Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AKT3	0	genome.wustl.edu	37	1	243675669	243675669	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	243675669	243675669	T	G	SNP	AKT3	ENST00000263826	human	ensembl	74_37	-1	known	missense	c.1311	p.E437D	1.000	pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_AGC-kinase_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom	-	no_errors	AKT3	HGNC	ENSG00000117020	tier1	-	-	88	0	0.00	85	7	7.61
ALG11	0	genome.wustl.edu	37	13	52598172	52598172	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	13	52598172	52598172	C	T	SNP	ALG11	ENST00000521508	human	ensembl	74_37	+1	known	silent	c.306	p.T102	0.988	NULL	pfam_Glyco_trans_1	-	no_errors	ALG11	HGNC	ENSG00000253710	tier1	-	-	109	0	0.00	102	10	8.93
APOB	0	genome.wustl.edu	37	2	21245836	21245836	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	2	21245836	21245836	C	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.2683	p.A895T	0.999	pfam_Vitellinogen_open_b-sht,superfamily_Lipid_transp_b-sht_shell	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	62	0	0.00	67	7	9.46
ASXL3	0	genome.wustl.edu	37	18	31319532	31319532	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	18	31319532	31319532	T	G	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	missense	c.2164	p.L722V	1.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431	tier1	-	-	276	0	0.00	231	26	10.12
AVPR1A	0	genome.wustl.edu	37	12	63544162	63544162	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	12	63544162	63544162	G	A	SNP	AVPR1A	ENST00000299178	human	ensembl	74_37	-1	known	missense	c.455	p.A152V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_DUF1856,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_V1A_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	AVPR1A	HGNC	ENSG00000166148	tier1	-	-	60	0	0.00	25	7	21.21
BSN	0	genome.wustl.edu	37	3	49695569	49695569	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	3	49695569	49695569	C	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	silent	c.8580	p.A2860	0.997	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	tier1	-	-	62	0	0.00	35	5	12.50
BTN2A3P	0	genome.wustl.edu	37	6	26422353	26422353	+	RNA	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	6	26422353	26422353	C	T	SNP	BTN2A3P	ENST00000465856	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.055	-	-	-	no_errors	BTN2A3P	HGNC	ENSG00000124549				68	0	0.00	88	5	5.38
C4A	0	genome.wustl.edu	37	6	31963812	31963812	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	6	31963812	31963812	C	T	SNP	C4A	ENST00000428956	human	ensembl	74_37	+1	known	missense	c.3311	p.S1104F	0.161	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_A2M_N,pfam_Netrin_module_non-TIMP,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,superfamily_TIMP-like_OB-fold,superfamily_Anaphylatoxin_comp_syst,superfamily_Invasin/intimin_cell_adhesion,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain,prints_Anaphylatoxn_comp_syst_dom	-	no_errors	C4A	HGNC	ENSG00000244731	tier1	-	-	33	0	0.00	31	5	13.89
CCL13	0	genome.wustl.edu	37	17	32684539	32684539	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	17	32684539	32684539	A	C	SNP	CCL13	ENST00000225844	human	ensembl	74_37	+1	known	missense	c.122	p.K41T	0.002	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL13	HGNC	ENSG00000181374	tier1	-	-	140	0	0.00	135	24	15.09
CCT6A	0	genome.wustl.edu	37	7	56122109	56122109	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	7	56122109	56122109	C	T	SNP	CCT6A	ENST00000275603	human	ensembl	74_37	+1	known	silent	c.249	p.A83	0.996	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_zeta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_zeta	-	no_errors	CCT6A	HGNC	ENSG00000146731	tier1	-	-	174	0	0.00	170	38	18.27
CSMD3	0	genome.wustl.edu	37	8	113569048	113569048	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	8	113569048	113569048	A	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.4178	p.L1393P	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	60	0	0.00	58	6	9.38
