Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACADM	0	genome.wustl.edu	37	1	76226868	76226868	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	76226868	76226868	G	A	SNP	ACADM	ENST00000420607	human	ensembl	74_37	+1	known	missense	c.1019	p.S340N	1.000	pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCo_DH/oxidase_C	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACADM	HGNC	ENSG00000117054	tier1	-	-	151	0	0.00	202	15	6.88
ACAN	0	genome.wustl.edu	37	15	89417157	89417157	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	15	89417157	89417157	G	T	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	missense	c.7418	p.R2473L	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766				50	0	0.00	73	6	7.59
ANKS3	0	genome.wustl.edu	37	16	4748884	4748884	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	16	4748884	4748884	G	A	SNP	ANKS3	ENST00000304283	human	ensembl	74_37	-1	known	missense	c.1468	p.R490C	1.000	superfamily_SAM/pointed	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS3	HGNC	ENSG00000168096	tier1	-	-	57	0	0.00	77	9	10.47
ANO5	0	genome.wustl.edu	37	11	22257799	22257799	+	Missense_Mutation	SNP	T	T	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	11	22257799	22257799	T	A	SNP	ANO5	ENST00000324559	human	ensembl	74_37	+1	known	missense	c.739	p.S247T	0.014	NULL	pfam_Anoctamin	-	no_errors	ANO5	HGNC	ENSG00000171714	tier1	-	-	89	0	0.00	102	14	11.97
APC	0	genome.wustl.edu	37	5	112157596	112157596	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	5	112157596	112157596	C	T	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.1316	p.P439L	1.000	superfamily_ARM-type_fold	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1	-	-	81	0	0.00	111	14	11.20
APCDD1L	0	genome.wustl.edu	37	20	57042206	57042206	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	20	57042206	57042206	G	T	SNP	APCDD1L	ENST00000439429	human	ensembl	74_37	-1	known	missense	c.730	p.H244N	0.996	NULL	NULL	-	no_errors	APCDD1L	HGNC	ENSG00000198768	tier1	-	-	36	0	0.00	69	10	12.66
ASTN1	0	genome.wustl.edu	37	1	177001757	177001757	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	177001757	177001757	G	A	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	missense	c.700	p.R234W	1.000	NULL	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092	tier1	-	-	74	0	0.00	91	7	7.14
BAI3	0	genome.wustl.edu	37	6	69653726	69653726	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	6	69653726	69653726	C	A	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.1035	p.H345Q	1.000	superfamily_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	127	0	0.00	156	13	7.69
BCL7A	0	genome.wustl.edu	37	12	122492799	122492799	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	12	122492799	122492799	G	A	SNP	BCL7A	ENST00000538010	human	ensembl	74_37	+1	known	silent	c.528	p.S176	0.016	NULL	pfam_BCL7	-	no_errors	BCL7A	HGNC	ENSG00000110987	tier1	-	-	113	0	0.00	183	11	5.64
C12orf54	0	genome.wustl.edu	37	12	48881831	48881831	+	RNA	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	12	48881831	48881831	G	A	SNP	C12orf54	ENST00000548913	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	C12orf54	HGNC	ENSG00000177627	tier1	-	-	39	0	0.00	39	4	9.30
C1orf173	0	genome.wustl.edu	37	1	75038610	75038610	+	Silent	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	75038610	75038610	C	T	SNP	C1orf173	ENST00000326665	human	ensembl	74_37	-1	known	silent	c.2784	p.S928	0.000	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965	tier1	-	-	142	0	0.00	212	15	6.58
C20orf112	0	genome.wustl.edu	37	20	31062420	31062420	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	20	31062420	31062420	G	A	SNP	C20orf112	ENST00000359676	human	ensembl	74_37	-1	known	silent	c.93	p.L31	1.000	NULL	NULL	-	no_errors	C20orf112	HGNC	ENSG00000197183	tier1	-	-	43	0	0.00	91	6	6.19
C22orf29	0	genome.wustl.edu	37	22	19839752	19839752	+	Silent	SNP	A	A	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	22	19839752	19839752	A	T	SNP	C22orf29	ENST00000328554	human	ensembl	74_37	-1	known	silent	c.33	p.P11	0.512	NULL	NULL	-	no_errors	C22orf29	HGNC	ENSG00000215012	tier1	-	-	100	0	0.00	165	17	9.24
C6orf165	0	genome.wustl.edu	37	6	88125515	88125515	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	6	88125515	88125515	G	A	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	missense	c.395	p.R132Q	1.000	NULL	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514	tier1	-	-	94	0	0.00	144	12	7.69
