00	68	5	6.76
ANP32A	0	genome.wustl.edu	37	15	69072347	69072347	+	RNA	DEL	G	G	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	69072347	69072347	G	-	DEL	ANP32A	ENST00000267918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANP32A	HGNC	ENSG00000140350	tier1			23	0	0.00	9	3	25.00
AOX1	0	genome.wustl.edu	37	2	201468739	201468739	+	Splice_Site	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	201468739	201468739	G	A	SNP	AOX1	ENST00000374700	human	ensembl	74_37	+1	known	splice_site	c.589-1	e8-1	0.990	-	-	-	no_errors	AOX1	HGNC	ENSG00000138356	tier1	-	-	60	0	0.00	83	33	28.45
ARHGAP20	0	genome.wustl.edu	37	11	110485314	110485314	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	110485314	110485314	A	C	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	missense	c.601	p.F201V	1.000	pfam_Ras-assoc,pfscan_Ras-assoc	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727	tier1	-	-	120	0	0.00	87	40	31.50
ARHGAP5	0	genome.wustl.edu	37	14	32561296	32561296	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	32561296	32561296	T	C	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.1421	p.V474A	1.000	superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	rs200111638	-	141	0	0.00	188	17	8.25
ARHGAP5	0	genome.wustl.edu	37	14	32561313	32561313	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	32561313	32561313	C	T	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	nonsense	c.1438	p.R480*	1.000	superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	rs201986816	-	130	0	0.00	174	27	13.43
ARHGAP5	0	genome.wustl.edu	37	14	32561316	32561316	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	32561316	32561316	G	T	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	nonsense	c.1441	p.E481*	1.000	superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	rs200628183	-	129	0	0.00	162	29	15.18
ARHGAP5	0	genome.wustl.edu	37	14	32561340	32561340	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	32561340	32561340	G	A	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.1465	p.E489K	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	rs78337553	-	104	0	0.00	135	30	17.96
ARMC4	0	genome.wustl.edu	37	10	28233856	28233856	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	10	28233856	28233856	A	G	SNP	ARMC4	ENST00000305242	human	ensembl	74_37	-1	known	silent	c.1422	p.C474	0.891	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_GSKIP_dom,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC4	HGNC	ENSG00000169126	tier1	-	-	117	0	0.00	51	41	44.57
ATP10A	0	genome.wustl.edu	37	15	25925360	25925360	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	25925360	25925360	C	T	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	silent	c.3774	p.P1258	0.940	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	204	0	0.00	150	65	30.23
AXIN1	0	genome.wustl.edu	37	16	347814	347814	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	347814	347814	C	T	SNP	AXIN1	ENST00000262320	human	ensembl	74_37	-1	known	nonsense	c.1692	p.W564*	1.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN1	HGNC	ENSG00000103126	tier1	-	-	44	0	0.00	11	10	47.62
C11orf95	0	genome.wustl.edu	37	11	63533335	63533337	+	RNA	DEL	TCC	TCC	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	63533335	63533337	TCC	-	DEL	C11orf95	ENST00000338498	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.630:0.736:0.723	-	-	-	no_errors	C11orf95	HGNC	ENSG00000188070	tier1			8	0	0.00	4	2	33.33
C14orf177	0	genome.wustl.edu	37	14	99183532	99183532	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	99183532	99183532	C	T	SNP	C14orf177	ENST00000325812	human	ensembl	74_37	+1	known	missense	c.299	p.S100L	0.005	NULL	NULL	-	no_errors	C14orf177	HGNC	ENSG00000176605	tier1	rs143969442	-	100	0	0.00	88	7	7.37
C1QL4	0	genome.wustl.edu	37	12	49729919	49729919	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	49729919	49729919	C	T	SNP	C1QL4	ENST00000334221	human	ensembl	74_37	-1	known	silent	c.342	p.A114	0.177	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QL4	HGNC	ENSG00000186897	tier1	-	-	37	0	0.00	26	23	46.94
C7orf33	0	genome.wustl.edu	37	7	148288045	148288045	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	148288045	148288045	C	T	SNP	C7orf33	ENST00000307003	human	ensembl	74_37	+1	known	missense	c.28	p.L10F	0.003	NULL	NULL	-	no_errors	C7orf33	HGNC	ENSG00000170279	tier1	-	-	86	0	0.00	49	18	26.87
C8orf34	0	genome.wustl.edu	37	8	69552617	69552617	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	69552617	69552617	T	C	SNP	C8orf34	ENST00000518698	human	ensembl	74_37	+1	known	missense	c.1112	p.L371P	1.000	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C8orf34	HGNC	ENSG00000165084	tier1	-	-	76	0	0.00	47	30	38.96
CCDC173	0	genome.wustl.edu	37	2	170531264	170531264	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	170531264	170531264	T	G	SNP	CCDC173	ENST00000447353	human	ensembl	74_37	-1	known	missense	c.484	p.S162R	1.000	NULL	NULL	-	no_errors	CCDC173	HGNC	ENSG00000154479	tier1	-	-	25	0	0.00	17	14	45.16
CCDC178	0	genome.wustl.edu	37	18	30950133	30950133	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	30950133	30950133	A	C	SNP	CCDC178	ENST00000406524	human	ensembl	74_37	-1	known	missense	c.229	p.F77V	0.962	NULL	NULL	-	no_errors	CCDC178	HGNC	ENSG00000166960	tier1	-	-	49	0	0.00	11	19	63.33
CCT7	0	genome.wustl.edu	37	2	73477515	73477515	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	73477515	73477515	G	A	SNP	CCT7	ENST00000258091	human	ensembl	74_37	+1	known	silent	c.1152	p.E384	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,prints_Chaperone_TCP-1,tigrfam_Chap_CCT_eta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_eta	-	no_errors	CCT7	HGNC	ENSG00000135624	tier1	-	-	195	0	0.00	114	56	32.94
CD1C	0	genome.wustl.edu	37	1	158262019	158262019	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	158262019	158262019	G	T	SNP	CD1C	ENST00000368170	human	ensembl	74_37	+1	known	missense	c.474	p.L158F	0.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1C	HGNC	ENSG00000158481	tier1	-	-	350	0	0.00	233	143	38.03
CD74	0	genome.wustl.edu	37	5	149786487	149786487	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	149786487	149786487	G	A	SNP	CD74	ENST00000009530	human	ensembl	74_37	-1	known	missense	c.335	p.P112L	0.553	pfam_MHC_II-assoc_invar/CLIP_MHC-bd,pirsf_MHC_II-assoc_invar_chain,prints_MHC_II-assoc_invar_chain	pfam_MHC_II-assoc_invar/CLIP_MHC-bd,pfam_MHC_II-assoc_invariant_trimer,pfam_Thyroglobulin_1,superfamily_MHC_II-assoc_invariant_trimer,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_MHC_II-assoc_invar_chain,pfscan_Thyroglobulin_1,prints_MHC_II-assoc_invar_chain	-	no_errors	CD74	HGNC	ENSG00000019582	tier1	-	-	14	0	0.00	10	9	47.37
CD97	0	genome.wustl.edu	37	19	14507981	14507981	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	14507981	14507981	G	A	SNP	CD97	ENST00000242786	human	ensembl	74_37	+1	known	missense	c.571	p.G191S	0.966	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_CD97,prints_GPCR_2_secretin-like,prints_GPCR_2_EMR1_rcpt	-	no_errors	CD97	HGNC	ENSG00000123146	tier1	-	-	196	0	0.00	125	63	33.51
CDH12	0	genome.wustl.edu	37	5	21755708	21755708	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	21755708	21755708	A	T	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	missense	c.1877	p.I626K	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162	tier1	-	-	63	0	0.00	41	6	12.77
CDH12	0	genome.wustl.edu	37	5	21755928	21755928	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	21755928	21755928	G	A	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	nonsense	c.1657	p.R553*	0.986	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162	tier1	-	-	119	0	0.00	21	105	82.68
CDH23	0	genome.wustl.edu	37	10	73326592	73326592	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	10	73326592	73326592	T	A	SNP	CDH23	ENST00000461841	human	ensembl	74_37	+1	known	missense	c.658	p.S220T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				50	0	0.00	34	4	10.53
CELSR2	0	genome.wustl.edu	37	1	109795735	109795735	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	109795735	109795735	C	T	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.3034	p.R1012C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126	tier1	-	-	101	0	0.00	76	51	40.16
CHAF1A	0	genome.wustl.edu	37	19	4432024	4432024	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	4432024	4432024	G	A	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.2023	p.G675R	1.000	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670	tier1	-	-	157	0	0.00	90	56	38.36
CLNK	0	genome.wustl.edu	37	4	10599604	10599605	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	10599604	10599605	-	T	INS	CLNK	ENST00000226951	human	ensembl	74_37	-1	known	frame_shift_ins	c.81_80	p.N27fs	0.904:0.918	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	CLNK	HGNC	ENSG00000109684	tier1			12	0	0.00	8	2	20.00
CNTLN	0	genome.wustl.edu	37	9	17330727	17330727	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	17330727	17330727	A	C	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	missense	c.1439	p.E480A	0.997	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	tier1	-	-	221	0	0.00	114	7	5.79
CPAMD8	0	genome.wustl.edu	37	19	17025610	17025610	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	17025610	17025610	C	G	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.3784	p.V1262L	1.000	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111	tier1	-	-	51	0	0.00	43	30	41.10
CREBBP	0	genome.wustl.edu	37	16	3807913	3807913	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	3807913	3807913	C	T	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	missense	c.3506	p.R1169H	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	tier1	-	-	128	0	0.00	24	53	67.09
DEDD	0	genome.wustl.edu	37	1	161092113	161092113	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	161092113	161092113	G	A	SNP	DEDD	ENST00000368005	human	ensembl	74_37	-1	known	missense	c.871	p.R291C	1.000	NULL	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	-	no_errors	DEDD	HGNC	ENSG00000158796	tier1	-	-	108	0	0.00	59	54	47.79
DNAI2	0	genome.wustl.edu	37	17	72308268	72308268	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	72308268	72308268	C	G	SNP	DNAI2	ENST00000311014	human	ensembl	74_37	+1	known	missense	c.1621	p.L541V	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI2	HGNC	ENSG00000171595	tier1	-	-	32	0	0.00	34	12	25.53
DOCK4	0	genome.wustl.edu	37	7	111377017	111377017	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	111377017	111377017	C	T	SNP	DOCK4	ENST00000428084	human	ensembl	74_37	-1	known	missense	c.5261	p.G1754E	0.714	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK4	HGNC	ENSG00000128512	tier1	-	-	21	0	0.00	12	6	33.33
DSCAML1	0	genome.wustl.edu	37	11	117306508	117306508	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	117306508	117306508	A	C	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.4908	p.I1636M	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103	tier1	-	-	124	0	0.00	73	47	39.17
DYNC2H1	0	genome.wustl.edu	37	11	103175351	103175351	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	103175351	103175351	T	G	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.11305	p.L3769V	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	48	0	0.00	40	27	40.30
EMILIN2	0	genome.wustl.edu	37	18	2890589	2890589	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	2890589	2890589	G	T	SNP	EMILIN2	ENST00000254528	human	ensembl	74_37	+1	known	missense	c.464	p.R155M	0.988	NULL	pfam_EMI_domain,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	EMILIN2	HGNC	ENSG00000132205	tier1	-	-	99	0	0.00	56	64	53.33
ENSG00000234978	0	genome.wustl.edu	37	1	142803892	142803892	+	RNA	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	142803892	142803892	G	A	SNP	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978	tier1	-	-	10	0	0.00	7	5	41.67
ENSG00000261727	0	genome.wustl.edu	37	16	32095619	32095619	+	RNA	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	32095619	32095619	G	A	SNP	ENSG00000261727	ENST00000566806	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-1166P10.6	Clone_based_vega_gene	ENSG00000261727	tier1	-	-	33	0	0.00	27	6	18.18
EPHA3	0	genome.wustl.edu	37	3	89259055	89259055	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	89259055	89259055	A	G	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	missense	c.199	p.T67A	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524	tier1	-	-	54	0	0.00	33	14	29.79
EPHB1	0	genome.wustl.edu	37	3	134873017	134873017	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	134873017	134873017	C	T	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.1321	p.H441Y	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	293	0	0.00	155	96	38.25
ETV4	0	genome.wustl.edu	37	17	41606053	41606053	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	41606053	41606053	A	G	SNP	ETV4	ENST00000319349	human	ensembl	74_37	-1	known	missense	c.1289	p.L430S	1.000	NULL	pfam_ETS_PEA3_N,pfam_Ets_dom,smart_Ets_dom,prints_Ets_dom,pfscan_Ets_dom	-	no_errors	ETV4	HGNC	ENSG00000175832	tier1	-	-	97	0	0.00	57	23	28.75
EXD3	0	genome.wustl.edu	37	9	140242607	140242607	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	140242607	140242607	C	A	SNP	EXD3	ENST00000340951	human	ensembl	74_37	-1	known	silent	c.1914	p.L638	1.000	pfam_Mut7-C_RNAse_dom	pfam_Mut7-C_RNAse_dom,pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD3	HGNC	ENSG00000187609	tier1	-	-	27	0	0.00	21	11	34.38
EXO1	0	genome.wustl.edu	37	1	242035502	242035502	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	242035502	242035502	C	T	SNP	EXO1	ENST00000348581	human	ensembl	74_37	+1	known	missense	c.1436	p.T479M	0.000	NULL	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	EXO1	HGNC	ENSG00000174371	tier1	-	-	118	0	0.00	103	7	6.36
FANCM	0	genome.wustl.edu	37	14	45650671	45650671	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	45650671	45650671	G	A	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.4261	p.E1421K	0.980	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	94	0	0.00	94	37	28.24
FAT2	0	genome.wustl.edu	37	5	150889712	150889712	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	150889712	150889712	G	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	nonsense	c.11929	p.Q3977*	0.001	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	218	0	0.00	93	37	28.46
FAT2	0	genome.wustl.edu	37	5	150924479	150924479	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	150924479	150924479	A	T	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.6209	p.F2070Y	0.987	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	115	0	0.00	65	45	40.91