CYP2C19	0	genome.wustl.edu	37	10	96612638	96612638	+	Silent	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	10	96612638	96612638	G	A	SNP	CYP2C19	ENST00000371321	human	ensembl	74_37	+1	known	silent	c.1440	p.P480	0.220	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2C19	HGNC	ENSG00000165841	tier1	rs28399514	-	132	0	0.00	100	7	6.54
DCAF4L1	0	genome.wustl.edu	37	4	41984321	41984321	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	4	41984321	41984321	T	C	SNP	DCAF4L1	ENST00000333141	human	ensembl	74_37	+1	known	missense	c.512	p.V171A	0.022	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L1	HGNC	ENSG00000182308	tier1	-	-	119	0	0.00	93	9	8.82
DCLRE1C	0	genome.wustl.edu	37	10	14976434	14976434	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	10	14976434	14976434	G	A	SNP	DCLRE1C	ENST00000378278	human	ensembl	74_37	-1	known	missense	c.623	p.A208V	1.000	NULL	pfam_DRMBL	-	no_errors	DCLRE1C	HGNC	ENSG00000152457	tier1	-	-	193	0	0.00	210	26	10.97
DDIT4L	0	genome.wustl.edu	37	4	101108874	101108874	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	4	101108874	101108874	A	G	SNP	DDIT4L	ENST00000273990	human	ensembl	74_37	-1	known	missense	c.542	p.L181P	1.000	pfam_RTP801-like	pfam_RTP801-like	-	no_errors	DDIT4L	HGNC	ENSG00000145358	tier1	-	-	66	0	0.00	73	11	13.10
DDX27	0	genome.wustl.edu	37	20	47846808	47846808	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	20	47846808	47846808	G	A	SNP	DDX27	ENST00000371764	human	ensembl	74_37	+1	known	missense	c.1046	p.R349Q	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX27	HGNC	ENSG00000124228	tier1	-	-	56	0	0.00	47	9	16.07
DDX58	0	genome.wustl.edu	37	9	32467893	32467893	+	Silent	SNP	T	T	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	9	32467893	32467893	T	A	SNP	DDX58	ENST00000379883	human	ensembl	74_37	-1	known	silent	c.2052	p.A684	0.975	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_RIG-I_C-RD,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_DEATH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX58	HGNC	ENSG00000107201	tier1	-	-	56	0	0.00	56	5	8.20
DPP10	0	genome.wustl.edu	37	2	116497452	116497452	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	2	116497452	116497452	C	G	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	missense	c.847	p.Q283E	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497	tier1	-	-	177	0	0.00	165	9	5.17
EFR3A	0	genome.wustl.edu	37	8	132980595	132980596	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	8	132980595	132980596	-	A	INS	EFR3A	ENST00000254624	human	ensembl	74_37	+1	known	frame_shift_ins	c.909_910	p.D305fs	0.999:1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	EFR3A	HGNC	ENSG00000132294	tier1			35	0	0.00	37	2	5.13
EHF	0	genome.wustl.edu	37	11	34670588	34670588	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	34670588	34670588	C	0	DEL	EHF	ENST00000257831	human	ensembl	74_37	+1	known	frame_shift_del	c.366	p.Q123fs	1.000	NULL	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	EHF	HGNC	ENSG00000135373				235	0	0.00	204	17	7.69
EMC1	0	genome.wustl.edu	37	1	19566335	19566335	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	19566335	19566335	T	C	SNP	EMC1	ENST00000477853	human	ensembl	74_37	-1	known	missense	c.931	p.S311G	0.999	NULL	pfam_DUF1620,superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	EMC1	HGNC	ENSG00000127463	tier1	-	-	70	0	0.00	61	9	12.86
FAM27L	0	genome.wustl.edu	37	17	21825473	21825473	+	RNA	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	17	21825473	21825473	C	T	SNP	FAM27L	ENST00000426869	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM27L	HGNC	ENSG00000178130	tier1	-	-	63	0	0.00	29	6	17.14
FANCC	0	genome.wustl.edu	37	9	97864003	97864003	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	9	97864003	97864003	G	A	SNP	FANCC	ENST00000289081	human	ensembl	74_37	-1	known	nonsense	c.1663	p.R555*	0.057	pfam_Fanconi,pirsf_Fanconi	pfam_Fanconi,pirsf_Fanconi,prints_Fanconi	-	no_errors	FANCC	HGNC	ENSG00000158169	tier1	-	-	39	0	0.00	40	4	9.09
