Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCB1	0	genome.wustl.edu	37	7	87225104	87225104	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	87225104	87225104	G	T	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.95	p.P32Q	1.000	superfamily_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563	tier1	-	-	91	0	0.00	85	7	7.61
ADAM21P1	0	genome.wustl.edu	37	14	70713986	70713986	+	RNA	DEL	C	C	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	14	70713986	70713986	C	-	DEL	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.553	-	-	-	no_errors	ADAM21P1	HGNC	ENSG00000235812	tier1			131	0	0.00	108	11	9.24
AFF2	0	genome.wustl.edu	37	X	148044423	148044423	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	148044423	148044423	A	C	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.2869	p.T957P	0.899	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966	tier1	-	-	93	0	0.00	43	32	42.67
AGAP3	0	genome.wustl.edu	37	7	150835321	150835321	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	150835321	150835321	C	A	SNP	AGAP3	ENST00000397238	human	ensembl	74_37	+1	known	missense	c.1587	p.H529Q	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP3	HGNC	ENSG00000133612	tier1	-	-	56	0	0.00	47	11	18.97
AGBL1	0	genome.wustl.edu	37	15	86807659	86807659	+	Silent	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	86807659	86807659	G	T	SNP	AGBL1	ENST00000441037	human	ensembl	74_37	+1	known	silent	c.1119	p.V373	0.921	superfamily_ARM-type_fold	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGBL1	HGNC	ENSG00000166748	tier1	-	-	47	0	0.00	57	9	13.64
AGMAT	0	genome.wustl.edu	37	1	15911273	15911273	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	15911273	15911273	C	A	SNP	AGMAT	ENST00000375826	human	ensembl	74_37	-1	known	missense	c.190	p.V64L	0.041	NULL	pfam_Ureohydrolase,prints_Ureohydrolase,tigrfam_Agmatinase-rel	-	no_errors	AGMAT	HGNC	ENSG00000116771	tier1	-	-	10	0	0.00	10	5	33.33
ANKRD30BL	0	genome.wustl.edu	37	2	133015299	133015299	+	RNA	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	133015299	133015299	C	T	SNP	ANKRD30BL	ENST00000470729	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	ANKRD30BL	HGNC	ENSG00000163046	tier1	rs79554046	-	13	0	0.00	9	7	43.75
ANKRD30BL	0	genome.wustl.edu	37	2	133015314	133015314	+	RNA	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	133015314	133015314	G	A	SNP	ANKRD30BL	ENST00000470729	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.071	-	-	-	no_errors	ANKRD30BL	HGNC	ENSG00000163046	tier1	rs112315337	-	9	0	0.00	8	7	46.67
ANKRD30BL	0	genome.wustl.edu	37	2	133015325	133015325	+	RNA	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	133015325	133015325	G	A	SNP	ANKRD30BL	ENST00000470729	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.126	-	-	-	no_errors	ANKRD30BL	HGNC	ENSG00000163046	tier1	rs111401445	-	11	0	0.00	10	5	33.33
ARAF	0	genome.wustl.edu	37	X	47429312	47429312	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	47429312	47429312	G	T	SNP	ARAF	ENST00000377045	human	ensembl	74_37	+1	known	missense	c.1440	p.M480I	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	ARAF	HGNC	ENSG00000078061				34	0	0.00	10	3	23.08
ARAF	0	genome.wustl.edu	37	X	47429313	47429313	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	47429313	47429313	C	T	SNP	ARAF	ENST00000377045	human	ensembl	74_37	+1	known	nonsense	c.1441	p.Q481*	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	ARAF	HGNC	ENSG00000078061				34	0	0.00	9	3	25.00
ARID1A	0	genome.wustl.edu	37	1	27058048	27058048	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	27058048	27058048	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	nonsense	c.1756	p.Q586*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	tier1	-	-	370	0	0.00	130	104	44.44
ARMC4	0	genome.wustl.edu	37	10	28270418	28270418	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	10	28270418	28270418	A	C	SNP	ARMC4	ENST00000305242	human	ensembl	74_37	-1	known	missense	c.913	p.F305V	0.991	superfamily_GSKIP_dom	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_GSKIP_dom,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC4	HGNC	ENSG00000169126	tier1	-	-	104	0	0.00	80	13	13.83
ATM	0	genome.wustl.edu	37	11	108196196	108196196	+	Silent	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	108196196	108196196	A	G	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	silent	c.6732	p.R2244	0.620	pfam_PIK-rel_kinase_FAT,superfamily_ARM-type_fold,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	tier1	-	-	128	0	0.00	97	7	6.73
BPIFB2	0	genome.wustl.edu	37	20	31606879	31606879	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	20	31606879	31606879	C	A	SNP	BPIFB2	ENST00000170150	human	ensembl	74_37	+1	known	missense	c.867	p.D289E	0.948	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB2	HGNC	ENSG00000078898	tier1	-	-	207	0	0.00	157	49	23.79
C2orf78	0	genome.wustl.edu	37	2	74043291	74043291	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	74043291	74043291	A	C	SNP	C2orf78	ENST00000409561	human	ensembl	74_37	+1	novel	missense	c.1941	p.K647N	0.000	NULL	NULL	-	no_errors	C2orf78	HGNC	ENSG00000187833	tier1	-	-	94	0	0.00	61	35	36.46
C4orf26	0	genome.wustl.edu	37	4	76489417	76489417	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	4	76489417	76489417	C	T	SNP	C4orf26	ENST00000435974	human	ensembl	74_37	+1	putative	nonsense	c.205	p.R69*	0.036	NULL	NULL	-	no_errors	C4orf26	HGNC	ENSG00000174792	tier1	-	-	181	0	0.00	146	22	13.10
CDYL	0	genome.wustl.edu	37	6	4716083	4716083	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	4716083	4716083	C	A	SNP	CDYL	ENST00000328908	human	ensembl	74_37	+1	known	missense	c.71	p.P24Q	0.000	NULL	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046	tier1	-	-	66	0	0.00	49	5	9.26
CDYL	0	genome.wustl.edu	37	6	4952584	4952584	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	4952584	4952584	G	A	SNP	CDYL	ENST00000328908	human	ensembl	74_37	+1	known	missense	c.1579	p.G527R	0.999	NULL	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046	tier1	-	-	123	0	0.00	66	45	40.18
CHD9	0	genome.wustl.edu	37	16	53190619	53190619	+	Silent	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	53190619	53190619	T	C	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	silent	c.618	p.H206	0.877	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	tier1	-	-	258	0	0.00	138	79	36.41
CHRM3	0	genome.wustl.edu	37	1	240071671	240071671	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	240071671	240071671	A	C	SNP	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	missense	c.920	p.K307T	0.945	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019	tier1	-	-	76	0	0.00	69	31	31.00
CNTN6	0	genome.wustl.edu	37	3	1337472	1337472	+	Silent	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	1337472	1337472	A	G	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	silent	c.642	p.L214	0.608	smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	68	0	0.00	48	7	12.73
COL27A1	0	genome.wustl.edu	37	9	117062896	117062896	+	RNA	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	117062896	117062896	C	T	SNP	COL27A1	ENST00000494780	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	COL27A1	HGNC	ENSG00000196739	tier1	-	-	59	0	0.00	56	5	8.20
CSGALNACT1	0	genome.wustl.edu	37	8	19362917	19362917	+	Nonsense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	19362917	19362917	A	T	SNP	CSGALNACT1	ENST00000311540	human	ensembl	74_37	-1	known	nonsense	c.429	p.Y143*	0.261	NULL	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408	tier1	-	-	120	0	0.00	135	18	11.76
CTAGE1	0	genome.wustl.edu	37	18	19995825	19995825	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	18	19995825	19995825	G	A	SNP	CTAGE1	ENST00000391403	human	ensembl	74_37	-1	known	silent	c.1950	p.P650	0.390	NULL	NULL	-	no_errors	CTAGE1	HGNC	ENSG00000212710	tier1	-	-	385	0	0.00	572	137	19.27
CTH	0	genome.wustl.edu	37	1	70899633	70899633	+	Splice_Site	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	70899633	70899633	G	T	SNP	CTH	ENST00000370938	human	ensembl	74_37	+1	known	splice_site	c.999+1	e9+1	1.000	-	-	-	no_errors	CTH	HGNC	ENSG00000116761	tier1	-	-	58	0	0.00	52	17	24.64
CYP11B1	0	genome.wustl.edu	37	8	143961062	143961062	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	143961062	143961062	C	G	SNP	CYP11B1	ENST00000292427	human	ensembl	74_37	-1	known	missense	c.168	p.W56C	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP11B1	HGNC	ENSG00000160882	tier1	-	-	106	0	0.00	94	30	24.19
DMD	0	genome.wustl.edu	37	X	32591740	32591740	+	Silent	SNP	T	T	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	32591740	32591740	T	G	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	silent	c.1719	p.A573	0.125	smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	133	0	0.00	80	5	5.88
DUOXA2	0	genome.wustl.edu	37	15	45408874	45408874	+	Silent	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	45408874	45408874	C	T	SNP	DUOXA2	ENST00000323030	human	ensembl	74_37	+1	known	silent	c.501	p.C167	0.996	pfam_Dual_oxidase_maturation_fac	pfam_Dual_oxidase_maturation_fac	-	no_errors	DUOXA2	HGNC	ENSG00000140274	tier1	-	-	91	0	0.00	77	19	19.79
DZIP1L	0	genome.wustl.edu	37	3	137781750	137781750	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	137781750	137781750	C	G	SNP	DZIP1L	ENST00000327532	human	ensembl	74_37	-1	known	missense	c.2212	p.E738Q	0.005	NULL	pfscan_Znf_C2H2	-	no_errors	DZIP1L	HGNC	ENSG00000158163	tier1	-	-	119	0	0.00	88	12	11.88
ENSG00000161103	0	genome.wustl.edu	37	22	18842337	18842337	+	RNA	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	22	18842337	18842337	G	A	SNP	ENSG00000161103	ENST00000416498	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103	tier1	-	-	14	0	0.00	4	3	42.86
ENSG00000225411	0	genome.wustl.edu	37	9	68400239	68400239	+	RNA	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	68400239	68400239	C	A	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	rs113560765	-	18	0	0.00	13	4	23.53
ENSG00000234232	0	genome.wustl.edu	37	1	149719221	149719221	+	RNA	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	149719221	149719221	G	C	SNP	ENSG00000234232	ENST00000608683	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-353N4.5	Clone_based_vega_gene	ENSG00000234232	tier1	rs633047	-	9	0	0.00	2	4	66.67
ENSG00000263854	0	genome.wustl.edu	37	GL000224.1	47283	47283	+	RNA	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	GL000224.1	47283	47283	T	C	SNP	ENSG00000263854	ENST00000584224	human	ensembl	74_37	+1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors	AL591856.5	Clone_based_ensembl_gene	ENSG00000263854	tier1	-	-	13	0	0.00	3	4	57.14
ETNPPL	0	genome.wustl.edu	37	4	109664983	109664983	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	4	109664983	109664983	C	T	SNP	ETNPPL	ENST00000296486	human	ensembl	74_37	-1	known	missense	c.1333	p.E445K	0.000	NULL	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	-	no_errors	ETNPPL	HGNC	ENSG00000164089	tier1	-	-	123	0	0.00	99	17	14.66