CA4	0	genome.wustl.edu	37	17	58234043	58234043	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	17	58234043	58234043	C	A	SNP	CA4	ENST00000300900	human	ensembl	74_37	+1	known	missense	c.235	p.Q79K	0.002	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA4	HGNC	ENSG00000167434	tier1	-	-	64	0	0.00	100	8	7.41
CADM1	0	genome.wustl.edu	37	11	115111138	115111138	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	11	115111138	115111138	C	T	SNP	CADM1	ENST00000452722	human	ensembl	74_37	-1	known	missense	c.127	p.D43N	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like_dom	-	no_errors	CADM1	HGNC	ENSG00000182985	tier1	-	-	75	0	0.00	104	11	9.57
CASZ1	0	genome.wustl.edu	37	1	10707901	10707901	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	10707901	10707901	C	T	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	missense	c.3454	p.A1152T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	tier1	-	-	83	0	0.00	111	13	10.48
CD163	0	genome.wustl.edu	37	12	7639270	7639270	+	Silent	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	12	7639270	7639270	G	T	SNP	CD163	ENST00000359156	human	ensembl	74_37	-1	known	silent	c.2283	p.G761	1.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	CD163	HGNC	ENSG00000177575	tier1	-	-	192	0	0.00	248	28	10.14
CD163	0	genome.wustl.edu	37	12	7639374	7639374	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	12	7639374	7639374	G	A	SNP	CD163	ENST00000359156	human	ensembl	74_37	-1	known	missense	c.2179	p.R727C	0.983	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	CD163	HGNC	ENSG00000177575	tier1	-	-	136	0	0.00	130	13	9.03
CHGB	0	genome.wustl.edu	37	20	5903729	5903729	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	20	5903729	5903729	G	T	SNP	CHGB	ENST00000378961	human	ensembl	74_37	+1	known	missense	c.939	p.E313D	0.882	pfam_Granin	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGB	HGNC	ENSG00000089199	tier1	-	-	56	0	0.00	91	8	8.08
CHRNA9	0	genome.wustl.edu	37	4	40351378	40351381	+	Frame_Shift_Del	DEL	TTCA	TTCA	-			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	TTCA	TTCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	4	40351378	40351381	TTCA	0	DEL	CHRNA9	ENST00000310169	human	ensembl	74_37	+1	known	frame_shift_del	c.845_848	p.F282fs	1.000:1.000:1.000:1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA9	HGNC	ENSG00000174343				184	0	0.00	255	14	5.20
CLASP2	0	genome.wustl.edu	37	3	33600816	33600816	+	Nonsense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	3	33600816	33600816	G	A	SNP	CLASP2	ENST00000399362	human	ensembl	74_37	-1	known	nonsense	c.3013	p.Q1005*	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC	ENSG00000163539				13	0	0.00	25	4	13.79
CMTM5	0	genome.wustl.edu	37	14	23848306	23848306	+	Silent	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	14	23848306	23848306	C	A	SNP	CMTM5	ENST00000339180	human	ensembl	74_37	+1	known	silent	c.547	p.R183	0.994	NULL	NULL	-	no_errors	CMTM5	HGNC	ENSG00000166091	tier1	-	-	68	0	0.00	84	6	6.67
COG8	0	genome.wustl.edu	37	16	69366683	69366683	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	16	69366683	69366683	G	A	SNP	COG8	ENST00000306875	human	ensembl	74_37	-1	known	missense	c.1516	p.L506F	1.000	pirsf_COG8_Metazoal_Plant	pfam_COG8,superfamily_Cullin_repeat-like_dom,pirsf_COG8_Metazoal_Plant	-	no_errors	COG8	HGNC	ENSG00000213380	tier1	-	-	107	0	0.00	135	11	7.48
CSMD1	0	genome.wustl.edu	37	8	2944798	2944798	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	8	2944798	2944798	C	A	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.7298	p.C2433F	1.000	superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	179	0	0.00	207	35	14.34
CSTF1	0	genome.wustl.edu	37	20	54972428	54972428	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	20	54972428	54972428	G	A	SNP	CSTF1	ENST00000217109	human	ensembl	74_37	+1	known	missense	c.335	p.R112H	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CSTF1	HGNC	ENSG00000101138	tier1	-	-	249	0	0.00	334	40	10.67