FGA	0	genome.wustl.edu	37	4	155510669	155510669	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	155510669	155510669	C	T	SNP	FGA	ENST00000302053	human	ensembl	74_37	-1	known	missense	c.100	p.V34M	0.004	NULL	pfam_Fibrinogen_a/b/g_C_dom,pfam_Fibrinogen_a/b/g_coil_dom,pfam_Fibrinogen_aC,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGA	HGNC	ENSG00000171560	tier1	-	-	165	0	0.00	107	7	6.14
FGD4	0	genome.wustl.edu	37	12	32772670	32772670	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	32772670	32772670	C	T	SNP	FGD4	ENST00000427716	human	ensembl	74_37	+1	known	silent	c.1377	p.S459	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD4	HGNC	ENSG00000139132	tier1	-	-	146	0	0.00	174	13	6.91
FGGY	0	genome.wustl.edu	37	1	59812016	59812017	+	Frame_Shift_Ins	INS	-	-	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	59812016	59812017	-	G	INS	FGGY	ENST00000303721	human	ensembl	74_37	+1	known	frame_shift_ins	c.411_412	p.V139fs	0.394:0.997	pfam_Carb_kinase_FGGY_N,tigrfam_Carb_kinase_FGGY-rel	pfam_Carb_kinase_FGGY_C,pfam_Carb_kinase_FGGY_N,tigrfam_Carb_kinase_FGGY-rel	-	no_errors	FGGY	HGNC	ENSG00000172456	tier1			75	0	0.00	66	22	25.00
FIGN	0	genome.wustl.edu	37	2	164468121	164468121	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	164468121	164468121	T	G	SNP	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	missense	c.221	p.K74T	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263	tier1	-	-	202	0	0.00	196	86	30.50
FITM2	0	genome.wustl.edu	37	20	42935516	42935516	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	42935516	42935516	G	A	SNP	FITM2	ENST00000396825	human	ensembl	74_37	-1	known	nonsense	c.538	p.R180*	0.010	pfam_FIT	pfam_FIT	-	no_errors	FITM2	HGNC	ENSG00000197296	tier1	-	-	88	0	0.00	47	38	44.71
FLG2	0	genome.wustl.edu	37	1	152331355	152331355	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	152331355	152331355	G	A	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	silent	c.6	p.T2	0.004	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520	tier1	-	-	94	0	0.00	70	35	33.33
FLNB	0	genome.wustl.edu	37	3	58111472	58111472	+	Splice_Site	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	58111472	58111472	T	C	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	splice_site	c.4061+2	e23+2	1.000	-	-	-	no_errors	FLNB	HGNC	ENSG00000136068	tier1	-	-	142	0	0.00	135	13	8.78
FLRT2	0	genome.wustl.edu	37	14	86088055	86088055	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	86088055	86088055	C	T	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	missense	c.197	p.T66I	1.000	smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070	tier1	-	-	160	0	0.00	99	46	31.51
FNDC3A	0	genome.wustl.edu	37	13	49772648	49772648	+	Silent	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	13	49772648	49772648	T	G	SNP	FNDC3A	ENST00000492622	human	ensembl	74_37	+1	known	silent	c.2925	p.T975	0.811	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3A	HGNC	ENSG00000102531	tier1	-	-	118	0	0.00	81	29	26.36
FUT1	0	genome.wustl.edu	37	19	49253837	49253837	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	49253837	49253837	A	G	SNP	FUT1	ENST00000310160	human	ensembl	74_37	-1	known	silent	c.702	p.G234	0.128	pfam_Glyco_trans_11	pfam_Glyco_trans_11	-	no_errors	FUT1	HGNC	ENSG00000174951	tier1	-	-	211	0	0.00	157	86	35.10
GLS	0	genome.wustl.edu	37	2	191797646	191797646	+	RNA	DEL	T	T	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	191797646	191797646	T	-	DEL	GLS	ENST00000471443	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.013	-	-	-	no_errors	GLS	HGNC	ENSG00000115419	tier1			13	0	0.00	22	4	15.38
GRM1	0	genome.wustl.edu	37	6	146351069	146351069	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	146351069	146351069	G	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.416	p.R139Q	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3_mtglu_rcpt_5	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	rs140910734	-	140	0	0.00	60	54	47.37
GRM1	0	genome.wustl.edu	37	6	146720814	146720814	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	146720814	146720814	A	C	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.2639	p.K880T	1.000	prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3_mtglu_rcpt_5	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	50	0	0.00	28	13	31.71
HCAR1	0	genome.wustl.edu	37	12	123214216	123214216	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	123214216	123214216	A	G	SNP	HCAR1	ENST00000356987	human	ensembl	74_37	-1	known	missense	c.671	p.V224A	0.946	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	HCAR1	HGNC	ENSG00000196917	tier1	-	-	87	0	0.00	71	26	26.26
HERC6	0	genome.wustl.edu	37	4	89304411	89304411	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	89304411	89304411	G	A	SNP	HERC6	ENST00000264346	human	ensembl	74_37	+1	known	missense	c.238	p.V80M	0.948	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC6	HGNC	ENSG00000138642	tier1	-	-	17	0	0.00	23	10	30.30
HMGCLL1	0	genome.wustl.edu	37	6	55443799	55443799	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	55443799	55443799	G	A	SNP	HMGCLL1	ENST00000398661	human	ensembl	74_37	-1	known	missense	c.55	p.R19W	1.000	NULL	pfam_PYR_CT,pfscan_PYR_CT	-	no_errors	HMGCLL1	HGNC	ENSG00000146151	tier1	-	-	44	0	0.00	38	32	45.07
HOMEZ	0	genome.wustl.edu	37	14	23744801	23744803	+	In_Frame_Del	DEL	CAT	CAT	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	CAT	CAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	23744801	23744803	CAT	-	DEL	HOMEZ	ENST00000431326	human	ensembl	74_37	-1	known	in_frame_del	c.1642_1640	p.D547in_frame_del	1.000:1.000:1.000	NULL	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOMEZ	HGNC	ENSG00000215271	tier1			10	0	0.00	4	3	42.86
HYDIN	0	genome.wustl.edu	37	16	70917863	70917863	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	70917863	70917863	G	A	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	silent	c.9939	p.A3313	0.013	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	81	0	0.00	30	64	68.09
IBSP	0	genome.wustl.edu	37	4	88732877	88732877	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	88732877	88732877	G	A	SNP	IBSP	ENST00000226284	human	ensembl	74_37	+1	known	missense	c.769	p.V257I	0.000	pfam_BSP_II	pfam_BSP_II	-	no_errors	IBSP	HGNC	ENSG00000029559	tier1	-	-	59	0	0.00	32	62	65.96
IGF2R	0	genome.wustl.edu	37	6	160501307	160501308	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	160501307	160501308	TG	-	DEL	IGF2R	ENST00000356956	human	ensembl	74_37	+1	known	frame_shift_del	c.5833	p.S1945fs	0.999	superfamily_Man6P_isomerase_rcpt-bd_dom	pfam_CIMR,pfam_FN_type2_col-bd,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	-	no_errors	IGF2R	HGNC	ENSG00000197081	tier1			87	0	0.00	61	26	29.89
IGFN1	0	genome.wustl.edu	37	1	201195101	201195101	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	201195101	201195101	G	A	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	missense	c.10636	p.E3546K	0.002	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395	tier1	rs146256261	-	76	0	0.00	60	24	28.57
IKZF1	0	genome.wustl.edu	37	7	50468308	50468308	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	50468308	50468308	C	T	SNP	IKZF1	ENST00000331340	human	ensembl	74_37	+1	known	missense	c.1543	p.R515C	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF1	HGNC	ENSG00000185811	tier1	-	-	39	0	0.00	21	22	51.16
KCNJ12	0	genome.wustl.edu	37	17	21319222	21319222	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	21319222	21319222	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.568	p.R190W	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185	tier1	-	-	130	0	0.00	106	18	14.52
KCNN2	0	genome.wustl.edu	37	5	113698764	113698764	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	113698764	113698764	G	A	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	missense	c.292	p.G98R	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709	tier1	-	-	21	0	0.00	20	9	31.03
KCNQ3	0	genome.wustl.edu	37	8	133175738	133175738	+	Silent	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	133175738	133175738	T	C	SNP	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	silent	c.1239	p.K413	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156	tier1	-	-	82	0	0.00	59	45	43.27
KCNT2	0	genome.wustl.edu	37	1	196302981	196302981	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	196302981	196302981	A	C	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.1993	p.L665V	0.282	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	38	0	0.00	21	15	41.67
KIF1A	0	genome.wustl.edu	37	2	241710439	241710439	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	241710439	241710439	G	A	SNP	KIF1A	ENST00000498729	human	ensembl	74_37	-1	known	silent	c.1290	p.H430	0.997	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294	tier1	-	-	75	0	0.00	18	23	56.10
KMT2D	0	genome.wustl.edu	37	12	49428199	49428199	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	49428199	49428199	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.10501	p.V3501M	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	32	0	0.00	15	20	57.14
L3MBTL1	0	genome.wustl.edu	37	20	42165076	42165076	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	42165076	42165076	G	A	SNP	L3MBTL1	ENST00000418998	human	ensembl	74_37	+1	known	silent	c.2085	p.K695	1.000	NULL	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513	tier1	-	-	138	0	0.00	132	56	29.79
L3MBTL4	0	genome.wustl.edu	37	18	6244515	6244515	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	6244515	6244515	G	A	SNP	L3MBTL4	ENST00000284898	human	ensembl	74_37	-1	known	missense	c.292	p.P98S	1.000	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_SAM_type1,pfam_Znf_C2HC,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL4	HGNC	ENSG00000154655	tier1	-	-	199	0	0.00	224	45	16.73
LAMB2	0	genome.wustl.edu	37	3	49161697	49161697	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	49161697	49161697	C	T	SNP	LAMB2	ENST00000305544	human	ensembl	74_37	-1	known	missense	c.3350	p.R1117H	0.029	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037	tier1	-	-	94	0	0.00	43	21	32.81
LAT2	0	genome.wustl.edu	37	7	73635050	73635052	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	73635050	73635052	GGA	-	DEL	LAT2	ENST00000275635	human	ensembl	74_37	+1	known	in_frame_del	c.318_320	p.E108in_frame_del	0.001:0.032:0.030	NULL	NULL	-	no_errors	LAT2	HGNC	ENSG00000086730	tier1			27	0	0.00	11	8	42.11
LOC440040	0	genome.wustl.edu	37	11	49597890	49597890	+	RNA	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	49597890	49597890	G	T	SNP	LOC440040	ENST00000527477	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-707M1.1	Clone_based_vega_gene	ENSG00000205035	tier1	-	-	79	0	0.00	25	23	47.92
LRRC37A2	0	genome.wustl.edu	37	17	44590246	44590246	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	44590246	44590246	G	A	SNP	LRRC37A2	ENST00000333412	human	ensembl	74_37	+1	known	silent	c.168	p.P56	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A2	HGNC	ENSG00000238083	tier1	-	-	283	0	0.00	224	72	24.32
LRRTM1	0	genome.wustl.edu	37	2	80530700	80530700	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	80530700	80530700	G	T	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	missense	c.245	p.A82D	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951	tier1	-	-	149	0	0.00	97	59	37.82
LRRTM4	0	genome.wustl.edu	37	2	77746764	77746764	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	77746764	77746764	T	G	SNP	LRRTM4	ENST00000409911	human	ensembl	74_37	-1	known	missense	c.234	p.K78N	0.903	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM4	HGNC	ENSG00000176204	tier1	-	-	139	0	0.00	88	52	37.14
MAGEL2	0	genome.wustl.edu	37	15	23889763	23889763	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	23889763	23889763	G	A	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.1318	p.R440C	0.831	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	69	0	0.00	31	29	47.54
MAP10	0	genome.wustl.edu	37	1	232942230	232942230	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	232942230	232942230	C	A	SNP	MAP10	ENST00000418460	human	ensembl	74_37	+1	known	silent	c.1461	p.P487	0.000	NULL	NULL	-	no_errors	MAP10	HGNC	ENSG00000212916	tier1	-	-	87	0	0.00	59	21	26.25
MAP2	0	genome.wustl.edu	37	2	210517907	210517907	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	210517907	210517907	C	A	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	silent	c.13	p.R5	1.000	NULL	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018	tier1	-	-	51	0	0.00	22	25	53.19
MBD6	0	genome.wustl.edu	37	12	57919816	57919817	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	57919816	57919817	-	T	INS	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_ins	c.1065_1066	p.S355fs	0.960:0.921	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987	tier1			105	0	0.00	70	46	39.66
MBD6	0	genome.wustl.edu	37	12	57919818	57919819	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	57919818	57919819	-	T	INS	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	frame_shift_ins	c.1067_1068	p.S357fs	0.894:0.883	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987	tier1			106	0	0.00	71	46	39.32
MC3R	0	genome.wustl.edu	37	20	54824819	54824819	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	54824819	54824819	G	A	SNP	MC3R	ENST00000243911	human	ensembl	74_37	+1	known	missense	c.920	p.R307H	1.000	pfam_7TM_GPCR_olfarory/Srsx,prints_Melcrt_ACTH_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melcrt_ACTH_rcpt,prints_Mcort_3_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC3R	HGNC	ENSG00000124089	tier1	-	-	218	0	0.00	135	98	42.06
MDH1B	0	genome.wustl.edu	37	2	207620043	207620043	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	207620043	207620043	C	T	SNP	MDH1B	ENST00000374412	human	ensembl	74_37	-1	known	silent	c.600	p.K200	0.000	NULL	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C	-	no_errors	MDH1B	HGNC	ENSG00000138400	tier1	-	-	73	0	0.00	72	41	36.28
METTL12	0	genome.wustl.edu	37	11	62433984	62433984	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	62433984	62433984	G	A	SNP	METTL12	ENST00000532971	human	ensembl	74_37	+1	known	missense	c.184	p.G62R	0.707	NULL	pfam_Methyltransf_11	-	no_errors	METTL12	HGNC	ENSG00000214756	tier1	-	-	123	0	0.00	83	42	33.60
MFSD2B	0	genome.wustl.edu	37	2	24236170	24236170	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	24236170	24236170	C	T	SNP	MFSD2B	ENST00000338315	human	ensembl	74_37	+1	known	missense	c.112	p.R38C	0.972	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD2B	HGNC	ENSG00000205639	tier1	-	-	40	0	0.00	6	17	73.91