FAT2	0	genome.wustl.edu	37	5	150901409	150901409	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	5	150901409	150901409	G	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.10745	p.A3582V	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	38	0	0.00	35	5	12.20
FAT4	0	genome.wustl.edu	37	4	126328146	126328146	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	4	126328146	126328146	C	T	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.5419	p.R1807C	0.997	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	160	0	0.00	130	15	10.34
FSCB	0	genome.wustl.edu	37	14	44975139	44975139	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	14	44975139	44975139	A	G	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.1052	p.L351P	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139	tier1	-	-	124	0	0.00	105	12	10.26
GABRA1	0	genome.wustl.edu	37	5	161324286	161324286	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	5	161324286	161324286	A	T	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	missense	c.1229	p.K410M	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	tier1	-	-	116	0	0.00	100	16	13.79
GRIA3	0	genome.wustl.edu	37	X	122551303	122551303	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	X	122551303	122551303	A	C	SNP	GRIA3	ENST00000264357	human	ensembl	74_37	+1	known	missense	c.1551	p.E517D	1.000	pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA3	HGNC	ENSG00000125675	tier1	-	-	296	0	0.00	255	16	5.90
HBD	0	genome.wustl.edu	37	11	5255609	5255609	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	5255609	5255609	C	A	SNP	HBD	ENST00000380299	human	ensembl	74_37	-1	known	missense	c.55	p.V19L	0.588	pfam_Globin,superfamily_Globin-like,pfscan_Globin	pfam_Globin,superfamily_Globin-like,prints_Haemoglobin_b,pfscan_Globin	-	no_errors	HBD	HGNC	ENSG00000223609	tier1	-	-	68	0	0.00	72	6	7.69
IPPK	0	genome.wustl.edu	37	9	95411847	95411847	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	9	95411847	95411847	C	T	SNP	IPPK	ENST00000287996	human	ensembl	74_37	-1	known	missense	c.302	p.C101Y	1.000	pfam_Ins_P5_2-kin	pfam_Ins_P5_2-kin	-	no_errors	IPPK	HGNC	ENSG00000127080	tier1	-	-	39	0	0.00	36	10	21.74
ITGAL	0	genome.wustl.edu	37	16	30507808	30507808	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	16	30507808	30507808	A	T	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	missense	c.1753	p.I585F	1.000	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844	tier1	-	-	102	0	0.00	102	16	13.56
KLHL28	0	genome.wustl.edu	37	14	45414994	45414994	+	Silent	SNP	A	A	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	14	45414994	45414994	A	T	SNP	KLHL28	ENST00000396128	human	ensembl	74_37	-1	known	silent	c.138	p.I46	0.996	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL28	HGNC	ENSG00000179454	tier1	-	-	113	0	0.00	97	15	13.39
KPRP	0	genome.wustl.edu	37	1	152732376	152732376	+	Silent	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	152732376	152732376	T	G	SNP	KPRP	ENST00000368773	human	ensembl	74_37	+1	known	silent	c.312	p.T104	0.000	NULL	NULL	-	no_errors	KPRP	HGNC	ENSG00000203786	tier1	-	-	225	0	0.00	189	33	14.80
LRBA	0	genome.wustl.edu	37	4	151511864	151511864	+	Splice_Site	SNP	C	C	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	4	151511864	151511864	C	G	SNP	LRBA	ENST00000357115	human	ensembl	74_37	-1	known	splice_site	c.6226+1	e39+1	1.000	-	-	-	no_errors	LRBA	HGNC	ENSG00000198589	tier1	-	-	77	0	0.00	84	9	9.57
LRP1B	0	genome.wustl.edu	37	2	141130576	141130576	+	Splice_Site	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	2	141130576	141130576	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	splice_site	c.10768+1	e69+1	1.000	-	-	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	167	0	0.00	148	13	8.07
LRRC7	0	genome.wustl.edu	37	1	70501889	70501889	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	70501889	70501889	T	G	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	missense	c.1967	p.L656R	1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122	tier1	-	-	74	0	0.00	71	6	7.69