DENND3	0	genome.wustl.edu	37	8	142176444	142176444	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	8	142176444	142176444	C	T	SNP	DENND3	ENST00000262585	human	ensembl	74_37	+1	known	missense	c.1469	p.S490L	0.522	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_WD40_repeat,pfam_uDENN_dom,superfamily_WD40_repeat_dom,smart_DENN_dom,smart_dDENN_dom,smart_WD40_repeat,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_WD40_repeat_dom	-	no_errors	DENND3	HGNC	ENSG00000105339	tier1	-	-	107	0	0.00	147	23	13.53
DGKK	0	genome.wustl.edu	37	X	50213279	50213279	+	RNA	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	X	50213279	50213279	C	T	SNP	DGKK	ENST00000376025	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	DGKK	HGNC	ENSG00000204466	tier1	-	-	55	0	0.00	68	16	19.05
DLD	0	genome.wustl.edu	37	7	107557908	107557908	+	Splice_Site	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	7	107557908	107557908	G	A	SNP	DLD	ENST00000205402	human	ensembl	74_37	+1	known	splice_site	c.1236+1	e11+1	1.000	-	-	-	no_errors	DLD	HGNC	ENSG00000091140	tier1	-	-	95	0	0.00	144	13	8.28
DNAH2	0	genome.wustl.edu	37	17	7695607	7695607	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	17	7695607	7695607	G	A	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	missense	c.7091	p.R2364Q	0.391	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914	tier1	-	-	200	0	0.00	279	20	6.67
DNAH5	0	genome.wustl.edu	37	5	13766224	13766224	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	5	13766224	13766224	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.9962	p.R3321Q	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	113	0	0.00	165	36	17.65
DNAH5	0	genome.wustl.edu	37	5	13885290	13885290	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	5	13885290	13885290	C	A	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.2791	p.A931S	0.206	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	73	0	0.00	108	16	12.80
DNAI1	0	genome.wustl.edu	37	9	34514437	34514437	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	9	34514437	34514437	C	T	SNP	DNAI1	ENST00000242317	human	ensembl	74_37	+1	known	missense	c.1615	p.H539Y	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI1	HGNC	ENSG00000122735	tier1	-	-	137	0	0.00	198	19	8.76
DSCAM	0	genome.wustl.edu	37	21	41711119	41711119	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	21	41711119	41711119	G	A	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	silent	c.1434	p.D478	0.758	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587	tier1	-	-	73	0	0.00	87	6	6.45
ENSG00000161103	0	genome.wustl.edu	37	22	18844763	18844763	+	RNA	SNP	T	T	C			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	22	18844763	18844763	T	C	SNP	ENSG00000161103	ENST00000412938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103	tier1	rs199734135	-	21	0	0.00	21	5	19.23
ENSG00000204791	0	genome.wustl.edu	37	8	145106384	145106384	+	RNA	DEL	G	G	-			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	8	145106384	145106384	G	-	DEL	ENSG00000204791	ENST00000528912	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTD-3065J16.6	Clone_based_vega_gene	ENSG00000204791	tier1			20	0	0.00	40	6	13.04
ETV4	0	genome.wustl.edu	37	17	41606906	41606906	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	17	41606906	41606906	C	T	SNP	ETV4	ENST00000319349	human	ensembl	74_37	-1	known	missense	c.1094	p.R365Q	1.000	pfam_Ets_dom,smart_Ets_dom,prints_Ets_dom,pfscan_Ets_dom	pfam_ETS_PEA3_N,pfam_Ets_dom,smart_Ets_dom,prints_Ets_dom,pfscan_Ets_dom	-	no_errors	ETV4	HGNC	ENSG00000175832	tier1	-	-	67	0	0.00	86	6	6.45
GABRR1	0	genome.wustl.edu	37	6	89907861	89907861	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	6	89907861	89907861	G	A	SNP	GABRR1	ENST00000454853	human	ensembl	74_37	-1	known	silent	c.450	p.V150	0.906	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAa_rho1_rcpt,prints_Neur_channel,prints_GABAAa_rho_rcpt,tigrfam_Neur_channel	-	no_errors	GABRR1	HGNC	ENSG00000146276	tier1	-	-	417	0	0.00	528	49	8.46
GCOM1	0	genome.wustl.edu	37	15	57925903	57925903	+	Silent	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	15	57925903	57925903	C	T	SNP	GCOM1	ENST00000380569	human	ensembl	74_37	+1	known	silent	c.897	p.I299	0.529	NULL	NULL	-	no_errors	GCOM1	HGNC	ENSG00000137878	tier1	-	-	113	0	0.00	115	9	7.20
GDPGP1	0	genome.wustl.edu	37	15	90785031	90785031	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	15	90785031	90785031	G	A	SNP	GDPGP1	ENST00000329600	human	ensembl	74_37	+1	known	silent	c.891	p.P297	0.003	NULL	NULL	-	no_errors	GDPGP1	HGNC	ENSG00000183208	tier1	-	-	89	0	0.00	130	18	12.16
