Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCB1	0	genome.wustl.edu	37	7	87195492	87195492	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	87195492	87195492	G	T	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.596	p.T199K	0.997	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563	tier1	-	-	101	0	0.00	210	48	18.53
ADAMTSL3	0	genome.wustl.edu	37	15	84527585	84527585	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	15	84527585	84527585	C	T	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	silent	c.795	p.A265	0.998	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218	tier1	-	-	69	0	0.00	57	8	12.31
AHNAK	0	genome.wustl.edu	37	11	62292268	62292268	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	11	62292268	62292268	G	A	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	silent	c.9621	p.F3207	0.997	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	tier1	-	-	277	0	0.00	256	48	15.74
ALAD	0	genome.wustl.edu	37	9	116151366	116151366	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	9	116151366	116151366	G	A	SNP	ALAD	ENST00000409155	human	ensembl	74_37	-1	known	silent	c.822	p.A274	0.735	pfam_Porphobilinogen_synth,pirsf_Porphobilinogen_synth,prints_Porphobilinogen_synth	pfam_Porphobilinogen_synth,pirsf_Porphobilinogen_synth,prints_Porphobilinogen_synth	-	no_errors	ALAD	HGNC	ENSG00000148218	tier1	-	-	40	0	0.00	10	7	41.18
ALMS1	0	genome.wustl.edu	37	2	73800203	73800203	+	Silent	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	73800203	73800203	T	G	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	silent	c.11196	p.T3732	0.957	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	tier1	-	-	58	0	0.00	40	17	29.82
ASXL3	0	genome.wustl.edu	37	18	31326040	31326040	+	Silent	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	18	31326040	31326040	T	C	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	silent	c.6228	p.C2076	1.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431	tier1	-	-	73	0	0.00	24	30	55.56
ATP10A	0	genome.wustl.edu	37	15	25953238	25953238	+	Silent	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	15	25953238	25953238	T	C	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	silent	c.2460	p.K820	0.836	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	46	0	0.00	14	9	39.13
ATP10A	0	genome.wustl.edu	37	15	25953245	25953245	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	15	25953245	25953245	A	C	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.2453	p.L818R	1.000	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	47	0	0.00	17	10	37.04
BCAT2	0	genome.wustl.edu	37	19	49303258	49303258	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	49303258	49303258	G	T	SNP	BCAT2	ENST00000316273	human	ensembl	74_37	-1	known	missense	c.511	p.P171T	1.000	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	-	no_errors	BCAT2	HGNC	ENSG00000105552	tier1	-	-	48	0	0.00	23	9	28.12
BEND2	0	genome.wustl.edu	37	X	18209166	18209166	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	18209166	18209166	C	A	SNP	BEND2	ENST00000380033	human	ensembl	74_37	-1	known	missense	c.1243	p.D415Y	0.000	NULL	pfam_BEN_domain	-	no_errors	BEND2	HGNC	ENSG00000177324	tier1	-	-	119	0	0.00	58	19	24.68
BLZF1	0	genome.wustl.edu	37	1	169338789	169338789	+	Splice_Site	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	169338789	169338789	G	A	SNP	BLZF1	ENST00000329281	human	ensembl	74_37	+1	known	splice_site	c.28+1	e1+1	1.000	-	-	-	no_errors	BLZF1	HGNC	ENSG00000117475	tier1	-	-	32	0	0.00	12	5	29.41
BSN	0	genome.wustl.edu	37	3	49700578	49700578	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	3	49700578	49700578	G	A	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.10987	p.G3663R	0.003	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	tier1	-	-	16	0	0.00	9	9	50.00
C17orf76-AS1	0	genome.wustl.edu	37	17	16344523	16344524	+	RNA	INS	-	-	AA			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	16344523	16344524	-	AA	INS	C17orf76-AS1	ENST00000460249	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	C17orf76-AS1	HGNC	ENSG00000175061	tier1			69	0	0.00	31	3	8.82
CASKIN1	0	genome.wustl.edu	37	16	2237059	2237059	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	16	2237059	2237059	G	-	DEL	CASKIN1	ENST00000343516	human	ensembl	74_37	-1	known	frame_shift_del	c.850	p.L284fs	0.962	superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_SH3_domain,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_SH3_domain,prints_Ankyrin_rpt	-	no_errors	CASKIN1	HGNC	ENSG00000167971	tier1			102	0	0.00	64	10	13.51
CCL11	0	genome.wustl.edu	37	17	32614137	32614137	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	32614137	32614137	C	T	SNP	CCL11	ENST00000305869	human	ensembl	74_37	+1	known	silent	c.99	p.C33	0.997	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL11	HGNC	ENSG00000172156	tier1	-	-	51	0	0.00	36	11	23.40
CCNB3	0	genome.wustl.edu	37	X	50052855	50052855	+	Silent	SNP	T	T	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	50052855	50052855	T	A	SNP	CCNB3	ENST00000276014	human	ensembl	74_37	+1	known	silent	c.1686	p.S562	0.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082	tier1	-	-	49	0	0.00	31	13	29.55
CDKN2A	0	genome.wustl.edu	37	9	21974760	21974760	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	9	21974760	21974760	C	G	SNP	CDKN2A	ENST00000446177	human	ensembl	74_37	-1	known	missense	c.67	p.G23R	0.963	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889	tier1	-	-	68	0	0.00	26	23	46.94
CEACAM5	0	genome.wustl.edu	37	19	42218979	42218980	+	In_Frame_Ins	INS	-	-	AGG			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	42218979	42218980	-	AGG	INS	CEACAM5	ENST00000221992	human	ensembl	74_37	+1	known	in_frame_ins	c.514_515	p.173in_frame_insE	0.007:0.009	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM5	HGNC	ENSG00000105388	tier1			196	0	0.00	100	26	20.63
CRISPLD1	0	genome.wustl.edu	37	8	75898349	75898349	+	Missense_Mutation	SNP	G	G	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	8	75898349	75898349	G	T	SNP	CRISPLD1	ENST00000262207	human	ensembl	74_37	+1	known	missense	c.127	p.D43Y	1.000	superfamily_CAP_domain	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005	tier1	-	-	58	0	0.00	46	18	28.12