LRRK2	0	genome.wustl.edu	37	12	40717052	40717052	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	12	40717052	40717052	A	C	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.5600	p.N1867T	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	80	0	0.00	76	17	18.28
MAP2	0	genome.wustl.edu	37	2	210558094	210558094	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	2	210558094	210558094	A	C	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	missense	c.1200	p.E400D	0.215	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018	tier1	-	-	54	0	0.00	54	7	11.48
MAP2	0	genome.wustl.edu	37	2	210559324	210559324	+	Silent	SNP	A	A	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	2	210559324	210559324	A	G	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	silent	c.2430	p.L810	0.981	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018	tier1	-	-	151	0	0.00	103	13	11.21
MCTP2	0	genome.wustl.edu	37	15	94913351	94913351	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	15	94913351	94913351	C	T	SNP	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	silent	c.1524	p.V508	0.236	NULL	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563	tier1	-	-	53	0	0.00	38	9	19.15
MGAM	0	genome.wustl.edu	37	7	141734541	141734541	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	7	141734541	141734541	A	C	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	missense	c.1859	p.K620T	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335				33	0	0.00	49	4	7.55
MRPL1	0	genome.wustl.edu	37	4	78783988	78783988	+	RNA	DEL	T	T	-			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	4	78783988	78783988	T	-	DEL	MRPL1	ENST00000515625	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	MRPL1	HGNC	ENSG00000169288	tier1			93	0	0.00	95	13	12.04
MTRF1	0	genome.wustl.edu	37	13	41826831	41826831	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	13	41826831	41826831	C	T	SNP	MTRF1	ENST00000430347	human	ensembl	74_37	-1	known	missense	c.686	p.C229Y	0.076	pfam_PCRF,smart_PCRF	pfam_Pep_chain_release_fac_I_II,pfam_PCRF,smart_PCRF	-	no_errors	MTRF1	HGNC	ENSG00000120662				48	0	0.00	38	4	9.52
MUC16	0	genome.wustl.edu	37	19	9088383	9088383	+	Silent	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	19	9088383	9088383	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.3432	p.G1144	0.002	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	83	0	0.00	52	6	10.34
NLRP2	0	genome.wustl.edu	37	19	55493653	55493653	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	19	55493653	55493653	G	T	SNP	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	missense	c.587	p.S196I	0.005	superfamily_P-loop_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556	tier1	-	-	166	0	0.00	154	17	9.94
NONO	0	genome.wustl.edu	37	X	70514185	70514185	+	Silent	SNP	C	C	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	X	70514185	70514185	C	A	SNP	NONO	ENST00000276079	human	ensembl	74_37	+1	known	silent	c.457	p.R153	0.882	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_NOPS,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NONO	HGNC	ENSG00000147140				83	0	0.00	65	4	5.80
NPR3	0	genome.wustl.edu	37	5	32780832	32780832	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	5	32780832	32780832	C	T	SNP	NPR3	ENST00000265074	human	ensembl	74_37	+1	known	silent	c.1200	p.I400	0.996	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_Ntpep_rcpt	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_Ntpep_rcpt	-	no_errors	NPR3	HGNC	ENSG00000113389	tier1	-	-	155	0	0.00	120	30	20.00
NXF4	0	genome.wustl.edu	37	X	101818671	101818671	+	RNA	SNP	A	A	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	X	101818671	101818671	A	C	SNP	NXF4	ENST00000360035	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.126	-	-	-	no_errors	NXF4	HGNC	ENSG00000196970	tier1	-	-	91	0	0.00	100	7	6.54
OR10AG1	0	genome.wustl.edu	37	11	55735598	55735598	+	Silent	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	55735598	55735598	G	A	SNP	OR10AG1	ENST00000312345	human	ensembl	74_37	-1	known	silent	c.342	p.Y114	0.357	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10AG1	HGNC	ENSG00000174970				52	0	0.00	64	4	5.88