KIAA1033	0	genome.wustl.edu	37	12	105534782	105534782	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	12	105534782	105534782	C	T	SNP	KIAA1033	ENST00000332180	human	ensembl	74_37	+1	known	nonsense	c.1666	p.R556*	1.000	NULL	NULL	-	no_errors	KIAA1033	HGNC	ENSG00000136051	tier1	-	-	230	0	0.00	298	21	6.58
KRT72	0	genome.wustl.edu	37	12	52979836	52979836	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	12	52979836	52979836	C	A	SNP	KRT72	ENST00000293745	human	ensembl	74_37	-1	known	missense	c.1466	p.G489V	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT72	HGNC	ENSG00000170486	tier1	-	-	187	0	0.00	205	28	12.02
KRTAP19-3	0	genome.wustl.edu	37	21	31864198	31864198	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	21	31864198	31864198	G	A	SNP	KRTAP19-3	ENST00000334063	human	ensembl	74_37	-1	known	silent	c.78	p.G26	0.094	pfam_KRTAP_type6/8/16/19/20	pfam_KRTAP_type6/8/16/19/20	-	no_errors	KRTAP19-3	HGNC	ENSG00000244025	tier1	-	-	193	0	0.00	251	29	10.32
LILRA2	0	genome.wustl.edu	37	19	55085958	55085958	+	Silent	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	55085958	55085958	C	T	SNP	LILRA2	ENST00000251377	human	ensembl	74_37	+1	known	silent	c.261	p.I87	0.001	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA2	HGNC	ENSG00000239998	tier1	-	-	88	0	0.00	95	10	9.52
LIN7B	0	genome.wustl.edu	37	19	49619698	49619698	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	49619698	49619698	G	A	SNP	LIN7B	ENST00000221459	human	ensembl	74_37	+1	known	missense	c.407	p.R136H	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_Lin-7_homologue,pfscan_PDZ	pfam_PDZ,pfam_L27_C,superfamily_PDZ,smart_L27,smart_PDZ,pirsf_Lin-7_homologue,pfscan_L27,pfscan_PDZ	-	no_errors	LIN7B	HGNC	ENSG00000104863	tier1	-	-	41	0	0.00	75	10	11.63
LOC100293748	0	genome.wustl.edu	37	1	149261858	149261858	+	RNA	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	149261858	149261858	G	A	SNP	LOC100293748	ENST00000325963	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-403I13.4	Clone_based_vega_gene	ENSG00000223779	tier1	-	-	110	0	0.00	120	10	7.69
LTBP1	0	genome.wustl.edu	37	2	33505201	33505201	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	2	33505201	33505201	C	T	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	nonsense	c.3091	p.R1031*	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323	tier1	-	-	85	0	0.00	133	7	5.00
MAGEC3	0	genome.wustl.edu	37	X	140984483	140984483	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	X	140984483	140984483	C	G	SNP	MAGEC3	ENST00000536088	human	ensembl	74_37	+1	known	missense	c.45	p.D15E	0.001	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC3	HGNC	ENSG00000165509	tier1	-	-	56	0	0.00	74	18	19.57
MAGED1	0	genome.wustl.edu	37	X	51644767	51644767	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	X	51644767	51644767	G	A	SNP	MAGED1	ENST00000375695	human	ensembl	74_37	+1	known	missense	c.2246	p.R749H	1.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222	tier1	-	-	29	0	0.00	32	8	20.00
MAGI3	0	genome.wustl.edu	37	1	114225544	114225544	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	114225544	114225544	G	A	SNP	MAGI3	ENST00000307546	human	ensembl	74_37	+1	novel	silent	c.3354	p.S1118	0.998	NULL	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI3	HGNC	ENSG00000081026	tier1	-	-	87	0	0.00	87	13	13.00
MAK	0	genome.wustl.edu	37	6	10796390	10796390	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	6	10796390	10796390	G	A	SNP	MAK	ENST00000313243	human	ensembl	74_37	-1	known	silent	c.984	p.I328	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAK	HGNC	ENSG00000111837	tier1	-	-	74	0	0.00	109	6	5.22
MIR99B	0	genome.wustl.edu	37	19	52195895	52195895	+	RNA	SNP	G	G	C			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	52195895	52195895	G	C	SNP	MIR99B	ENST00000384819	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR99B	HGNC	ENSG00000207550	tier1	-	-	34	0	0.00	57	7	10.77
MTRF1L	0	genome.wustl.edu	37	6	153311053	153311053	+	Nonsense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	6	153311053	153311053	C	A	SNP	MTRF1L	ENST00000367233	human	ensembl	74_37	-1	known	nonsense	c.1120	p.E374*	1.000	NULL	pfam_Pep_chain_release_fac_I_II,pfam_PCRF,smart_PCRF	-	no_errors	MTRF1L	HGNC	ENSG00000112031	tier1	-	-	190	0	0.00	251	24	8.73