MKL2	0	genome.wustl.edu	37	16	14340402	14340402	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	14340402	14340402	C	T	SNP	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	missense	c.1252	p.R418C	1.000	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260	tier1	-	-	83	0	0.00	10	35	77.78
MMEL1	0	genome.wustl.edu	37	1	2522439	2522439	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	2522439	2522439	C	T	SNP	MMEL1	ENST00000378412	human	ensembl	74_37	-1	known	missense	c.2330	p.R777H	1.000	pfam_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MMEL1	HGNC	ENSG00000142606				22	0	0.00	19	3	13.64
MRVI1	0	genome.wustl.edu	37	11	10597940	10597940	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	10597940	10597940	G	C	SNP	MRVI1	ENST00000421747	human	ensembl	74_37	-1	known	missense	c.2651	p.A884G	1.000	pfam_MRVI1	pfam_MRVI1	-	no_errors	MRVI1	HGNC	ENSG00000072952	tier1	-	-	60	0	0.00	12	31	72.09
MSANTD3	0	genome.wustl.edu	37	9	103204414	103204414	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	103204414	103204414	G	A	SNP	MSANTD3	ENST00000395067	human	ensembl	74_37	+1	known	missense	c.194	p.R65Q	1.000	NULL	NULL	-	no_errors	MSANTD3	HGNC	ENSG00000066697	tier1	-	-	60	0	0.00	33	27	45.00
MT-TS1	0	genome.wustl.edu	37	MT	7465	7466	+	RNA	INS	-	-	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	MT	7465	7466	0	C	INS	MT-TS1	ENST00000387416	human	ensembl	74_37	-1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TS1	HGNC	ENSG00000210151				121	0	0.00	78	7	8.24
MTR	0	genome.wustl.edu	37	1	237060403	237060403	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	237060403	237060403	G	A	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	silent	c.3696	p.K1232	0.993	superfamily_VitB12-dep_Met_synth_activ_dom,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	tier1	-	-	164	0	0.00	123	58	32.04
MYLK2	0	genome.wustl.edu	37	20	30414687	30414687	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	30414687	30414687	C	T	SNP	MYLK2	ENST00000375985	human	ensembl	74_37	+1	known	silent	c.1170	p.I390	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MYLK2	HGNC	ENSG00000101306	tier1	-	-	72	0	0.00	39	54	58.06
NGF	0	genome.wustl.edu	37	1	115829354	115829354	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	115829354	115829354	G	A	SNP	NGF	ENST00000369512	human	ensembl	74_37	-1	known	silent	c.63	p.H21	0.000	pirsf_Nerve_growth_factor-like,prints_Nerve_growth_factor_bsu_mml	pirsf_Nerve_growth_factor-like,pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel,prints_Nerve_growth_factor_bsu_mml,prints_Nerve_growth_factor_bsu,pfscan_Nerve_growth_factor-rel	-	no_errors	NGF	HGNC	ENSG00000134259	tier1	-	-	85	0	0.00	53	37	41.11
NIN	0	genome.wustl.edu	37	14	51224537	51224537	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	51224537	51224537	G	A	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	nonsense	c.3211	p.Q1071*	1.000	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503	tier1	-	-	250	0	0.00	182	193	51.33
NKX2-2	0	genome.wustl.edu	37	20	21492735	21492735	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	21492735	21492735	G	A	SNP	NKX2-2	ENST00000377142	human	ensembl	74_37	-1	known	silent	c.648	p.H216	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-2	HGNC	ENSG00000125820	tier1	-	-	62	0	0.00	66	43	39.45
NME5	0	genome.wustl.edu	37	5	137451362	137451362	+	RNA	DEL	T	T	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	137451362	137451362	T	-	DEL	NME5	ENST00000514481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NME5	HGNC	ENSG00000112981	tier1			62	0	0.00	35	5	12.50
NOTCH2NL	0	genome.wustl.edu	37	1	145290472	145290472	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	145290472	145290472	G	T	SNP	NOTCH2NL	ENST00000344859	human	ensembl	74_37	+1	known	missense	c.678	p.K226N	0.002	NULL	pfam_EG-like_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	NOTCH2NL	HGNC	ENSG00000213240	tier1	-	-	436	0	0.00	457	25	5.19
NPEPL1	0	genome.wustl.edu	37	20	57268891	57268891	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	57268891	57268891	G	A	SNP	NPEPL1	ENST00000356091	human	ensembl	74_37	+1	known	silent	c.249	p.V83	1.000	NULL	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	-	no_errors	NPEPL1	HGNC	ENSG00000215440	tier1	-	-	79	0	0.00	50	27	35.06
NRXN1	0	genome.wustl.edu	37	2	51253584	51253584	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	51253584	51253584	C	A	SNP	NRXN1	ENST00000404971	human	ensembl	74_37	-1	novel	missense	c.796	p.V266F	0.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915				21	0	0.00	27	4	12.90
NT5C1A	0	genome.wustl.edu	37	1	40131301	40131301	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	40131301	40131301	G	A	SNP	NT5C1A	ENST00000235628	human	ensembl	74_37	-1	known	missense	c.325	p.R109W	0.193	pfam_5-nucleotidase	pfam_5-nucleotidase	-	no_errors	NT5C1A	HGNC	ENSG00000116981	tier1	-	-	89	0	0.00	51	44	46.32
OR10K1	0	genome.wustl.edu	37	1	158435667	158435667	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	158435667	158435667	T	G	SNP	OR10K1	ENST00000289451	human	ensembl	74_37	+1	known	missense	c.316	p.F106V	0.949	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10K1	HGNC	ENSG00000173285	tier1	-	-	215	0	0.00	159	86	35.10
OR10K2	0	genome.wustl.edu	37	1	158389809	158389809	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	158389809	158389809	G	T	SNP	OR10K2	ENST00000314902	human	ensembl	74_37	-1	known	missense	c.848	p.P283Q	0.959	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10K2	HGNC	ENSG00000180708	tier1	-	-	123	0	0.00	77	34	30.63
OR4K14	0	genome.wustl.edu	37	14	20483297	20483297	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	20483297	20483297	G	T	SNP	OR4K14	ENST00000305045	human	ensembl	74_37	-1	known	missense	c.56	p.T19N	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K14	HGNC	ENSG00000169484	tier1	-	-	100	0	0.00	87	42	32.56
OR4P4	0	genome.wustl.edu	37	11	55405897	55405897	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	55405897	55405897	G	T	SNP	OR4P4	ENST00000314612	human	ensembl	74_37	+1	known	nonsense	c.64	p.E22*	0.019	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4P4	HGNC	ENSG00000181927	tier1	-	-	111	0	0.00	90	24	21.05
OR5D13	0	genome.wustl.edu	37	11	55541174	55541174	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	55541174	55541174	G	A	SNP	OR5D13	ENST00000361760	human	ensembl	74_37	+1	known	silent	c.261	p.L87	0.008	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D13	HGNC	ENSG00000198877	tier1	-	-	188	0	0.00	146	85	36.80
PALM2	0	genome.wustl.edu	37	9	112705558	112705558	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	112705558	112705558	C	T	SNP	PALM2	ENST00000448454	human	ensembl	74_37	+1	known	silent	c.1095	p.D365	0.901	pfam_Paralemmin	pfam_Paralemmin	-	no_errors	PALM2	HGNC	ENSG00000243444	tier1	-	-	171	0	0.00	101	58	36.25
PARP3	0	genome.wustl.edu	37	3	51977502	51977502	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	51977502	51977502	G	A	SNP	PARP3	ENST00000398755	human	ensembl	74_37	+1	known	missense	c.152	p.R51H	0.003	superfamily_WGR_domain	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_WGR_domain,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,smart_WGR_domain,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP3	HGNC	ENSG00000041880	tier1	-	-	30	0	0.00	26	4	13.33
PCDHGA4	0	genome.wustl.edu	37	5	140734952	140734952	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	140734952	140734952	G	A	SNP	PCDHGA4	ENST00000571252	human	ensembl	74_37	+1	known	missense	c.185	p.R62H	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA4	HGNC	ENSG00000262576	tier1	-	-	174	0	0.00	102	32	23.88
PDE3B	0	genome.wustl.edu	37	11	14666457	14666457	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	14666457	14666457	C	T	SNP	PDE3B	ENST00000282096	human	ensembl	74_37	+1	known	missense	c.836	p.S279F	0.282	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3B	HGNC	ENSG00000152270	tier1	-	-	143	0	0.00	83	6	6.67
PDE7B	0	genome.wustl.edu	37	6	136512828	136512828	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	136512828	136512828	C	A	SNP	PDE7B	ENST00000308191	human	ensembl	74_37	+1	known	missense	c.1203	p.N401K	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE7B	HGNC	ENSG00000171408	tier1	-	-	53	0	0.00	27	10	27.03
PDLIM7	0	genome.wustl.edu	37	5	176911090	176911090	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	176911090	176911090	G	A	SNP	PDLIM7	ENST00000355841	human	ensembl	74_37	-1	known	silent	c.1152	p.G384	0.954	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM7	HGNC	ENSG00000196923	tier1	-	-	98	0	0.00	54	19	26.03
PDZD3	0	genome.wustl.edu	37	11	119059814	119059814	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	119059814	119059814	G	T	SNP	PDZD3	ENST00000392817	human	ensembl	74_37	+1	known	missense	c.1586	p.R529M	0.042	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD3	HGNC	ENSG00000172367	tier1	-	-	66	0	0.00	36	33	47.83
PDZK1IP1	0	genome.wustl.edu	37	1	47650692	47650692	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	47650692	47650692	G	A	SNP	PDZK1IP1	ENST00000294338	human	ensembl	74_37	-1	known	missense	c.254	p.S85L	0.833	NULL	NULL	-	no_errors	PDZK1IP1	HGNC	ENSG00000162366	tier1	rs150391778	-	112	0	0.00	62	61	49.59
PHF21B	0	genome.wustl.edu	37	22	45312223	45312223	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	22	45312223	45312223	G	A	SNP	PHF21B	ENST00000313237	human	ensembl	74_37	-1	known	silent	c.501	p.T167	0.939	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21B	HGNC	ENSG00000056487	tier1	-	-	38	0	0.00	23	9	28.12
PHLPP2	0	genome.wustl.edu	37	16	71683255	71683255	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	71683255	71683255	G	C	SNP	PHLPP2	ENST00000356272	human	ensembl	74_37	-1	known	missense	c.3510	p.D1170E	0.994	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom	-	no_errors	PHLPP2	HGNC	ENSG00000040199	tier1	-	-	88	0	0.00	125	10	7.30
PLEKHA6	0	genome.wustl.edu	37	1	204199652	204199653	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	204199652	204199653	-	T	INS	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	frame_shift_ins	c.2472_2471	p.I825fs	1.000:1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	tier1			21	0	0.00	17	10	37.04
POU3F2	0	genome.wustl.edu	37	6	99282855	99282855	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	99282855	99282855	G	A	SNP	POU3F2	ENST00000328345	human	ensembl	74_37	+1	known	missense	c.106	p.E36K	1.000	pirsf_Transcription_factor_POU	pirsf_Transcription_factor_POU,pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F2	HGNC	ENSG00000184486	tier1	-	-	46	0	0.00	38	26	40.62
PTH1R	0	genome.wustl.edu	37	3	46940163	46940163	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	46940163	46940163	G	A	SNP	PTH1R	ENST00000313049	human	ensembl	74_37	+1	known	missense	c.650	p.C217Y	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_parathyroid_rcpt	-	no_errors	PTH1R	HGNC	ENSG00000160801	tier1	-	-	95	0	0.00	56	11	16.42
PTPRG	0	genome.wustl.edu	37	3	61547843	61547843	+	RNA	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	61547843	61547843	G	T	SNP	PTPRG	ENST00000475527	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.175	-	-	-	no_errors	PTPRG	HGNC	ENSG00000144724	tier1	-	-	17	0	0.00	11	6	33.33
PTPRJ	0	genome.wustl.edu	37	11	48158570	48158570	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	48158570	48158570	C	G	SNP	PTPRJ	ENST00000418331	human	ensembl	74_37	+1	known	missense	c.1889	p.S630C	0.872	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177				168	0	0.00	88	5	5.38
PTPRT	0	genome.wustl.edu	37	20	40744684	40744685	+	Frame_Shift_Ins	INS	-	-	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	40744684	40744685	-	G	INS	PTPRT	ENST00000373184	human	ensembl	74_37	-1	known	frame_shift_ins	c.3007_3006	p.G1002fs	1.000:1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	tier1			9	0	0.00	7	2	22.22
RAD51C	0	genome.wustl.edu	37	17	56772408	56772408	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	56772408	56772408	C	T	SNP	RAD51C	ENST00000337432	human	ensembl	74_37	+1	known	silent	c.262	p.L88	0.996	pfam_DNA_recomb/repair_Rad51_C,pirsf_DNA_recomb/repair_RecA-like	pfam_DNA_recomb/repair_Rad51_C,pfam_Circ_KaiC/RadA,superfamily_P-loop_NTPase,superfamily_DNA_repair_Rad51/TF_NusA_a-hlx,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	RAD51C	HGNC	ENSG00000108384	tier1	-	-	106	0	0.00	76	42	35.59
RBM10	0	genome.wustl.edu	37	X	47030585	47030585	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	X	47030585	47030585	T	G	SNP	RBM10	ENST00000377604	human	ensembl	74_37	+1	known	missense	c.360	p.D120E	0.997	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872	tier1	-	-	19	0	0.00	23	5	17.86
RD3	0	genome.wustl.edu	37	1	211652456	211652456	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	211652456	211652456	G	A	SNP	RD3	ENST00000367002	human	ensembl	74_37	-1	known	silent	c.510	p.S170	0.292	NULL	NULL	-	no_errors	RD3	HGNC	ENSG00000198570	tier1	-	-	29	0	0.00	15	8	34.78
REG1B	0	genome.wustl.edu	37	2	79312711	79312711	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	79312711	79312711	T	G	SNP	REG1B	ENST00000305089	human	ensembl	74_37	-1	known	missense	c.340	p.S114R	0.283	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG1B	HGNC	ENSG00000172023	tier1	-	-	99	0	0.00	41	30	42.25
RIMS2	0	genome.wustl.edu	37	8	104924394	104924394	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	104924394	104924394	C	A	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	silent	c.1806	p.G602	0.786	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	123	0	0.00	70	67	48.91
RPRD1B	0	genome.wustl.edu	37	20	36668908	36668908	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	36668908	36668908	C	T	SNP	RPRD1B	ENST00000373433	human	ensembl	74_37	+1	known	missense	c.223	p.P75S	1.000	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_CID_dom	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_CID_dom	-	no_errors	RPRD1B	HGNC	ENSG00000101413	tier1	-	-	127	0	0.00	114	72	38.71
SCN10A	0	genome.wustl.edu	37	3	38739984	38739984	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	38739984	38739984	C	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.4727	p.R1576H	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313	tier1	-	-	157	0	0.00	109	7	6.03
SETD2	0	genome.wustl.edu	37	3	47087998	47087998	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	47087998	47087998	C	A	SNP	SETD2	ENST00000409792	human	ensembl	74_37	-1	known	silent	c.7077	p.G2359	0.956	NULL	pfam_SRI,pfam_SET_dom,pfam_WW_dom,superfamily_WW_dom,superfamily_Ferritin-like_SF,smart_AWS,smart_SET_dom,smart_Post-SET_dom,smart_WW_dom,pfscan_AWS,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_WW_dom	-	no_errors	SETD2	HGNC	ENSG00000181555	tier1	-	-	82	0	0.00	46	32	41.03
