Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA2	0	genome.wustl.edu	37	9	139913367	139913367	+	Missense_Mutation	SNP	C	C	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	9	139913367	139913367	C	G	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	missense	c.1710	p.Q570H	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331	tier1	-	-	73	0	0.00	54	4	6.90
ACTBL2	0	genome.wustl.edu	37	5	56777862	56777862	+	Nonsense_Mutation	SNP	C	C	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	5	56777862	56777862	C	A	SNP	ACTBL2	ENST00000423391	human	ensembl	74_37	-1	known	nonsense	c.673	p.E225*	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTBL2	HGNC	ENSG00000169067	tier1	-	-	50	0	0.00	55	7	11.29
ADAMTS14	0	genome.wustl.edu	37	10	72517774	72517774	+	Silent	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	10	72517774	72517774	C	T	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	silent	c.3003	p.N1001	0.056	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316	tier1	-	-	65	0	0.00	70	7	9.09
ADCY8	0	genome.wustl.edu	37	8	131955666	131955666	+	Silent	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	8	131955666	131955666	C	T	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	silent	c.1284	p.T428	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	25	0	0.00	51	7	12.07
ALG1	0	genome.wustl.edu	37	16	5122072	5122073	+	Frame_Shift_Ins	INS	-	-	GTCT			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	16	5122072	5122073	-	GTCT	INS	ALG1	ENST00000591822	human	ensembl	74_37	+1	known	frame_shift_ins	c.222_223	p.W75fs	0.000:0.000	NULL	NULL	-	no_errors	ALG1	HGNC	ENSG00000033011	tier1			12	0	0.00	5	3	37.50
ANKRA2	0	genome.wustl.edu	37	5	72850780	72850780	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	5	72850780	72850780	C	T	SNP	ANKRA2	ENST00000296785	human	ensembl	74_37	-1	known	missense	c.644	p.R215Q	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRA2	HGNC	ENSG00000164331	tier1	-	-	108	0	0.00	111	14	11.20
ARID1A	0	genome.wustl.edu	37	1	27089594	27089594	+	Nonsense_Mutation	SNP	T	T	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	27089594	27089594	T	G	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	nonsense	c.2550	p.Y850*	0.965	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	tier1	-	-	53	0	0.00	43	22	33.85
ARPC5L	0	genome.wustl.edu	37	9	127639218	127639218	+	Frame_Shift_Del	DEL	A	A	-			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	9	127639218	127639218	A	-	DEL	ARPC5L	ENST00000259477	human	ensembl	74_37	+1	known	frame_shift_del	c.461	p.*154fs	1.000	NULL	pfam_ARP2/3_p16_Arc,superfamily_ARP2/3_p16_Arc	-	no_errors	ARPC5L	HGNC	ENSG00000136950	tier1			31	0	0.00	38	2	5.00
BAIAP3	0	genome.wustl.edu	37	16	1398101	1398101	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	16	1398101	1398101	G	A	SNP	BAIAP3	ENST00000324385	human	ensembl	74_37	+1	known	missense	c.3259	p.V1087M	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Munc13_subgr_dom-2,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	BAIAP3	HGNC	ENSG00000007516				19	0	0.00	31	5	13.89
BBS9	0	genome.wustl.edu	37	7	33312730	33312730	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	7	33312730	33312730	G	T	SNP	BBS9	ENST00000242067	human	ensembl	74_37	+1	known	missense	c.809	p.C270F	1.000	NULL	NULL	-	no_errors	BBS9	HGNC	ENSG00000122507	tier1	-	-	188	0	0.00	183	32	14.88
CACNA1B	0	genome.wustl.edu	37	9	140773613	140773613	+	Splice_Site	SNP	T	T	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	9	140773613	140773613	T	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	splice_site	c.390+2	e2+2	1.000	-	-	-	no_errors	CACNA1B	HGNC	ENSG00000148408				23	0	0.00	18	4	18.18
CD1E	0	genome.wustl.edu	37	1	158325181	158325181	+	Missense_Mutation	SNP	T	T	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	158325181	158325181	T	G	SNP	CD1E	ENST00000368167	human	ensembl	74_37	+1	known	missense	c.447	p.S149R	1.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1E	HGNC	ENSG00000158488	tier1	-	-	100	0	0.00	93	26	21.85