MUC16	0	genome.wustl.edu	37	19	9047581	9047581	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	9047581	9047581	C	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.34050	p.W11350C	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	258	0	0.00	295	30	9.23
N4BP3	0	genome.wustl.edu	37	5	177548112	177548112	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	5	177548112	177548112	G	T	SNP	N4BP3	ENST00000274605	human	ensembl	74_37	+1	known	missense	c.866	p.R289L	1.000	NULL	NULL	-	no_errors	N4BP3	HGNC	ENSG00000145911				22	0	0.00	29	4	12.12
NANS	0	genome.wustl.edu	37	9	100843130	100843130	+	Frame_Shift_Del	DEL	A	A	-			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	9	100843130	100843130	A	-	DEL	NANS	ENST00000210444	human	ensembl	74_37	+1	known	frame_shift_del	c.636	p.I212fs	0.970	pfam_Neu5Ac_N	pfam_Neu5Ac_N,pfam_SAF,superfamily_AFP_Neu5c_C,smart_SAF,pfscan_AFP_Neu5c_C,prints_Antifreeze_III	-	no_errors	NANS	HGNC	ENSG00000095380	tier1			178	0	0.00	244	33	11.91
NAT10	0	genome.wustl.edu	37	11	34137370	34137370	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	11	34137370	34137370	G	A	SNP	NAT10	ENST00000257829	human	ensembl	74_37	+1	known	missense	c.496	p.D166N	1.000	pfam_DUF1726	pfam_Helicase_dom,pfam_DUF1726,superfamily_Acyl_CoA_acyltransferase,superfamily_P-loop_NTPase,pfscan_GNAT_dom	-	no_errors	NAT10	HGNC	ENSG00000135372	tier1	-	-	112	0	0.00	147	13	8.12
NOVA1	0	genome.wustl.edu	37	14	26917965	26917965	+	Missense_Mutation	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	14	26917965	26917965	G	T	SNP	NOVA1	ENST00000539517	human	ensembl	74_37	-1	known	missense	c.724	p.Q242K	1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	NOVA1	HGNC	ENSG00000139910	tier1	-	-	143	0	0.00	191	19	9.05
OR14A16	0	genome.wustl.edu	37	1	247978534	247978534	+	Nonsense_Mutation	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	247978534	247978534	G	T	SNP	OR14A16	ENST00000357627	human	ensembl	74_37	-1	known	nonsense	c.498	p.Y166*	0.051	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14A16	HGNC	ENSG00000196772	tier1	-	-	124	0	0.00	145	12	7.64
OR4K17	0	genome.wustl.edu	37	14	20585590	20585590	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	14	20585590	20585590	C	A	SNP	OR4K17	ENST00000315543	human	ensembl	74_37	+1	known	missense	c.25	p.L9I	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K17	HGNC	ENSG00000176230	tier1	-	-	124	0	0.00	133	12	8.28
PCDHA4	0	genome.wustl.edu	37	5	140188792	140188792	+	Missense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	5	140188792	140188792	C	A	SNP	PCDHA4	ENST00000530339	human	ensembl	74_37	+1	known	missense	c.2020	p.Q674K	0.077	smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA4	HGNC	ENSG00000204967	tier1	-	-	96	0	0.00	99	6	5.71
PCDHB5	0	genome.wustl.edu	37	5	140517175	140517175	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	5	140517175	140517175	C	T	SNP	PCDHB5	ENST00000231134	human	ensembl	74_37	+1	known	missense	c.2159	p.S720L	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB5	HGNC	ENSG00000113209	tier1	-	-	203	0	0.00	291	59	16.81
PITPNC1	0	genome.wustl.edu	37	17	65688789	65688789	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	17	65688789	65688789	C	T	SNP	PITPNC1	ENST00000335257	human	ensembl	74_37	+1	known	missense	c.784	p.P262S	0.126	NULL	pfam_PI_transfer,prints_PI_transfer	-	no_errors	PITPNC1	HGNC	ENSG00000154217	tier1	-	-	103	0	0.00	168	12	6.67
POTEJ	0	genome.wustl.edu	37	2	131415084	131415084	+	Nonsense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	2	131415084	131415084	G	A	SNP	POTEJ	ENST00000409602	human	ensembl	74_37	+1	novel	nonsense	c.2751	p.W917*	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEJ	HGNC	ENSG00000222038	tier1	-	-	83	0	0.00	109	13	10.66
PPP6R1	0	genome.wustl.edu	37	19	55750783	55750783	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	55750783	55750783	C	T	SNP	PPP6R1	ENST00000412770	human	ensembl	74_37	-1	known	missense	c.1741	p.E581K	1.000	superfamily_ARM-type_fold	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R1	HGNC	ENSG00000105063	tier1	-	-	33	0	0.00	57	6	9.52