EZH1	0	genome.wustl.edu	37	17	40871153	40871153	+	Missense_Mutation	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	40871153	40871153	T	C	SNP	EZH1	ENST00000428826	human	ensembl	74_37	-1	known	missense	c.737	p.E246G	1.000	smart_SANT/Myb	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH1	HGNC	ENSG00000108799	tier1	-	-	344	0	0.00	390	36	8.45
FAM111B	0	genome.wustl.edu	37	11	58892180	58892180	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	58892180	58892180	C	A	SNP	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	missense	c.610	p.L204I	0.218	NULL	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057	tier1	-	-	104	0	0.00	111	6	5.13
FAM230C	0	genome.wustl.edu	37	22	21663552	21663552	+	RNA	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	22	21663552	21663552	G	A	SNP	FAM230C	ENST00000436681	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.187	-	-	-	no_errors	KB-1183D5.13	Clone_based_vega_gene	ENSG00000206142	tier1	rs62236681	-	11	0	0.00	3	5	62.50
FLNB	0	genome.wustl.edu	37	3	58111404	58111404	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	58111404	58111404	A	T	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.3995	p.Q1332L	0.019	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068	tier1	-	-	166	0	0.00	138	12	8.00
FOXP2	0	genome.wustl.edu	37	7	114282671	114282671	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	114282671	114282671	C	T	SNP	FOXP2	ENST00000408937	human	ensembl	74_37	+1	known	nonsense	c.1057	p.R353*	0.961	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP2	HGNC	ENSG00000128573	tier1	rs121908378	-	134	0	0.00	124	10	7.41
GAPDH	0	genome.wustl.edu	37	12	6646855	6646855	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	12	6646855	6646855	A	G	SNP	GAPDH	ENST00000229239	human	ensembl	74_37	+1	known	missense	c.631	p.T211A	0.998	pfam_GlycerAld_3-P_DH_cat,pirsf_GlycerAld/Erythrose_P_DH,tigrfam_Glyceraldehyde-3-P_DH_1	pfam_GlycerAld_3-P_DH_cat,pfam_GlycerAld_3-P_DH_NAD(P)-bd,smart_GlycerAld_3-P_DH_NAD(P)-bd,pirsf_GlycerAld/Erythrose_P_DH,prints_GlycerAld/Erythrose_P_DH,tigrfam_Glyceraldehyde-3-P_DH_1	-	no_errors	GAPDH	HGNC	ENSG00000111640	tier1	-	-	74	0	0.00	56	20	25.97
GAS2	0	genome.wustl.edu	37	11	22770786	22770786	+	Silent	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	22770786	22770786	A	G	SNP	GAS2	ENST00000278187	human	ensembl	74_37	+1	known	silent	c.594	p.T198	0.990	NULL	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2	HGNC	ENSG00000148935	tier1	-	-	113	0	0.00	81	6	6.90
GAS5	0	genome.wustl.edu	37	1	173833335	173833335	+	RNA	SNP	T	T	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	173833335	173833335	T	A	SNP	GAS5	ENST00000363840	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	GAS5	HGNC	ENSG00000234741	tier1	-	-	57	0	0.00	62	20	24.39
GRID2	0	genome.wustl.edu	37	4	93225752	93225753	+	RNA	INS	-	-	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	4	93225752	93225753	-	A	INS	GRID2	ENST00000505687	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	GRID2	HGNC	ENSG00000152208	tier1			28	0	0.00	19	2	9.52
GRIPAP1	0	genome.wustl.edu	37	X	48839839	48839839	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	48839839	48839839	C	T	SNP	GRIPAP1	ENST00000376441	human	ensembl	74_37	-1	known	missense	c.1286	p.R429Q	1.000	NULL	superfamily_Prefoldin	-	no_errors	GRIPAP1	HGNC	ENSG00000068400	tier1	-	-	151	0	0.00	101	6	5.61
HBEGF	0	genome.wustl.edu	37	5	139725639	139725639	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	139725639	139725639	A	C	SNP	HBEGF	ENST00000230990	human	ensembl	74_37	-1	known	missense	c.77	p.L26R	0.995	NULL	pfscan_EG-like_dom	-	no_errors	HBEGF	HGNC	ENSG00000113070	tier1	-	-	53	0	0.00	29	11	27.50
HIPK3	0	genome.wustl.edu	37	11	33360383	33360383	+	Silent	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	33360383	33360383	A	T	SNP	HIPK3	ENST00000303296	human	ensembl	74_37	+1	known	silent	c.1422	p.V474	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK3	HGNC	ENSG00000110422	tier1	-	-	150	0	0.00	112	6	5.08
HK3	0	genome.wustl.edu	37	5	176314297	176314297	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	176314297	176314297	A	G	SNP	HK3	ENST00000292432	human	ensembl	74_37	-1	known	missense	c.1642	p.F548L	1.000	pfam_Hexokinase_N,prints_Hexokinase	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK3	HGNC	ENSG00000160883	tier1	-	-	112	0	0.00	66	8	10.81
HPR	0	genome.wustl.edu	37	16	72110570	72110570	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	72110570	72110570	A	G	SNP	HPR	ENST00000228226	human	ensembl	74_37	+1	known	missense	c.748	p.N250D	0.949	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	HPR	HGNC	ENSG00000261701	tier1	-	-	157	0	0.00	73	57	43.85
IL20RB	0	genome.wustl.edu	37	3	136714377	136714377	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	136714377	136714377	G	A	SNP	IL20RB	ENST00000329582	human	ensembl	74_37	+1	known	silent	c.804	p.V268	0.005	NULL	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL20RB	HGNC	ENSG00000174564	tier1	-	-	510	0	0.00	508	50	8.96
IMMP2L	0	genome.wustl.edu	37	7	110303717	110303717	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	110303717	110303717	G	T	SNP	IMMP2L	ENST00000331762	human	ensembl	74_37	-1	known	missense	c.469	p.Q157K	1.000	superfamily_Peptidase_S24_S26A/B/C	pfam_Peptidase_S24_S26,superfamily_Peptidase_S24_S26A/B/C,prints_Pept_S26A_signal_pept_1,tigrfam_Pept_S26A_signal_pept_1	-	no_errors	IMMP2L	HGNC	ENSG00000184903	tier1	-	-	121	0	0.00	118	11	8.46
KCNH5	0	genome.wustl.edu	37	14	63174581	63174581	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	14	63174581	63174581	C	T	SNP	KCNH5	ENST00000322893	human	ensembl	74_37	-1	known	missense	c.2612	p.S871N	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH5	HGNC	ENSG00000140015	tier1	-	-	145	0	0.00	149	18	10.71
KIFAP3	0	genome.wustl.edu	37	1	169952006	169952006	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	169952006	169952006	A	T	SNP	KIFAP3	ENST00000361580	human	ensembl	74_37	-1	known	missense	c.1509	p.D503E	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	KIFAP3	HGNC	ENSG00000075945	tier1	-	-	59	0	0.00	47	31	39.74
KLHL41	0	genome.wustl.edu	37	2	170371206	170371206	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	170371206	170371206	G	T	SNP	KLHL41	ENST00000284669	human	ensembl	74_37	+1	known	missense	c.1233	p.E411D	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL41	HGNC	ENSG00000239474	tier1	-	-	164	0	0.00	169	16	8.65
KRT79	0	genome.wustl.edu	37	12	53225274	53225274	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	12	53225274	53225274	G	A	SNP	KRT79	ENST00000330553	human	ensembl	74_37	-1	known	missense	c.614	p.T205M	0.992	pfam_IF,superfamily_STAT_TF_coiled-coil	pfam_IF,superfamily_STAT_TF_coiled-coil,prints_Keratin_II	-	no_errors	KRT79	HGNC	ENSG00000185640	tier1	rs149430221	-	208	0	0.00	133	69	34.16
LIMK1	0	genome.wustl.edu	37	7	73534914	73534914	+	Silent	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	73534914	73534914	C	T	SNP	LIMK1	ENST00000336180	human	ensembl	74_37	+1	known	silent	c.1569	p.G523	0.988	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Znf_LIM,pfam_PDZ,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK1	HGNC	ENSG00000106683	tier1	-	-	138	0	0.00	157	12	7.10
LINGO2	0	genome.wustl.edu	37	9	27949053	27949053	+	Silent	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	27949053	27949053	T	C	SNP	LINGO2	ENST00000308675	human	ensembl	74_37	-1	known	silent	c.1617	p.K539	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO2	HGNC	ENSG00000174482	tier1	-	-	176	0	0.00	130	15	10.34
LONRF2	0	genome.wustl.edu	37	2	100938521	100938523	+	In_Frame_Del	DEL	GGC	GGC	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	GGC	GGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	100938521	100938523	GGC	-	DEL	LONRF2	ENST00000393437	human	ensembl	74_37	-1	known	in_frame_del	c.35_33	p.P12in_frame_del	0.077:0.087:0.087	NULL	pfam_Pept_S16_N,pfam_Znf_C3HC4_RING-type,superfamily_PUA-like_domain,smart_Znf_RING,smart_TPR_repeat,smart_Pept_S16_N,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	LONRF2	HGNC	ENSG00000170500	tier1			9	0	0.00	4	2	33.33
MAEL	0	genome.wustl.edu	37	1	166985522	166985522	+	Splice_Site	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	166985522	166985522	G	A	SNP	MAEL	ENST00000367872	human	ensembl	74_37	+1	known	splice_site	c.908+1	e9+1	1.000	-	-	-	no_errors	MAEL	HGNC	ENSG00000143194	tier1	-	-	114	0	0.00	128	15	10.49
MAN2A2	0	genome.wustl.edu	37	15	91461481	91461481	+	Missense_Mutation	SNP	T	T	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	91461481	91461481	T	A	SNP	MAN2A2	ENST00000360468	human	ensembl	74_37	+1	known	missense	c.3052	p.Y1018N	0.859	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2A2	HGNC	ENSG00000196547	tier1	-	-	246	0	0.00	222	16	6.72
MAN2B1	0	genome.wustl.edu	37	19	12767813	12767813	+	Frame_Shift_Del	DEL	A	A	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	12767813	12767813	A	-	DEL	MAN2B1	ENST00000456935	human	ensembl	74_37	-1	known	frame_shift_del	c.1477	p.C493fs	1.000	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B1	HGNC	ENSG00000104774	tier1			44	0	0.00	36	2	5.26
MARCO	0	genome.wustl.edu	37	2	119750742	119750742	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	119750742	119750742	G	T	SNP	MARCO	ENST00000327097	human	ensembl	74_37	+1	known	missense	c.1295	p.R432L	0.791	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	pfam_Collagen,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	MARCO	HGNC	ENSG00000019169	tier1	-	-	188	0	0.00	120	46	27.71
MED13	0	genome.wustl.edu	37	17	60040165	60040165	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	60040165	60040165	A	G	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	missense	c.5012	p.L1671P	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510	tier1	-	-	213	0	0.00	140	44	23.91
MT-ATP6	0	genome.wustl.edu	37	MT	9117	9117	+	Silent	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	MT	9117	9117	T	C	SNP	MT-ATP6	ENST00000361899	human	ensembl	74_37	+1	known	silent	c.591	p.I197	NULL	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	-	no_errors	MT-ATP6	HGNC	ENSG00000198899	tier1	-	-	278	0	0.00	42	268	86.45
MT-ND5	0	genome.wustl.edu	37	MT	12818	12818	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	MT	12818	12818	G	A	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.482	p.R161Q	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	281	0	0.00	87	216	71.29
MT-RNR2	0	genome.wustl.edu	37	MT	2573	2573	+	RNA	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	MT	2573	2573	G	A	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	315	0	0.00	176	85	32.44