CSNK2A3	0	genome.wustl.edu	37	11	11374128	11374128	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	11	11374128	11374128	T	G	SNP	CSNK2A3	ENST00000528848	human	ensembl	74_37	-1	novel	missense	c.539	p.E180A	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK2A3	HGNC	ENSG00000254598	tier1	-	-	88	0	0.00	71	29	29.00
DMD	0	genome.wustl.edu	37	X	31525440	31525440	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	31525440	31525440	T	G	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.8348	p.N2783T	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	110	0	0.00	81	18	18.18
DPY19L2P1	0	genome.wustl.edu	37	7	35131356	35131357	+	RNA	DEL	TG	TG	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	35131356	35131357	TG	-	DEL	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212	tier1			13	0	0.00	4	2	33.33
EEF1E1	0	genome.wustl.edu	37	6	8097577	8097577	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	8097577	8097577	C	T	SNP	EEF1E1	ENST00000379715	human	ensembl	74_37	-1	known	missense	c.211	p.V71I	1.000	superfamily_Glutathione-S-Trfase_C-like	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	EEF1E1	HGNC	ENSG00000124802	tier1	-	-	151	0	0.00	137	13	8.61
EFCAB4A	0	genome.wustl.edu	37	11	831245	831245	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	11	831245	831245	G	T	SNP	EFCAB4A	ENST00000450448	human	ensembl	74_37	+1	known	nonsense	c.808	p.E270*	0.997	NULL	pfscan_EF_hand_dom	-	no_errors	EFCAB4A	HGNC	ENSG00000177685	tier1	-	-	43	0	0.00	28	12	30.00
ENSG00000234864	0	genome.wustl.edu	37	10	43197559	43197559	+	RNA	SNP	G	G	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	10	43197559	43197559	G	C	SNP	ENSG00000234864	ENST00000439913	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AL022344.5	Clone_based_vega_gene	ENSG00000234864	tier1	-	-	60	0	0.00	30	6	16.67
ENSG00000260741	0	genome.wustl.edu	37	16	23224345	23224345	+	RNA	SNP	A	A	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	16	23224345	23224345	A	C	SNP	ENSG00000260741	ENST00000563471	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTC-391G2.1	Clone_based_vega_gene	ENSG00000260741	tier1	-	-	25	0	0.00	23	7	23.33
FAT4	0	genome.wustl.edu	37	4	126389761	126389761	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	4	126389761	126389761	T	G	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.11994	p.I3998M	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	108	0	0.00	46	37	44.58
FEZF2	0	genome.wustl.edu	37	3	62356908	62356908	+	Silent	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	3	62356908	62356908	T	C	SNP	FEZF2	ENST00000283268	human	ensembl	74_37	-1	known	silent	c.1104	p.K368	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	FEZF2	HGNC	ENSG00000153266	tier1	-	-	69	0	0.00	19	18	48.65
FKBP7	0	genome.wustl.edu	37	2	179330469	179330469	+	RNA	DEL	A	A	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	179330469	179330469	A	-	DEL	FKBP7	ENST00000464248	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FKBP7	HGNC	ENSG00000079150	tier1			20	0	0.00	26	3	10.34
FMR1	0	genome.wustl.edu	37	X	147009864	147009864	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	147009864	147009864	G	C	SNP	FMR1	ENST00000370475	human	ensembl	74_37	+1	known	missense	c.223	p.E75Q	1.000	pfam_Agenet-like_dom	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FMR1	HGNC	ENSG00000102081	tier1	-	-	212	0	0.00	151	19	11.18
FRYL	0	genome.wustl.edu	37	4	48529989	48529989	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	4	48529989	48529989	G	A	SNP	FRYL	ENST00000358350	human	ensembl	74_37	-1	known	missense	c.7139	p.S2380L	0.999	NULL	superfamily_ARM-type_fold	-	no_errors	FRYL	HGNC	ENSG00000075539	tier1	-	-	67	0	0.00	64	10	13.51
FSCB	0	genome.wustl.edu	37	14	44974298	44974298	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	14	44974298	44974298	G	A	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	silent	c.1893	p.P631	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139				34	0	0.00	29	2	6.45
GABRA4	0	genome.wustl.edu	37	4	46930377	46930377	+	Silent	SNP	A	A	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	4	46930377	46930377	A	C	SNP	GABRA4	ENST00000264318	human	ensembl	74_37	-1	known	silent	c.1530	p.P510	0.013	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABBAa4_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA4	HGNC	ENSG00000109158	tier1	-	-	91	0	0.00	94	25	21.01
GCK	0	genome.wustl.edu	37	7	44185220	44185220	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	44185220	44185220	G	A	SNP	GCK	ENST00000345378	human	ensembl	74_37	-1	known	missense	c.1132	p.R378C	1.000	pfam_Hexokinase_C,prints_Hexokinase	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	GCK	HGNC	ENSG00000106633	tier1	-	-	20	0	0.00	13	6	31.58
GHR	0	genome.wustl.edu	37	5	42719133	42719133	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	5	42719133	42719133	G	A	SNP	GHR	ENST00000230882	human	ensembl	74_37	+1	known	silent	c.1524	p.K508	1.000	NULL	pfam_Growth/epo_recpt_lig-bind,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	GHR	HGNC	ENSG00000112964	tier1	-	-	54	0	0.00	21	20	48.78
GNAS	0	genome.wustl.edu	37	20	57429166	57429166	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	20	57429166	57429166	C	A	SNP	GNAS	ENST00000306120	human	ensembl	74_37	+1	putative	missense	c.656	p.A219E	0.938	NULL	NULL	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	37	0	0.00	18	11	37.93
HECW2	0	genome.wustl.edu	37	2	197199185	197199185	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	197199185	197199185	G	A	SNP	HECW2	ENST00000260983	human	ensembl	74_37	-1	known	missense	c.458	p.T153M	1.000	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW2	HGNC	ENSG00000138411	tier1	-	-	10	0	0.00	9	6	40.00
HMBS	0	genome.wustl.edu	37	11	118958998	118958998	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	11	118958998	118958998	G	A	SNP	HMBS	ENST00000278715	human	ensembl	74_37	+1	known	missense	c.67	p.V23M	0.976	pfam_Porphobilin_deaminase_N,pirsf_4pyrrol_synth_OHMeBilane_synth,tigrfam_4pyrrol_synth_OHMeBilane_synth	pfam_Porphobilin_deaminase_N,pfam_Porphobilinogen_deaminase_C,superfamily_Porphobilinogen_deaminase_C,pirsf_4pyrrol_synth_OHMeBilane_synth,prints_4pyrrol_synth_OHMeBilane_synth,tigrfam_4pyrrol_synth_OHMeBilane_synth	-	no_errors	HMBS	HGNC	ENSG00000256269	tier1	-	-	115	0	0.00	57	38	40.00