SLC32A1	0	genome.wustl.edu	37	20	37353700	37353700	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	37353700	37353700	C	T	SNP	SLC32A1	ENST00000217420	human	ensembl	74_37	+1	known	silent	c.333	p.H111	0.791	NULL	pfam_AA_transpt_TM	-	no_errors	SLC32A1	HGNC	ENSG00000101438	tier1	-	-	149	0	0.00	93	51	35.42
SLC38A4	0	genome.wustl.edu	37	12	47173568	47173568	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	47173568	47173568	T	C	SNP	SLC38A4	ENST00000266579	human	ensembl	74_37	-1	known	missense	c.653	p.N218S	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A4	HGNC	ENSG00000139209	tier1	-	-	74	0	0.00	54	8	12.90
SLCO4C1	0	genome.wustl.edu	37	5	101592894	101592894	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	101592894	101592894	A	C	SNP	SLCO4C1	ENST00000310954	human	ensembl	74_37	-1	known	missense	c.1394	p.L465R	0.027	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO4C1	HGNC	ENSG00000173930	tier1	-	-	87	0	0.00	138	18	11.54
SMARCA4	0	genome.wustl.edu	37	19	11141427	11141427	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	11141427	11141427	G	A	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3404	p.R1135Q	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	19	0	0.00	16	8	33.33
SMCHD1	0	genome.wustl.edu	37	18	2732472	2732472	+	Silent	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	2732472	2732472	T	G	SNP	SMCHD1	ENST00000320876	human	ensembl	74_37	+1	known	silent	c.3258	p.A1086	0.852	NULL	pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_HATPase_ATP-bd,smart_SMC_hinge	-	no_errors	SMCHD1	HGNC	ENSG00000101596	tier1	-	-	26	0	0.00	14	9	39.13
SON	0	genome.wustl.edu	37	21	34921914	34921914	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	21	34921914	34921914	A	-	DEL	SON	ENST00000356577	human	ensembl	74_37	+1	known	frame_shift_del	c.377	p.K128fs	1.000	NULL	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_dsRNA-bd_dom	-	no_errors	SON	HGNC	ENSG00000159140	tier1			49	0	0.00	40	3	6.98
SPATA21	0	genome.wustl.edu	37	1	16736338	16736338	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	16736338	16736338	C	T	SNP	SPATA21	ENST00000335496	human	ensembl	74_37	-1	known	silent	c.345	p.R115	0.004	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	SPATA21	HGNC	ENSG00000187144	tier1	-	-	64	0	0.00	70	5	6.67
SPTBN5	0	genome.wustl.edu	37	15	42145460	42145460	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	42145460	42145460	G	A	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.10166	p.A3389V	0.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877				89	0	0.00	77	6	7.23
SYNE3	0	genome.wustl.edu	37	14	95906003	95906003	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	95906003	95906003	C	T	SNP	SYNE3	ENST00000334258	human	ensembl	74_37	-1	known	missense	c.2192	p.R731K	0.162	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_KASH,pfam_Spectrin_repeat,superfamily_Retrov_capsid_C,smart_Spectrin/alpha-actinin,pfscan_KASH	-	no_errors	SYNE3	HGNC	ENSG00000176438	tier1	-	-	97	0	0.00	39	27	40.91
SYT4	0	genome.wustl.edu	37	18	40850383	40850383	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	40850383	40850383	C	A	SNP	SYT4	ENST00000255224	human	ensembl	74_37	-1	known	missense	c.1201	p.G401C	0.958	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT4	HGNC	ENSG00000132872	tier1	-	-	244	0	0.00	194	25	11.42
SYT8	0	genome.wustl.edu	37	11	1858548	1858548	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	1858548	1858548	C	A	SNP	SYT8	ENST00000381968	human	ensembl	74_37	+1	known	missense	c.1093	p.H365N	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT8	HGNC	ENSG00000149043	tier1	-	-	35	0	0.00	4	20	83.33
TAPT1	0	genome.wustl.edu	37	4	16227881	16227881	+	Splice_Site	DEL	C	C	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	16227881	16227881	C	-	DEL	TAPT1	ENST00000405303	human	ensembl	74_37	-1	known	splice_site_del	c.199+1	e1+1	1.000	-	-	-	no_errors	TAPT1	HGNC	ENSG00000169762	tier1			8	0	0.00	4	2	33.33
TGIF2LY	0	genome.wustl.edu	37	Y	3447740	3447740	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	Y	3447740	3447740	C	A	SNP	TGIF2LY	ENST00000321217	human	ensembl	74_37	+1	known	missense	c.455	p.T152K	0.035	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TGIF2LY	HGNC	ENSG00000176679	tier1	-	-	51	0	0.00	12	42	77.78
TGM3	0	genome.wustl.edu	37	20	2298127	2298127	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	2298127	2298127	G	A	SNP	TGM3	ENST00000381458	human	ensembl	74_37	+1	known	missense	c.979	p.V327I	0.001	pfam_Transglutaminase-like,smart_Transglutaminase-like	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM3	HGNC	ENSG00000125780	tier1	-	-	225	0	0.00	148	111	42.86
TMEM39B	0	genome.wustl.edu	37	1	32557495	32557495	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	32557495	32557495	C	T	SNP	TMEM39B	ENST00000456834	human	ensembl	74_37	+1	known	missense	c.655	p.H219Y	1.000	NULL	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39B	HGNC	ENSG00000121775	tier1	-	-	71	0	0.00	59	31	34.44
TNFRSF25	0	genome.wustl.edu	37	1	6521564	6521564	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	6521564	6521564	G	A	SNP	TNFRSF25	ENST00000377782	human	ensembl	74_37	-1	known	missense	c.1211	p.A404V	0.995	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_25,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF25	HGNC	ENSG00000215788	tier1	-	-	22	0	0.00	23	14	37.84
TNN	0	genome.wustl.edu	37	1	175049525	175049525	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	175049525	175049525	A	C	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	missense	c.1011	p.E337D	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332	tier1	-	-	107	0	0.00	97	39	28.68
TP63	0	genome.wustl.edu	37	3	189526314	189526314	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	189526314	189526314	C	T	SNP	TP63	ENST00000264731	human	ensembl	74_37	+1	known	missense	c.578	p.T193M	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_SAM_2,superfamily_p53-like_TF_DNA-bd,superfamily_SAM/pointed,superfamily_p53_tetrameristn,smart_SAM,prints_p53_tumour_suppressor	-	no_errors	TP63	HGNC	ENSG00000073282	tier1	-	-	126	0	0.00	126	35	21.74
TRPM3	0	genome.wustl.edu	37	9	73442845	73442845	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	73442845	73442845	G	A	SNP	TRPM3	ENST00000423814	human	ensembl	74_37	-1	known	silent	c.897	p.N299	0.978	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067	tier1	rs201646902	-	203	0	0.00	129	58	31.02
TTN	0	genome.wustl.edu	37	2	179427899	179427899	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	179427899	179427899	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.75256	p.V25086I	0.956	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	275	0	0.00	179	181	50.28
TTN	0	genome.wustl.edu	37	2	179606168	179606168	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	179606168	179606168	T	C	SNP	TTN	ENST00000342175	human	ensembl	74_37	-1	known	missense	c.11279	p.K3760R	0.925	superfamily_RNaseH-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	263	0	0.00	169	189	52.79
TUFM	0	genome.wustl.edu	37	16	28856763	28856763	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	28856763	28856763	C	T	SNP	TUFM	ENST00000313511	human	ensembl	74_37	-1	known	missense	c.286	p.E96K	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,tigrfam_Transl_elong_EFTu/EF1A_bac/org	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom,tigrfam_Transl_elong_EFTu/EF1A_bac/org	-	no_errors	TUFM	HGNC	ENSG00000178952	tier1	-	-	137	0	0.00	30	48	61.54
UBQLNL	0	genome.wustl.edu	37	11	5537522	5537522	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	5537522	5537522	G	A	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	silent	c.150	p.I50	0.740	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518	tier1	-	-	110	0	0.00	22	55	71.43
UNC93B1	0	genome.wustl.edu	37	11	67759287	67759287	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	67759287	67759287	C	A	SNP	UNC93B1	ENST00000227471	human	ensembl	74_37	-1	known	silent	c.1521	p.A507	0.000	NULL	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93B1	HGNC	ENSG00000110057	tier1	-	-	14	0	0.00	9	4	30.77
USH2A	0	genome.wustl.edu	37	1	215821930	215821930	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	215821930	215821930	G	A	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.14522	p.A4841V	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	115	0	0.00	72	45	38.46
USP19	0	genome.wustl.edu	37	3	49153507	49153507	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	49153507	49153507	C	T	SNP	USP19	ENST00000398888	human	ensembl	74_37	-1	known	missense	c.1141	p.G381R	1.000	superfamily_HSP20-like_chaperone,pfscan_CS_dom	pfam_Peptidase_C19/C67,pfam_Znf_MYND,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom,pfscan_Znf_MYND,pfscan_Peptidase_C19/C67	-	no_errors	USP19	HGNC	ENSG00000172046	tier1	-	-	84	0	0.00	56	6	9.68
USP39	0	genome.wustl.edu	37	2	85843575	85843575	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	85843575	85843575	G	A	SNP	USP39	ENST00000409470	human	ensembl	74_37	+1	known	missense	c.257	p.R86Q	1.000	NULL	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP39	HGNC	ENSG00000168883	tier1	-	-	27	0	0.00	13	18	58.06
VWA5A	0	genome.wustl.edu	37	11	124012335	124012335	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	124012335	124012335	C	A	SNP	VWA5A	ENST00000392748	human	ensembl	74_37	+1	known	missense	c.1910	p.P637H	0.000	NULL	pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5A	HGNC	ENSG00000110002	tier1	-	-	160	0	0.00	105	72	40.45
WASH3P	0	genome.wustl.edu	37	15	102516424	102516424	+	RNA	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	102516424	102516424	G	T	SNP	WASH3P	ENST00000557932	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596	tier1	rs201105823	-	59	0	0.00	63	7	10.00
WDFY3	0	genome.wustl.edu	37	4	85638087	85638087	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	85638087	85638087	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.7837	p.D2613N	1.000	NULL	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	tier1	-	-	180	0	0.00	155	140	47.46
WDR19	0	genome.wustl.edu	37	4	39269634	39269634	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	39269634	39269634	G	A	SNP	WDR19	ENST00000399820	human	ensembl	74_37	+1	known	missense	c.3281	p.R1094H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR19	HGNC	ENSG00000157796	tier1	-	-	33	0	0.00	5	5	50.00
WIPF3	0	genome.wustl.edu	37	7	29929023	29929023	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	29929023	29929023	A	C	SNP	WIPF3	ENST00000242140	human	ensembl	74_37	+1	known	missense	c.1351	p.S451R	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WIPF3	HGNC	ENSG00000122574	tier1	-	-	40	0	0.00	28	17	37.78
WISP3	0	genome.wustl.edu	37	6	112388225	112388225	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	112388225	112388225	C	T	SNP	WISP3	ENST00000368664	human	ensembl	74_37	+1	known	silent	c.697	p.L233	0.754	NULL	pfam_IGFBP-like,smart_IGFBP-like	-	no_errors	WISP3	HGNC	ENSG00000112761	tier1	-	-	90	0	0.00	35	40	53.33
ZNF135	0	genome.wustl.edu	37	19	58574826	58574826	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	58574826	58574826	C	T	SNP	ZNF135	ENST00000401053	human	ensembl	74_37	+1	known	missense	c.209	p.P70L	0.000	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF135	HGNC	ENSG00000176293	tier1	-	-	87	0	0.00	56	26	31.71
ZNF208	0	genome.wustl.edu	37	19	22157258	22157258	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	22157258	22157258	C	G	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	missense	c.578	p.R193T	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	tier1	-	-	93	0	0.00	49	39	44.32
ZNF442	0	genome.wustl.edu	37	19	12461806	12461806	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	12461806	12461806	C	T	SNP	ZNF442	ENST00000242804	human	ensembl	74_37	-1	known	missense	c.593	p.R198K	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF442	HGNC	ENSG00000198342	tier1	-	-	179	0	0.00	126	60	32.26
ZNF492	0	genome.wustl.edu	37	19	22847578	22847578	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	22847578	22847578	A	G	SNP	ZNF492	ENST00000456783	human	ensembl	74_37	+1	known	silent	c.1107	p.V369	0.380	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF492	HGNC	ENSG00000229676	tier1	-	-	36	0	0.00	27	11	28.95
ZNF676	0	genome.wustl.edu	37	19	22364124	22364124	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	22364124	22364124	T	G	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.395	p.K132T	0.007	NULL	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109	tier1	-	-	193	0	0.00	76	82	51.90
ZNF677	0	genome.wustl.edu	37	19	53754852	53754852	+	RNA	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	53754852	53754852	A	G	SNP	ZNF677	ENST00000595293	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.175	-	-	-	no_errors	ZNF677	HGNC	ENSG00000197928	tier1	-	-	39	0	0.00	9	50	84.75
ZNF780B	0	genome.wustl.edu	37	19	40542132	40542132	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	40542132	40542132	G	A	SNP	ZNF780B	ENST00000434248	human	ensembl	74_37	-1	known	nonsense	c.634	p.Q212*	0.891	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF780B	HGNC	ENSG00000128000	tier1	-	-	94	0	0.00	24	66	73.33
ZNF92	0	genome.wustl.edu	37	7	64863276	64863276	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	64863276	64863276	A	G	SNP	ZNF92	ENST00000328747	human	ensembl	74_37	+1	known	silent	c.249	p.Q83	0.007	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF92	HGNC	ENSG00000146757	tier1	-	-	78	0	0.00	39	26	40.00
CELSR2	0	genome.wustl.edu	37	1	109795735	109795735	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	109795735	109795735	C	T	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.3034	p.R1012C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				93	0	0	65	47	41.9643
NGF	0	genome.wustl.edu	37	1	115829354	115829354	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	115829354	115829354	G	A	SNP	NGF	ENST00000369512	human	ensembl	74_37	-1	known	silent	c.63	p.H21	0.000	pirsf_Nerve_growth_factor-like,prints_Nerve_growth_factor_bsu_mml	pirsf_Nerve_growth_factor-like,pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel,prints_Nerve_growth_factor_bsu_mml,prints_Nerve_growth_factor_bsu,pfscan_Nerve_growth_factor-rel	-	no_errors	NGF	HGNC	ENSG00000134259				80	0	0	51	35	40.6977
ENSG00000234978	0	genome.wustl.edu	37	1	142803892	142803892	+	RNA	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	142803892	142803892	G	A	SNP	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978				9	0	0	7	3	30