MTIF2	0	genome.wustl.edu	37	2	55464532	55464532	+	Missense_Mutation	SNP	T	T	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	55464532	55464532	T	G	SNP	MTIF2	ENST00000263629	human	ensembl	74_37	-1	known	missense	c.1903	p.T635P	1.000	superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,pfam_GTP_binding_domain,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,superfamily_TIF_IF2_dom3,superfamily_Transl_B-barrel,tigrfam_Small_GTP-bd_dom	-	no_errors	MTIF2	HGNC	ENSG00000085760	tier1	-	-	93	0	0.00	69	7	9.21
MTMR6	0	genome.wustl.edu	37	13	25826019	25826019	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	13	25826019	25826019	C	T	SNP	MTMR6	ENST00000381801	human	ensembl	74_37	-1	known	missense	c.1450	p.E484K	1.000	NULL	pfam_Myotubularin-like_Pase_dom,smart_Tyr_Pase_cat	-	no_errors	MTMR6	HGNC	ENSG00000139505	tier1	-	-	221	0	0.00	202	30	12.93
MUC16	0	genome.wustl.edu	37	19	9010666	9010666	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	9010666	9010666	A	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.38995	p.S12999P	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	38	0	0.00	21	12	36.36
MVP	0	genome.wustl.edu	37	16	29855978	29855978	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	29855978	29855978	G	A	SNP	MVP	ENST00000357402	human	ensembl	74_37	+1	known	missense	c.1799	p.R600H	1.000	pfam_MVP_shoulder	pfam_Vault_N,pfam_MVP_shoulder	-	no_errors	MVP	HGNC	ENSG00000013364	tier1	-	-	244	0	0.00	168	76	31.15
NCK1	0	genome.wustl.edu	37	3	136646967	136646967	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	136646967	136646967	C	T	SNP	NCK1	ENST00000288986	human	ensembl	74_37	+1	known	nonsense	c.124	p.R42*	0.999	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pirsf_Cytoplasmic_NCK,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_SH2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pirsf_Cytoplasmic_NCK,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	NCK1	HGNC	ENSG00000158092	tier1	-	-	107	0	0.00	98	11	10.09
NEB	0	genome.wustl.edu	37	2	152466520	152466520	+	Silent	SNP	T	T	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	152466520	152466520	T	G	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.12133	p.R4045	0.707	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	69	0	0.00	74	9	10.84
NEFH	0	genome.wustl.edu	37	22	29884965	29884965	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	22	29884965	29884965	G	T	SNP	NEFH	ENST00000310624	human	ensembl	74_37	+1	known	missense	c.1336	p.V446L	0.507	NULL	pfam_IF,pfam_DUF1388	-	no_errors	NEFH	HGNC	ENSG00000100285	tier1	-	-	116	0	0.00	66	14	17.50
NIPBL	0	genome.wustl.edu	37	5	37016190	37016190	+	Missense_Mutation	SNP	T	T	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	37016190	37016190	T	A	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.4694	p.F1565Y	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	-	-	105	0	0.00	69	12	14.81
NPAP1	0	genome.wustl.edu	37	15	24923259	24923259	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	24923259	24923259	C	T	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.2245	p.P749S	0.001	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823	tier1	-	-	318	0	0.00	165	30	15.38
NUP210L	0	genome.wustl.edu	37	1	153991488	153991488	+	Frame_Shift_Del	DEL	G	G	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	153991488	153991488	G	-	DEL	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	frame_shift_del	c.4574	p.T1525fs	0.997	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	tier1			99	0	0.00	102	16	13.56
OR10G4	0	genome.wustl.edu	37	11	123887117	123887117	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	123887117	123887117	C	T	SNP	OR10G4	ENST00000320891	human	ensembl	74_37	+1	known	missense	c.836	p.T279M	0.438	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G4	HGNC	ENSG00000254737	tier1	rs201358968	-	113	0	0.00	94	29	23.58
OR5M3	0	genome.wustl.edu	37	11	56237511	56237511	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	56237511	56237511	G	C	SNP	OR5M3	ENST00000312240	human	ensembl	74_37	-1	known	missense	c.463	p.L155V	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M3	HGNC	ENSG00000174937	tier1	-	-	208	0	0.00	171	16	8.51
PDC	0	genome.wustl.edu	37	1	186413559	186413559	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	186413559	186413559	A	G	SNP	PDC	ENST00000340129	human	ensembl	74_37	-1	known	missense	c.293	p.M98T	1.000	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	-	no_errors	PDC	HGNC	ENSG00000116703	tier1	-	-	187	0	0.00	200	22	9.91
PDE6A	0	genome.wustl.edu	37	5	149247320	149247320	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	149247320	149247320	G	T	SNP	PDE6A	ENST00000255266	human	ensembl	74_37	-1	known	missense	c.2242	p.L748M	1.000	pfam_PDEase_catalytic_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6A	HGNC	ENSG00000132915	tier1	-	-	68	0	0.00	43	15	25.86
PFAS	0	genome.wustl.edu	37	17	8172066	8172066	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	8172066	8172066	G	T	SNP	PFAS	ENST00000314666	human	ensembl	74_37	+1	known	missense	c.3598	p.G1200W	1.000	tigrfam_PRibForGlyAmidine_synth	pfam_AIR_synth_C_dom,pfam_AIR_synth_N_dom,superfamily_PurM_N-like,superfamily_AIR_synth_C_dom,tigrfam_PRibForGlyAmidine_synth	-	no_errors	PFAS	HGNC	ENSG00000178921	tier1	-	-	100	0	0.00	81	13	13.83
PIWIL1	0	genome.wustl.edu	37	12	130856119	130856119	+	Silent	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	12	130856119	130856119	G	T	SNP	PIWIL1	ENST00000245255	human	ensembl	74_37	+1	known	silent	c.2562	p.L854	0.996	superfamily_RNaseH-like_dom	pfam_Piwi,pfam_PAZ_dom,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	tier1	-	-	213	0	0.00	183	15	7.50
PLAG1	0	genome.wustl.edu	37	8	57079437	57079437	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	57079437	57079437	G	A	SNP	PLAG1	ENST00000316981	human	ensembl	74_37	-1	known	missense	c.868	p.L290F	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PLAG1	HGNC	ENSG00000181690	tier1	-	-	296	0	0.00	212	85	28.62
PPIG	0	genome.wustl.edu	37	2	170488304	170488304	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	170488304	170488304	C	G	SNP	PPIG	ENST00000260970	human	ensembl	74_37	+1	known	missense	c.790	p.L264V	1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIG	HGNC	ENSG00000138398	tier1	-	-	171	0	0.00	116	40	25.64
PPM1L	0	genome.wustl.edu	37	3	160786805	160786805	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	160786805	160786805	C	G	SNP	PPM1L	ENST00000498165	human	ensembl	74_37	+1	known	missense	c.943	p.R315G	0.998	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1L	HGNC	ENSG00000163590	tier1	-	-	139	0	0.00	160	16	9.04
PRKCQ	0	genome.wustl.edu	37	10	6472894	6472894	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	10	6472894	6472894	C	T	SNP	PRKCQ	ENST00000263125	human	ensembl	74_37	-1	known	missense	c.1843	p.V615M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Prot_kin_PKC_delta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675	tier1	-	-	79	0	0.00	43	29	40.28
PSRC1	0	genome.wustl.edu	37	1	109823568	109823568	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	109823568	109823568	A	T	SNP	PSRC1	ENST00000409138	human	ensembl	74_37	-1	known	missense	c.825	p.S275R	0.974	NULL	NULL	-	no_errors	PSRC1	HGNC	ENSG00000134222	tier1	-	-	88	0	0.00	51	25	32.89
PTPDC1	0	genome.wustl.edu	37	9	96857666	96857666	+	Silent	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	96857666	96857666	G	T	SNP	PTPDC1	ENST00000375360	human	ensembl	74_37	+1	known	silent	c.522	p.V174	1.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	PTPDC1	HGNC	ENSG00000158079	tier1	-	-	192	0	0.00	212	28	11.67
PTPRC	0	genome.wustl.edu	37	1	198685920	198685920	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	198685920	198685920	G	A	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	silent	c.1401	p.V467	0.000	pirsf_Leukocyte_common_ag,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237	tier1	-	-	80	0	0.00	57	5	8.06
RAPGEF4	0	genome.wustl.edu	37	2	173894949	173894949	+	Silent	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	173894949	173894949	C	T	SNP	RAPGEF4	ENST00000397081	human	ensembl	74_37	+1	known	silent	c.2616	p.N872	0.990	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428	tier1	-	-	100	0	0.00	65	22	25.29
RBMXL1	0	genome.wustl.edu	37	1	89448733	89448733	+	Silent	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	89448733	89448733	G	T	SNP	RBMXL1	ENST00000321792	human	ensembl	74_37	-1	known	silent	c.777	p.G259	1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL1	HGNC	ENSG00000213516	tier1	rs139696847	-	246	0	0.00	275	21	7.09
RRBP1	0	genome.wustl.edu	37	20	17639836	17639836	+	Silent	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	20	17639836	17639836	G	C	SNP	RRBP1	ENST00000246043	human	ensembl	74_37	-1	known	silent	c.1317	p.G439	0.191	NULL	pfam_Rib_rcpt_KP,superfamily_Ribosome_recyc_fac_dom	-	no_errors	RRBP1	HGNC	ENSG00000125844	tier1	-	-	13	0	0.00	4	5	55.56
SAMD9	0	genome.wustl.edu	37	7	92730872	92730872	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	92730872	92730872	C	G	SNP	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	missense	c.4539	p.Q1513H	0.973	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	tier1	-	-	107	0	0.00	98	12	10.91
SDK1	0	genome.wustl.edu	37	7	4285416	4285416	+	Silent	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	4285416	4285416	G	C	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	silent	c.6360	p.S2120	0.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555	tier1	-	-	100	0	0.00	102	9	7.96
SESN3	0	genome.wustl.edu	37	11	94917632	94917633	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	94917632	94917633	TT	-	DEL	SESN3	ENST00000536441	human	ensembl	74_37	-1	known	frame_shift_del	c.889_888	p.L298fs	1.000:0.990	pfam_PA26	pfam_PA26	-	no_errors	SESN3	HGNC	ENSG00000149212	tier1			111	0	0.00	76	10	11.63
SLC44A4	0	genome.wustl.edu	37	6	31833680	31833680	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	31833680	31833680	G	A	SNP	SLC44A4	ENST00000229729	human	ensembl	74_37	-1	known	missense	c.1457	p.P486L	1.000	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A4	HGNC	ENSG00000204385	tier1	-	-	120	0	0.00	137	14	9.27
SLC6A11	0	genome.wustl.edu	37	3	10960116	10960116	+	Silent	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	10960116	10960116	C	A	SNP	SLC6A11	ENST00000254488	human	ensembl	74_37	+1	known	silent	c.1098	p.P366	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,superfamily_S-AdoMet_deCO2ase_core,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT3	-	no_errors	SLC6A11	HGNC	ENSG00000132164	tier1	-	-	84	0	0.00	39	11	22.00
SLITRK1	0	genome.wustl.edu	37	13	84454800	84454800	+	Frame_Shift_Del	DEL	A	A	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	13	84454800	84454800	A	-	DEL	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	frame_shift_del	c.843	p.F281fs	0.995	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235	tier1			83	0	0.00	64	8	11.11