HNRNPL	0	genome.wustl.edu	37	19	39336512	39336512	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	39336512	39336512	G	A	SNP	HNRNPL	ENST00000221419	human	ensembl	74_37	-1	known	missense	c.605	p.P202L	1.000	smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPL	HGNC	ENSG00000104824	tier1	-	-	82	0	0.00	38	12	24.00
IGBP1	0	genome.wustl.edu	37	X	69366608	69366608	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	69366608	69366608	T	C	SNP	IGBP1	ENST00000342206	human	ensembl	74_37	+1	known	missense	c.608	p.I203T	0.924	pfam_TAP42-like	pfam_TAP42-like	-	no_errors	IGBP1	HGNC	ENSG00000089289				57	0	0.00	40	6	13.04
IL2RG	0	genome.wustl.edu	37	X	70327686	70327686	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	70327686	70327686	G	-	DEL	IL2RG	ENST00000374202	human	ensembl	74_37	-1	known	frame_shift_del	c.1010	p.P337fs	0.887	NULL	pfam_IL-6_rcpt_alpha-bd,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL2RG	HGNC	ENSG00000147168	tier1			41	0	0.00	23	2	8.00
IMMT	0	genome.wustl.edu	37	2	86385683	86385683	+	RNA	DEL	C	C	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	86385683	86385683	C	-	DEL	IMMT	ENST00000490238	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IMMT	HGNC	ENSG00000132305	tier1			8	0	0.00	3	3	50.00
IRAK2	0	genome.wustl.edu	37	3	10283810	10283810	+	Silent	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	3	10283810	10283810	T	G	SNP	IRAK2	ENST00000256458	human	ensembl	74_37	+1	known	silent	c.1776	p.T592	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IRAK2	HGNC	ENSG00000134070	tier1	-	-	57	0	0.00	27	28	50.91
ISCU	0	genome.wustl.edu	37	12	108961019	108961019	+	Silent	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	12	108961019	108961019	T	C	SNP	ISCU	ENST00000311893	human	ensembl	74_37	+1	known	silent	c.393	p.L131	0.029	pfam_NIF_FeS_clus_asmbl_NifU_N,tigrfam_ISC_FeS_clus_asmbl_IscU	pfam_NIF_FeS_clus_asmbl_NifU_N,tigrfam_ISC_FeS_clus_asmbl_IscU	-	no_errors	ISCU	HGNC	ENSG00000136003	tier1	-	-	71	0	0.00	49	18	26.87
JARID2	0	genome.wustl.edu	37	6	15501508	15501508	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	15501508	15501508	C	T	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	silent	c.2316	p.S772	1.000	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083	tier1	-	-	122	0	0.00	43	54	55.67
KCNAB3	0	genome.wustl.edu	37	17	7827809	7827809	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	7827809	7827809	C	T	SNP	KCNAB3	ENST00000303790	human	ensembl	74_37	-1	known	missense	c.635	p.R212Q	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,tigrfam_K_chnl_volt-dep_bsu_KCNAB	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB3,prints_K_chnl_volt-dep_bsu_KCNAB1,tigrfam_K_chnl_volt-dep_bsu_KCNAB	-	no_errors	KCNAB3	HGNC	ENSG00000170049	tier1	-	-	48	0	0.00	38	11	22.45
KIAA0319	0	genome.wustl.edu	37	6	24596276	24596276	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	24596276	24596276	G	A	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	missense	c.626	p.T209M	0.000	NULL	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261	tier1	rs146508644	-	45	0	0.00	17	10	37.04
KIF2B	0	genome.wustl.edu	37	17	51901630	51901630	+	Silent	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	51901630	51901630	T	G	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	silent	c.1236	p.T412	0.998	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	tier1	-	-	48	0	0.00	36	22	37.93
KLC4	0	genome.wustl.edu	37	6	43034801	43034801	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	43034801	43034801	T	A	SNP	KLC4	ENST00000259708	human	ensembl	74_37	+1	known	missense	c.913	p.L305M	0.988	pfscan_TPR-contain_dom	pfam_Rabaptin_Rab5-bd_dom,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Kinesin_light	-	no_errors	KLC4	HGNC	ENSG00000137171	tier1	-	-	67	0	0.00	61	11	15.28
KLHL1	0	genome.wustl.edu	37	13	70371033	70371033	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	13	70371033	70371033	C	T	SNP	KLHL1	ENST00000377844	human	ensembl	74_37	-1	known	missense	c.1476	p.M492I	1.000	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL1	HGNC	ENSG00000150361	tier1	-	-	173	0	0.00	115	24	17.27
LCE1F	0	genome.wustl.edu	37	1	152748991	152748991	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	152748991	152748991	C	T	SNP	LCE1F	ENST00000334371	human	ensembl	74_37	+1	known	silent	c.144	p.S48	0.786	NULL	NULL	-	no_errors	LCE1F	HGNC	ENSG00000240386	tier1	-	-	103	0	0.00	60	6	9.09
LCE1F	0	genome.wustl.edu	37	1	152748994	152748994	+	Silent	SNP	A	A	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	152748994	152748994	A	G	SNP	LCE1F	ENST00000334371	human	ensembl	74_37	+1	known	silent	c.147	p.G49	0.848	NULL	NULL	-	no_errors	LCE1F	HGNC	ENSG00000240386	tier1	-	-	100	0	0.00	62	6	8.82
LOC100131825	0	genome.wustl.edu	37	1	159166613	159166613	+	RNA	DEL	T	T	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	159166613	159166613	T	-	DEL	LOC100131825	ENST00000415675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTA-134P22.2	Clone_based_vega_gene	ENSG00000225670	tier1			17	0	0.00	14	3	17.65
LRP1B	0	genome.wustl.edu	37	2	141598520	141598520	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	141598520	141598520	T	G	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.5081	p.K1694T	1.000	smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	87	0	0.00	63	25	28.41
LRRC37A3	0	genome.wustl.edu	37	17	62856327	62856327	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	62856327	62856327	G	A	SNP	LRRC37A3	ENST00000319651	human	ensembl	74_37	-1	known	missense	c.3937	p.R1313C	0.001	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A3	HGNC	ENSG00000176809	tier1	rs139741056	-	279	0	0.00	214	83	27.95
MACF1	0	genome.wustl.edu	37	1	39893908	39893908	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	39893908	39893908	C	T	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	silent	c.10566	p.F3522	1.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	29	0	0.00	17	5	22.73