CDH1	0	genome.wustl.edu	37	16	68846050	68846050	+	Missense_Mutation	SNP	T	T	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	16	68846050	68846050	T	G	SNP	CDH1	ENST00000261769	human	ensembl	74_37	+1	known	missense	c.1021	p.Y341D	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	tier1	-	-	86	0	0.00	49	20	28.99
CDK5RAP2	0	genome.wustl.edu	37	9	123201862	123201862	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	9	123201862	123201862	G	A	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	silent	c.3537	p.Y1179	0.708	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861	tier1	-	-	54	0	0.00	44	16	26.67
CHD4	0	genome.wustl.edu	37	12	6696982	6696982	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	12	6696982	6696982	C	T	SNP	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	missense	c.3599	p.R1200Q	1.000	pfam_HDA_complex_subunit-2/3,superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642	tier1	-	-	74	0	0.00	83	11	11.70
CLEC9A	0	genome.wustl.edu	37	12	10205420	10205421	+	RNA	INS	-	-	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	12	10205420	10205421	-	T	INS	CLEC9A	ENST00000544751	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CLEC9A	HGNC	ENSG00000197992	tier1			15	0	0.00	17	2	10.53
COL5A2	0	genome.wustl.edu	37	2	189948711	189948711	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	2	189948711	189948711	G	A	SNP	COL5A2	ENST00000374866	human	ensembl	74_37	-1	known	missense	c.851	p.P284L	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL5A2	HGNC	ENSG00000204262	tier1	-	-	85	0	0.00	78	8	9.30
CRADD	0	genome.wustl.edu	37	12	94072587	94072587	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	12	94072587	94072587	C	T	SNP	CRADD	ENST00000332896	human	ensembl	74_37	+1	known	missense	c.37	p.R13C	1.000	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pfscan_CARD	pfam_CARD,pfam_Death_domain,superfamily_DEATH-like_dom,smart_CARD,smart_Death_domain,pfscan_CARD,pfscan_Death_domain	-	no_errors	CRADD	HGNC	ENSG00000169372	tier1	-	-	67	0	0.00	51	5	8.93
CROCCP2	0	genome.wustl.edu	37	1	16945358	16945358	+	RNA	SNP	G	G	C			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	16945358	16945358	G	C	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.110	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	tier1	rs945905	-	10	0	0.00	6	4	40.00
CTSE	0	genome.wustl.edu	37	1	206331081	206331081	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	206331081	206331081	C	T	SNP	CTSE	ENST00000361052	human	ensembl	74_37	+1	known	missense	c.1102	p.P368S	1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	CTSE	HGNC	ENSG00000196188	tier1	-	-	129	0	0.00	120	19	13.67
DEFB112	0	genome.wustl.edu	37	6	50011401	50011401	+	Silent	SNP	T	T	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	6	50011401	50011401	T	G	SNP	DEFB112	ENST00000322246	human	ensembl	74_37	-1	known	silent	c.229	p.R77	0.000	NULL	NULL	-	no_errors	DEFB112	HGNC	ENSG00000180872	tier1	-	-	90	0	0.00	95	16	14.41
DNAH5	0	genome.wustl.edu	37	5	13769140	13769140	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	5	13769140	13769140	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.9826	p.D3276N	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	206	0	0.00	190	17	8.21
DNAH5	0	genome.wustl.edu	37	5	13769135	13769135	+	Frame_Shift_Del	DEL	T	T	-			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	5	13769135	13769135	T	0	DEL	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	frame_shift_del	c.9831	p.A3278fs	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				194	0	0.00	182	14	7.14
DUOX1	0	genome.wustl.edu	37	15	45443390	45443390	+	Silent	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	15	45443390	45443390	G	T	SNP	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	silent	c.2958	p.L986	0.946	NULL	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857	tier1	-	-	77	0	0.00	68	5	6.85
EBF2	0	genome.wustl.edu	37	8	25898456	25898456	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	8	25898456	25898456	G	A	SNP	EBF2	ENST00000520164	human	ensembl	74_37	-1	known	silent	c.351	p.N117	0.787	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF2	HGNC	ENSG00000221818	tier1	-	-	86	0	0.00	88	8	8.33