NOTCH2NL	0	genome.wustl.edu	37	1	145290472	145290472	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	145290472	145290472	G	T	SNP	NOTCH2NL	ENST00000344859	human	ensembl	74_37	+1	known	missense	c.678	p.K226N	0.002	NULL	pfam_EG-like_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	NOTCH2NL	HGNC	ENSG00000213240				357	0	0	376	20	5.05051
FLG2	0	genome.wustl.edu	37	1	152331355	152331355	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	152331355	152331355	G	A	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	silent	c.6	p.T2	0.004	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520				88	0	0	62	34	35.4167
CD1C	0	genome.wustl.edu	37	1	158262019	158262019	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	158262019	158262019	G	T	SNP	CD1C	ENST00000368170	human	ensembl	74_37	+1	known	missense	c.474	p.L158F	0.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1C	HGNC	ENSG00000158481				328	0	0	213	132	38.2609
OR10K2	0	genome.wustl.edu	37	1	158389809	158389809	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	158389809	158389809	G	T	SNP	OR10K2	ENST00000314902	human	ensembl	74_37	-1	known	missense	c.848	p.P283Q	0.959	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10K2	HGNC	ENSG00000180708				115	0	0	71	32	31.068
OR10K1	0	genome.wustl.edu	37	1	158435667	158435667	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	158435667	158435667	T	G	SNP	OR10K1	ENST00000289451	human	ensembl	74_37	+1	known	missense	c.316	p.F106V	0.949	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10K1	HGNC	ENSG00000173285				195	0	0	140	79	36.0731
ARHGAP30	0	genome.wustl.edu	37	1	161022270	161022270	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	161022270	161022270	A	G	SNP	ARHGAP30	ENST00000368013	human	ensembl	74_37	-1	known	silent	c.900	p.H300	0.989	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP30	HGNC	ENSG00000186517				325	1	0.306748	184	151	45.0746
DEDD	0	genome.wustl.edu	37	1	161092113	161092113	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	161092113	161092113	G	A	SNP	DEDD	ENST00000368005	human	ensembl	74_37	-1	known	missense	c.871	p.R291C	1.000	NULL	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	-	no_errors	DEDD	HGNC	ENSG00000158796				99	0	0	56	49	46.6667
SPATA21	0	genome.wustl.edu	37	1	16736338	16736338	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	16736338	16736338	C	T	SNP	SPATA21	ENST00000335496	human	ensembl	74_37	-1	known	silent	c.345	p.R115	0.004	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	SPATA21	HGNC	ENSG00000187144				60	0	0	66	5	7.04225
TNN	0	genome.wustl.edu	37	1	175049525	175049525	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	175049525	175049525	A	C	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	missense	c.1011	p.E337D	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332				96	0	0	86	34	28.3333
KCNT2	0	genome.wustl.edu	37	1	196302981	196302981	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	196302981	196302981	A	C	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.1993	p.L665V	0.282	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687				37	0	0	20	13	39.3939
IGFN1	0	genome.wustl.edu	37	1	201195101	201195101	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	201195101	201195101	G	A	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	missense	c.10636	p.E3546K	0.002	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395				69	0	0	52	21	28.7671
RD3	0	genome.wustl.edu	37	1	211652456	211652456	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	211652456	211652456	G	A	SNP	RD3	ENST00000367002	human	ensembl	74_37	-1	known	silent	c.510	p.S170	0.292	NULL	NULL	-	no_errors	RD3	HGNC	ENSG00000198570				28	0	0	14	7	33.3333
USH2A	0	genome.wustl.edu	37	1	215821930	215821930	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	215821930	215821930	G	A	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.14522	p.A4841V	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				106	0	0	68	42	38.1818
MAP10	0	genome.wustl.edu	37	1	232942230	232942230	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	232942230	232942230	C	A	SNP	MAP10	ENST00000418460	human	ensembl	74_37	+1	known	silent	c.1461	p.P487	0.000	NULL	NULL	-	no_errors	MAP10	HGNC	ENSG00000212916				83	0	0	55	21	27.6316
MTR	0	genome.wustl.edu	37	1	237060403	237060403	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	237060403	237060403	G	A	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	silent	c.3696	p.K1232	0.993	superfamily_VitB12-dep_Met_synth_activ_dom,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984				158	0	0	111	57	33.9286
RGS7	0	genome.wustl.edu	37	1	240966237	240966237	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	240966237	240966237	A	G	SNP	RGS7	ENST00000407727	human	ensembl	74_37	-1	known	silent	c.1326	p.S442	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_RGS_dom,pfam_G-protein_gamma-like_dom,pfam_DEP_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_G-protein_gamma-like_dom,smart_DEP_dom,smart_G-protein_gamma-like_dom,smart_Regulat_G_prot_signal_superfam,pfscan_DEP_dom,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS7	HGNC	ENSG00000182901				166	0	0	99	53	34.8684
EXO1	0	genome.wustl.edu	37	1	242035502	242035502	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	242035502	242035502	C	T	SNP	EXO1	ENST00000348581	human	ensembl	74_37	+1	known	missense	c.1436	p.T479M	0.000	NULL	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	EXO1	HGNC	ENSG00000174371				113	0	0	98	7	6.66667
OR2L8	0	genome.wustl.edu	37	1	248112379	248112379	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	248112379	248112379	T	C	SNP	OR2L8	ENST00000357191	human	ensembl	74_37	+1	known	missense	c.220	p.S74P	0.226	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L8	HGNC	ENSG00000196936				409	1	0.243902	258	131	33.6761
TMEM39B	0	genome.wustl.edu	37	1	32557495	32557495	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	32557495	32557495	C	T	SNP	TMEM39B	ENST00000456834	human	ensembl	74_37	+1	known	missense	c.655	p.H219Y	1.000	NULL	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39B	HGNC	ENSG00000121775				65	0	0	55	28	33.7349
NT5C1A	0	genome.wustl.edu	37	1	40131301	40131301	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	40131301	40131301	G	A	SNP	NT5C1A	ENST00000235628	human	ensembl	74_37	-1	known	missense	c.325	p.R109W	0.193	pfam_5-nucleotidase	pfam_5-nucleotidase	-	no_errors	NT5C1A	HGNC	ENSG00000116981				76	0	0	45	37	45.122
HIVEP3	0	genome.wustl.edu	37	1	42048426	42048426	+	Silent	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	42048426	42048426	T	C	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	silent	c.2043	p.T681	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				162	1	0.613497	87	60	40.8163
PDZK1IP1	0	genome.wustl.edu	37	1	47650692	47650692	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	47650692	47650692	G	A	SNP	PDZK1IP1	ENST00000294338	human	ensembl	74_37	-1	known	missense	c.254	p.S85L	0.833	NULL	NULL	-	no_errors	PDZK1IP1	HGNC	ENSG00000162366				100	0	0	56	55	49.5495
TNFRSF25	0	genome.wustl.edu	37	1	6521564	6521564	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	6521564	6521564	G	A	SNP	TNFRSF25	ENST00000377782	human	ensembl	74_37	-1	known	missense	c.1211	p.A404V	0.995	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_25,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF25	HGNC	ENSG00000215788				20	0	0	21	13	38.2353
CUBN	0	genome.wustl.edu	37	10	16992011	16992011	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	10	16992011	16992011	G	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.5069	p.A1690V	0.995	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				38	0	0	13	12	48
ARMC4	0	genome.wustl.edu	37	10	28233856	28233856	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	10	28233856	28233856	A	G	SNP	ARMC4	ENST00000305242	human	ensembl	74_37	-1	known	silent	c.1422	p.C474	0.891	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_GSKIP_dom,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC4	HGNC	ENSG00000169126				104	0	0	42	36	46.1538
ARID5B	0	genome.wustl.edu	37	10	63759868	63759868	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	10	63759868	63759868	C	T	SNP	ARID5B	ENST00000279873	human	ensembl	74_37	+1	known	missense	c.521	p.T174M	0.111	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID5B	HGNC	ENSG00000150347				74	0	0	47	4	7.84314
DYNC2H1	0	genome.wustl.edu	37	11	103175351	103175351	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	103175351	103175351	T	G	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.11305	p.L3769V	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240				47	0	0	36	27	42.8571
MRVI1	0	genome.wustl.edu	37	11	10597940	10597940	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	10597940	10597940	G	C	SNP	MRVI1	ENST00000421747	human	ensembl	74_37	-1	known	missense	c.2651	p.A884G	1.000	pfam_MRVI1	pfam_MRVI1	-	no_errors	MRVI1	HGNC	ENSG00000072952				57	0	0	12	29	70.7317
ARHGAP20	0	genome.wustl.edu	37	11	110485314	110485314	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	110485314	110485314	A	C	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	missense	c.601	p.F201V	1.000	pfam_Ras-assoc,pfscan_Ras-assoc	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727				101	0	0	76	37	32.7434
DSCAML1	0	genome.wustl.edu	37	11	117306508	117306508	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	117306508	117306508	A	C	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.4908	p.I1636M	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				115	0	0	64	41	39.0476
PDZD3	0	genome.wustl.edu	37	11	119059814	119059814	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	119059814	119059814	G	T	SNP	PDZD3	ENST00000392817	human	ensembl	74_37	+1	known	missense	c.1586	p.R529M	0.042	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD3	HGNC	ENSG00000172367				66	0	0	36	33	47.8261
VWA5A	0	genome.wustl.edu	37	11	124012335	124012335	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	124012335	124012335	C	A	SNP	VWA5A	ENST00000392748	human	ensembl	74_37	+1	known	missense	c.1910	p.P637H	0.000	NULL	pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5A	HGNC	ENSG00000110002				144	0	0	98	67	40.6061
PDE3B	0	genome.wustl.edu	37	11	14666457	14666457	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	14666457	14666457	C	T	SNP	PDE3B	ENST00000282096	human	ensembl	74_37	+1	known	missense	c.836	p.S279F	0.282	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3B	HGNC	ENSG00000152270				129	0	0	75	5	6.25
SYT8	0	genome.wustl.edu	37	11	1858548	1858548	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	1858548	1858548	C	A	SNP	SYT8	ENST00000381968	human	ensembl	74_37	+1	known	missense	c.1093	p.H365N	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT8	HGNC	ENSG00000149043				35	0	0	4	20	83.3333
LOC440040	0	genome.wustl.edu	37	11	49597890	49597890	+	RNA	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	49597890	49597890	G	T	SNP	LOC440040	ENST00000527477	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-707M1.1	Clone_based_vega_gene	ENSG00000205035				71	0	0	23	22	48.8889
UBQLNL	0	genome.wustl.edu	37	11	5537522	5537522	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	5537522	5537522	G	A	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	silent	c.150	p.I50	0.740	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518				102	0	0	22	52	70.2703
OR4P4	0	genome.wustl.edu	37	11	55405897	55405897	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	55405897	55405897	G	T	SNP	OR4P4	ENST00000314612	human	ensembl	74_37	+1	known	nonsense	c.64	p.E22*	0.019	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4P4	HGNC	ENSG00000181927				107	0	0	81	23	22.1154
OR5D13	0	genome.wustl.edu	37	11	55541174	55541174	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	55541174	55541174	G	A	SNP	OR5D13	ENST00000361760	human	ensembl	74_37	+1	known	silent	c.261	p.L87	0.008	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D13	HGNC	ENSG00000198877				171	0	0	131	81	38.2075
OR8J3	0	genome.wustl.edu	37	11	55905014	55905014	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	55905014	55905014	A	C	SNP	OR8J3	ENST00000301529	human	ensembl	74_37	-1	known	missense	c.181	p.F61V	0.590	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J3	HGNC	ENSG00000167822				170	1	0.584795	94	64	40.5063
METTL12	0	genome.wustl.edu	37	11	62433984	62433984	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	62433984	62433984	G	A	SNP	METTL12	ENST00000532971	human	ensembl	74_37	+1	known	missense	c.184	p.G62R	0.707	NULL	pfam_Methyltransf_11	-	no_errors	METTL12	HGNC	ENSG00000214756				113	0	0	74	41	35.6522
MSI1	0	genome.wustl.edu	37	12	120784019	120784019	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	120784019	120784019	C	T	SNP	MSI1	ENST00000257552	human	ensembl	74_37	-1	known	silent	c.966	p.A322	0.623	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MSI1	HGNC	ENSG00000135097				13	0	0	7	5	41.6667
HCAR1	0	genome.wustl.edu	37	12	123214216	123214216	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	123214216	123214216	A	G	SNP	HCAR1	ENST00000356987	human	ensembl	74_37	-1	known	missense	c.671	p.V224A	0.946	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	HCAR1	HGNC	ENSG00000196917				79	0	0	63	24	27.5862
ADIPOR2	0	genome.wustl.edu	37	12	1890115	1890115	+	Silent	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	1890115	1890115	T	C	SNP	ADIPOR2	ENST00000357103	human	ensembl	74_37	+1	known	silent	c.711	p.Y237	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	ADIPOR2	HGNC	ENSG00000006831				168	0	0	96	57	37.2549
FGD4	0	genome.wustl.edu	37	12	32772670	32772670	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	32772670	32772670	C	T	SNP	FGD4	ENST00000427716	human	ensembl	74_37	+1	known	silent	c.1377	p.S459	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD4	HGNC	ENSG00000139132				124	0	0	152	12	7.31707
SLC38A4	0	genome.wustl.edu	37	12	47173568	47173568	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	47173568	47173568	T	C	SNP	SLC38A4	ENST00000266579	human	ensembl	74_37	-1	known	missense	c.653	p.N218S	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A4	HGNC	ENSG00000139209				69	0	0	50	7	12.2807
KMT2D	0	genome.wustl.edu	37	12	49428199	49428199	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	49428199	49428199	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.10501	p.V3501M	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				29	0	0	15	19	55.8824