OR2AK2	0	genome.wustl.edu	37	1	248129343	248129343	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	248129343	248129343	T	G	SNP	OR2AK2	ENST00000366480	human	ensembl	74_37	+1	known	missense	c.710	p.L237R	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2AK2	HGNC	ENSG00000187080	tier1	-	-	81	0	0.00	74	7	8.64
OR51Q1	0	genome.wustl.edu	37	11	5444225	5444225	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	5444225	5444225	C	T	SNP	OR51Q1	ENST00000300778	human	ensembl	74_37	+1	known	silent	c.795	p.R265	0.562	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51Q1	HGNC	ENSG00000167360	tier1	-	-	74	0	0.00	94	13	12.15
OR6C68	0	genome.wustl.edu	37	12	55886148	55886148	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	12	55886148	55886148	T	G	SNP	OR6C68	ENST00000379662	human	ensembl	74_37	+1	known	missense	c.2	p.M1R	0.000	NULL	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR6C68	HGNC	ENSG00000205327	tier1	-	-	66	0	0.00	62	15	19.48
OR7D2	0	genome.wustl.edu	37	19	9296767	9296767	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	19	9296767	9296767	T	G	SNP	OR7D2	ENST00000344248	human	ensembl	74_37	+1	known	missense	c.310	p.S104A	0.022	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7D2	HGNC	ENSG00000188000	tier1	-	-	129	0	0.00	120	8	6.25
OR8B8	0	genome.wustl.edu	37	11	124310330	124310330	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	124310330	124310330	A	C	SNP	OR8B8	ENST00000328064	human	ensembl	74_37	-1	known	missense	c.652	p.Y218D	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8B8	HGNC	ENSG00000197125	tier1	-	-	111	0	0.00	111	7	5.93
OR8H3	0	genome.wustl.edu	37	11	55890352	55890352	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	55890352	55890352	C	T	SNP	OR8H3	ENST00000313472	human	ensembl	74_37	+1	known	silent	c.504	p.F168	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H3	HGNC	ENSG00000181761	tier1	-	-	230	0	0.00	191	14	6.83
OR8H3	0	genome.wustl.edu	37	11	55890391	55890391	+	Silent	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	55890391	55890391	T	G	SNP	OR8H3	ENST00000313472	human	ensembl	74_37	+1	known	silent	c.543	p.T181	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H3	HGNC	ENSG00000181761	tier1	-	-	244	0	0.00	220	15	6.38
OTOGL	0	genome.wustl.edu	37	12	80660278	80660278	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	12	80660278	80660278	T	C	SNP	OTOGL	ENST00000458043	human	ensembl	74_37	+1	known	missense	c.2245	p.C749R	1.000	pfam_TIL_dom,superfamily_TIL_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_AbfB,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	OTOGL	HGNC	ENSG00000165899	tier1	-	-	28	0	0.00	28	6	17.65
PAFAH1B1	0	genome.wustl.edu	37	17	2573540	2573540	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	17	2573540	2573540	C	G	SNP	PAFAH1B1	ENST00000397195	human	ensembl	74_37	+1	known	missense	c.483	p.S161R	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Dynein_regulator_LIS1,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pirsf_Dynein_regulator_LIS1,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PAFAH1B1	HGNC	ENSG00000007168	tier1	-	-	150	0	0.00	145	35	19.34
PAMR1	0	genome.wustl.edu	37	11	35453971	35453971	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	35453971	35453971	T	C	SNP	PAMR1	ENST00000278360	human	ensembl	74_37	-1	known	missense	c.2147	p.H716R	0.934	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_EG-like_dom,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1	-	no_errors	PAMR1	HGNC	ENSG00000149090				80	0	0.00	66	4	5.63
PASK	0	genome.wustl.edu	37	2	242082442	242082442	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	2	242082442	242082442	C	T	SNP	PASK	ENST00000358649	human	ensembl	74_37	-1	known	silent	c.6	p.E2	0.948	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PAS_fold,superfamily_Kinase-like_dom,superfamily_PAS,smart_PAS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_PAS,pfscan_Prot_kinase_dom,tigrfam_PAS	-	no_errors	PASK	HGNC	ENSG00000115687				27	0	0.00	32	4	11.11