EFCAB4B	0	genome.wustl.edu	37	12	3788223	3788223	+	Missense_Mutation	SNP	C	C	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	12	3788223	3788223	C	A	SNP	EFCAB4B	ENST00000440314	human	ensembl	74_37	-1	known	missense	c.382	p.A128S	0.014	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_EF_hand_dom,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,pfscan_EF_hand_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EFCAB4B	HGNC	ENSG00000130038	tier1	-	-	67	0	0.00	108	6	5.26
EFCAB6	0	genome.wustl.edu	37	22	43933363	43933363	+	Silent	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	22	43933363	43933363	C	T	SNP	EFCAB6	ENST00000262726	human	ensembl	74_37	-1	known	silent	c.3942	p.E1314	0.763	pfam_EF_hand_Ca-bd_contain_6	pfam_EF_hand_Ca-bd_contain_6,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB6	HGNC	ENSG00000186976	tier1	-	-	67	0	0.00	79	12	13.19
ENSG00000212884	0	genome.wustl.edu	37	GL000205.1	117481	117481	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	GL000205.1	117481	117481	G	A	SNP	ENSG00000212884	ENST00000391571	human	ensembl	74_37	+1	known	missense	c.112	p.V38M	NULL	pfam_D-isomer_2_OHA_DH_cat_dom	pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	AC011841.1	Clone_based_ensembl_gene	ENSG00000212884	tier1	-	-	33	0	0.00	44	5	10.20
ENSG00000267601	0	genome.wustl.edu	37	17	76851711	76851711	+	RNA	DEL	T	T	-			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	17	76851711	76851711	T	-	DEL	ENSG00000267601	ENST00000587434	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.655	-	-	-	no_errors	RP11-323N12.5	Clone_based_vega_gene	ENSG00000267601	tier1			18	0	0.00	17	2	10.53
ERC2	0	genome.wustl.edu	37	3	56044587	56044587	+	Nonsense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	3	56044587	56044587	G	A	SNP	ERC2	ENST00000288221	human	ensembl	74_37	-1	known	nonsense	c.1810	p.R604*	0.995	pfam_CAZ_cplx_RIM-bd_prot,superfamily_Prefoldin	pfam_CAZ_cplx_RIM-bd_prot,superfamily_Prefoldin	-	no_errors	ERC2	HGNC	ENSG00000187672	tier1	-	-	132	0	0.00	129	20	13.42
ETV4	0	genome.wustl.edu	37	17	41610701	41610701	+	Frame_Shift_Del	DEL	G	G	-			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	17	41610701	41610701	G	-	DEL	ETV4	ENST00000319349	human	ensembl	74_37	-1	known	frame_shift_del	c.399	p.R134fs	1.000	pfam_ETS_PEA3_N	pfam_ETS_PEA3_N,pfam_Ets_dom,smart_Ets_dom,prints_Ets_dom,pfscan_Ets_dom	-	no_errors	ETV4	HGNC	ENSG00000175832	tier1			29	0	0.00	31	2	6.06
EYA1	0	genome.wustl.edu	37	8	72128979	72128979	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	8	72128979	72128979	G	A	SNP	EYA1	ENST00000340726	human	ensembl	74_37	-1	known	silent	c.1308	p.F436	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC	ENSG00000104313	tier1	-	-	113	0	0.00	84	23	21.50
FLG	0	genome.wustl.edu	37	1	152286834	152286834	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	152286834	152286834	G	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.528	p.N176K	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	74	0	0.00	45	8	15.09
FPR3	0	genome.wustl.edu	37	19	52327880	52327880	+	Missense_Mutation	SNP	T	T	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	19	52327880	52327880	T	A	SNP	FPR3	ENST00000339223	human	ensembl	74_37	+1	known	missense	c.879	p.F293L	0.974	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt	-	no_errors	FPR3	HGNC	ENSG00000187474	tier1	-	-	194	0	0.00	155	35	18.42
GLYATL1	0	genome.wustl.edu	37	11	58711100	58711100	+	Missense_Mutation	SNP	A	A	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	11	58711100	58711100	A	G	SNP	GLYATL1	ENST00000300079	human	ensembl	74_37	+1	known	missense	c.109	p.I37V	0.012	NULL	pfam_Glycine_N-acyltransferase_N,pfam_Glycine_N-acyltransferase_C,superfamily_Acyl_CoA_acyltransferase	-	no_errors	GLYATL1	HGNC	ENSG00000166840	tier1	rs145329553	-	81	0	0.00	67	5	6.94