C1QL4	0	genome.wustl.edu	37	12	49729919	49729919	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	12	49729919	49729919	C	T	SNP	C1QL4	ENST00000334221	human	ensembl	74_37	-1	known	silent	c.342	p.A114	0.177	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QL4	HGNC	ENSG00000186897				31	0	0	23	19	45.2381
FNDC3A	0	genome.wustl.edu	37	13	49772648	49772648	+	Silent	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	13	49772648	49772648	T	G	SNP	FNDC3A	ENST00000492622	human	ensembl	74_37	+1	known	silent	c.2925	p.T975	0.811	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3A	HGNC	ENSG00000102531				106	0	0	75	28	27.1845
AHNAK2	0	genome.wustl.edu	37	14	105413513	105413513	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	105413513	105413513	C	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.8275	p.D2759Y	0.209	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				364	0	0	177	93	34.4444
OR4K14	0	genome.wustl.edu	37	14	20483297	20483297	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	20483297	20483297	G	T	SNP	OR4K14	ENST00000305045	human	ensembl	74_37	-1	known	missense	c.56	p.T19N	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K14	HGNC	ENSG00000169484				88	0	0	75	37	33.0357
FANCM	0	genome.wustl.edu	37	14	45650671	45650671	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	45650671	45650671	G	A	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.4261	p.E1421K	0.980	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790				76	0	0	84	33	28.2051
NIN	0	genome.wustl.edu	37	14	51224537	51224537	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	51224537	51224537	G	A	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	nonsense	c.3211	p.Q1071*	1.000	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503				233	0	0	171	178	51.0029
FLRT2	0	genome.wustl.edu	37	14	86088055	86088055	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	86088055	86088055	C	T	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	missense	c.197	p.T66I	1.000	smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070				149	0	0	90	44	32.8358
SYNE3	0	genome.wustl.edu	37	14	95906003	95906003	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	95906003	95906003	C	T	SNP	SYNE3	ENST00000334258	human	ensembl	74_37	-1	known	missense	c.2192	p.R731K	0.162	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_KASH,pfam_Spectrin_repeat,superfamily_Retrov_capsid_C,smart_Spectrin/alpha-actinin,pfscan_KASH	-	no_errors	SYNE3	HGNC	ENSG00000176438				89	0	0	35	26	42.623
C14orf177	0	genome.wustl.edu	37	14	99183532	99183532	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	14	99183532	99183532	C	T	SNP	C14orf177	ENST00000325812	human	ensembl	74_37	+1	known	missense	c.299	p.S100L	0.005	NULL	NULL	-	no_errors	C14orf177	HGNC	ENSG00000176605				86	0	0	75	7	8.53659
WASH3P	0	genome.wustl.edu	37	15	102516424	102516424	+	RNA	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	102516424	102516424	G	T	SNP	WASH3P	ENST00000557932	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596				51	0	0	58	7	10.7692
MAGEL2	0	genome.wustl.edu	37	15	23889763	23889763	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	23889763	23889763	G	A	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.1318	p.R440C	0.831	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585				62	0	0	27	26	49.0566
ATP10A	0	genome.wustl.edu	37	15	25925360	25925360	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	25925360	25925360	C	T	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	silent	c.3774	p.P1258	0.940	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190				188	0	0	136	61	30.9645
SPTBN5	0	genome.wustl.edu	37	15	42145460	42145460	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	15	42145460	42145460	G	A	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.10166	p.A3389V	0.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877				79	0	0	64	6	8.57143
MKL2	0	genome.wustl.edu	37	16	14340402	14340402	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	14340402	14340402	C	T	SNP	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	missense	c.1252	p.R418C	1.000	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260				78	0	0	10	35	77.7778
TUFM	0	genome.wustl.edu	37	16	28856763	28856763	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	28856763	28856763	C	T	SNP	TUFM	ENST00000313511	human	ensembl	74_37	-1	known	missense	c.286	p.E96K	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,tigrfam_Transl_elong_EFTu/EF1A_bac/org	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom,tigrfam_Transl_elong_EFTu/EF1A_bac/org	-	no_errors	TUFM	HGNC	ENSG00000178952				129	0	0	28	45	61.6438
AXIN1	0	genome.wustl.edu	37	16	347814	347814	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	347814	347814	C	T	SNP	AXIN1	ENST00000262320	human	ensembl	74_37	-1	known	nonsense	c.1692	p.W564*	1.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN1	HGNC	ENSG00000103126				42	0	0	11	10	47.619
CREBBP	0	genome.wustl.edu	37	16	3807913	3807913	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	3807913	3807913	C	T	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	missense	c.3506	p.R1169H	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339				114	0	0	22	45	67.1642
HYDIN	0	genome.wustl.edu	37	16	70917863	70917863	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	70917863	70917863	G	A	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	silent	c.9939	p.A3313	0.013	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				71	0	0	27	56	67.4699
PHLPP2	0	genome.wustl.edu	37	16	71683255	71683255	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	71683255	71683255	G	C	SNP	PHLPP2	ENST00000356272	human	ensembl	74_37	-1	known	missense	c.3510	p.D1170E	0.994	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom	-	no_errors	PHLPP2	HGNC	ENSG00000040199				82	0	0	114	10	8.06452
ADAD2	0	genome.wustl.edu	37	16	84228102	84228102	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	16	84228102	84228102	C	T	SNP	ADAD2	ENST00000268624	human	ensembl	74_37	+1	known	missense	c.689	p.A230V	0.000	pfam_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD2	HGNC	ENSG00000140955				29	0	0	35	3	7.89474
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106				106	1	0.934579	104	9	7.9646
KCNJ12	0	genome.wustl.edu	37	17	21319222	21319222	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	21319222	21319222	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.568	p.R190W	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185				123	0	0	101	18	15.1261
ETV4	0	genome.wustl.edu	37	17	41606053	41606053	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	41606053	41606053	A	G	SNP	ETV4	ENST00000319349	human	ensembl	74_37	-1	known	missense	c.1289	p.L430S	1.000	NULL	pfam_ETS_PEA3_N,pfam_Ets_dom,smart_Ets_dom,prints_Ets_dom,pfscan_Ets_dom	-	no_errors	ETV4	HGNC	ENSG00000175832				87	0	0	49	22	30.9859
LRRC37A2	0	genome.wustl.edu	37	17	44590246	44590246	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	44590246	44590246	G	A	SNP	LRRC37A2	ENST00000333412	human	ensembl	74_37	+1	known	silent	c.168	p.P56	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A2	HGNC	ENSG00000238083				253	0	0	195	66	25.2874
RAD51C	0	genome.wustl.edu	37	17	56772408	56772408	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	56772408	56772408	C	T	SNP	RAD51C	ENST00000337432	human	ensembl	74_37	+1	known	silent	c.262	p.L88	0.996	pfam_DNA_recomb/repair_Rad51_C,pirsf_DNA_recomb/repair_RecA-like	pfam_DNA_recomb/repair_Rad51_C,pfam_Circ_KaiC/RadA,superfamily_P-loop_NTPase,superfamily_DNA_repair_Rad51/TF_NusA_a-hlx,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	RAD51C	HGNC	ENSG00000108384				98	0	0	69	39	36.1111
DNAI2	0	genome.wustl.edu	37	17	72308268	72308268	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	72308268	72308268	C	G	SNP	DNAI2	ENST00000311014	human	ensembl	74_37	+1	known	missense	c.1621	p.L541V	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI2	HGNC	ENSG00000171595				31	0	0	33	11	25
SMCHD1	0	genome.wustl.edu	37	18	2732472	2732472	+	Silent	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	2732472	2732472	T	G	SNP	SMCHD1	ENST00000320876	human	ensembl	74_37	+1	known	silent	c.3258	p.A1086	0.852	NULL	pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_HATPase_ATP-bd,smart_SMC_hinge	-	no_errors	SMCHD1	HGNC	ENSG00000101596				26	0	0	14	9	39.1304
EMILIN2	0	genome.wustl.edu	37	18	2890589	2890589	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	2890589	2890589	G	T	SNP	EMILIN2	ENST00000254528	human	ensembl	74_37	+1	known	missense	c.464	p.R155M	0.988	NULL	pfam_EMI_domain,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	EMILIN2	HGNC	ENSG00000132205				86	0	0	50	54	51.9231
CCDC178	0	genome.wustl.edu	37	18	30950133	30950133	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	30950133	30950133	A	C	SNP	CCDC178	ENST00000406524	human	ensembl	74_37	-1	known	missense	c.229	p.F77V	0.962	NULL	NULL	-	no_errors	CCDC178	HGNC	ENSG00000166960				49	0	0	11	18	62.069
SYT4	0	genome.wustl.edu	37	18	40850383	40850383	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	40850383	40850383	C	A	SNP	SYT4	ENST00000255224	human	ensembl	74_37	-1	known	missense	c.1201	p.G401C	0.958	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT4	HGNC	ENSG00000132872				236	0	0	179	22	10.9453
L3MBTL4	0	genome.wustl.edu	37	18	6244515	6244515	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	6244515	6244515	G	A	SNP	L3MBTL4	ENST00000284898	human	ensembl	74_37	-1	known	missense	c.292	p.P98S	1.000	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_SAM_type1,pfam_Znf_C2HC,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL4	HGNC	ENSG00000154655				164	0	0	187	37	16.5179
ABCA7	0	genome.wustl.edu	37	19	1047344	1047344	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	1047344	1047344	G	A	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	silent	c.2034	p.R678	0.994	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687				31	0	0	18	12	40
SMARCA4	0	genome.wustl.edu	37	19	11141427	11141427	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	11141427	11141427	G	A	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3404	p.R1135Q	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				15	0	0	16	6	27.2727
ZNF442	0	genome.wustl.edu	37	19	12461806	12461806	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	12461806	12461806	C	T	SNP	ZNF442	ENST00000242804	human	ensembl	74_37	-1	known	missense	c.593	p.R198K	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF442	HGNC	ENSG00000198342				168	0	0	120	57	32.2034
CD97	0	genome.wustl.edu	37	19	14507981	14507981	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	14507981	14507981	G	A	SNP	CD97	ENST00000242786	human	ensembl	74_37	+1	known	missense	c.571	p.G191S	0.966	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_CD97,prints_GPCR_2_secretin-like,prints_GPCR_2_EMR1_rcpt	-	no_errors	CD97	HGNC	ENSG00000123146				187	0	0	121	60	33.1492
CPAMD8	0	genome.wustl.edu	37	19	17025610	17025610	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	17025610	17025610	C	G	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.3784	p.V1262L	1.000	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111				47	0	0	40	26	39.3939
ZNF208	0	genome.wustl.edu	37	19	22157258	22157258	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	22157258	22157258	C	G	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	missense	c.578	p.R193T	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321				88	0	0	48	36	42.8571
ZNF676	0	genome.wustl.edu	37	19	22364124	22364124	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	22364124	22364124	T	G	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.395	p.K132T	0.007	NULL	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				167	0	0	68	73	51.773
ZNF585A	0	genome.wustl.edu	37	19	37642910	37642910	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	37642910	37642910	C	T	SNP	ZNF585A	ENST00000356958	human	ensembl	74_37	-1	known	missense	c.1891	p.E631K	0.972	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585A	HGNC	ENSG00000196967				58	0	0	56	5	8.19672
ZNF780B	0	genome.wustl.edu	37	19	40542132	40542132	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	40542132	40542132	G	A	SNP	ZNF780B	ENST00000434248	human	ensembl	74_37	-1	known	nonsense	c.634	p.Q212*	0.891	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF780B	HGNC	ENSG00000128000				88	0	0	23	66	74.1573
CHAF1A	0	genome.wustl.edu	37	19	4432024	4432024	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	4432024	4432024	G	A	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.2023	p.G675R	1.000	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670				143	0	0	79	52	39.6947
FUT1	0	genome.wustl.edu	37	19	49253837	49253837	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	49253837	49253837	A	G	SNP	FUT1	ENST00000310160	human	ensembl	74_37	-1	known	silent	c.702	p.G234	0.128	pfam_Glyco_trans_11	pfam_Glyco_trans_11	-	no_errors	FUT1	HGNC	ENSG00000174951				197	0	0	144	83	36.5639
ZNF135	0	genome.wustl.edu	37	19	58574826	58574826	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	58574826	58574826	C	T	SNP	ZNF135	ENST00000401053	human	ensembl	74_37	+1	known	missense	c.209	p.P70L	0.000	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF135	HGNC	ENSG00000176293				81	0	0	51	25	32.8947
A1BG	0	genome.wustl.edu	37	19	58862850	58862850	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	19	58862850	58862850	C	T	SNP	A1BG	ENST00000263100	human	ensembl	74_37	-1	known	missense	c.817	p.D273N	0.003	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	A1BG	HGNC	ENSG00000121410				101	0	0	122	88	41.9048
FIGN	0	genome.wustl.edu	37	2	164468121	164468121	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	164468121	164468121	T	G	SNP	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	missense	c.221	p.K74T	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263				188	0	0	184	81	30.566
CCDC173	0	genome.wustl.edu	37	2	170531264	170531264	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	170531264	170531264	T	G	SNP	CCDC173	ENST00000447353	human	ensembl	74_37	-1	known	missense	c.484	p.S162R	1.000	NULL	NULL	-	no_errors	CCDC173	HGNC	ENSG00000154479				23	0	0	16	14	46.6667
TTN	0	genome.wustl.edu	37	2	179406037	179406037	+	Silent	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	179406037	179406037	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.90063	p.S30021	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				10	0	0	11	4	26.6667
TTN	0	genome.wustl.edu	37	2	179427899	179427899	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	179427899	179427899	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.75256	p.V25086I	0.956	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				252	0	0	159	167	51.227