SMAD4	0	genome.wustl.edu	37	18	48591900	48591900	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	18	48591900	48591900	G	T	SNP	SMAD4	ENST00000342988	human	ensembl	74_37	+1	known	missense	c.1063	p.D355Y	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD4	HGNC	ENSG00000141646	tier1	-	-	159	0	0.00	75	40	34.48
SMOC2	0	genome.wustl.edu	37	6	168927117	168927117	+	Silent	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	168927117	168927117	C	T	SNP	SMOC2	ENST00000354536	human	ensembl	74_37	+1	known	silent	c.348	p.D116	0.990	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_EF_hand_dom,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562	tier1	-	-	130	0	0.00	72	6	7.69
SNAI2	0	genome.wustl.edu	37	8	49832582	49832582	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	49832582	49832582	C	A	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	missense	c.498	p.K166N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549	tier1	-	-	117	0	0.00	88	7	7.37
SOX8	0	genome.wustl.edu	37	16	1034859	1034859	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	1034859	1034859	G	A	SNP	SOX8	ENST00000293894	human	ensembl	74_37	+1	known	missense	c.814	p.E272K	1.000	NULL	pfam_HMG_box_dom,pfam_Sox_N,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX8	HGNC	ENSG00000005513	tier1	-	-	80	0	0.00	62	19	23.46
SPARC	0	genome.wustl.edu	37	5	151051233	151051233	+	Nonsense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	151051233	151051233	G	T	SNP	SPARC	ENST00000231061	human	ensembl	74_37	-1	known	nonsense	c.231	p.C77*	1.000	pfam_Follistatin/Osteonectin_EGF,smart_Fol_N	pfam_SPARC/Testican_Ca-bd-dom,pfam_Follistatin/Osteonectin_EGF,pfam_Kazal_dom,smart_Fol_N,smart_Kazal_dom	-	no_errors	SPARC	HGNC	ENSG00000113140	tier1	-	-	173	0	0.00	148	25	14.45
SPAST	0	genome.wustl.edu	37	2	32370026	32370026	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	32370026	32370026	G	C	SNP	SPAST	ENST00000315285	human	ensembl	74_37	+1	known	missense	c.1637	p.G546A	1.000	superfamily_P-loop_NTPase,pirsf_Spastin	pfam_ATPase_AAA_core,pfam_MIT,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase,pirsf_Spastin	-	no_errors	SPAST	HGNC	ENSG00000021574	tier1	-	-	44	0	0.00	58	5	7.94
SPATA31D4	0	genome.wustl.edu	37	9	84547312	84547312	+	RNA	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	84547312	84547312	G	A	SNP	SPATA31D4	ENST00000341875	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPATA31D4	HGNC	ENSG00000189357	tier1	rs201894691	-	11	0	0.00	6	9	60.00
SRC	0	genome.wustl.edu	37	20	36031709	36031709	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	20	36031709	36031709	A	G	SNP	SRC	ENST00000360723	human	ensembl	74_37	+1	known	missense	c.1556	p.E519G	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	SRC	HGNC	ENSG00000197122				26	0	0.00	33	4	10.81
STAG3L4	0	genome.wustl.edu	37	7	66767610	66767611	+	RNA	INS	-	-	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	66767610	66767611	-	G	INS	STAG3L4	ENST00000416602	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.046:0.034	-	-	-	no_errors	STAG3L4	HGNC	ENSG00000106610	tier1			13	0	0.00	6	8	57.14
SYNE1	0	genome.wustl.edu	37	6	152560818	152560818	+	Silent	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	152560818	152560818	A	G	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.19917	p.S6639	0.947	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	106	0	0.00	76	22	22.45
SYNE2	0	genome.wustl.edu	37	14	64560097	64560097	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	14	64560097	64560097	G	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.12007	p.E4003K	1.000	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	101	0	0.00	114	17	12.98
SYNE4	0	genome.wustl.edu	37	19	36498123	36498123	+	Silent	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	36498123	36498123	C	A	SNP	SYNE4	ENST00000324444	human	ensembl	74_37	-1	known	silent	c.327	p.L109	0.262	NULL	pfam_KASH,pfscan_KASH	-	no_errors	SYNE4	HGNC	ENSG00000181392	tier1	-	-	10	0	0.00	8	4	33.33
TCF25	0	genome.wustl.edu	37	16	89965030	89965030	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	89965030	89965030	C	T	SNP	TCF25	ENST00000263346	human	ensembl	74_37	+1	known	missense	c.1088	p.A363V	0.999	pfam_TCF25	pfam_TCF25	-	no_errors	TCF25	HGNC	ENSG00000141002	tier1	-	-	210	0	0.00	77	45	36.89
TIGD7	0	genome.wustl.edu	37	16	3350502	3350502	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	3350502	3350502	C	G	SNP	TIGD7	ENST00000268674	human	ensembl	74_37	-1	known	missense	c.113	p.S38T	1.000	pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD7	HGNC	ENSG00000140993	tier1	-	-	122	0	0.00	116	22	15.83
TMEM51	0	genome.wustl.edu	37	1	15541793	15541794	+	Frame_Shift_Ins	INS	-	-	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	15541793	15541794	-	G	INS	TMEM51	ENST00000376008	human	ensembl	74_37	+1	known	frame_shift_ins	c.210_211	p.A71fs	0.198:1.000	NULL	NULL	-	no_errors	TMEM51	HGNC	ENSG00000171729	tier1			200	0	0.00	141	19	11.88
TNFRSF11B	0	genome.wustl.edu	37	8	119945315	119945315	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	119945315	119945315	G	A	SNP	TNFRSF11B	ENST00000297350	human	ensembl	74_37	-1	known	silent	c.255	p.P85	0.000	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,prints_TNFR_11B,pfscan_TNFR/NGFR_Cys_rich_reg	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_11B,prints_TNFR_11,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF11B	HGNC	ENSG00000164761	tier1	-	-	142	0	0.00	126	10	7.35
TRIM27	0	genome.wustl.edu	37	6	28879436	28879436	+	RNA	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	28879436	28879436	A	C	SNP	TRIM27	ENST00000498117	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TRIM27	HGNC	ENSG00000204713	tier1	-	-	84	0	0.00	54	21	28.00
TSPAN7	0	genome.wustl.edu	37	X	38533552	38533552	+	Frame_Shift_Del	DEL	G	G	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	38533552	38533552	G	-	DEL	TSPAN7	ENST00000422612	human	ensembl	74_37	+1	known	frame_shift_del	c.501	p.D168fs	1.000	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN7	HGNC	ENSG00000156298	tier1			18	0	0.00	4	2	33.33
TUBBP5	0	genome.wustl.edu	37	9	141070687	141070687	+	RNA	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	141070687	141070687	C	T	SNP	TUBBP5	ENST00000290377	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TUBBP5	HGNC	ENSG00000159247				34	0	0.00	32	5	13.51
TYROBP	0	genome.wustl.edu	37	19	36398182	36398182	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	36398182	36398182	G	T	SNP	TYROBP	ENST00000585901	human	ensembl	74_37	-1	putative	missense	c.307	p.H103N	0.000	NULL	NULL	-	no_errors	TYROBP	HGNC	ENSG00000011600	tier1	-	-	40	0	0.00	24	7	22.58
UBE4B	0	genome.wustl.edu	37	1	10192505	10192505	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	10192505	10192505	G	A	SNP	UBE4B	ENST00000343090	human	ensembl	74_37	+1	known	missense	c.1990	p.V664I	0.825	pfam_Ub_conjug_fac_E4_core	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4B	HGNC	ENSG00000130939	tier1	-	-	80	0	0.00	50	7	12.28
USH2A	0	genome.wustl.edu	37	1	216498831	216498831	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	216498831	216498831	A	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.959	p.I320N	1.000	smart_Laminin_N,pfscan_Laminin_N	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	118	0	0.00	114	23	16.79
VASN	0	genome.wustl.edu	37	16	4432313	4432313	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	4432313	4432313	G	T	SNP	VASN	ENST00000304735	human	ensembl	74_37	+1	known	missense	c.1435	p.G479W	0.899	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Leu-rich_rpt,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	VASN	HGNC	ENSG00000168140	tier1	-	-	28	0	0.00	25	8	24.24
VWA9	0	genome.wustl.edu	37	15	65871770	65871770	+	Silent	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	65871770	65871770	A	C	SNP	VWA9	ENST00000567744	human	ensembl	74_37	-1	known	silent	c.1641	p.S547	0.561	NULL	NULL	-	no_errors	VWA9	HGNC	ENSG00000138614	tier1	-	-	182	0	0.00	175	21	10.66
WLS	0	genome.wustl.edu	37	1	68611569	68611569	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	68611569	68611569	G	C	SNP	WLS	ENST00000540432	human	ensembl	74_37	-1	known	missense	c.1261	p.R421G	1.000	NULL	NULL	-	no_errors	WLS	HGNC	ENSG00000116729	tier1	-	-	173	0	0.00	143	29	16.86
ZFP3	0	genome.wustl.edu	37	17	4996147	4996147	+	Nonsense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	4996147	4996147	G	T	SNP	ZFP3	ENST00000318833	human	ensembl	74_37	+1	known	nonsense	c.1348	p.E450*	0.285	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP3	HGNC	ENSG00000180787	tier1	-	-	102	0	0.00	86	40	31.75
ZFP57	0	genome.wustl.edu	37	6	29640633	29640633	+	Missense_Mutation	SNP	T	T	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	29640633	29640633	T	G	SNP	ZFP57	ENST00000488757	human	ensembl	74_37	-1	known	missense	c.1255	p.K419Q	0.997	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP57	HGNC	ENSG00000204644	tier1	-	-	315	0	0.00	314	34	9.77
ZNF212	0	genome.wustl.edu	37	7	148947364	148947364	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	148947364	148947364	G	A	SNP	ZNF212	ENST00000335870	human	ensembl	74_37	+1	known	missense	c.139	p.A47T	0.797	pfam_DUF3669_Znf	pfam_Znf_C2H2,pfam_DUF3669_Znf,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF212	HGNC	ENSG00000170260	tier1	-	-	82	0	0.00	70	18	20.45
ZNF567	0	genome.wustl.edu	37	19	37203737	37203737	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	37203737	37203737	C	A	SNP	ZNF567	ENST00000536254	human	ensembl	74_37	+1	known	missense	c.191	p.P64Q	1.000	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF567	HGNC	ENSG00000189042	tier1	-	-	79	0	0.00	109	6	5.22
ZNF592	0	genome.wustl.edu	37	15	85327539	85327539	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	85327539	85327539	A	G	SNP	ZNF592	ENST00000299927	human	ensembl	74_37	+1	known	missense	c.1633	p.K545E	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716	tier1	-	-	152	0	0.00	157	18	10.23
ZNF667	0	genome.wustl.edu	37	19	56953039	56953039	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	56953039	56953039	G	A	SNP	ZNF667	ENST00000342634	human	ensembl	74_37	-1	known	missense	c.1709	p.P570L	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF667	HGNC	ENSG00000198046	tier1	-	-	76	0	0.00	66	12	15.38
ZSCAN29	0	genome.wustl.edu	37	15	43658446	43658446	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	43658446	43658446	G	A	SNP	ZSCAN29	ENST00000396976	human	ensembl	74_37	-1	known	missense	c.1084	p.P362S	0.911	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN29	HGNC	ENSG00000140265	tier1	-	-	118	0	0.00	84	15	15.15