H2AFY2	0	genome.wustl.edu	37	10	71868928	71868929	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	10	71868928	71868929	AA	-	DEL	H2AFY2	ENST00000373255	human	ensembl	74_37	+1	known	frame_shift_del	c.918_919	p.K307fs	0.004:0.997	pfam_Macro_dom,smart_Macro_dom,pirsf_Core_histone_macro-H2A,pfscan_Macro_dom	pfam_Macro_dom,pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,smart_Macro_dom,pirsf_Core_histone_macro-H2A,pfscan_Macro_dom,prints_Histone_H2A	-	no_errors	H2AFY2	HGNC	ENSG00000099284	tier1			76	0	0.00	80	8	9.09
HEATR6	0	genome.wustl.edu	37	17	58147200	58147200	+	Missense_Mutation	SNP	A	A	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	17	58147200	58147200	A	T	SNP	HEATR6	ENST00000184956	human	ensembl	74_37	-1	known	missense	c.811	p.F271I	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR6	HGNC	ENSG00000068097	tier1	-	-	95	0	0.00	93	7	7.00
HEPH	0	genome.wustl.edu	37	X	65392220	65392220	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	X	65392220	65392220	C	T	SNP	HEPH	ENST00000519389	human	ensembl	74_37	+1	known	missense	c.353	p.S118F	0.180	superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPH	HGNC	ENSG00000089472	tier1	-	-	31	0	0.00	27	13	32.50
HTR5A	0	genome.wustl.edu	37	7	154862726	154862726	+	Silent	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	7	154862726	154862726	C	T	SNP	HTR5A	ENST00000287907	human	ensembl	74_37	+1	known	silent	c.117	p.F39	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT5A_rcpt,prints_5HT_rcpt	-	no_errors	HTR5A	HGNC	ENSG00000157219	tier1	-	-	69	0	0.00	49	6	10.91
KMT2D	0	genome.wustl.edu	37	12	49425038	49425038	+	Nonsense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	12	49425038	49425038	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	nonsense	c.13450	p.R4484*	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	96	0	0.00	90	20	18.18
KPNB1	0	genome.wustl.edu	37	17	45750505	45750505	+	Nonsense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	17	45750505	45750505	C	T	SNP	KPNB1	ENST00000290158	human	ensembl	74_37	+1	known	nonsense	c.1669	p.R557*	0.998	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,pfam_Armadillo,superfamily_ARM-type_fold,smart_Importin-beta_N,smart_Armadillo,pfscan_HEAT_type_2,pfscan_Importin-beta_N	-	no_errors	KPNB1	HGNC	ENSG00000108424	tier1	-	-	63	0	0.00	53	12	18.18
KRT77	0	genome.wustl.edu	37	12	53091600	53091600	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	12	53091600	53091600	G	T	SNP	KRT77	ENST00000553168	human	ensembl	74_37	-1	known	missense	c.709	p.Q237K	0.253	NULL	NULL	-	no_errors	KRT77	HGNC	ENSG00000189182	tier1	-	-	332	0	0.00	262	67	20.36
LAMA1	0	genome.wustl.edu	37	18	7080031	7080031	+	Silent	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	18	7080031	7080031	G	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	silent	c.288	p.P96	0.993	pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	67	0	0.00	67	12	15.19
LCA5	0	genome.wustl.edu	37	6	80203350	80203350	+	Nonsense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	6	80203350	80203350	G	A	SNP	LCA5	ENST00000369846	human	ensembl	74_37	-1	known	nonsense	c.838	p.R280*	0.005	NULL	NULL	-	no_errors	LCA5	HGNC	ENSG00000135338	tier1	-	-	54	0	0.00	47	12	20.34
LHX3	0	genome.wustl.edu	37	9	139092476	139092476	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	9	139092476	139092476	C	T	SNP	LHX3	ENST00000371746	human	ensembl	74_37	-1	known	missense	c.218	p.R73H	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX3	HGNC	ENSG00000107187	tier1	-	-	38	0	0.00	24	6	20.00
LRRN3	0	genome.wustl.edu	37	7	110763639	110763639	+	Missense_Mutation	SNP	C	C	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	7	110763639	110763639	C	A	SNP	LRRN3	ENST00000308478	human	ensembl	74_37	+1	known	missense	c.811	p.P271T	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN3	HGNC	ENSG00000173114	tier1	-	-	71	0	0.00	72	13	15.29
LTBP4	0	genome.wustl.edu	37	19	41128550	41128550	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	19	41128550	41128550	G	T	SNP	LTBP4	ENST00000308370	human	ensembl	74_37	+1	known	missense	c.3660	p.Q1220H	1.000	pfam_TB_dom,superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006	tier1	-	-	32	0	0.00	25	4	13.79