MAGEA1	0	genome.wustl.edu	37	X	152482527	152482527	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	152482527	152482527	C	A	SNP	MAGEA1	ENST00000356661	human	ensembl	74_37	-1	known	missense	c.484	p.A162S	0.005	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA1	HGNC	ENSG00000198681	tier1	-	-	159	0	0.00	95	32	25.20
MAP7D2	0	genome.wustl.edu	37	X	20028955	20028955	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	20028955	20028955	G	A	SNP	MAP7D2	ENST00000379643	human	ensembl	74_37	-1	known	missense	c.2288	p.P763L	1.000	NULL	pfam_MAP7	-	no_errors	MAP7D2	HGNC	ENSG00000184368	tier1	-	-	159	0	0.00	86	31	26.50
MARCH4	0	genome.wustl.edu	37	2	217142483	217142483	+	Silent	SNP	A	A	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	217142483	217142483	A	C	SNP	MARCH4	ENST00000273067	human	ensembl	74_37	-1	known	silent	c.777	p.T259	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH4	HGNC	ENSG00000144583	tier1	-	-	82	0	0.00	76	21	21.43
MB21D1	0	genome.wustl.edu	37	6	74138522	74138522	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	74138522	74138522	C	A	SNP	MB21D1	ENST00000370315	human	ensembl	74_37	-1	known	missense	c.1127	p.R376L	1.000	pfam_Mab-21_dom	pfam_Mab-21_dom	-	no_errors	MB21D1	HGNC	ENSG00000164430	tier1	-	-	111	0	0.00	81	12	12.90
MCF2L	0	genome.wustl.edu	37	13	113556592	113556592	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	13	113556592	113556592	G	A	SNP	MCF2L	ENST00000375608	human	ensembl	74_37	+1	known	missense	c.76	p.E26K	0.453	NULL	pfam_DH-domain,pfam_Spectrin_repeat,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	MCF2L	HGNC	ENSG00000126217	tier1	-	-	33	0	0.00	13	11	45.83
MED25	0	genome.wustl.edu	37	19	50333986	50333986	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	50333986	50333986	G	A	SNP	MED25	ENST00000312865	human	ensembl	74_37	+1	known	missense	c.943	p.G315R	0.984	pfam_Mediator_Med25_SD1	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC	ENSG00000104973	tier1	-	-	52	0	0.00	26	13	33.33
MN1	0	genome.wustl.edu	37	22	28193444	28193444	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	22	28193444	28193444	C	T	SNP	MN1	ENST00000302326	human	ensembl	74_37	-1	known	missense	c.3088	p.G1030S	1.000	NULL	NULL	-	no_errors	MN1	HGNC	ENSG00000169184	tier1	-	-	82	0	0.00	54	25	31.65
MORF4L1	0	genome.wustl.edu	37	15	79178512	79178512	+	Missense_Mutation	SNP	T	T	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	15	79178512	79178512	T	A	SNP	MORF4L1	ENST00000331268	human	ensembl	74_37	+1	known	missense	c.302	p.V101E	1.000	superfamily_Chromodomain-like,pirsf_EAF3/MRG15	pfam_MRG_dom,pfam_Tudor-knot,superfamily_Chromodomain-like,pirsf_EAF3/MRG15	-	no_errors	MORF4L1	HGNC	ENSG00000185787	tier1	-	-	80	0	0.00	62	20	24.39
MUC16	0	genome.wustl.edu	37	19	9084624	9084624	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	9084624	9084624	T	-	DEL	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_del	c.7191	p.G2398fs	0.006	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1			58	0	0.00	18	2	10.00
MYOM3	0	genome.wustl.edu	37	1	24392333	24392333	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	24392333	24392333	C	T	SNP	MYOM3	ENST00000329601	human	ensembl	74_37	-1	known	silent	c.3588	p.K1196	0.065	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM3	HGNC	ENSG00000142661	tier1	-	-	39	0	0.00	32	9	21.95
NBEA	0	genome.wustl.edu	37	13	35758163	35758163	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	13	35758163	35758163	G	A	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.4882	p.A1628T	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	36	0	0.00	15	8	34.78
NCAM2	0	genome.wustl.edu	37	21	22710853	22710853	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	21	22710853	22710853	A	G	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	missense	c.1043	p.K348R	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654	tier1	-	-	39	0	0.00	11	9	45.00
NDUFA9	0	genome.wustl.edu	37	12	4763607	4763607	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	12	4763607	4763607	C	T	SNP	NDUFA9	ENST00000266544	human	ensembl	74_37	+1	known	nonsense	c.199	p.R67*	1.000	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_NmrA	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_NmrA	-	no_errors	NDUFA9	HGNC	ENSG00000139180	tier1	-	-	118	0	0.00	78	13	14.13
NID1	0	genome.wustl.edu	37	1	236157045	236157045	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	236157045	236157045	C	T	SNP	NID1	ENST00000264187	human	ensembl	74_37	-1	known	silent	c.2655	p.A885	0.013	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd_dom,superfamily_GFP,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962	tier1	-	-	23	0	0.00	9	7	43.75
NLRC3	0	genome.wustl.edu	37	16	3614337	3614337	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	16	3614337	3614337	C	T	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.742	p.V248I	0.000	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984	tier1	-	-	20	0	0.00	16	9	36.00
NME5	0	genome.wustl.edu	37	5	137451430	137451430	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	5	137451430	137451430	C	T	SNP	NME5	ENST00000265191	human	ensembl	74_37	-1	known	silent	c.579	p.L193	0.976	pfam_Dpy-30_motif,pirsf_NDK_H5	pfam_Nucleoside_diP_kinase,pfam_Dpy-30_motif,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,pirsf_NDK_H5,prints_Nucleoside_diP_kinase	-	no_errors	NME5	HGNC	ENSG00000112981	tier1	-	-	50	0	0.00	20	19	48.72
NMNAT2	0	genome.wustl.edu	37	1	183255852	183255852	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	183255852	183255852	G	A	SNP	NMNAT2	ENST00000287713	human	ensembl	74_37	-1	known	silent	c.393	p.N131	0.638	pfam_Cyt_trans-like	pfam_Cyt_trans-like	-	no_errors	NMNAT2	HGNC	ENSG00000157064	tier1	-	-	74	0	0.00	32	8	20.00
NOL11	0	genome.wustl.edu	37	17	65717632	65717632	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	65717632	65717632	G	T	SNP	NOL11	ENST00000253247	human	ensembl	74_37	+1	known	nonsense	c.451	p.E151*	1.000	NULL	pfam_NUC205	-	no_errors	NOL11	HGNC	ENSG00000130935	tier1	-	-	93	0	0.00	67	20	22.73