UBE4B	0	genome.wustl.edu	37	1	10192505	10192505	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	10192505	10192505	G	A	SNP	UBE4B	ENST00000343090	human	ensembl	74_37	+1	known	missense	c.1990	p.V664I	0.825	pfam_Ub_conjug_fac_E4_core	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4B	HGNC	ENSG00000130939				60	0	0	43	6	12.2449
PSRC1	0	genome.wustl.edu	37	1	109823568	109823568	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	109823568	109823568	A	T	SNP	PSRC1	ENST00000409138	human	ensembl	74_37	-1	known	missense	c.825	p.S275R	0.974	NULL	NULL	-	no_errors	PSRC1	HGNC	ENSG00000134222				79	0	0	47	23	32.8571
AGMAT	0	genome.wustl.edu	37	1	15911273	15911273	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	15911273	15911273	C	A	SNP	AGMAT	ENST00000375826	human	ensembl	74_37	-1	known	missense	c.190	p.V64L	0.041	NULL	pfam_Ureohydrolase,prints_Ureohydrolase,tigrfam_Agmatinase-rel	-	no_errors	AGMAT	HGNC	ENSG00000116771				9	0	0	9	5	35.7143
MAEL	0	genome.wustl.edu	37	1	166985522	166985522	+	Splice_Site	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	166985522	166985522	G	A	SNP	MAEL	ENST00000367872	human	ensembl	74_37	+1	known	splice_site	c.908+1	e9+1	1.000	-	-	-	no_errors	MAEL	HGNC	ENSG00000143194				105	0	0	113	14	11.0236
KIFAP3	0	genome.wustl.edu	37	1	169952006	169952006	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	169952006	169952006	A	T	SNP	KIFAP3	ENST00000361580	human	ensembl	74_37	-1	known	missense	c.1509	p.D503E	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	KIFAP3	HGNC	ENSG00000075945				57	0	0	46	29	38.6667
GAS5	0	genome.wustl.edu	37	1	173833335	173833335	+	RNA	SNP	T	T	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	173833335	173833335	T	A	SNP	GAS5	ENST00000363840	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	GAS5	HGNC	ENSG00000234741				53	0	0	58	19	24.6753
PDC	0	genome.wustl.edu	37	1	186413559	186413559	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	186413559	186413559	A	G	SNP	PDC	ENST00000340129	human	ensembl	74_37	-1	known	missense	c.293	p.M98T	1.000	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	-	no_errors	PDC	HGNC	ENSG00000116703				167	0	0	177	20	10.1523
PTPRC	0	genome.wustl.edu	37	1	198685920	198685920	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	198685920	198685920	G	A	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	silent	c.1401	p.V467	0.000	pirsf_Leukocyte_common_ag,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237				71	0	0	52	4	7.14286
CHI3L1	0	genome.wustl.edu	37	1	203150364	203150364	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	203150364	203150364	G	A	SNP	CHI3L1	ENST00000255409	human	ensembl	74_37	-1	known	missense	c.637	p.R213C	0.997	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	CHI3L1	HGNC	ENSG00000133048				121	0	0	120	10	7.69231
USH2A	0	genome.wustl.edu	37	1	216498831	216498831	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	216498831	216498831	A	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.959	p.I320N	1.000	smart_Laminin_N,pfscan_Laminin_N	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				109	0	0	104	20	16.129
CHRM3	0	genome.wustl.edu	37	1	240071671	240071671	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	240071671	240071671	A	C	SNP	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	missense	c.920	p.K307T	0.945	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019				65	0	0	64	30	31.9149
ARID1A	0	genome.wustl.edu	37	1	27058048	27058048	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	27058048	27058048	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	nonsense	c.1756	p.Q586*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				337	0	0	123	93	43.0556
WLS	0	genome.wustl.edu	37	1	68611569	68611569	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	68611569	68611569	G	C	SNP	WLS	ENST00000540432	human	ensembl	74_37	-1	known	missense	c.1261	p.R421G	1.000	NULL	NULL	-	no_errors	WLS	HGNC	ENSG00000116729				149	0	0	132	25	15.9236
CTH	0	genome.wustl.edu	37	1	70899633	70899633	+	Splice_Site	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	70899633	70899633	G	T	SNP	CTH	ENST00000370938	human	ensembl	74_37	+1	known	splice_site	c.999+1	e9+1	1.000	-	-	-	no_errors	CTH	HGNC	ENSG00000116761				52	0	0	47	14	22.9508
RBMXL1	0	genome.wustl.edu	37	1	89448733	89448733	+	Silent	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	89448733	89448733	G	T	SNP	RBMXL1	ENST00000321792	human	ensembl	74_37	-1	known	silent	c.777	p.G259	1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL1	HGNC	ENSG00000213516				228	0	0	249	20	7.43494
EBF3	0	genome.wustl.edu	37	10	131665478	131665478	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	10	131665478	131665478	G	A	SNP	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	silent	c.966	p.G322	0.988	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001				68	0	0	40	35	46.6667
ARMC4	0	genome.wustl.edu	37	10	28270418	28270418	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	10	28270418	28270418	A	C	SNP	ARMC4	ENST00000305242	human	ensembl	74_37	-1	known	missense	c.913	p.F305V	0.991	superfamily_GSKIP_dom	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_GSKIP_dom,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC4	HGNC	ENSG00000169126				102	0	0	77	13	14.4444
ZNF365	0	genome.wustl.edu	37	10	64135979	64135979	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	10	64135979	64135979	C	A	SNP	ZNF365	ENST00000410046	human	ensembl	74_37	+1	known	missense	c.27	p.S9R	1.000	NULL	NULL	-	no_errors	ZNF365	HGNC	ENSG00000138311				161	0	0	133	12	8.27586
PRKCQ	0	genome.wustl.edu	37	10	6472894	6472894	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	10	6472894	6472894	C	T	SNP	PRKCQ	ENST00000263125	human	ensembl	74_37	-1	known	missense	c.1843	p.V615M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Prot_kin_PKC_delta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675				71	0	0	37	26	41.2698
ATM	0	genome.wustl.edu	37	11	108196196	108196196	+	Silent	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	108196196	108196196	A	G	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	silent	c.6732	p.R2244	0.620	pfam_PIK-rel_kinase_FAT,superfamily_ARM-type_fold,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311				116	0	0	91	6	6.18557
OR10G4	0	genome.wustl.edu	37	11	123887117	123887117	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	123887117	123887117	C	T	SNP	OR10G4	ENST00000320891	human	ensembl	74_37	+1	known	missense	c.836	p.T279M	0.438	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G4	HGNC	ENSG00000254737				100	0	0	85	26	23.4234
KIRREL3	0	genome.wustl.edu	37	11	126294781	126294781	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	126294781	126294781	G	A	SNP	KIRREL3	ENST00000525144	human	ensembl	74_37	-1	known	silent	c.2031	p.N677	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL3	HGNC	ENSG00000149571				40	0	0	45	5	10
GAS2	0	genome.wustl.edu	37	11	22770786	22770786	+	Silent	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	22770786	22770786	A	G	SNP	GAS2	ENST00000278187	human	ensembl	74_37	+1	known	silent	c.594	p.T198	0.990	NULL	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2	HGNC	ENSG00000148935				95	0	0	70	6	7.89474
HIPK3	0	genome.wustl.edu	37	11	33360383	33360383	+	Silent	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	33360383	33360383	A	T	SNP	HIPK3	ENST00000303296	human	ensembl	74_37	+1	known	silent	c.1422	p.V474	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK3	HGNC	ENSG00000110422				126	0	0	101	6	5.60748
OR5M3	0	genome.wustl.edu	37	11	56237511	56237511	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	56237511	56237511	G	C	SNP	OR5M3	ENST00000312240	human	ensembl	74_37	-1	known	missense	c.463	p.L155V	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M3	HGNC	ENSG00000174937				192	0	0	161	15	8.52273
FAM111B	0	genome.wustl.edu	37	11	58892180	58892180	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	11	58892180	58892180	C	A	SNP	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	missense	c.610	p.L204I	0.218	NULL	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057				91	0	0	100	6	5.66038
PIWIL1	0	genome.wustl.edu	37	12	130856119	130856119	+	Silent	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	12	130856119	130856119	G	T	SNP	PIWIL1	ENST00000245255	human	ensembl	74_37	+1	known	silent	c.2562	p.L854	0.996	superfamily_RNaseH-like_dom	pfam_Piwi,pfam_PAZ_dom,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207				180	0	0	157	15	8.72093
DDX11	0	genome.wustl.edu	37	12	31238020	31238020	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	12	31238020	31238020	G	A	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	missense	c.598	p.A200T	0.563	superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573				21	0	0	18	5	21.7391
DDX11	0	genome.wustl.edu	37	12	31238023	31238023	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	12	31238023	31238023	G	A	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	missense	c.601	p.E201K	0.986	superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573				20	0	0	17	4	19.0476
KRT79	0	genome.wustl.edu	37	12	53225274	53225274	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	12	53225274	53225274	G	A	SNP	KRT79	ENST00000330553	human	ensembl	74_37	-1	known	missense	c.614	p.T205M	0.992	pfam_IF,superfamily_STAT_TF_coiled-coil	pfam_IF,superfamily_STAT_TF_coiled-coil,prints_Keratin_II	-	no_errors	KRT79	HGNC	ENSG00000185640				191	0	0	125	59	32.0652
GAPDH	0	genome.wustl.edu	37	12	6646855	6646855	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	12	6646855	6646855	A	G	SNP	GAPDH	ENST00000229239	human	ensembl	74_37	+1	known	missense	c.631	p.T211A	0.998	pfam_GlycerAld_3-P_DH_cat,pirsf_GlycerAld/Erythrose_P_DH,tigrfam_Glyceraldehyde-3-P_DH_1	pfam_GlycerAld_3-P_DH_cat,pfam_GlycerAld_3-P_DH_NAD(P)-bd,smart_GlycerAld_3-P_DH_NAD(P)-bd,pirsf_GlycerAld/Erythrose_P_DH,prints_GlycerAld/Erythrose_P_DH,tigrfam_Glyceraldehyde-3-P_DH_1	-	no_errors	GAPDH	HGNC	ENSG00000111640				68	0	0	52	20	27.7778
SPACA7	0	genome.wustl.edu	37	13	113030732	113030732	+	Nonsense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	13	113030732	113030732	C	A	SNP	SPACA7	ENST00000283550	human	ensembl	74_37	+1	known	nonsense	c.33	p.C11*	0.026	NULL	NULL	-	no_errors	SPACA7	HGNC	ENSG00000153498				30	0	0	34	3	8.10811
MTMR6	0	genome.wustl.edu	37	13	25826019	25826019	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	13	25826019	25826019	C	T	SNP	MTMR6	ENST00000381801	human	ensembl	74_37	-1	known	missense	c.1450	p.E484K	1.000	NULL	pfam_Myotubularin-like_Pase_dom,smart_Tyr_Pase_cat	-	no_errors	MTMR6	HGNC	ENSG00000139505				196	0	0	177	28	13.6585
KCNH5	0	genome.wustl.edu	37	14	63174581	63174581	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	14	63174581	63174581	C	T	SNP	KCNH5	ENST00000322893	human	ensembl	74_37	-1	known	missense	c.2612	p.S871N	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH5	HGNC	ENSG00000140015				138	0	0	142	18	11.25