PRR23B	0	genome.wustl.edu	37	3	138738790	138738790	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	3	138738790	138738790	G	A	SNP	PRR23B	ENST00000329447	human	ensembl	74_37	-1	known	silent	c.714	p.C238	0.010	pfam_UPF0572	pfam_UPF0572	-	no_errors	PRR23B	HGNC	ENSG00000184814	tier1	-	-	29	0	0.00	38	13	25.49
PSMB11	0	genome.wustl.edu	37	14	23511762	23511762	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	14	23511762	23511762	C	T	SNP	PSMB11	ENST00000408907	human	ensembl	74_37	+1	known	missense	c.328	p.R110W	0.978	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB11	HGNC	ENSG00000222028	tier1	-	-	76	0	0.00	106	6	5.36
PTGER4	0	genome.wustl.edu	37	5	40681933	40681933	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	5	40681933	40681933	G	A	SNP	PTGER4	ENST00000302472	human	ensembl	74_37	+1	known	missense	c.838	p.V280M	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Prostanoid_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prost_EP4_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn,prints_Prostglndn_DP_rcpt	-	no_errors	PTGER4	HGNC	ENSG00000171522	tier1	-	-	84	0	0.00	116	59	33.71
RAP1GAP	0	genome.wustl.edu	37	1	21929382	21929382	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	21929382	21929382	G	A	SNP	RAP1GAP	ENST00000290101	human	ensembl	74_37	-1	known	missense	c.1645	p.P549S	1.000	NULL	pfam_Rap_GAP_dom,pfam_GoLoco_motif,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP	HGNC	ENSG00000076864	tier1	-	-	33	0	0.00	55	10	15.38
RASGRP1	0	genome.wustl.edu	37	15	38811509	38811509	+	Splice_Site	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	15	38811509	38811509	C	T	SNP	RASGRP1	ENST00000310803	human	ensembl	74_37	-1	known	splice_site	c.389+1	e4+1	1.000	-	-	-	no_errors	RASGRP1	HGNC	ENSG00000172575	tier1	-	-	88	0	0.00	138	15	9.80
RPL28	0	genome.wustl.edu	37	19	55899351	55899351	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	55899351	55899351	C	T	SNP	RPL28	ENST00000458349	human	ensembl	74_37	+1	known	missense	c.259	p.R87C	1.000	NULL	NULL	-	no_errors	RPL28	HGNC	ENSG00000108107	tier1	-	-	100	0	0.00	138	23	14.29
RSPH6A	0	genome.wustl.edu	37	19	46307603	46307603	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	46307603	46307603	G	A	SNP	RSPH6A	ENST00000221538	human	ensembl	74_37	-1	known	silent	c.1560	p.Y520	0.217	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941	tier1	-	-	41	0	0.00	53	9	14.52
RYR2	0	genome.wustl.edu	37	1	237754064	237754064	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	237754064	237754064	C	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.3926	p.A1309V	0.984	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	184	0	0.00	269	21	7.24
RYR2	0	genome.wustl.edu	37	1	237778116	237778116	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	237778116	237778116	G	C	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.5682	p.M1894I	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	48	0	0.00	72	6	7.59
SCG3	0	genome.wustl.edu	37	15	51974745	51974745	+	Silent	SNP	A	A	G			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	15	51974745	51974745	A	G	SNP	SCG3	ENST00000220478	human	ensembl	74_37	+1	known	silent	c.114	p.A38	1.000	NULL	NULL	-	no_errors	SCG3	HGNC	ENSG00000104112	tier1	-	-	164	0	0.00	169	16	8.60
SCUBE1	0	genome.wustl.edu	37	22	43617197	43617197	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	22	43617197	43617197	C	T	SNP	SCUBE1	ENST00000360835	human	ensembl	74_37	-1	known	missense	c.1531	p.A511T	0.000	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE1	HGNC	ENSG00000159307	tier1	-	-	34	0	0.00	60	11	15.49
SERPINI2	0	genome.wustl.edu	37	3	167189428	167189428	+	Silent	SNP	T	T	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	3	167189428	167189428	T	A	SNP	SERPINI2	ENST00000264677	human	ensembl	74_37	-1	known	silent	c.195	p.G65	1.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINI2	HGNC	ENSG00000114204	tier1	-	-	119	0	0.00	160	11	6.43
SETX	0	genome.wustl.edu	37	9	135158548	135158549	+	RNA	DEL	AA	AA	-			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	9	135158548	135158549	AA	-	DEL	SETX	ENST00000474172	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010:0.003	-	-	-	no_errors	SETX	HGNC	ENSG00000107290	tier1			12	0	0.00	17	2	10.53
SIN3B	0	genome.wustl.edu	37	19	16982065	16982065	+	Silent	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	16982065	16982065	C	T	SNP	SIN3B	ENST00000379803	human	ensembl	74_37	+1	known	silent	c.2544	p.Y848	1.000	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3B	HGNC	ENSG00000127511	tier1	-	-	106	0	0.00	160	16	9.09