OLFML2B	0	genome.wustl.edu	37	1	161953551	161953551	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	161953551	161953551	G	A	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	nonsense	c.2167	p.Q723*	1.000	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745	tier1	-	-	229	0	0.00	126	22	14.86
OPHN1	0	genome.wustl.edu	37	X	67502908	67502908	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	67502908	67502908	C	A	SNP	OPHN1	ENST00000355520	human	ensembl	74_37	-1	known	missense	c.302	p.R101M	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	OPHN1	HGNC	ENSG00000079482	tier1	-	-	30	0	0.00	36	8	18.18
OR2B6	0	genome.wustl.edu	37	6	27925182	27925182	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	27925182	27925182	T	C	SNP	OR2B6	ENST00000244623	human	ensembl	74_37	+1	known	missense	c.164	p.L55P	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B6	HGNC	ENSG00000124657	tier1	-	-	167	0	0.00	151	26	14.61
OR4N4	0	genome.wustl.edu	37	15	22382957	22382957	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	15	22382957	22382957	T	C	SNP	OR4N4	ENST00000328795	human	ensembl	74_37	+1	known	missense	c.485	p.L162P	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N4	HGNC	ENSG00000183706	tier1	-	-	266	0	0.00	195	27	12.16
PABPN1	0	genome.wustl.edu	37	14	23792231	23792233	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	14	23792231	23792233	GAG	-	DEL	PABPN1	ENST00000216727	human	ensembl	74_37	+1	known	in_frame_del	c.490_492	p.E165in_frame_del	1.000:1.000:0.935	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PABPN1	HGNC	ENSG00000100836	tier1			120	0	0.00	84	18	17.65
PAPPA2	0	genome.wustl.edu	37	1	176740272	176740272	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	176740272	176740272	A	T	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.4671	p.K1557N	0.960	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	45	0	0.00	44	5	10.20
PAQR4	0	genome.wustl.edu	37	16	3021825	3021825	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	16	3021825	3021825	T	G	SNP	PAQR4	ENST00000318782	human	ensembl	74_37	+1	known	missense	c.698	p.F233C	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR4	HGNC	ENSG00000162073	tier1	-	-	61	0	0.00	40	17	29.82
PASD1	0	genome.wustl.edu	37	X	150789469	150789469	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	150789469	150789469	A	C	SNP	PASD1	ENST00000370357	human	ensembl	74_37	+1	known	missense	c.275	p.K92T	0.000	superfamily_PAS,smart_PAS,pfscan_PAS	superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PASD1	HGNC	ENSG00000166049	tier1	-	-	103	0	0.00	38	52	57.78
PAX6	0	genome.wustl.edu	37	11	31823145	31823145	+	Silent	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	11	31823145	31823145	C	A	SNP	PAX6	ENST00000379107	human	ensembl	74_37	-1	known	silent	c.363	p.L121	1.000	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom	pfam_Paired_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,prints_Paired_dom,pfscan_Homeobox_dom,pfscan_Paired_dom	-	no_errors	PAX6	HGNC	ENSG00000007372	tier1	-	-	122	0	0.00	82	41	33.33
PCDH15	0	genome.wustl.edu	37	10	55570438	55570438	+	Splice_Site	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	10	55570438	55570438	T	G	SNP	PCDH15	ENST00000414778	human	ensembl	74_37	-1	known	splice_site	c.4374-2	e33-2	1.000	-	-	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	72	0	0.00	31	13	29.55
PCDH15	0	genome.wustl.edu	37	10	55826610	55826610	+	Missense_Mutation	SNP	A	A	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	10	55826610	55826610	A	T	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.2127	p.D709E	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	75	0	0.00	40	24	37.50
PCDHGA8	0	genome.wustl.edu	37	5	140774033	140774033	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	5	140774033	140774033	C	A	SNP	PCDHGA8	ENST00000398604	human	ensembl	74_37	+1	known	missense	c.1653	p.F551L	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767	tier1	-	-	208	0	0.00	68	78	53.42
PCLO	0	genome.wustl.edu	37	7	82595506	82595506	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	82595506	82595506	G	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.3598	p.L1200V	0.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	134	0	0.00	87	22	20.18
PFKFB4	0	genome.wustl.edu	37	3	48573837	48573837	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	3	48573837	48573837	G	A	SNP	PFKFB4	ENST00000232375	human	ensembl	74_37	-1	known	missense	c.692	p.A231V	0.003	pfam_6Phosfructo_kin,superfamily_P-loop_NTPase,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,superfamily_P-loop_NTPase,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB4	HGNC	ENSG00000114268	tier1	-	-	139	0	0.00	46	48	51.06
PIKFYVE	0	genome.wustl.edu	37	2	209185082	209185082	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	209185082	209185082	A	C	SNP	PIKFYVE	ENST00000264380	human	ensembl	74_37	+1	known	missense	c.2189	p.Q730P	1.000	pfam_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	pfam_PInositol-4-P-5-kinase_core,pfam_Cpn60/TCP-1,pfam_DEP_dom,pfam_Znf_FYVE,superfamily_GroEL-like_apical_dom,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,smart_DEP_dom,smart_PInositol-4P-5-kinase_core_sub,pfscan_DEP_dom,pfscan_Znf_FYVE-rel	-	no_errors	PIKFYVE	HGNC	ENSG00000115020	tier1	-	-	117	0	0.00	78	29	27.10
PLXNA3	0	genome.wustl.edu	37	X	153692762	153692762	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	153692762	153692762	C	T	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	missense	c.1846	p.R616W	0.974	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827	tier1	-	-	109	0	0.00	79	14	15.05
PPP1R21	0	genome.wustl.edu	37	2	48701835	48701835	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	48701835	48701835	T	C	SNP	PPP1R21	ENST00000294952	human	ensembl	74_37	+1	known	missense	c.1102	p.C368R	1.000	pfam_KLRAQ/TTKRSYEDQ_C	pfam_KLRAQ/TTKRSYEDQ_C,pfam_Unchr_KLRAQ/TTKRSYEDQ_N,superfamily_Ferritin-like_SF	-	no_errors	PPP1R21	HGNC	ENSG00000162869	tier1	-	-	129	0	0.00	101	33	24.63