SYNE2	0	genome.wustl.edu	37	14	64560097	64560097	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	14	64560097	64560097	G	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.12007	p.E4003K	1.000	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				100	0	0	108	17	13.6
NPAP1	0	genome.wustl.edu	37	15	24923259	24923259	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	24923259	24923259	C	T	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.2245	p.P749S	0.001	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823				289	0	0	153	28	15.4696
ZSCAN29	0	genome.wustl.edu	37	15	43658446	43658446	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	43658446	43658446	G	A	SNP	ZSCAN29	ENST00000396976	human	ensembl	74_37	-1	known	missense	c.1084	p.P362S	0.911	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN29	HGNC	ENSG00000140265				115	0	0	81	15	15.625
DUOXA2	0	genome.wustl.edu	37	15	45408874	45408874	+	Silent	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	45408874	45408874	C	T	SNP	DUOXA2	ENST00000323030	human	ensembl	74_37	+1	known	silent	c.501	p.C167	0.996	pfam_Dual_oxidase_maturation_fac	pfam_Dual_oxidase_maturation_fac	-	no_errors	DUOXA2	HGNC	ENSG00000140274				81	0	0	71	17	19.3182
VWA9	0	genome.wustl.edu	37	15	65871770	65871770	+	Silent	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	65871770	65871770	A	C	SNP	VWA9	ENST00000567744	human	ensembl	74_37	-1	known	silent	c.1641	p.S547	0.561	NULL	NULL	-	no_errors	VWA9	HGNC	ENSG00000138614				161	0	0	157	18	10.2857
ZNF592	0	genome.wustl.edu	37	15	85327539	85327539	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	85327539	85327539	A	G	SNP	ZNF592	ENST00000299927	human	ensembl	74_37	+1	known	missense	c.1633	p.K545E	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716				147	0	0	147	17	10.3659
AGBL1	0	genome.wustl.edu	37	15	86807659	86807659	+	Silent	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	86807659	86807659	G	T	SNP	AGBL1	ENST00000441037	human	ensembl	74_37	+1	known	silent	c.1119	p.V373	0.921	superfamily_ARM-type_fold	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGBL1	HGNC	ENSG00000166748				44	0	0	53	8	13.1148
MAN2A2	0	genome.wustl.edu	37	15	91461481	91461481	+	Missense_Mutation	SNP	T	T	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	15	91461481	91461481	T	A	SNP	MAN2A2	ENST00000360468	human	ensembl	74_37	+1	known	missense	c.3052	p.Y1018N	0.859	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2A2	HGNC	ENSG00000196547				213	0	0	199	11	5.2381
SOX8	0	genome.wustl.edu	37	16	1034859	1034859	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	1034859	1034859	G	A	SNP	SOX8	ENST00000293894	human	ensembl	74_37	+1	known	missense	c.814	p.E272K	1.000	NULL	pfam_HMG_box_dom,pfam_Sox_N,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX8	HGNC	ENSG00000005513				68	0	0	52	18	25.7143
HS3ST4	0	genome.wustl.edu	37	16	26147374	26147374	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	26147374	26147374	G	T	SNP	HS3ST4	ENST00000331351	human	ensembl	74_37	+1	known	missense	c.1176	p.K392N	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST4	HGNC	ENSG00000182601				51	0	0	51	5	8.92857
MVP	0	genome.wustl.edu	37	16	29855978	29855978	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	29855978	29855978	G	A	SNP	MVP	ENST00000357402	human	ensembl	74_37	+1	known	missense	c.1799	p.R600H	1.000	pfam_MVP_shoulder	pfam_Vault_N,pfam_MVP_shoulder	-	no_errors	MVP	HGNC	ENSG00000013364				226	0	0	150	64	29.9065
TIGD7	0	genome.wustl.edu	37	16	3350502	3350502	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	3350502	3350502	C	G	SNP	TIGD7	ENST00000268674	human	ensembl	74_37	-1	known	missense	c.113	p.S38T	1.000	pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD7	HGNC	ENSG00000140993				119	0	0	110	21	16.0305
VASN	0	genome.wustl.edu	37	16	4432313	4432313	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	4432313	4432313	G	T	SNP	VASN	ENST00000304735	human	ensembl	74_37	+1	known	missense	c.1435	p.G479W	0.899	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Leu-rich_rpt,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	VASN	HGNC	ENSG00000168140				27	0	0	25	6	19.3548
NMRAL1	0	genome.wustl.edu	37	16	4511878	4511878	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	4511878	4511878	G	C	SNP	NMRAL1	ENST00000283429	human	ensembl	74_37	-1	known	missense	c.803	p.P268R	0.989	NULL	pfam_NmrA,pfam_DH_sc/Rdtase_SDR,pfam_RCK_N	-	no_errors	NMRAL1	HGNC	ENSG00000153406				307	0	0	275	15	5.17241
CHD9	0	genome.wustl.edu	37	16	53190619	53190619	+	Silent	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	53190619	53190619	T	C	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	silent	c.618	p.H206	0.877	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200				217	0	0	123	66	34.9206
HPR	0	genome.wustl.edu	37	16	72110570	72110570	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	72110570	72110570	A	G	SNP	HPR	ENST00000228226	human	ensembl	74_37	+1	known	missense	c.748	p.N250D	0.949	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	HPR	HGNC	ENSG00000261701				144	0	0	61	51	45.5357
TCF25	0	genome.wustl.edu	37	16	89965030	89965030	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	16	89965030	89965030	C	T	SNP	TCF25	ENST00000263346	human	ensembl	74_37	+1	known	missense	c.1088	p.A363V	0.999	pfam_TCF25	pfam_TCF25	-	no_errors	TCF25	HGNC	ENSG00000141002				199	0	0	72	41	36.2832
EZH1	0	genome.wustl.edu	37	17	40871153	40871153	+	Missense_Mutation	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	40871153	40871153	T	C	SNP	EZH1	ENST00000428826	human	ensembl	74_37	-1	known	missense	c.737	p.E246G	1.000	smart_SANT/Myb	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH1	HGNC	ENSG00000108799				287	0	0	325	30	8.4507
ZFP3	0	genome.wustl.edu	37	17	4996147	4996147	+	Nonsense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	4996147	4996147	G	T	SNP	ZFP3	ENST00000318833	human	ensembl	74_37	+1	known	nonsense	c.1348	p.E450*	0.285	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP3	HGNC	ENSG00000180787				95	0	0	79	34	30.0885
MED13	0	genome.wustl.edu	37	17	60040165	60040165	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	60040165	60040165	A	G	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	missense	c.5012	p.L1671P	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510				179	0	0	118	41	25.7862
TBC1D3P2	0	genome.wustl.edu	37	17	60342186	60342186	+	RNA	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	60342186	60342186	T	C	SNP	TBC1D3P2	ENST00000581291	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.062	-	-	-	no_errors	TBC1D3P2	HGNC	ENSG00000188755				19	0	0	20	4	16.6667
PFAS	0	genome.wustl.edu	37	17	8172066	8172066	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	17	8172066	8172066	G	T	SNP	PFAS	ENST00000314666	human	ensembl	74_37	+1	known	missense	c.3598	p.G1200W	1.000	tigrfam_PRibForGlyAmidine_synth	pfam_AIR_synth_C_dom,pfam_AIR_synth_N_dom,superfamily_PurM_N-like,superfamily_AIR_synth_C_dom,tigrfam_PRibForGlyAmidine_synth	-	no_errors	PFAS	HGNC	ENSG00000178921				95	0	0	74	12	13.9535
CTAGE1	0	genome.wustl.edu	37	18	19995825	19995825	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	18	19995825	19995825	G	A	SNP	CTAGE1	ENST00000391403	human	ensembl	74_37	-1	known	silent	c.1950	p.P650	0.390	NULL	NULL	-	no_errors	CTAGE1	HGNC	ENSG00000212710				336	0	0	499	120	19.3861
SMAD4	0	genome.wustl.edu	37	18	48591900	48591900	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	18	48591900	48591900	G	T	SNP	SMAD4	ENST00000342988	human	ensembl	74_37	+1	known	missense	c.1063	p.D355Y	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD4	HGNC	ENSG00000141646				151	0	0	66	39	37.1429
SYNE4	0	genome.wustl.edu	37	19	36498123	36498123	+	Silent	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	36498123	36498123	C	A	SNP	SYNE4	ENST00000324444	human	ensembl	74_37	-1	known	silent	c.327	p.L109	0.262	NULL	pfam_KASH,pfscan_KASH	-	no_errors	SYNE4	HGNC	ENSG00000181392				9	0	0	8	4	33.3333
ZNF567	0	genome.wustl.edu	37	19	37203737	37203737	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	37203737	37203737	C	A	SNP	ZNF567	ENST00000536254	human	ensembl	74_37	+1	known	missense	c.191	p.P64Q	1.000	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF567	HGNC	ENSG00000189042				72	0	0	92	5	5.15464
ZNF428	0	genome.wustl.edu	37	19	44112042	44112042	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	44112042	44112042	G	A	SNP	ZNF428	ENST00000300811	human	ensembl	74_37	-1	known	silent	c.294	p.R98	0.983	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF428	HGNC	ENSG00000131116				10	0	0	18	3	14.2857
ZNF667	0	genome.wustl.edu	37	19	56953039	56953039	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	56953039	56953039	G	A	SNP	ZNF667	ENST00000342634	human	ensembl	74_37	-1	known	missense	c.1709	p.P570L	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF667	HGNC	ENSG00000198046				73	0	0	62	11	15.0685
MUC16	0	genome.wustl.edu	37	19	9010666	9010666	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	19	9010666	9010666	A	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.38995	p.S12999P	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				37	0	0	19	10	34.4828
MARCO	0	genome.wustl.edu	37	2	119750742	119750742	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	119750742	119750742	G	T	SNP	MARCO	ENST00000327097	human	ensembl	74_37	+1	known	missense	c.1295	p.R432L	0.791	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	pfam_Collagen,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	MARCO	HGNC	ENSG00000019169				166	0	0	102	44	30.137
NEB	0	genome.wustl.edu	37	2	152466520	152466520	+	Silent	SNP	T	T	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	152466520	152466520	T	G	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.12133	p.R4045	0.707	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				66	0	0	70	9	11.3924
KLHL41	0	genome.wustl.edu	37	2	170371206	170371206	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	170371206	170371206	G	T	SNP	KLHL41	ENST00000284669	human	ensembl	74_37	+1	known	missense	c.1233	p.E411D	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL41	HGNC	ENSG00000239474				145	0	0	149	15	9.14634
PPIG	0	genome.wustl.edu	37	2	170488304	170488304	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	170488304	170488304	C	G	SNP	PPIG	ENST00000260970	human	ensembl	74_37	+1	known	missense	c.790	p.L264V	1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIG	HGNC	ENSG00000138398				148	0	0	102	37	26.6187
RAPGEF4	0	genome.wustl.edu	37	2	173894949	173894949	+	Silent	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	173894949	173894949	C	T	SNP	RAPGEF4	ENST00000397081	human	ensembl	74_37	+1	known	silent	c.2616	p.N872	0.990	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428				84	0	0	56	19	25.3333