PCDH20	0	genome.wustl.edu	37	13	61987146	61987146	+	Silent	SNP	T	T	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	13	61987146	61987146	T	C	SNP	PCDH20	ENST00000409186	human	ensembl	74_37	-1	known	silent	c.1086	p.K362	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH20	HGNC	ENSG00000197991	tier1	-	-	109	0	0.00	90	6	6.25
PLCL1	0	genome.wustl.edu	37	2	198968559	198968559	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	2	198968559	198968559	T	G	SNP	PLCL1	ENST00000428675	human	ensembl	74_37	+1	known	missense	c.3004	p.F1002V	0.998	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL1	HGNC	ENSG00000115896	tier1	-	-	36	0	0.00	38	8	17.39
PLD5	0	genome.wustl.edu	37	1	242253408	242253408	+	Silent	SNP	A	A	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	242253408	242253408	A	G	SNP	PLD5	ENST00000536534	human	ensembl	74_37	-1	known	silent	c.1359	p.N453	0.997	smart_PLipase_D/transphosphatidylase	smart_PLipase_D/transphosphatidylase	-	no_errors	PLD5	HGNC	ENSG00000180287	tier1	-	-	73	0	0.00	71	9	11.25
POU4F2	0	genome.wustl.edu	37	4	147561786	147561786	+	Silent	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	4	147561786	147561786	C	T	SNP	POU4F2	ENST00000281321	human	ensembl	74_37	+1	known	silent	c.1056	p.I352	0.953	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615	tier1	-	-	170	0	0.00	171	17	9.04
PRDM2	0	genome.wustl.edu	37	1	14108836	14108836	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	14108836	14108836	C	T	SNP	PRDM2	ENST00000235372	human	ensembl	74_37	+1	known	missense	c.4546	p.R1516W	0.964	pirsf_RIZ_retinblastoma-bd_prot	pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pirsf_RIZ_retinblastoma-bd_prot,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM2	HGNC	ENSG00000116731	tier1	-	-	126	0	0.00	128	20	13.42
PRR19	0	genome.wustl.edu	37	19	42814019	42814019	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	19	42814019	42814019	C	G	SNP	PRR19	ENST00000341747	human	ensembl	74_37	+1	known	missense	c.283	p.L95V	0.001	NULL	NULL	-	no_errors	PRR19	HGNC	ENSG00000188368	tier1	-	-	81	0	0.00	70	6	7.89
PRR4	0	genome.wustl.edu	37	12	10999945	10999945	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	12	10999945	10999945	C	T	SNP	PRR4	ENST00000228811	human	ensembl	74_37	-1	known	missense	c.122	p.R41K	0.001	NULL	NULL	-	no_errors	PRR4	HGNC	ENSG00000111215	tier1	-	-	78	0	0.00	70	9	11.39
PTPRD	0	genome.wustl.edu	37	9	8636819	8636819	+	Silent	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	9	8636819	8636819	G	A	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	silent	c.90	p.P30	0.072	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	tier1	-	-	65	0	0.00	66	14	17.50
PTRF	0	genome.wustl.edu	37	17	40557228	40557228	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	17	40557228	40557228	C	T	SNP	PTRF	ENST00000357037	human	ensembl	74_37	-1	known	missense	c.650	p.R217H	1.000	NULL	NULL	-	no_errors	PTRF	HGNC	ENSG00000177469	tier1	-	-	168	0	0.00	136	19	12.26
RADIL	0	genome.wustl.edu	37	7	4874854	4874854	+	Nonsense_Mutation	SNP	A	A	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	7	4874854	4874854	A	T	SNP	RADIL	ENST00000445392	human	ensembl	74_37	-1	known	nonsense	c.795	p.C265*	1.000	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	-	no_errors	RADIL	HGNC	ENSG00000157927				18	0	0.00	26	4	13.33
RAPGEF5	0	genome.wustl.edu	37	7	22184830	22184830	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	7	22184830	22184830	A	G	SNP	RAPGEF5	ENST00000344041	human	ensembl	74_37	-1	known	missense	c.1559	p.I520T	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF5	HGNC	ENSG00000136237	tier1	-	-	24	0	0.00	12	4	25.00
RGS13	0	genome.wustl.edu	37	1	192628619	192628619	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	192628619	192628619	T	G	SNP	RGS13	ENST00000391995	human	ensembl	74_37	+1	known	missense	c.446	p.L149R	0.976	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS13	HGNC	ENSG00000127074	tier1	-	-	55	0	0.00	69	13	15.85
RUNDC1	0	genome.wustl.edu	37	17	41143701	41143701	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	17	41143701	41143701	C	T	SNP	RUNDC1	ENST00000361677	human	ensembl	74_37	+1	known	missense	c.1810	p.R604C	1.000	NULL	pfam_Run,smart_Run,pfscan_Run	-	no_errors	RUNDC1	HGNC	ENSG00000198863	tier1	-	-	52	0	0.00	38	5	11.63