PRAMEF11	0	genome.wustl.edu	37	1	12888371	12888371	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	12888371	12888371	T	G	SNP	PRAMEF11	ENST00000535591	human	ensembl	74_37	-1	known	missense	c.153	p.Q51H	0.000	NULL	NULL	-	no_errors	PRAMEF11	HGNC	ENSG00000204513	tier1	rs200394590	-	26	0	0.00	12	3	20.00
PRKCB	0	genome.wustl.edu	37	16	24183670	24183670	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	16	24183670	24183670	A	G	SNP	PRKCB	ENST00000303531	human	ensembl	74_37	+1	known	missense	c.1319	p.E440G	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Protein_kinase_C_a/b/g,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCB	HGNC	ENSG00000166501	tier1	-	-	42	0	0.00	27	11	28.95
PRKDC	0	genome.wustl.edu	37	8	48711778	48711778	+	Silent	SNP	A	A	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	8	48711778	48711778	A	G	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.10287	p.N3429	0.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	58	0	0.00	41	19	31.67
PROM2	0	genome.wustl.edu	37	2	95953961	95953961	+	Silent	SNP	G	G	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	95953961	95953961	G	C	SNP	PROM2	ENST00000317620	human	ensembl	74_37	+1	known	silent	c.2247	p.V749	1.000	pfam_Prominin	pfam_Prominin	-	no_errors	PROM2	HGNC	ENSG00000155066	tier1	-	-	71	0	0.00	50	17	25.37
PRSS16	0	genome.wustl.edu	37	6	27222906	27222906	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	27222906	27222906	G	A	SNP	PRSS16	ENST00000230582	human	ensembl	74_37	+1	known	missense	c.1472	p.R491H	1.000	pfam_Peptidase_S28	pfam_Peptidase_S28	-	no_errors	PRSS16	HGNC	ENSG00000112812	tier1	-	-	88	0	0.00	38	43	53.09
RAB3GAP2	0	genome.wustl.edu	37	1	220330778	220330778	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	220330778	220330778	G	A	SNP	RAB3GAP2	ENST00000358951	human	ensembl	74_37	-1	known	missense	c.3389	p.A1130V	0.902	NULL	superfamily_WD40_repeat_dom	-	no_errors	RAB3GAP2	HGNC	ENSG00000118873	tier1	-	-	114	0	0.00	52	32	38.10
RAI1	0	genome.wustl.edu	37	17	17699993	17699995	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	17699993	17699995	GCA	-	DEL	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	in_frame_del	c.3731_3733	p.S1248in_frame_del	0.003:0.000:0.000	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557	tier1			36	0	0.00	38	2	5.00
RBMX2	0	genome.wustl.edu	37	X	129546642	129546642	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	129546642	129546642	G	A	SNP	RBMX2	ENST00000305536	human	ensembl	74_37	+1	known	silent	c.789	p.K263	0.030	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMX2	HGNC	ENSG00000134597	tier1	-	-	70	0	0.00	27	17	38.64
RGPD4	0	genome.wustl.edu	37	2	108488005	108488005	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	108488005	108488005	T	C	SNP	RGPD4	ENST00000354986	human	ensembl	74_37	+1	known	missense	c.3545	p.L1182P	1.000	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862	tier1	-	-	26	0	0.00	17	10	37.04
RGS10	0	genome.wustl.edu	37	10	121259626	121259626	+	Nonstop_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	10	121259626	121259626	C	A	SNP	RGS10	ENST00000369103	human	ensembl	74_37	-1	known	nonstop	c.545	p.*182L	1.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS10	HGNC	ENSG00000148908	tier1	-	-	116	0	0.00	72	42	36.84
ROBO1	0	genome.wustl.edu	37	3	78735027	78735027	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	3	78735027	78735027	C	A	SNP	ROBO1	ENST00000464233	human	ensembl	74_37	-1	known	missense	c.1211	p.R404L	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO1	HGNC	ENSG00000169855	tier1	-	-	16	0	0.00	4	6	60.00
ROBO2	0	genome.wustl.edu	37	3	77623728	77623728	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	3	77623728	77623728	T	C	SNP	ROBO2	ENST00000461745	human	ensembl	74_37	+1	known	missense	c.2050	p.W684R	0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008	tier1	-	-	90	0	0.00	39	33	45.83
RPTOR	0	genome.wustl.edu	37	17	78704480	78704480	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	78704480	78704480	G	A	SNP	RPTOR	ENST00000306801	human	ensembl	74_37	+1	known	missense	c.628	p.A210T	0.995	NULL	pfam_HEAT,pfam_WD40_repeat,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Raptor	-	no_errors	RPTOR	HGNC	ENSG00000141564	tier1	-	-	79	0	0.00	55	11	16.42
RUFY2	0	genome.wustl.edu	37	10	70156583	70156583	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	10	70156583	70156583	T	-	DEL	RUFY2	ENST00000388768	human	ensembl	74_37	-1	known	frame_shift_del	c.457	p.M153fs	0.996	pfam_Run,smart_Run,pfscan_Run	pfam_Run,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Run,smart_Znf_FYVE,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	RUFY2	HGNC	ENSG00000204130	tier1			54	0	0.00	57	8	12.31
SACS	0	genome.wustl.edu	37	13	23904755	23904755	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	13	23904755	23904755	G	A	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	silent	c.13260	p.C4420	0.741	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	137	0	0.00	70	43	38.05
SAMD9L	0	genome.wustl.edu	37	7	92761763	92761764	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	92761763	92761764	-	T	INS	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	frame_shift_ins	c.3522_3521	p.N1174fs	0.096:0.120	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409	tier1			296	0	0.00	275	77	21.88
SCAF1	0	genome.wustl.edu	37	19	50158041	50158042	+	Frame_Shift_Ins	INS	-	-	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	50158041	50158042	-	C	INS	SCAF1	ENST00000360565	human	ensembl	74_37	+1	known	frame_shift_ins	c.3532_3533	p.T1181fs	0.839:0.934	NULL	NULL	-	no_errors	SCAF1	HGNC	ENSG00000126461	tier1			44	0	0.00	27	3	10.00
SCO2	0	genome.wustl.edu	37	22	50962558	50962558	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	22	50962558	50962558	G	A	SNP	SCO2	ENST00000252785	human	ensembl	74_37	-1	known	missense	c.283	p.R95C	0.970	pfam_SCO1/SenC,pirsf_Synth_of_cyt-c-oxidase_Sco1/2	pfam_SCO1/SenC,superfamily_Thioredoxin-like_fold,pirsf_Synth_of_cyt-c-oxidase_Sco1/2	-	no_errors	SCO2	HGNC	ENSG00000130489	tier1	-	-	53	0	0.00	15	11	42.31