SPAST	0	genome.wustl.edu	37	2	32370026	32370026	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	32370026	32370026	G	C	SNP	SPAST	ENST00000315285	human	ensembl	74_37	+1	known	missense	c.1637	p.G546A	1.000	superfamily_P-loop_NTPase,pirsf_Spastin	pfam_ATPase_AAA_core,pfam_MIT,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase,pirsf_Spastin	-	no_errors	SPAST	HGNC	ENSG00000021574				35	0	0	48	5	9.43396
MTIF2	0	genome.wustl.edu	37	2	55464532	55464532	+	Missense_Mutation	SNP	T	T	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	55464532	55464532	T	G	SNP	MTIF2	ENST00000263629	human	ensembl	74_37	-1	known	missense	c.1903	p.T635P	1.000	superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,pfam_GTP_binding_domain,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,superfamily_TIF_IF2_dom3,superfamily_Transl_B-barrel,tigrfam_Small_GTP-bd_dom	-	no_errors	MTIF2	HGNC	ENSG00000085760				78	0	0	62	7	10.1449
C2orf78	0	genome.wustl.edu	37	2	74043291	74043291	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	2	74043291	74043291	A	C	SNP	C2orf78	ENST00000409561	human	ensembl	74_37	+1	novel	missense	c.1941	p.K647N	0.000	NULL	NULL	-	no_errors	C2orf78	HGNC	ENSG00000187833				88	0	0	55	33	37.5
BPIFB2	0	genome.wustl.edu	37	20	31606879	31606879	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	20	31606879	31606879	C	A	SNP	BPIFB2	ENST00000170150	human	ensembl	74_37	+1	known	missense	c.867	p.D289E	0.948	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB2	HGNC	ENSG00000078898				180	0	0	145	42	22.4599
SRC	0	genome.wustl.edu	37	20	36031709	36031709	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	20	36031709	36031709	A	G	SNP	SRC	ENST00000360723	human	ensembl	74_37	+1	known	missense	c.1556	p.E519G	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	SRC	HGNC	ENSG00000197122				23	0	0	29	3	9.375
CLTCL1	0	genome.wustl.edu	37	22	19223386	19223386	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	22	19223386	19223386	C	A	SNP	CLTCL1	ENST00000263200	human	ensembl	74_37	-1	known	missense	c.802	p.A268S	0.055	superfamily_Clathrin_H-chain_propeller_N,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTCL1	HGNC	ENSG00000070371				65	0	0	36	4	10
NEFH	0	genome.wustl.edu	37	22	29884965	29884965	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	22	29884965	29884965	G	T	SNP	NEFH	ENST00000310624	human	ensembl	74_37	+1	known	missense	c.1336	p.V446L	0.507	NULL	pfam_IF,pfam_DUF1388	-	no_errors	NEFH	HGNC	ENSG00000100285				103	0	0	61	12	16.4384
CNTN6	0	genome.wustl.edu	37	3	1337472	1337472	+	Silent	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	1337472	1337472	A	G	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	silent	c.642	p.L214	0.608	smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115				60	0	0	43	7	14
NCK1	0	genome.wustl.edu	37	3	136646967	136646967	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	136646967	136646967	C	T	SNP	NCK1	ENST00000288986	human	ensembl	74_37	+1	known	nonsense	c.124	p.R42*	0.999	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pirsf_Cytoplasmic_NCK,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_SH2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pirsf_Cytoplasmic_NCK,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	NCK1	HGNC	ENSG00000158092				99	0	0	96	11	10.2804
IL20RB	0	genome.wustl.edu	37	3	136714377	136714377	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	136714377	136714377	G	A	SNP	IL20RB	ENST00000329582	human	ensembl	74_37	+1	known	silent	c.804	p.V268	0.005	NULL	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL20RB	HGNC	ENSG00000174564				451	0	0	427	41	8.76068
DZIP1L	0	genome.wustl.edu	37	3	137781750	137781750	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	137781750	137781750	C	G	SNP	DZIP1L	ENST00000327532	human	ensembl	74_37	-1	known	missense	c.2212	p.E738Q	0.005	NULL	pfscan_Znf_C2H2	-	no_errors	DZIP1L	HGNC	ENSG00000158163				108	0	0	85	12	12.3711
PPM1L	0	genome.wustl.edu	37	3	160786805	160786805	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	160786805	160786805	C	G	SNP	PPM1L	ENST00000498165	human	ensembl	74_37	+1	known	missense	c.943	p.R315G	0.998	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1L	HGNC	ENSG00000163590				134	0	0	154	14	8.33333
LINC00969	0	genome.wustl.edu	37	3	195400848	195400848	+	RNA	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	195400848	195400848	G	A	SNP	LINC00969	ENST00000414625	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.725	-	-	-	no_errors	LINC00969	HGNC	ENSG00000242086				23	0	0	13	4	23.5294
MUC4	0	genome.wustl.edu	37	3	195505870	195505870	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	195505870	195505870	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.12581	p.P4194L	0.476	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				9	0	0	16	3	15.7895
MUC4	0	genome.wustl.edu	37	3	195508133	195508133	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	195508133	195508133	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.10318	p.P3440S	0.010	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				11	0	0	9	4	30.7692
WDR48	0	genome.wustl.edu	37	3	39108243	39108243	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	39108243	39108243	G	A	SNP	WDR48	ENST00000302313	human	ensembl	74_37	+1	known	missense	c.358	p.V120I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF3337,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR48	HGNC	ENSG00000114742				162	1	0.613497	69	44	38.9381
FLNB	0	genome.wustl.edu	37	3	58111404	58111404	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	3	58111404	58111404	A	T	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.3995	p.Q1332L	0.019	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				148	0	0	128	10	7.24638
DKK2	0	genome.wustl.edu	37	4	107846967	107846967	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	4	107846967	107846967	C	T	SNP	DKK2	ENST00000285311	human	ensembl	74_37	-1	novel	missense	c.362	p.R121H	1.000	pfam_Dickkopf_N,superfamily_Zn2-C6_fun-type_DNA-bd	pfam_Dickkopf_N,superfamily_Zn2-C6_fun-type_DNA-bd	-	no_errors	DKK2	HGNC	ENSG00000155011				173	0	0	135	9	6.25
ETNPPL	0	genome.wustl.edu	37	4	109664983	109664983	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	4	109664983	109664983	C	T	SNP	ETNPPL	ENST00000296486	human	ensembl	74_37	-1	known	missense	c.1333	p.E445K	0.000	NULL	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	-	no_errors	ETNPPL	HGNC	ENSG00000164089				100	0	0	81	13	13.8298
C4orf26	0	genome.wustl.edu	37	4	76489417	76489417	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	4	76489417	76489417	C	T	SNP	C4orf26	ENST00000435974	human	ensembl	74_37	+1	putative	nonsense	c.205	p.R69*	0.036	NULL	NULL	-	no_errors	C4orf26	HGNC	ENSG00000174792				163	0	0	128	20	13.5135
HBEGF	0	genome.wustl.edu	37	5	139725639	139725639	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	139725639	139725639	A	C	SNP	HBEGF	ENST00000230990	human	ensembl	74_37	-1	known	missense	c.77	p.L26R	0.995	NULL	pfscan_EG-like_dom	-	no_errors	HBEGF	HGNC	ENSG00000113070				49	0	0	28	10	26.3158
PDE6A	0	genome.wustl.edu	37	5	149247320	149247320	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	149247320	149247320	G	T	SNP	PDE6A	ENST00000255266	human	ensembl	74_37	-1	known	missense	c.2242	p.L748M	1.000	pfam_PDEase_catalytic_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6A	HGNC	ENSG00000132915				62	0	0	38	13	25.4902
SPARC	0	genome.wustl.edu	37	5	151051233	151051233	+	Nonsense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	151051233	151051233	G	T	SNP	SPARC	ENST00000231061	human	ensembl	74_37	-1	known	nonsense	c.231	p.C77*	1.000	pfam_Follistatin/Osteonectin_EGF,smart_Fol_N	pfam_SPARC/Testican_Ca-bd-dom,pfam_Follistatin/Osteonectin_EGF,pfam_Kazal_dom,smart_Fol_N,smart_Kazal_dom	-	no_errors	SPARC	HGNC	ENSG00000113140				161	0	0	136	22	13.9241
HK3	0	genome.wustl.edu	37	5	176314297	176314297	+	Missense_Mutation	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	176314297	176314297	A	G	SNP	HK3	ENST00000292432	human	ensembl	74_37	-1	known	missense	c.1642	p.F548L	1.000	pfam_Hexokinase_N,prints_Hexokinase	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK3	HGNC	ENSG00000160883				104	0	0	60	6	9.09091
NIPBL	0	genome.wustl.edu	37	5	37016190	37016190	+	Missense_Mutation	SNP	T	T	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	5	37016190	37016190	T	A	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.4694	p.F1565Y	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				94	0	0	59	11	15.7143
SYNE1	0	genome.wustl.edu	37	6	152560818	152560818	+	Silent	SNP	A	A	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	152560818	152560818	A	G	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.19917	p.S6639	0.947	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				94	0	0	68	21	23.5955
SMOC2	0	genome.wustl.edu	37	6	168927117	168927117	+	Silent	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	168927117	168927117	C	T	SNP	SMOC2	ENST00000354536	human	ensembl	74_37	+1	known	silent	c.348	p.D116	0.990	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_EF_hand_dom,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562				118	0	0	65	5	7.14286
ZFP57	0	genome.wustl.edu	37	6	29640633	29640633	+	Missense_Mutation	SNP	T	T	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	29640633	29640633	T	G	SNP	ZFP57	ENST00000488757	human	ensembl	74_37	-1	known	missense	c.1255	p.K419Q	0.997	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP57	HGNC	ENSG00000204644				275	0	0	286	31	9.77918
SLC44A4	0	genome.wustl.edu	37	6	31833680	31833680	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	31833680	31833680	G	A	SNP	SLC44A4	ENST00000229729	human	ensembl	74_37	-1	known	missense	c.1457	p.P486L	1.000	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A4	HGNC	ENSG00000204385				115	0	0	128	13	9.21986
CDYL	0	genome.wustl.edu	37	6	4716083	4716083	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	4716083	4716083	C	A	SNP	CDYL	ENST00000328908	human	ensembl	74_37	+1	known	missense	c.71	p.P24Q	0.000	NULL	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046				57	0	0	44	5	10.2041
CDYL	0	genome.wustl.edu	37	6	4952584	4952584	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	6	4952584	4952584	G	A	SNP	CDYL	ENST00000328908	human	ensembl	74_37	+1	known	missense	c.1579	p.G527R	0.999	NULL	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046				105	0	0	57	41	41.8367
IMMP2L	0	genome.wustl.edu	37	7	110303717	110303717	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	110303717	110303717	G	T	SNP	IMMP2L	ENST00000331762	human	ensembl	74_37	-1	known	missense	c.469	p.Q157K	1.000	superfamily_Peptidase_S24_S26A/B/C	pfam_Peptidase_S24_S26,superfamily_Peptidase_S24_S26A/B/C,prints_Pept_S26A_signal_pept_1,tigrfam_Pept_S26A_signal_pept_1	-	no_errors	IMMP2L	HGNC	ENSG00000184903				109	0	0	109	10	8.40336