SLC1A5	0	genome.wustl.edu	37	19	47285646	47285646	+	Missense_Mutation	SNP	A	A	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	47285646	47285646	A	T	SNP	SLC1A5	ENST00000542575	human	ensembl	74_37	-1	known	missense	c.818	p.I273N	1.000	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A5	HGNC	ENSG00000105281	tier1	-	-	31	0	0.00	78	8	9.20
SLC25A18	0	genome.wustl.edu	37	22	18064127	18064127	+	Silent	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	22	18064127	18064127	C	T	SNP	SLC25A18	ENST00000327451	human	ensembl	74_37	+1	known	silent	c.147	p.I49	0.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A18	HGNC	ENSG00000182902	tier1	-	-	114	0	0.00	148	8	5.13
SLC7A9	0	genome.wustl.edu	37	19	33350777	33350777	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	33350777	33350777	G	A	SNP	SLC7A9	ENST00000023064	human	ensembl	74_37	-1	known	silent	c.843	p.T281	0.519	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A9	HGNC	ENSG00000021488	tier1	-	-	44	0	0.00	47	5	9.62
SLC9A5	0	genome.wustl.edu	37	16	67300017	67300019	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	16	67300017	67300019	GAG	-	DEL	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	in_frame_del	c.2107_2109	p.E706in_frame_del	1.000:1.000:1.000	NULL	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740	tier1			44	0	0.00	45	4	8.16
SNORD114-6	0	genome.wustl.edu	37	14	101423526	101423526	+	RNA	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	14	101423526	101423526	G	A	SNP	SNORD114-6	ENST00000364393	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.978	-	-	-	no_errors	SNORD114-6	HGNC	ENSG00000201263	tier1	rs12432711	-	53	0	0.00	100	8	7.41
SOCS6	0	genome.wustl.edu	37	18	67993130	67993130	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	18	67993130	67993130	G	A	SNP	SOCS6	ENST00000397942	human	ensembl	74_37	+1	known	missense	c.1226	p.R409Q	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS6	HGNC	ENSG00000170677	tier1	-	-	88	0	0.00	132	18	12.00
SPICE1	0	genome.wustl.edu	37	3	113184531	113184531	+	Missense_Mutation	SNP	A	A	C			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	3	113184531	113184531	A	C	SNP	SPICE1	ENST00000295872	human	ensembl	74_37	-1	known	missense	c.1256	p.L419R	0.986	NULL	NULL	-	no_errors	SPICE1	HGNC	ENSG00000163611	tier1	-	-	117	0	0.00	181	12	6.22
SPTA1	0	genome.wustl.edu	37	1	158604389	158604389	+	Nonsense_Mutation	SNP	C	C	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	158604389	158604389	C	A	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	nonsense	c.5509	p.E1837*	0.999	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	218	0	0.00	191	16	7.73
STXBP1	0	genome.wustl.edu	37	9	130422319	130422319	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	9	130422319	130422319	C	G	SNP	STXBP1	ENST00000373299	human	ensembl	74_37	+1	known	missense	c.257	p.S86C	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	STXBP1	HGNC	ENSG00000136854	tier1	-	-	110	0	0.00	161	24	12.97
SYNE1	0	genome.wustl.edu	37	6	152647726	152647726	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	6	152647726	152647726	G	C	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.14998	p.Q5000E	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	86	0	0.00	77	12	13.48
SYTL1	0	genome.wustl.edu	37	1	27676289	27676289	+	RNA	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	27676289	27676289	G	T	SNP	SYTL1	ENST00000490170	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.274	-	-	-	no_errors	SYTL1	HGNC	ENSG00000142765	tier1	-	-	9	0	0.00	7	5	41.67
TCF7	0	genome.wustl.edu	37	5	133480497	133480497	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	5	133480497	133480497	C	T	SNP	TCF7	ENST00000432532	human	ensembl	74_37	+1	known	missense	c.740	p.S247L	1.000	NULL	pfam_HMG_box_dom,pfam_CTNNB1-bd_N,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7	HGNC	ENSG00000081059	tier1	-	-	55	0	0.00	73	8	9.88
TP53	0	genome.wustl.edu	37	17	7578413	7578413	+	Missense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	17	7578413	7578413	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.517	p.V173M	0.996	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	96	0	0.00	124	22	14.97