SEMA3D	0	genome.wustl.edu	37	7	84751204	84751204	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	84751204	84751204	T	G	SNP	SEMA3D	ENST00000284136	human	ensembl	74_37	-1	known	missense	c.4	p.N2H	0.997	NULL	pfam_Semap_dom,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3D	HGNC	ENSG00000153993	tier1	-	-	42	0	0.00	36	7	16.28
SEMA3D	0	genome.wustl.edu	37	7	84751205	84751205	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	84751205	84751205	C	G	SNP	SEMA3D	ENST00000284136	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	1.000	NULL	pfam_Semap_dom,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3D	HGNC	ENSG00000153993	tier1	-	-	41	0	0.00	36	8	18.18
SFRP4	0	genome.wustl.edu	37	7	37955825	37955825	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	37955825	37955825	G	A	SNP	SFRP4	ENST00000436072	human	ensembl	74_37	-1	known	silent	c.315	p.R105	1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled_dom,pfam_Netrin_module_non-TIMP,superfamily_Frizzled_dom,superfamily_TIMP-like_OB-fold,smart_Frizzled_dom,smart_Netrin_module_non-TIMP,pfscan_Frizzled_dom,pfscan_Netrin_domain	-	no_errors	SFRP4	HGNC	ENSG00000106483				41	0	0.00	32	3	8.57
SLC22A23	0	genome.wustl.edu	37	6	3298380	3298380	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	3298380	3298380	G	A	SNP	SLC22A23	ENST00000406686	human	ensembl	74_37	-1	known	silent	c.1155	p.H385	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A23	HGNC	ENSG00000137266	tier1	-	-	112	0	0.00	81	14	14.74
SLC7A4	0	genome.wustl.edu	37	22	21384181	21384181	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	22	21384181	21384181	G	A	SNP	SLC7A4	ENST00000382932	human	ensembl	74_37	-1	known	missense	c.1442	p.A481V	0.963	pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A4	HGNC	ENSG00000099960	tier1	-	-	33	0	0.00	22	6	21.43
SLCO1C1	0	genome.wustl.edu	37	12	20905343	20905343	+	Missense_Mutation	SNP	A	A	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	12	20905343	20905343	A	C	SNP	SLCO1C1	ENST00000381552	human	ensembl	74_37	+1	known	missense	c.2123	p.K708T	0.201	NULL	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO1C1	HGNC	ENSG00000139155	tier1	-	-	36	0	0.00	27	6	18.18
SMARCA4	0	genome.wustl.edu	37	19	11132513	11132513	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	11132513	11132513	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.2729	p.T910M	0.999	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	48	0	0.00	14	7	33.33
SMC1B	0	genome.wustl.edu	37	22	45755829	45755829	+	Silent	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	22	45755829	45755829	C	A	SNP	SMC1B	ENST00000357450	human	ensembl	74_37	-1	known	silent	c.2718	p.G906	0.093	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase,superfamily_t-SNARE	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_t-SNARE,smart_SMC_hinge	-	no_errors	SMC1B	HGNC	ENSG00000077935	tier1	-	-	64	0	0.00	27	10	27.03
SPTBN2	0	genome.wustl.edu	37	11	66456566	66456566	+	Splice_Site	DEL	C	C	-			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	11	66456566	66456566	C	-	DEL	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	splice_site_del	c.6034+1	e28+1	1.000	-	-	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1			33	0	0.00	10	2	16.67
SPTBN4	0	genome.wustl.edu	37	19	41062937	41062937	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	41062937	41062937	G	A	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	silent	c.5298	p.Q1766	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460	tier1	-	-	47	0	0.00	21	15	41.67
STIL	0	genome.wustl.edu	37	1	47746465	47746465	+	Silent	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	1	47746465	47746465	G	A	SNP	STIL	ENST00000371877	human	ensembl	74_37	-1	known	silent	c.1665	p.P555	0.001	NULL	NULL	-	no_errors	STIL	HGNC	ENSG00000123473	tier1	-	-	154	0	0.00	96	20	17.24
TAF8	0	genome.wustl.edu	37	6	42036293	42036293	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	6	42036293	42036293	C	T	SNP	TAF8	ENST00000372982	human	ensembl	74_37	+1	known	missense	c.728	p.S243L	1.000	NULL	pfam_BTP,pfam_TFIID_su8_C,superfamily_Histone-fold,smart_BTP	-	no_errors	TAF8	HGNC	ENSG00000137413	tier1	-	-	143	0	0.00	103	19	15.57
TBC1D29	0	genome.wustl.edu	37	17	28890361	28890361	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	28890361	28890361	G	A	SNP	TBC1D29	ENST00000579181	human	ensembl	74_37	+1	known	missense	c.371	p.R124Q	0.562	NULL	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D29	HGNC	ENSG00000266733				34	0	0.00	31	6	16.22
TCEB3B	0	genome.wustl.edu	37	18	44560270	44560270	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	18	44560270	44560270	T	C	SNP	TCEB3B	ENST00000332567	human	ensembl	74_37	-1	known	missense	c.1366	p.S456G	0.000	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3B	HGNC	ENSG00000206181	tier1	-	-	135	0	0.00	46	27	36.99
TEX11	0	genome.wustl.edu	37	X	69849512	69849512	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	69849512	69849512	C	T	SNP	TEX11	ENST00000344304	human	ensembl	74_37	-1	known	silent	c.1602	p.E534	0.000	NULL	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	-	no_errors	TEX11	HGNC	ENSG00000120498	tier1	-	-	104	0	0.00	41	25	37.88
TMEM184A	0	genome.wustl.edu	37	7	1589551	1589551	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	7	1589551	1589551	C	T	SNP	TMEM184A	ENST00000297477	human	ensembl	74_37	-1	known	missense	c.583	p.V195I	0.068	pfam_Ost-alpha	pfam_Ost-alpha	-	no_errors	TMEM184A	HGNC	ENSG00000164855	tier1	-	-	74	0	0.00	39	10	20.41
TP53	0	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	17	7578406	7578406	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.524	p.R175H	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934578	-	74	0	0.00	43	27	38.57
TRIM3	0	genome.wustl.edu	37	11	6478936	6478936	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	11	6478936	6478936	C	T	SNP	TRIM3	ENST00000345851	human	ensembl	74_37	-1	known	missense	c.505	p.V169M	0.993	smart_Bbox_C	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM3	HGNC	ENSG00000110171	tier1	-	-	88	0	0.00	44	21	32.31
TRPA1	0	genome.wustl.edu	37	8	72964909	72964909	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	8	72964909	72964909	T	C	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	missense	c.1736	p.Q579R	0.466	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1	-	-	101	0	0.00	60	26	30.23