SCAI	0	genome.wustl.edu	37	9	127765857	127765857	+	RNA	DEL	A	A	-			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	9	127765857	127765857	A	-	DEL	SCAI	ENST00000487795	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.025	-	-	-	no_errors	SCAI	HGNC	ENSG00000173611	tier1			47	0	0.00	43	5	10.42
SF3B2	0	genome.wustl.edu	37	11	65836145	65836146	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	65836145	65836146	-	A	INS	SF3B2	ENST00000322535	human	ensembl	74_37	+1	known	frame_shift_ins	c.2617_2618	p.R876fs	1.000:1.000	NULL	pfam_DUF382,pfam_PSP,pfam_SAP_dom,smart_SAP_dom,smart_PSP,pfscan_SAP_dom	-	no_errors	SF3B2	HGNC	ENSG00000087365	tier1			70	0	0.00	69	4	5.48
SHANK1	0	genome.wustl.edu	37	19	51215316	51215316	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	19	51215316	51215316	G	A	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.848	p.P283L	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1	-	-	59	0	0.00	57	11	16.18
SLC44A4	0	genome.wustl.edu	37	6	31832429	31832429	+	Silent	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	6	31832429	31832429	G	A	SNP	SLC44A4	ENST00000229729	human	ensembl	74_37	-1	known	silent	c.2011	p.L671	0.994	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A4	HGNC	ENSG00000204385	tier1	-	-	114	0	0.00	103	12	10.43
SOX6	0	genome.wustl.edu	37	11	16339918	16339919	+	RNA	INS	-	-	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	16339918	16339919	-	T	INS	SOX6	ENST00000533658	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.194:0.017	-	-	-	no_errors	SOX6	HGNC	ENSG00000110693	tier1			27	0	0.00	18	4	18.18
SPRR2G	0	genome.wustl.edu	37	1	153122522	153122522	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	153122522	153122522	T	G	SNP	SPRR2G	ENST00000368748	human	ensembl	74_37	-1	known	missense	c.65	p.K22T	0.001	NULL	NULL	-	no_errors	SPRR2G	HGNC	ENSG00000159516	tier1	-	-	82	0	0.00	65	15	18.75
SYDE2	0	genome.wustl.edu	37	1	85648219	85648219	+	Silent	SNP	G	G	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	1	85648219	85648219	G	C	SNP	SYDE2	ENST00000341460	human	ensembl	74_37	-1	known	silent	c.2106	p.V702	0.671	superfamily_C2_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE2	HGNC	ENSG00000097096	tier1	-	-	42	0	0.00	45	7	13.46
TG	0	genome.wustl.edu	37	8	134145875	134145875	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	8	134145875	134145875	A	G	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.8159	p.K2720R	1.000	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	tier1	-	-	30	0	0.00	31	7	18.42
TLR4	0	genome.wustl.edu	37	9	120475863	120475863	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	9	120475863	120475863	A	C	SNP	TLR4	ENST00000355622	human	ensembl	74_37	+1	known	missense	c.1457	p.N486T	0.031	pirsf_Toll-like_receptor,smart_Leu-rich_rpt_typical-subtyp	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR4	HGNC	ENSG00000136869	tier1	-	-	77	0	0.00	70	9	11.39
TMEM209	0	genome.wustl.edu	37	7	129815438	129815438	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	7	129815438	129815438	C	T	SNP	TMEM209	ENST00000397622	human	ensembl	74_37	-1	known	missense	c.1258	p.G420R	1.000	pfam_Cytochrome_B561-rel	pfam_Cytochrome_B561-rel	-	no_errors	TMEM209	HGNC	ENSG00000146842	tier1	-	-	24	0	0.00	19	5	20.83
TMEM231	0	genome.wustl.edu	37	16	75579381	75579381	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	16	75579381	75579381	G	A	SNP	TMEM231	ENST00000568377	human	ensembl	74_37	-1	known	missense	c.538	p.L180F	0.890	pfam_TMEM231	pfam_TMEM231	-	no_errors	TMEM231	HGNC	ENSG00000205084	tier1	-	-	38	0	0.00	48	9	15.79
TNIP3	0	genome.wustl.edu	37	4	122078382	122078382	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	4	122078382	122078382	G	A	SNP	TNIP3	ENST00000057513	human	ensembl	74_37	-1	known	missense	c.230	p.T77M	0.001	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730	tier1	-	-	298	0	0.00	269	30	10.03