MBD6	0	genome.wustl.edu	37	12	57922320	57922320	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	12	57922320	57922320	G	A	SNP	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	missense	c.2797	p.G933R	0.958	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987	tier1	-	-	69	0	0.00	62	5	7.46
MEOX1	0	genome.wustl.edu	37	17	41738558	41738558	+	Missense_Mutation	SNP	T	T	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	17	41738558	41738558	T	A	SNP	MEOX1	ENST00000318579	human	ensembl	74_37	-1	known	missense	c.345	p.E115D	0.955	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	MEOX1	HGNC	ENSG00000005102	tier1	-	-	82	0	0.00	85	12	12.24
MLLT3	0	genome.wustl.edu	37	9	20414331	20414331	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	9	20414331	20414331	G	A	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	silent	c.513	p.S171	1.000	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843	tier1	rs10964556	-	58	0	0.00	67	6	8.22
MMRN1	0	genome.wustl.edu	37	4	90816173	90816173	+	Silent	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	4	90816173	90816173	C	T	SNP	MMRN1	ENST00000264790	human	ensembl	74_37	+1	known	silent	c.51	p.G17	0.089	NULL	pfam_C1q,pfam_EMI_domain,pfam_EG-like_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MMRN1	HGNC	ENSG00000138722	tier1	-	-	65	0	0.00	121	11	8.27
MRGPRX4	0	genome.wustl.edu	37	11	18195433	18195433	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	11	18195433	18195433	G	A	SNP	MRGPRX4	ENST00000314254	human	ensembl	74_37	+1	known	silent	c.630	p.P210	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRX4	HGNC	ENSG00000179817	tier1	-	-	64	0	0.00	54	14	20.59
MST1L	0	genome.wustl.edu	37	1	17083778	17083778	+	RNA	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	17083778	17083778	C	T	SNP	MST1L	ENST00000455405	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MST1L	HGNC	ENSG00000186715	tier1	rs28455793	-	18	0	0.00	13	5	27.78
MYH2	0	genome.wustl.edu	37	17	10440988	10440988	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	17	10440988	10440988	G	A	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.1581	p.I527	0.151	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	141	0	0.00	134	23	14.65
NDNF	0	genome.wustl.edu	37	4	121957512	121957512	+	Silent	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	4	121957512	121957512	G	T	SNP	NDNF	ENST00000379692	human	ensembl	74_37	-1	known	silent	c.1614	p.G538	0.922	pfam_DUF2369,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_DUF2369,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	NDNF	HGNC	ENSG00000173376	tier1	-	-	135	0	0.00	134	10	6.94
NOC2L	0	genome.wustl.edu	37	1	891584	891584	+	Silent	SNP	A	A	C			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	891584	891584	A	C	SNP	NOC2L	ENST00000327044	human	ensembl	74_37	-1	known	silent	c.498	p.T166	0.086	NULL	pfam_Noc2,superfamily_ARM-type_fold	-	no_errors	NOC2L	HGNC	ENSG00000188976	tier1	-	-	35	0	0.00	16	10	38.46
NRXN3	0	genome.wustl.edu	37	14	79423633	79423633	+	Missense_Mutation	SNP	A	A	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	14	79423633	79423633	A	G	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.2291	p.E764G	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	tier1	-	-	105	0	0.00	70	15	17.65
OR5F1	0	genome.wustl.edu	37	11	55761365	55761365	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	11	55761365	55761365	G	T	SNP	OR5F1	ENST00000278409	human	ensembl	74_37	-1	known	missense	c.737	p.T246K	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5F1	HGNC	ENSG00000149133	tier1	-	-	56	0	0.00	65	6	8.45
OSR1	0	genome.wustl.edu	37	2	19552930	19552930	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	2	19552930	19552930	G	A	SNP	OSR1	ENST00000272223	human	ensembl	74_37	-1	known	missense	c.637	p.R213W	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	OSR1	HGNC	ENSG00000143867	tier1	-	-	61	0	0.00	41	6	12.77
PCDH11X	0	genome.wustl.edu	37	X	91132451	91132451	+	Silent	SNP	C	C	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	X	91132451	91132451	C	A	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	silent	c.1212	p.I404	0.934	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	-	-	74	0	0.00	63	14	18.18