TTN	0	genome.wustl.edu	37	2	179606168	179606168	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	179606168	179606168	T	C	SNP	TTN	ENST00000342175	human	ensembl	74_37	-1	known	missense	c.11279	p.K3760R	0.925	superfamily_RNaseH-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				226	0	0	142	166	53.8961
AOX1	0	genome.wustl.edu	37	2	201468739	201468739	+	Splice_Site	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	201468739	201468739	G	A	SNP	AOX1	ENST00000374700	human	ensembl	74_37	+1	known	splice_site	c.589-1	e8-1	0.990	-	-	-	no_errors	AOX1	HGNC	ENSG00000138356				57	0	0	72	28	28
MDH1B	0	genome.wustl.edu	37	2	207620043	207620043	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	207620043	207620043	C	T	SNP	MDH1B	ENST00000374412	human	ensembl	74_37	-1	known	silent	c.600	p.K200	0.000	NULL	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C	-	no_errors	MDH1B	HGNC	ENSG00000138400				65	0	0	68	35	33.9806
MAP2	0	genome.wustl.edu	37	2	210517907	210517907	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	210517907	210517907	C	A	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	silent	c.13	p.R5	1.000	NULL	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018				44	0	0	21	22	51.1628
KIF1A	0	genome.wustl.edu	37	2	241710439	241710439	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	241710439	241710439	G	A	SNP	KIF1A	ENST00000498729	human	ensembl	74_37	-1	known	silent	c.1290	p.H430	0.997	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294				70	0	0	15	23	60.5263
MFSD2B	0	genome.wustl.edu	37	2	24236170	24236170	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	24236170	24236170	C	T	SNP	MFSD2B	ENST00000338315	human	ensembl	74_37	+1	known	missense	c.112	p.R38C	0.972	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD2B	HGNC	ENSG00000205639				34	0	0	6	16	72.7273
XDH	0	genome.wustl.edu	37	2	31604589	31604589	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	31604589	31604589	C	T	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	missense	c.1042	p.V348I	0.994	pfam_Mopterin_DH_FAD-bd,superfamily_FAD-bd_2,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Xanthine_DH_ssu	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125				38	0	0	6	15	71.4286
CCT7	0	genome.wustl.edu	37	2	73477515	73477515	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	73477515	73477515	G	A	SNP	CCT7	ENST00000258091	human	ensembl	74_37	+1	known	silent	c.1152	p.E384	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,prints_Chaperone_TCP-1,tigrfam_Chap_CCT_eta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_eta	-	no_errors	CCT7	HGNC	ENSG00000135624				182	0	0	104	52	33.3333
LRRTM4	0	genome.wustl.edu	37	2	77746764	77746764	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	77746764	77746764	T	G	SNP	LRRTM4	ENST00000409911	human	ensembl	74_37	-1	known	missense	c.234	p.K78N	0.903	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM4	HGNC	ENSG00000176204				129	0	0	80	47	37.0079
REG1B	0	genome.wustl.edu	37	2	79312711	79312711	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	79312711	79312711	T	G	SNP	REG1B	ENST00000305089	human	ensembl	74_37	-1	known	missense	c.340	p.S114R	0.283	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG1B	HGNC	ENSG00000172023				84	0	0	37	26	41.2698
LRRTM1	0	genome.wustl.edu	37	2	80530700	80530700	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	80530700	80530700	G	T	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	missense	c.245	p.A82D	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951				137	0	0	86	50	36.7647
USP39	0	genome.wustl.edu	37	2	85843575	85843575	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	2	85843575	85843575	G	A	SNP	USP39	ENST00000409470	human	ensembl	74_37	+1	known	missense	c.257	p.R86Q	1.000	NULL	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP39	HGNC	ENSG00000168883				23	0	0	10	17	62.963
NKX2-2	0	genome.wustl.edu	37	20	21492735	21492735	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	21492735	21492735	G	A	SNP	NKX2-2	ENST00000377142	human	ensembl	74_37	-1	known	silent	c.648	p.H216	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-2	HGNC	ENSG00000125820				56	0	0	60	39	39.3939
TGM3	0	genome.wustl.edu	37	20	2298127	2298127	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	2298127	2298127	G	A	SNP	TGM3	ENST00000381458	human	ensembl	74_37	+1	known	missense	c.979	p.V327I	0.001	pfam_Transglutaminase-like,smart_Transglutaminase-like	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM3	HGNC	ENSG00000125780				200	0	0	132	96	42.1053
MYLK2	0	genome.wustl.edu	37	20	30414687	30414687	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	30414687	30414687	C	T	SNP	MYLK2	ENST00000375985	human	ensembl	74_37	+1	known	silent	c.1170	p.I390	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MYLK2	HGNC	ENSG00000101306				64	0	0	35	44	55.6962
RPRD1B	0	genome.wustl.edu	37	20	36668908	36668908	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	36668908	36668908	C	T	SNP	RPRD1B	ENST00000373433	human	ensembl	74_37	+1	known	missense	c.223	p.P75S	1.000	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_CID_dom	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_CID_dom	-	no_errors	RPRD1B	HGNC	ENSG00000101413				122	0	0	101	63	38.4146
SLC32A1	0	genome.wustl.edu	37	20	37353700	37353700	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	37353700	37353700	C	T	SNP	SLC32A1	ENST00000217420	human	ensembl	74_37	+1	known	silent	c.333	p.H111	0.791	NULL	pfam_AA_transpt_TM	-	no_errors	SLC32A1	HGNC	ENSG00000101438				123	0	0	80	44	35.4839
L3MBTL1	0	genome.wustl.edu	37	20	42165076	42165076	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	42165076	42165076	G	A	SNP	L3MBTL1	ENST00000418998	human	ensembl	74_37	+1	known	silent	c.2085	p.K695	1.000	NULL	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513				129	0	0	117	47	28.6585
FITM2	0	genome.wustl.edu	37	20	42935516	42935516	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	42935516	42935516	G	A	SNP	FITM2	ENST00000396825	human	ensembl	74_37	-1	known	nonsense	c.538	p.R180*	0.010	pfam_FIT	pfam_FIT	-	no_errors	FITM2	HGNC	ENSG00000197296				78	0	0	42	34	44.7368
ADNP	0	genome.wustl.edu	37	20	49508238	49508238	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	49508238	49508238	C	A	SNP	ADNP	ENST00000349014	human	ensembl	74_37	-1	known	missense	c.3013	p.D1005Y	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ADNP	HGNC	ENSG00000101126				136	0	0	96	60	38.4615
MC3R	0	genome.wustl.edu	37	20	54824819	54824819	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	20	54824819	54824819	G	A	SNP	MC3R	ENST00000243911	human	ensembl	74_37	+1	known	missense	c.920	p.R307H	1.000	pfam_7TM_GPCR_olfarory/Srsx,prints_Melcrt_ACTH_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melcrt_ACTH_rcpt,prints_Mcort_3_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC3R	HGNC	ENSG00000124089				207	0	0	127	86	40.3756
PCNT	0	genome.wustl.edu	37	21	47860931	47860931	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	21	47860931	47860931	G	A	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	missense	c.9557	p.R3186Q	0.890	pfam_PACT_domain	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299				109	1	0.909091	75	6	7.40741
PHF21B	0	genome.wustl.edu	37	22	45312223	45312223	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	22	45312223	45312223	G	A	SNP	PHF21B	ENST00000313237	human	ensembl	74_37	-1	known	silent	c.501	p.T167	0.939	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21B	HGNC	ENSG00000056487				34	0	0	21	8	27.5862
PLXNB2	0	genome.wustl.edu	37	22	50722306	50722306	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	22	50722306	50722306	G	A	SNP	PLXNB2	ENST00000359337	human	ensembl	74_37	-1	known	silent	c.2377	p.L793	0.999	superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB2	HGNC	ENSG00000196576				28	0	0	12	5	29.4118
CD47	0	genome.wustl.edu	37	3	107798992	107798992	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	107798992	107798992	A	G	SNP	CD47	ENST00000361309	human	ensembl	74_37	-1	known	silent	c.246	p.S82	0.000	pfam_CD47_Vset,pfscan_Ig-like_dom	pfam_CD47_Vset,pfam_CD47_TM,pfscan_Ig-like_dom	-	no_errors	CD47	HGNC	ENSG00000196776				166	1	0.598802	88	68	43.5897
EPHB1	0	genome.wustl.edu	37	3	134873017	134873017	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	134873017	134873017	C	T	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.1321	p.H441Y	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928				259	0	0	138	84	37.8378
TP63	0	genome.wustl.edu	37	3	189526314	189526314	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	189526314	189526314	C	T	SNP	TP63	ENST00000264731	human	ensembl	74_37	+1	known	missense	c.578	p.T193M	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_SAM_2,superfamily_p53-like_TF_DNA-bd,superfamily_SAM/pointed,superfamily_p53_tetrameristn,smart_SAM,prints_p53_tumour_suppressor	-	no_errors	TP63	HGNC	ENSG00000073282				106	0	0	112	28	20
SCN10A	0	genome.wustl.edu	37	3	38739984	38739984	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	38739984	38739984	C	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.4727	p.R1576H	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				144	0	0	102	7	6.42202
ACKR2	0	genome.wustl.edu	37	3	42906640	42906640	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	42906640	42906640	C	A	SNP	ACKR2	ENST00000273145	human	ensembl	74_37	+1	known	missense	c.646	p.L216I	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_ATII_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_ATII_rcpt,prints_Chemokine_CXCR4	-	no_errors	ACKR2	HGNC	ENSG00000144648				222	0	0	133	78	36.9668
PTH1R	0	genome.wustl.edu	37	3	46940163	46940163	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	46940163	46940163	G	A	SNP	PTH1R	ENST00000313049	human	ensembl	74_37	+1	known	missense	c.650	p.C217Y	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_parathyroid_rcpt	-	no_errors	PTH1R	HGNC	ENSG00000160801				83	0	0	48	10	17.2414
SETD2	0	genome.wustl.edu	37	3	47087998	47087998	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	47087998	47087998	C	A	SNP	SETD2	ENST00000409792	human	ensembl	74_37	-1	known	silent	c.7077	p.G2359	0.956	NULL	pfam_SRI,pfam_SET_dom,pfam_WW_dom,superfamily_WW_dom,superfamily_Ferritin-like_SF,smart_AWS,smart_SET_dom,smart_Post-SET_dom,smart_WW_dom,pfscan_AWS,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_WW_dom	-	no_errors	SETD2	HGNC	ENSG00000181555				71	0	0	41	32	43.8356
USP19	0	genome.wustl.edu	37	3	49153507	49153507	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	49153507	49153507	C	T	SNP	USP19	ENST00000398888	human	ensembl	74_37	-1	known	missense	c.1141	p.G381R	1.000	superfamily_HSP20-like_chaperone,pfscan_CS_dom	pfam_Peptidase_C19/C67,pfam_Znf_MYND,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom,pfscan_Znf_MYND,pfscan_Peptidase_C19/C67	-	no_errors	USP19	HGNC	ENSG00000172046				75	0	0	52	5	8.77193
LAMB2	0	genome.wustl.edu	37	3	49161697	49161697	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	49161697	49161697	C	T	SNP	LAMB2	ENST00000305544	human	ensembl	74_37	-1	known	missense	c.3350	p.R1117H	0.029	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037				84	0	0	38	20	34.4828
SFMBT1	0	genome.wustl.edu	37	3	52941197	52941197	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	52941197	52941197	G	A	SNP	SFMBT1	ENST00000358080	human	ensembl	74_37	-1	known	missense	c.2219	p.S740F	0.992	NULL	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT1	HGNC	ENSG00000163935				120	1	0.826446	124	16	11.4286
FLNB	0	genome.wustl.edu	37	3	58111472	58111472	+	Splice_Site	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	58111472	58111472	T	C	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	splice_site	c.4061+2	e23+2	1.000	-	-	-	no_errors	FLNB	HGNC	ENSG00000136068				127	0	0	120	9	6.97674
EPHA3	0	genome.wustl.edu	37	3	89259055	89259055	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	3	89259055	89259055	A	G	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	missense	c.199	p.T67A	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524				50	0	0	31	12	27.907
FGA	0	genome.wustl.edu	37	4	155510669	155510669	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	155510669	155510669	C	T	SNP	FGA	ENST00000302053	human	ensembl	74_37	-1	known	missense	c.100	p.V34M	0.004	NULL	pfam_Fibrinogen_a/b/g_C_dom,pfam_Fibrinogen_a/b/g_coil_dom,pfam_Fibrinogen_aC,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGA	HGNC	ENSG00000171560				141	0	0	92	6	6.12245
WHSC1	0	genome.wustl.edu	37	4	1980601	1980601	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	1980601	1980601	C	T	SNP	WHSC1	ENST00000382891	human	ensembl	74_37	+1	known	missense	c.4063	p.R1355W	0.005	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_box_dom,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_PWWP_dom,smart_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_box_dom	-	no_errors	WHSC1	HGNC	ENSG00000109685				20	0	0	22	16	42.1053
WDR19	0	genome.wustl.edu	37	4	39269634	39269634	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	39269634	39269634	G	A	SNP	WDR19	ENST00000399820	human	ensembl	74_37	+1	known	missense	c.3281	p.R1094H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR19	HGNC	ENSG00000157796				24	0	0	4	5	55.5556
WDFY3	0	genome.wustl.edu	37	4	85638087	85638087	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	85638087	85638087	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.7837	p.D2613N	1.000	NULL	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625				158	0	0	133	117	46.8
IBSP	0	genome.wustl.edu	37	4	88732877	88732877	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	88732877	88732877	G	A	SNP	IBSP	ENST00000226284	human	ensembl	74_37	+1	known	missense	c.769	p.V257I	0.000	pfam_BSP_II	pfam_BSP_II	-	no_errors	IBSP	HGNC	ENSG00000029559				56	0	0	29	58	66.6667
HERC6	0	genome.wustl.edu	37	4	89304411	89304411	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	4	89304411	89304411	G	A	SNP	HERC6	ENST00000264346	human	ensembl	74_37	+1	known	missense	c.238	p.V80M	0.948	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC6	HGNC	ENSG00000138642				13	0	0	21	9	30
SLCO4C1	0	genome.wustl.edu	37	5	101592894	101592894	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	101592894	101592894	A	C	SNP	SLCO4C1	ENST00000310954	human	ensembl	74_37	-1	known	missense	c.1394	p.L465R	0.027	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO4C1	HGNC	ENSG00000173930				81	0	0	124	17	12.0567