TRAF1	0	genome.wustl.edu	37	9	123686003	123686003	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	9	123686003	123686003	G	A	SNP	TRAF1	ENST00000373887	human	ensembl	74_37	-1	known	missense	c.208	p.R70C	0.956	pirsf_TNF_rcpt--assoc_TRAF	pfam_MATH,superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH	-	no_errors	TRAF1	HGNC	ENSG00000056558	tier1	-	-	170	0	0.00	226	32	12.36
TRPM8	0	genome.wustl.edu	37	2	234854618	234854618	+	Missense_Mutation	SNP	T	T	G			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	2	234854618	234854618	T	G	SNP	TRPM8	ENST00000324695	human	ensembl	74_37	+1	known	missense	c.818	p.V273G	0.112	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM8	HGNC	ENSG00000144481	tier1	-	-	122	0	0.00	191	14	6.76
UHRF1BP1L	0	genome.wustl.edu	37	12	100492156	100492156	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	12	100492156	100492156	G	A	SNP	UHRF1BP1L	ENST00000279907	human	ensembl	74_37	-1	known	missense	c.502	p.R168C	1.000	NULL	NULL	-	no_errors	UHRF1BP1L	HGNC	ENSG00000111647	tier1	-	-	110	0	0.00	139	15	9.68
VPS13C	0	genome.wustl.edu	37	15	62244050	62244050	+	Frame_Shift_Del	DEL	T	T	-			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	15	62244050	62244050	T	0	DEL	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	frame_shift_del	c.4429	p.I1477fs	0.829	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				82	0	0.00	128	13	9.22
WBP1	0	genome.wustl.edu	37	2	74687615	74687615	+	Missense_Mutation	SNP	G	G	C			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	2	74687615	74687615	G	C	SNP	WBP1	ENST00000233615	human	ensembl	74_37	+1	known	missense	c.617	p.R206P	0.998	NULL	pfam_Uncharacterised_WW-bd	-	no_errors	WBP1	HGNC	ENSG00000239779	tier1	-	-	184	0	0.00	250	22	8.09
WHSC1L1	0	genome.wustl.edu	37	8	38184277	38184277	+	Missense_Mutation	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	8	38184277	38184277	G	A	SNP	WHSC1L1	ENST00000317025	human	ensembl	74_37	-1	known	missense	c.1679	p.S560L	0.999	NULL	pfam_PWWP_dom,pfam_SET_dom,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	WHSC1L1	HGNC	ENSG00000147548	tier1	-	-	259	0	0.00	267	34	11.26
ZFYVE26	0	genome.wustl.edu	37	14	68220822	68220822	+	Missense_Mutation	SNP	C	C	G			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	14	68220822	68220822	C	G	SNP	ZFYVE26	ENST00000347230	human	ensembl	74_37	-1	known	missense	c.7094	p.G2365A	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE26	HGNC	ENSG00000072121	tier1	-	-	163	0	0.00	258	23	8.19
ZNF43	0	genome.wustl.edu	37	19	21992233	21992233	+	Nonsense_Mutation	SNP	G	G	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	21992233	21992233	G	T	SNP	ZNF43	ENST00000354959	human	ensembl	74_37	-1	known	nonsense	c.606	p.C202*	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF43	HGNC	ENSG00000198521	tier1	-	-	102	0	0.00	126	8	5.97
ZNF724P	0	genome.wustl.edu	37	19	23414153	23414153	+	Silent	SNP	G	G	A			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	23414153	23414153	G	A	SNP	ZNF724P	ENST00000597037	human	ensembl	74_37	-1	putative	silent	c.141	p.V47	0.170	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF724P	HGNC	ENSG00000196081	tier1	-	-	201	0	0.00	231	20	7.97
ZNF91	0	genome.wustl.edu	37	19	23543219	23543219	+	Nonsense_Mutation	SNP	G	G	C			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	19	23543219	23543219	G	C	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	nonsense	c.2562	p.Y854*	0.007	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232	tier1	-	-	89	0	0.00	97	6	5.83
ZSWIM8	0	genome.wustl.edu	37	10	75559662	75559663	+	RNA	INS	-	-	TCTA			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	10	75559662	75559663	-	TCTA	INS	ZSWIM8	ENST00000603840	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	ZSWIM8	HGNC	ENSG00000214655	tier1			10	0	0.00	9	4	30.77
ZYG11B	0	genome.wustl.edu	37	1	53282280	53282280	+	Nonsense_Mutation	SNP	C	C	T			TCGA-KB-A93G-01A-11D-A397-08	TCGA-KB-A93G-10A-01D-A39A-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	471ebfde-5751-4c84-acf4-318d1a278c5a	7b593993-2f70-47d3-bcec-a2a553bd8313	1	53282280	53282280	C	T	SNP	ZYG11B	ENST00000294353	human	ensembl	74_37	+1	known	nonsense	c.2023	p.Q675*	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	ZYG11B	HGNC	ENSG00000162378	tier1	-	-	167	0	0.00	148	22	12.94