PCF11	0	genome.wustl.edu	37	11	82880538	82880538	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	11	82880538	82880538	G	T	SNP	PCF11	ENST00000298281	human	ensembl	74_37	+1	known	missense	c.3161	p.G1054V	1.000	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,smart_CID_dom	-	no_errors	PCF11	HGNC	ENSG00000165494				33	0	0.00	41	4	8.89
PCNX	0	genome.wustl.edu	37	14	71568858	71568858	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	14	71568858	71568858	G	A	SNP	PCNX	ENST00000304743	human	ensembl	74_37	+1	known	missense	c.5741	p.R1914Q	1.000	pfam_Pecanex	pfam_Pecanex	-	no_errors	PCNX	HGNC	ENSG00000100731	tier1	-	-	101	0	0.00	116	19	14.07
PDIA4	0	genome.wustl.edu	37	7	148716290	148716291	+	Splice_Site	INS	-	-	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	7	148716290	148716291	-	T	INS	PDIA4	ENST00000286091	human	ensembl	74_37	-1	known	splice_site_ins	c.270-2_270-1	e3-1	1.000:1.000	-	-	-	no_errors	PDIA4	HGNC	ENSG00000155660	tier1			68	0	0.00	82	9	9.89
PIGR	0	genome.wustl.edu	37	1	207105025	207105025	+	Nonsense_Mutation	SNP	C	C	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	207105025	207105025	C	A	SNP	PIGR	ENST00000356495	human	ensembl	74_37	-1	known	nonsense	c.2131	p.G711*	0.431	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PIGR	HGNC	ENSG00000162896	tier1	-	-	44	0	0.00	50	11	18.03
PKHD1	0	genome.wustl.edu	37	6	51914991	51914991	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	6	51914991	51914991	G	T	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.2243	p.A748E	0.150	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927	tier1	-	-	37	0	0.00	43	6	12.24
PPIG	0	genome.wustl.edu	37	2	170493029	170493029	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	2	170493029	170493029	G	A	SNP	PPIG	ENST00000260970	human	ensembl	74_37	+1	known	missense	c.1261	p.E421K	1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIG	HGNC	ENSG00000138398	tier1	-	-	55	0	0.00	33	21	38.89
PRAMEF10	0	genome.wustl.edu	37	1	12954984	12954984	+	Missense_Mutation	SNP	A	A	C			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	1	12954984	12954984	A	C	SNP	PRAMEF10	ENST00000235347	human	ensembl	74_37	-1	known	missense	c.299	p.L100R	0.067	NULL	NULL	-	no_errors	PRAMEF10	HGNC	ENSG00000187545	tier1	-	-	154	0	0.00	124	17	12.06
PRRT2	0	genome.wustl.edu	37	16	29825190	29825190	+	Missense_Mutation	SNP	C	C	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	16	29825190	29825190	C	A	SNP	PRRT2	ENST00000567659	human	ensembl	74_37	+1	known	missense	c.815	p.A272D	1.000	pfam_CD225/Dispanin_fam	pfam_CD225/Dispanin_fam	-	no_errors	PRRT2	HGNC	ENSG00000167371	tier1	-	-	77	0	0.00	48	9	15.79
PTPN11	0	genome.wustl.edu	37	12	112926888	112926888	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	12	112926888	112926888	G	T	SNP	PTPN11	ENST00000351677	human	ensembl	74_37	+1	known	missense	c.1508	p.G503V	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_SH2,smart_SH2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_SH2	-	no_errors	PTPN11	HGNC	ENSG00000179295	tier1	-	-	166	0	0.00	125	19	13.10
PTPRZ1	0	genome.wustl.edu	37	7	121608131	121608131	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	7	121608131	121608131	G	T	SNP	PTPRZ1	ENST00000393386	human	ensembl	74_37	+1	known	missense	c.251	p.G84V	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRZ1	HGNC	ENSG00000106278	tier1	-	-	111	0	0.00	126	14	10.00
PXDN	0	genome.wustl.edu	37	2	1670168	1670168	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	2	1670168	1670168	G	A	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	missense	c.1109	p.P370L	0.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508	tier1	-	-	55	0	0.00	35	7	16.67
RHO	0	genome.wustl.edu	37	3	129251504	129251504	+	Missense_Mutation	SNP	C	C	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	3	129251504	129251504	C	G	SNP	RHO	ENST00000296271	human	ensembl	74_37	+1	known	missense	c.825	p.I275M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Rhodopsin	pfam_GPCR_Rhodpsn,pfam_Rhodopsin_N,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Rhodopsin,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	RHO	HGNC	ENSG00000163914	tier1	-	-	69	0	0.00	35	10	22.22