FOXP2	0	genome.wustl.edu	37	7	114282671	114282671	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	114282671	114282671	C	T	SNP	FOXP2	ENST00000408937	human	ensembl	74_37	+1	known	nonsense	c.1057	p.R353*	0.961	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP2	HGNC	ENSG00000128573				129	0	0	113	8	6.61157
ZNF212	0	genome.wustl.edu	37	7	148947364	148947364	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	148947364	148947364	G	A	SNP	ZNF212	ENST00000335870	human	ensembl	74_37	+1	known	missense	c.139	p.A47T	0.797	pfam_DUF3669_Znf	pfam_Znf_C2H2,pfam_DUF3669_Znf,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF212	HGNC	ENSG00000170260				80	0	0	66	17	20.4819
AGAP3	0	genome.wustl.edu	37	7	150835321	150835321	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	150835321	150835321	C	A	SNP	AGAP3	ENST00000397238	human	ensembl	74_37	+1	known	missense	c.1587	p.H529Q	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP3	HGNC	ENSG00000133612				53	0	0	41	10	19.6078
SDK1	0	genome.wustl.edu	37	7	4285416	4285416	+	Silent	SNP	G	G	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	4285416	4285416	G	C	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	silent	c.6360	p.S2120	0.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				89	0	0	91	9	9
LIMK1	0	genome.wustl.edu	37	7	73534914	73534914	+	Silent	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	73534914	73534914	C	T	SNP	LIMK1	ENST00000336180	human	ensembl	74_37	+1	known	silent	c.1569	p.G523	0.988	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Znf_LIM,pfam_PDZ,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK1	HGNC	ENSG00000106683				122	0	0	135	8	5.59441
ABCB1	0	genome.wustl.edu	37	7	87225104	87225104	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	87225104	87225104	G	T	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.95	p.P32Q	1.000	superfamily_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563				76	0	0	73	7	8.75
SAMD9	0	genome.wustl.edu	37	7	92730872	92730872	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	92730872	92730872	C	G	SNP	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	missense	c.4539	p.Q1513H	0.973	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413				97	0	0	88	10	10.2041
TNFRSF11B	0	genome.wustl.edu	37	8	119945315	119945315	+	Silent	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	119945315	119945315	G	A	SNP	TNFRSF11B	ENST00000297350	human	ensembl	74_37	-1	known	silent	c.255	p.P85	0.000	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,prints_TNFR_11B,pfscan_TNFR/NGFR_Cys_rich_reg	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_11B,prints_TNFR_11,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF11B	HGNC	ENSG00000164761				138	0	0	117	9	7.14286
CYP11B1	0	genome.wustl.edu	37	8	143961062	143961062	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	143961062	143961062	C	G	SNP	CYP11B1	ENST00000292427	human	ensembl	74_37	-1	known	missense	c.168	p.W56C	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP11B1	HGNC	ENSG00000160882				97	0	0	87	29	25
CSGALNACT1	0	genome.wustl.edu	37	8	19362917	19362917	+	Nonsense_Mutation	SNP	A	A	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	19362917	19362917	A	T	SNP	CSGALNACT1	ENST00000311540	human	ensembl	74_37	-1	known	nonsense	c.429	p.Y143*	0.261	NULL	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408				113	0	0	117	16	12.0301
SNAI2	0	genome.wustl.edu	37	8	49832582	49832582	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	49832582	49832582	C	A	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	missense	c.498	p.K166N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549				114	0	0	85	6	6.59341
PLAG1	0	genome.wustl.edu	37	8	57079437	57079437	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	8	57079437	57079437	G	A	SNP	PLAG1	ENST00000316981	human	ensembl	74_37	-1	known	missense	c.868	p.L290F	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PLAG1	HGNC	ENSG00000181690				270	0	0	190	80	29.6296
GRIN3A	0	genome.wustl.edu	37	9	104499894	104499894	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	104499894	104499894	C	T	SNP	GRIN3A	ENST00000361820	human	ensembl	74_37	-1	known	nonsense	c.368	p.W123*	1.000	superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785				53	0	0	42	4	8.69565
TUBBP5	0	genome.wustl.edu	37	9	141070687	141070687	+	RNA	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	141070687	141070687	C	T	SNP	TUBBP5	ENST00000290377	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TUBBP5	HGNC	ENSG00000159247				31	0	0	31	5	13.8889
LINGO2	0	genome.wustl.edu	37	9	27949053	27949053	+	Silent	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	27949053	27949053	T	C	SNP	LINGO2	ENST00000308675	human	ensembl	74_37	-1	known	silent	c.1617	p.K539	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO2	HGNC	ENSG00000174482				157	0	0	119	14	10.5263
PTPDC1	0	genome.wustl.edu	37	9	96857666	96857666	+	Silent	SNP	G	G	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	9	96857666	96857666	G	T	SNP	PTPDC1	ENST00000375360	human	ensembl	74_37	+1	known	silent	c.522	p.V174	1.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	PTPDC1	HGNC	ENSG00000158079				172	0	0	185	25	11.9048
MT-ND5	0	genome.wustl.edu	37	MT	12818	12818	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	MT	12818	12818	G	A	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.482	p.R161Q	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786				235	0	0	68	180	72.5806
MT-RNR2	0	genome.wustl.edu	37	MT	2573	2573	+	RNA	SNP	G	G	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	MT	2573	2573	G	A	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082				264	0	0	143	72	33.4884
MT-ATP6	0	genome.wustl.edu	37	MT	9117	9117	+	Silent	SNP	T	T	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	MT	9117	9117	T	C	SNP	MT-ATP6	ENST00000361899	human	ensembl	74_37	+1	known	silent	c.591	p.I197	NULL	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	-	no_errors	MT-ATP6	HGNC	ENSG00000198899				234	0	0	38	228	85.7143
AFF2	0	genome.wustl.edu	37	X	148044423	148044423	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	148044423	148044423	A	C	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.2869	p.T957P	0.899	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				81	0	0	35	28	44.4444
DMD	0	genome.wustl.edu	37	X	32591740	32591740	+	Silent	SNP	T	T	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	32591740	32591740	T	G	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	silent	c.1719	p.A573	0.125	smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				116	0	0	75	4	5.06329
ARAF	0	genome.wustl.edu	37	X	47429313	47429313	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	47429313	47429313	C	T	SNP	ARAF	ENST00000377045	human	ensembl	74_37	+1	known	nonsense	c.1441	p.Q481*	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	ARAF	HGNC	ENSG00000078061				28	0	0	9	3	25
GRIPAP1	0	genome.wustl.edu	37	X	48839839	48839839	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	48839839	48839839	C	T	SNP	GRIPAP1	ENST00000376441	human	ensembl	74_37	-1	known	missense	c.1286	p.R429Q	1.000	NULL	superfamily_Prefoldin	-	no_errors	GRIPAP1	HGNC	ENSG00000068400				137	0	0	86	5	5.49451
AR	0	genome.wustl.edu	37	X	66765158	66765158	+	Missense_Mutation	SNP	T	T	A			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	66765158	66765158	T	A	SNP	AR	ENST00000374690	human	ensembl	74_37	+1	known	missense	c.170	p.L57Q	0.929	pfam_Andrgn_rcpt	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	AR	HGNC	ENSG00000169083				68	0	0	49	4	7.54717
NUP210L	0	genome.wustl.edu	37	1	153991488	153991488	+	Frame_Shift_Del	DEL	G	G	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	153991488	153991488	G	-	DEL	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	frame_shift_del	c.4574	p.T1525fs	0.997	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552				99	0	0	101	16	13.6752
TMEM51	0	genome.wustl.edu	37	1	15541793	15541794	+	Frame_Shift_Ins	INS	-	-	G			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	1	15541793	15541794	-	G	INS	TMEM51	ENST00000376008	human	ensembl	74_37	+1	known	frame_shift_ins	c.210_211	p.A71fs	0.198:1.000	NULL	NULL	-	no_errors	TMEM51	HGNC	ENSG00000171729				194	0	0	132	21	13.7255
BMPR1A	0	genome.wustl.edu	37	10	88659639	88659640	+	Frame_Shift_Ins	INS	-	-	TGTCA			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	10	88659639	88659640	-	TGTCA	INS	BMPR1A	ENST00000372037	human	ensembl	74_37	+1	known	frame_shift_ins	c.422_423	p.I143fs	0.943:0.913	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR1A	HGNC	ENSG00000107779				110	0	0	75	6	7.40741
SLITRK1	0	genome.wustl.edu	37	13	84454800	84454800	+	Frame_Shift_Del	DEL	A	A	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	13	84454800	84454800	A	-	DEL	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	frame_shift_del	c.843	p.F281fs	0.995	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235				83	0	0	64	8	11.1111
ADAM21P1	0	genome.wustl.edu	37	14	70713986	70713986	+	RNA	DEL	C	C	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	14	70713986	70713986	C	-	DEL	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.553	-	-	-	no_errors	ADAM21P1	HGNC	ENSG00000235812				137	0	0	113	11	8.87097
ABCB8	0	genome.wustl.edu	37	7	150730702	150730726	+	Frame_Shift_Del	DEL	GGCTACCGCAGCTCCTCCCTCCTCC	GGCTACCGCAGCTCCTCCCTCCTCC	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	GGCTACCGCAGCTCCTCCCTCCTCC	GGCTACCGCAGCTCCTCCCTCCTCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	7	150730702	150730726	GGCTACCGCAGCTCCTCCCTCCTCC	-	DEL	ABCB8	ENST00000297504	human	ensembl	74_37	+1	known	frame_shift_del	c.157_181	p.Y54fs	0.070:0.059:0.038:0.004:0.000:0.000:0.000:0.000:0.001:0.007:0.194:0.244:0.256:0.282:0.264:0.033:0.001:0.043:0.058:0.057:0.033:0.048:0.049:0.041:0.027	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB8	HGNC	ENSG00000197150				148	0	0	133	17	11.3333
SOX3	0	genome.wustl.edu	37	X	139586495	139586515	+	In_Frame_Del	DEL	GCGGCCGCGGCAGCGGCGGCG	GCGGCCGCGGCAGCGGCGGCG	-			TCGA-KB-A6F7-01A-12D-A32N-08	TCGA-KB-A6F7-10A-01D-A32N-08	GCGGCCGCGGCAGCGGCGGCG	GCGGCCGCGGCAGCGGCGGCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2fb0e70b-57ff-42ee-9c19-7fc6ce8ed085	ea38bb47-262a-449f-ab5f-18e4292c38ef	X	139586495	139586515	GCGGCCGCGGCAGCGGCGGCG	-	DEL	SOX3	ENST00000370536	human	ensembl	74_37	-1	known	in_frame_del	c.731_711	p.AAAAAAA241in_frame_del	0.006:0.010:0.011:0.012:0.014:0.000:0.003:0.006:0.002:0.002:0.001:0.000:0.000:0.001:0.006:0.009:0.008:0.000:0.000:0.000:0.001	pfam_TF_SOX	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX3	HGNC	ENSG00000134595				25	0	0	9	12	57.1429