KCNN2	0	genome.wustl.edu	37	5	113698764	113698764	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	113698764	113698764	G	A	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	missense	c.292	p.G98R	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709				19	0	0	20	9	31.0345
PCDHGA4	0	genome.wustl.edu	37	5	140734952	140734952	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	140734952	140734952	G	A	SNP	PCDHGA4	ENST00000571252	human	ensembl	74_37	+1	known	missense	c.185	p.R62H	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA4	HGNC	ENSG00000262576				160	0	0	93	26	21.8487
CD74	0	genome.wustl.edu	37	5	149786487	149786487	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	149786487	149786487	G	A	SNP	CD74	ENST00000009530	human	ensembl	74_37	-1	known	missense	c.335	p.P112L	0.553	pfam_MHC_II-assoc_invar/CLIP_MHC-bd,pirsf_MHC_II-assoc_invar_chain,prints_MHC_II-assoc_invar_chain	pfam_MHC_II-assoc_invar/CLIP_MHC-bd,pfam_MHC_II-assoc_invariant_trimer,pfam_Thyroglobulin_1,superfamily_MHC_II-assoc_invariant_trimer,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_MHC_II-assoc_invar_chain,pfscan_Thyroglobulin_1,prints_MHC_II-assoc_invar_chain	-	no_errors	CD74	HGNC	ENSG00000019582				12	0	0	7	8	53.3333
FAT2	0	genome.wustl.edu	37	5	150889712	150889712	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	150889712	150889712	G	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	nonsense	c.11929	p.Q3977*	0.001	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570				187	0	0	81	30	27.027
FAT2	0	genome.wustl.edu	37	5	150924479	150924479	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	150924479	150924479	A	T	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.6209	p.F2070Y	0.987	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570				110	0	0	65	44	40.367
GLRA1	0	genome.wustl.edu	37	5	151202370	151202370	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	151202370	151202370	C	T	SNP	GLRA1	ENST00000455880	human	ensembl	74_37	-1	known	missense	c.1238	p.R413Q	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_Glycine_rcpt_A,prints_Glycine_rcpt_A1,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRA1	HGNC	ENSG00000145888				143	0	0	52	22	29.7297
GABRA1	0	genome.wustl.edu	37	5	161324161	161324161	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	161324161	161324161	C	A	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	nonsense	c.1104	p.Y368*	0.994	superfamily_Neurotrans-gated_channel_TM,prints_GABBAa1_rcpt	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355				182	1	0.546448	90	38	29.6875
PDLIM7	0	genome.wustl.edu	37	5	176911090	176911090	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	176911090	176911090	G	A	SNP	PDLIM7	ENST00000355841	human	ensembl	74_37	-1	known	silent	c.1152	p.G384	0.954	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM7	HGNC	ENSG00000196923				89	0	0	51	17	25
TRIM41	0	genome.wustl.edu	37	5	180661326	180661326	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	180661326	180661326	C	T	SNP	TRIM41	ENST00000315073	human	ensembl	74_37	+1	known	missense	c.1444	p.R482C	1.000	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,pfam_DUF3631,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM41	HGNC	ENSG00000146063				43	0	0	25	11	30.5556
CDH12	0	genome.wustl.edu	37	5	21755708	21755708	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	21755708	21755708	A	T	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	missense	c.1877	p.I626K	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162				53	0	0	37	5	11.9048
CDH12	0	genome.wustl.edu	37	5	21755928	21755928	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	21755928	21755928	G	A	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	nonsense	c.1657	p.R553*	0.986	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162				101	0	0	19	95	83.3333
CDH12	0	genome.wustl.edu	37	5	21817188	21817188	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	21817188	21817188	T	C	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	missense	c.868	p.R290G	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162				114	1	0.869565	30	105	77.7778
AHRR	0	genome.wustl.edu	37	5	353860	353860	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	5	353860	353860	G	A	SNP	AHRR	ENST00000316418	human	ensembl	74_37	+1	known	silent	c.90	p.G30	0.016	pfscan_bHLH_dom	pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	AHRR	HGNC	ENSG00000063438				68	0	0	59	5	7.8125
PDE7B	0	genome.wustl.edu	37	6	136512828	136512828	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	136512828	136512828	C	A	SNP	PDE7B	ENST00000308191	human	ensembl	74_37	+1	known	missense	c.1203	p.N401K	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE7B	HGNC	ENSG00000171408				43	0	0	25	10	28.5714
GRM1	0	genome.wustl.edu	37	6	146351069	146351069	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	146351069	146351069	G	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.416	p.R139Q	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3_mtglu_rcpt_5	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				124	0	0	55	52	48.5981
GRM1	0	genome.wustl.edu	37	6	146720814	146720814	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	146720814	146720814	A	C	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.2639	p.K880T	1.000	prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3_mtglu_rcpt_5	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				48	0	0	26	13	33.3333
HMGCLL1	0	genome.wustl.edu	37	6	55443799	55443799	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	55443799	55443799	G	A	SNP	HMGCLL1	ENST00000398661	human	ensembl	74_37	-1	known	missense	c.55	p.R19W	1.000	NULL	pfam_PYR_CT,pfscan_PYR_CT	-	no_errors	HMGCLL1	HGNC	ENSG00000146151				37	0	0	33	28	45.9016
POU3F2	0	genome.wustl.edu	37	6	99282855	99282855	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	6	99282855	99282855	G	A	SNP	POU3F2	ENST00000328345	human	ensembl	74_37	+1	known	missense	c.106	p.E36K	1.000	pirsf_Transcription_factor_POU	pirsf_Transcription_factor_POU,pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F2	HGNC	ENSG00000184486				41	0	0	35	25	41.6667
DOCK4	0	genome.wustl.edu	37	7	111377017	111377017	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	111377017	111377017	C	T	SNP	DOCK4	ENST00000428084	human	ensembl	74_37	-1	known	missense	c.5261	p.G1754E	0.714	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK4	HGNC	ENSG00000128512				16	0	0	9	5	35.7143
C7orf33	0	genome.wustl.edu	37	7	148288045	148288045	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	148288045	148288045	C	T	SNP	C7orf33	ENST00000307003	human	ensembl	74_37	+1	known	missense	c.28	p.L10F	0.003	NULL	NULL	-	no_errors	C7orf33	HGNC	ENSG00000170279				79	0	0	44	14	24.1379
WIPF3	0	genome.wustl.edu	37	7	29929023	29929023	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	29929023	29929023	A	C	SNP	WIPF3	ENST00000242140	human	ensembl	74_37	+1	known	missense	c.1351	p.S451R	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WIPF3	HGNC	ENSG00000122574				37	0	0	27	16	37.2093
IKZF1	0	genome.wustl.edu	37	7	50468308	50468308	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	50468308	50468308	C	T	SNP	IKZF1	ENST00000331340	human	ensembl	74_37	+1	known	missense	c.1543	p.R515C	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF1	HGNC	ENSG00000185811				36	0	0	19	20	51.2821
ZNF92	0	genome.wustl.edu	37	7	64863276	64863276	+	Silent	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	64863276	64863276	A	G	SNP	ZNF92	ENST00000328747	human	ensembl	74_37	+1	known	silent	c.249	p.Q83	0.007	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF92	HGNC	ENSG00000146757				72	0	0	37	25	40.3226
RIMS2	0	genome.wustl.edu	37	8	104924394	104924394	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	104924394	104924394	C	A	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	silent	c.1806	p.G602	0.786	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406				112	0	0	61	60	49.5868
KCNQ3	0	genome.wustl.edu	37	8	133175738	133175738	+	Silent	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	133175738	133175738	T	C	SNP	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	silent	c.1239	p.K413	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156				76	0	0	51	39	43.3333
TG	0	genome.wustl.edu	37	8	134024163	134024163	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	134024163	134024163	C	A	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.6280	p.Q2094K	1.000	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832				539	1	0.185185	334	243	42.1144
PPP1R16A	0	genome.wustl.edu	37	8	145722583	145722583	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	145722583	145722583	C	T	SNP	PPP1R16A	ENST00000292539	human	ensembl	74_37	+1	known	silent	c.6	p.A2	1.000	pirsf_Pase-1_reg_su_16AB_euk	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R16A	HGNC	ENSG00000160972				8	0	0	12	8	40
CSMD1	0	genome.wustl.edu	37	8	2800106	2800106	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	2800106	2800106	C	A	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.10426	p.D3476Y	0.994	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				14	0	0	7	8	53.3333
C8orf34	0	genome.wustl.edu	37	8	69552617	69552617	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	8	69552617	69552617	T	C	SNP	C8orf34	ENST00000518698	human	ensembl	74_37	+1	known	missense	c.1112	p.L371P	1.000	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C8orf34	HGNC	ENSG00000165084				67	0	0	42	30	41.6667
MSANTD3	0	genome.wustl.edu	37	9	103204414	103204414	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	103204414	103204414	G	A	SNP	MSANTD3	ENST00000395067	human	ensembl	74_37	+1	known	missense	c.194	p.R65Q	1.000	NULL	NULL	-	no_errors	MSANTD3	HGNC	ENSG00000066697				60	0	0	33	26	44.0678
PALM2	0	genome.wustl.edu	37	9	112705558	112705558	+	Silent	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	112705558	112705558	C	T	SNP	PALM2	ENST00000448454	human	ensembl	74_37	+1	known	silent	c.1095	p.D365	0.901	pfam_Paralemmin	pfam_Paralemmin	-	no_errors	PALM2	HGNC	ENSG00000243444				153	0	0	94	53	36.0544
EXD3	0	genome.wustl.edu	37	9	140242607	140242607	+	Silent	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	140242607	140242607	C	A	SNP	EXD3	ENST00000340951	human	ensembl	74_37	-1	known	silent	c.1914	p.L638	1.000	pfam_Mut7-C_RNAse_dom	pfam_Mut7-C_RNAse_dom,pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD3	HGNC	ENSG00000187609				26	0	0	19	8	29.6296
RNA5SP283	0	genome.wustl.edu	37	9	66458183	66458183	+	RNA	SNP	A	A	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	66458183	66458183	A	G	SNP	RNA5SP283	ENST00000365604	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	RNA5SP283	HGNC	ENSG00000202474				13	0	0	12	4	25
LOC100996870	0	genome.wustl.edu	37	9	66466418	66466418	+	RNA	SNP	C	C	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	66466418	66466418	C	T	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				10	0	0	15	3	16.6667
LOC100996870	0	genome.wustl.edu	37	9	66468984	66468984	+	RNA	SNP	A	A	C			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	66468984	66468984	A	C	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.040	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				11	0	0	11	5	31.25
TRPM3	0	genome.wustl.edu	37	9	73442845	73442845	+	Silent	SNP	G	G	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	9	73442845	73442845	G	A	SNP	TRPM3	ENST00000423814	human	ensembl	74_37	-1	known	silent	c.897	p.N299	0.978	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067				191	0	0	111	54	32.7273
TGIF2LY	0	genome.wustl.edu	37	Y	3447740	3447740	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	Y	3447740	3447740	C	A	SNP	TGIF2LY	ENST00000321217	human	ensembl	74_37	+1	known	missense	c.455	p.T152K	0.035	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TGIF2LY	HGNC	ENSG00000176679				49	0	0	12	41	77.3585
PLEKHA6	0	genome.wustl.edu	37	1	204199652	204199653	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	204199652	204199653	-	T	INS	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	frame_shift_ins	c.2472_2471	p.I825fs	1.000:1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850				22	0	0	19	9	32.1429
FGGY	0	genome.wustl.edu	37	1	59812016	59812017	+	Frame_Shift_Ins	INS	-	-	G			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	1	59812016	59812017	-	G	INS	FGGY	ENST00000303721	human	ensembl	74_37	+1	known	frame_shift_ins	c.411_412	p.V139fs	0.394:0.997	pfam_Carb_kinase_FGGY_N,tigrfam_Carb_kinase_FGGY-rel	pfam_Carb_kinase_FGGY_C,pfam_Carb_kinase_FGGY_N,tigrfam_Carb_kinase_FGGY-rel	-	no_errors	FGGY	HGNC	ENSG00000172456				75	0	0	67	21	23.8636
MMP12	0	genome.wustl.edu	37	11	102738793	102738794	+	RNA	INS	-	-	T			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	11	102738793	102738794	-	T	INS	MMP12	ENST00000326227	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.975:1.000	-	-	-	no_errors	MMP12	HGNC	ENSG00000110347				8	0	0	23	4	14.8148
EEF1DP3	0	genome.wustl.edu	37	13	32527507	32527508	+	RNA	DEL	GT	GT	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	13	32527507	32527508	GT	-	DEL	EEF1DP3	ENST00000428783	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006:0.035	-	-	-	no_errors	EEF1DP3	HGNC	ENSG00000229715				82	0	0	85	5	5.55556
TP53	0	genome.wustl.edu	37	17	7578470	7578482	+	Frame_Shift_Del	DEL	CGGGCGGGGGTGT	CGGGCGGGGGTGT	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	CGGGCGGGGGTGT	CGGGCGGGGGTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	17	7578470	7578482	CGGGCGGGGGTGT	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	frame_shift_del	c.460_448	p.T150fs	0.872:0.000:0.000:0.000:0.000:1.000:1.000:0.921:0.999:0.999:0.001:0.002:0.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				89	0	0	26	41	61.194
SEH1L	0	genome.wustl.edu	37	18	12986927	12986929	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	18	12986927	12986929	TCC	-	DEL	SEH1L	ENST00000399892	human	ensembl	74_37	+1	known	in_frame_del	c.1137_1139	p.P383in_frame_del	0.997:1.000:1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SEH1L	HGNC	ENSG00000085415				70	0	0	85	6	6.59341
LAT2	0	genome.wustl.edu	37	7	73635050	73635052	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-IN-A6RR-01A-12D-A32N-08	TCGA-IN-A6RR-10A-01D-A32N-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	030186a3-4c51-4835-bc8f-2301b10aa0ad	6019dd4f-63a8-4fe0-82c4-f77a19d397a7	7	73635050	73635052	GGA	-	DEL	LAT2	ENST00000275635	human	ensembl	74_37	+1	known	in_frame_del	c.318_320	p.E108in_frame_del	0.001:0.032:0.030	NULL	NULL	-	no_errors	LAT2	HGNC	ENSG00000086730				25	0	0	12	6	33.3333