TRPC6	0	genome.wustl.edu	37	11	101347234	101347234	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	11	101347234	101347234	C	G	SNP	TRPC6	ENST00000344327	human	ensembl	74_37	-1	known	missense	c.1542	p.W514C	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC6_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC6	HGNC	ENSG00000137672	tier1	-	-	77	0	0.00	27	17	38.64
TRPV4	0	genome.wustl.edu	37	12	110238465	110238465	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	12	110238465	110238465	G	A	SNP	TRPV4	ENST00000261740	human	ensembl	74_37	-1	known	missense	c.811	p.R271C	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,prints_TRPV4_channel,tigrfam_TRP_channel	-	no_errors	TRPV4	HGNC	ENSG00000111199	tier1	-	-	56	0	0.00	27	6	17.65
UBQLN2	0	genome.wustl.edu	37	X	56590796	56590796	+	Missense_Mutation	SNP	T	T	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	X	56590796	56590796	T	G	SNP	UBQLN2	ENST00000338222	human	ensembl	74_37	+1	known	missense	c.490	p.F164V	1.000	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN2	HGNC	ENSG00000188021	tier1	-	-	41	0	0.00	30	8	21.05
VCPKMT	0	genome.wustl.edu	37	14	50583203	50583203	+	Missense_Mutation	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	14	50583203	50583203	C	T	SNP	VCPKMT	ENST00000395860	human	ensembl	74_37	-1	known	missense	c.68	p.R23Q	0.993	pfam_Nicotinamide_N-MeTfrase-like	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	VCPKMT	HGNC	ENSG00000100483	tier1	-	-	30	0	0.00	19	13	40.62
WASH3P	0	genome.wustl.edu	37	15	102515257	102515257	+	RNA	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	15	102515257	102515257	C	T	SNP	WASH3P	ENST00000557932	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596	tier1	rs74969461	-	10	0	0.00	2	6	75.00
WDR49	0	genome.wustl.edu	37	3	167217995	167217995	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	3	167217995	167217995	T	C	SNP	WDR49	ENST00000308378	human	ensembl	74_37	-1	known	missense	c.1921	p.K641E	0.042	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR49	HGNC	ENSG00000174776	tier1	-	-	221	0	0.00	177	65	26.86
XPO1	0	genome.wustl.edu	37	2	61726050	61726051	+	Splice_Site	INS	-	-	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	61726050	61726051	-	A	INS	XPO1	ENST00000401558	human	ensembl	74_37	-1	known	splice_site_ins	c.591-3_591-2	e7-2	1.000:0.996	-	-	-	no_errors	XPO1	HGNC	ENSG00000082898	tier1			33	0	0.00	17	3	15.00
ZAP70	0	genome.wustl.edu	37	2	98340791	98340791	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	98340791	98340791	C	T	SNP	ZAP70	ENST00000264972	human	ensembl	74_37	+1	known	silent	c.292	p.L98	0.995	pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ZAP70	HGNC	ENSG00000115085				15	0	0.00	23	3	11.54
ZFHX4	0	genome.wustl.edu	37	8	77775831	77775831	+	Missense_Mutation	SNP	A	A	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	8	77775831	77775831	A	G	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.9881	p.E3294G	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	39	0	0.00	26	10	27.78
ZFP30	0	genome.wustl.edu	37	19	38135593	38135593	+	Silent	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	38135593	38135593	T	C	SNP	ZFP30	ENST00000351218	human	ensembl	74_37	-1	known	silent	c.54	p.E18	1.000	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP30	HGNC	ENSG00000120784	tier1	-	-	96	0	0.00	59	18	23.38
ZHX2	0	genome.wustl.edu	37	8	123965100	123965100	+	Missense_Mutation	SNP	G	G	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	8	123965100	123965100	G	C	SNP	ZHX2	ENST00000314393	human	ensembl	74_37	+1	known	missense	c.1350	p.Q450H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX2	HGNC	ENSG00000178764	tier1	-	-	44	0	0.00	38	12	24.00
ZIC5	0	genome.wustl.edu	37	13	100617631	100617631	+	Silent	SNP	C	C	T			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	13	100617631	100617631	C	T	SNP	ZIC5	ENST00000267294	human	ensembl	74_37	-1	known	silent	c.1992	p.*664	0.997	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC5	HGNC	ENSG00000139800				58	0	0.00	38	9	18.75
ZNF570	0	genome.wustl.edu	37	19	37975705	37975705	+	Missense_Mutation	SNP	C	C	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	37975705	37975705	C	A	SNP	ZNF570	ENST00000330173	human	ensembl	74_37	+1	known	missense	c.1181	p.A394D	0.983	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF570	HGNC	ENSG00000171827	tier1	-	-	103	0	0.00	42	21	33.33
ZNF573	0	genome.wustl.edu	37	19	38230682	38230682	+	Missense_Mutation	SNP	C	C	G			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	19	38230682	38230682	C	G	SNP	ZNF573	ENST00000590414	human	ensembl	74_37	-1	known	missense	c.709	p.E237Q	0.998	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF573	HGNC	ENSG00000189144	tier1	-	-	135	0	0.00	79	27	25.47
ZNF595	0	genome.wustl.edu	37	4	53210	53210	+	RNA	SNP	G	G	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	4	53210	53210	G	C	SNP	ZNF595	ENST00000339368	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	ZNF595	HGNC	ENSG00000197701	tier1	-	-	41	0	0.00	27	4	12.90
ZRANB3	0	genome.wustl.edu	37	2	136111101	136111101	+	Missense_Mutation	SNP	G	G	A			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	2	136111101	136111101	G	A	SNP	ZRANB3	ENST00000264159	human	ensembl	74_37	-1	known	missense	c.278	p.P93L	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_HNH,pfam_Znf_RanBP2,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Znf_RanBP2,smart_HNH_nuc,pfscan_Znf_RanBP2,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ZRANB3	HGNC	ENSG00000121988	tier1	-	-	37	0	0.00	36	9	20.00
ZSCAN32	0	genome.wustl.edu	37	16	3433705	3433705	+	Missense_Mutation	SNP	T	T	C			TCGA-IN-A7NT-01A-21D-A34U-08	TCGA-IN-A7NT-10A-01D-A34X-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9c7ea2ee-4472-4900-99f3-e17f3f7876d5	c7a887b2-e8ce-487e-813b-fb9f1fe36362	16	3433705	3433705	T	C	SNP	ZSCAN32	ENST00000396846	human	ensembl	74_37	-1	known	missense	c.1241	p.E414G	0.896	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN32	HGNC	ENSG00000140987	tier1	-	-	71	0	0.00	41	25	37.88