RHOA	0	genome.wustl.edu	37	3	49413009	49413009	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	3	49413009	49413009	C	T	SNP	RHOA	ENST00000418115	human	ensembl	74_37	-1	known	missense	c.14	p.R5Q	1.000	superfamily_P-loop_NTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOA	HGNC	ENSG00000067560	tier1	rs11552758	-	136	0	0.00	80	16	16.67
RPS6KA6	0	genome.wustl.edu	37	X	83319382	83319382	+	Missense_Mutation	SNP	A	A	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	X	83319382	83319382	A	G	SNP	RPS6KA6	ENST00000262752	human	ensembl	74_37	-1	known	missense	c.2141	p.L714P	1.000	superfamily_Kinase-like_dom,pirsf_Ribosomal_S6_kinase_II	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA6	HGNC	ENSG00000072133	tier1	-	-	26	0	0.00	13	10	43.48
SACS	0	genome.wustl.edu	37	13	23912386	23912386	+	Nonsense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	13	23912386	23912386	G	A	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	nonsense	c.5629	p.R1877*	0.504	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	78	0	0.00	119	10	7.75
SART1	0	genome.wustl.edu	37	11	65732638	65732638	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	11	65732638	65732638	G	A	SNP	SART1	ENST00000312397	human	ensembl	74_37	+1	known	missense	c.503	p.R168Q	0.970	pfam_SART_1	pfam_SART_1	-	no_errors	SART1	HGNC	ENSG00000175467				33	0	0.00	18	2	10.00
SETBP1	0	genome.wustl.edu	37	18	42281519	42281519	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	18	42281519	42281519	G	T	SNP	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	missense	c.208	p.D70Y	1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217	tier1	-	-	60	0	0.00	72	14	16.28
SETD3	0	genome.wustl.edu	37	14	99927670	99927670	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	14	99927670	99927670	G	A	SNP	SETD3	ENST00000331768	human	ensembl	74_37	-1	known	silent	c.204	p.S68	0.958	NULL	pfam_Rubisco_LSMT_subst-bd,pfam_SET_dom,superfamily_Rubisco_LSMT_subst-bd	-	no_errors	SETD3	HGNC	ENSG00000183576	tier1	-	-	114	0	0.00	90	11	10.89
SIRPB1	0	genome.wustl.edu	37	20	1552398	1552398	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	20	1552398	1552398	C	T	SNP	SIRPB1	ENST00000381605	human	ensembl	74_37	-1	known	missense	c.719	p.R240H	0.887	pfscan_Ig-like_dom	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	SIRPB1	HGNC	ENSG00000101307	tier1	-	-	60	0	0.00	47	14	22.95
SLIT3	0	genome.wustl.edu	37	5	168233469	168233469	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	5	168233469	168233469	G	A	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	missense	c.917	p.P306L	1.000	pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347	tier1	-	-	76	0	0.00	54	8	12.90
SNORD116-8	0	genome.wustl.edu	37	15	25315642	25315642	+	RNA	SNP	T	T	C			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	15	25315642	25315642	T	C	SNP	SNORD116-8	ENST00000384365	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNORD116-8	HGNC	ENSG00000207093	tier1	-	-	231	0	0.00	187	36	16.14
STK31	0	genome.wustl.edu	37	7	23821101	23821101	+	Missense_Mutation	SNP	A	A	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	7	23821101	23821101	A	G	SNP	STK31	ENST00000355870	human	ensembl	74_37	+1	known	missense	c.2029	p.N677D	0.021	NULL	pfam_Tudor,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tudor,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Tudor,pfscan_Prot_kinase_dom	-	no_errors	STK31	HGNC	ENSG00000196335	tier1	-	-	48	0	0.00	51	8	13.56
TGFBR2	0	genome.wustl.edu	37	3	30713816	30713816	+	Missense_Mutation	SNP	A	A	G			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	3	30713816	30713816	A	G	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.1216	p.K406E	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1	-	-	170	0	0.00	132	64	32.49
TPTE	0	genome.wustl.edu	37	21	10907033	10907033	+	Missense_Mutation	SNP	G	G	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	21	10907033	10907033	G	T	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	missense	c.1528	p.L510I	0.998	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157				66	0	0.00	77	5	6.10