TP53	0	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	17	7578406	7578406	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.524	p.R175H	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934578	-	87	0	0.00	55	9	14.06
TRIM49	0	genome.wustl.edu	37	11	89531678	89531678	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	89531678	89531678	T	G	SNP	TRIM49	ENST00000329758	human	ensembl	74_37	-1	known	missense	c.979	p.S327R	0.000	superfamily_ConA-like_lec_gl_sf,prints_Butyrophylin,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM49	HGNC	ENSG00000168930	tier1	-	-	65	0	0.00	61	7	10.29
TRIM49	0	genome.wustl.edu	37	11	89537506	89537506	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	11	89537506	89537506	T	A	SNP	TRIM49	ENST00000329758	human	ensembl	74_37	-1	known	missense	c.132	p.Q44H	0.045	smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM49	HGNC	ENSG00000168930	tier1	-	-	70	0	0.00	51	9	15.00
TUSC3	0	genome.wustl.edu	37	8	15517040	15517040	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	8	15517040	15517040	T	G	SNP	TUSC3	ENST00000503731	human	ensembl	74_37	+1	known	missense	c.451	p.F151V	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_OligosaccharylTrfase_OST3/OST6,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TUSC3	HGNC	ENSG00000104723	tier1	-	-	88	0	0.00	93	8	7.92
UPF3B	0	genome.wustl.edu	37	X	118968953	118968953	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	X	118968953	118968953	C	T	SNP	UPF3B	ENST00000276201	human	ensembl	74_37	-1	known	missense	c.1340	p.R447Q	1.000	NULL	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3B	HGNC	ENSG00000125351	tier1	-	-	138	0	0.00	123	8	6.11
USP16	0	genome.wustl.edu	37	21	30419465	30419465	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	21	30419465	30419465	G	A	SNP	USP16	ENST00000334352	human	ensembl	74_37	+1	known	missense	c.1834	p.D612N	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP16	HGNC	ENSG00000156256	tier1	-	-	124	0	0.00	92	12	11.54
XKR7	0	genome.wustl.edu	37	20	30584665	30584665	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	20	30584665	30584665	G	A	SNP	XKR7	ENST00000562532	human	ensembl	74_37	+1	known	missense	c.1145	p.R382H	0.998	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR7	HGNC	ENSG00000260903	tier1	-	-	28	0	0.00	35	7	16.67
ZFHX4	0	genome.wustl.edu	37	8	77764365	77764365	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	8	77764365	77764365	G	C	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.5208	p.Q1736H	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	78	0	0.00	71	11	13.41
ZMYND8	0	genome.wustl.edu	37	20	45920611	45920611	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	20	45920611	45920611	C	T	SNP	ZMYND8	ENST00000536340	human	ensembl	74_37	-1	known	missense	c.610	p.V204I	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_DUF3544,pfam_Bromodomain,pfam_PWWP_dom,pfam_Znf_PHD-finger,pfam_Znf_MYND,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND8	HGNC	ENSG00000101040	tier1	-	-	61	0	0.00	36	6	14.29
ZNF43	0	genome.wustl.edu	37	19	21990636	21990636	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	19	21990636	21990636	T	G	SNP	ZNF43	ENST00000354959	human	ensembl	74_37	-1	known	missense	c.2203	p.K735Q	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF43	HGNC	ENSG00000198521	tier1	-	-	73	0	0.00	62	5	7.46
ZNF440	0	genome.wustl.edu	37	19	11942382	11942382	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	19	11942382	11942382	C	T	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	missense	c.391	p.H131Y	0.021	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295	tier1	-	-	247	0	0.00	218	22	9.17
ZNF578	0	genome.wustl.edu	37	19	53015188	53015188	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A7NR-01A-11D-A34U-08	TCGA-IN-A7NR-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4300ef7d-030a-4486-b217-10886c229e24	8f57b280-f7bc-42ce-82e3-cf0bbc4c4d24	19	53015188	53015188	G	T	SNP	ZNF578	ENST00000421239	human	ensembl	74_37	+1	known	missense	c.1554	p.K518N	0.064	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF578	HGNC	ENSG00000258405	tier1	-	-	119	0	0.00	111	11	9.02