TRMT61B	0	genome.wustl.edu	37	2	29092561	29092562	+	Frame_Shift_Ins	INS	-	-	C			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	2	29092561	29092562	-	C	INS	TRMT61B	ENST00000306108	human	ensembl	74_37	-1	known	frame_shift_ins	c.583_582	p.K194fs	0.069:0.045	pfam_tRNA_MeTrfase_GCD14	pfam_tRNA_MeTrfase_GCD14,pfam_PCMT	-	no_errors	TRMT61B	HGNC	ENSG00000171103	tier1			115	0	0.00	81	17	17.35
TTN	0	genome.wustl.edu	37	2	179596487	179596487	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	2	179596487	179596487	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.13383	p.G4461	0.002	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	103	0	0.00	72	31	30.10
TTPAL	0	genome.wustl.edu	37	20	43108870	43108870	+	Silent	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	20	43108870	43108870	C	T	SNP	TTPAL	ENST00000262605	human	ensembl	74_37	+1	known	silent	c.231	p.D77	0.674	pfam_CRAL/TRIO_N_dom,superfamily_CRAL/TRIO_N_dom	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	-	no_errors	TTPAL	HGNC	ENSG00000124120	tier1	-	-	23	0	0.00	16	6	27.27
TUBA4A	0	genome.wustl.edu	37	2	220116796	220116798	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	2	220116796	220116798	AGA	-	DEL	TUBA4A	ENST00000248437	human	ensembl	74_37	-1	known	in_frame_del	c.160_158	p.F53in_frame_del	1.000:1.000:1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Alpha_tubulin,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Beta_tubulin,prints_Delta_tubulin	-	no_errors	TUBA4A	HGNC	ENSG00000127824	tier1			40	0	0.00	19	8	29.63
TYR	0	genome.wustl.edu	37	11	88924507	88924507	+	Missense_Mutation	SNP	A	A	C			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	11	88924507	88924507	A	C	SNP	TYR	ENST00000263321	human	ensembl	74_37	+1	known	missense	c.957	p.E319D	0.998	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498	tier1	-	-	128	0	0.00	136	25	15.53
UBE4A	0	genome.wustl.edu	37	11	118243366	118243366	+	Missense_Mutation	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	11	118243366	118243366	G	A	SNP	UBE4A	ENST00000431736	human	ensembl	74_37	+1	known	missense	c.706	p.A236T	1.000	NULL	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4A	HGNC	ENSG00000110344	tier1	-	-	172	0	0.00	156	16	9.30
USP6	0	genome.wustl.edu	37	17	5040981	5040981	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	17	5040981	5040981	G	A	SNP	USP6	ENST00000250066	human	ensembl	74_37	+1	known	silent	c.861	p.V287	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Peptidase_C19/C67,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP6	HGNC	ENSG00000129204	tier1	-	-	215	0	0.00	178	28	13.46
ZFAT	0	genome.wustl.edu	37	8	135524778	135524778	+	Missense_Mutation	SNP	C	C	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	8	135524778	135524778	C	T	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	missense	c.3301	p.V1101I	0.260	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827	tier1	-	-	155	0	0.00	183	25	12.02
ZFAT	0	genome.wustl.edu	37	8	135669961	135669961	+	Missense_Mutation	SNP	C	C	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	8	135669961	135669961	C	A	SNP	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	missense	c.39	p.M13I	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827	tier1	-	-	67	0	0.00	66	7	9.59
ZFP42	0	genome.wustl.edu	37	4	188924767	188924767	+	Missense_Mutation	SNP	A	A	T			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	4	188924767	188924767	A	T	SNP	ZFP42	ENST00000326866	human	ensembl	74_37	+1	known	missense	c.806	p.H269L	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP42	HGNC	ENSG00000179059	tier1	-	-	41	0	0.00	45	11	19.64
ZNF425	0	genome.wustl.edu	37	7	148801757	148801757	+	Silent	SNP	G	G	A			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	7	148801757	148801757	G	A	SNP	ZNF425	ENST00000378061	human	ensembl	74_37	-1	known	silent	c.1206	p.D402	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF425	HGNC	ENSG00000204947	tier1	-	-	110	0	0.00	96	9	8.57
ZNF461	0	genome.wustl.edu	37	19	37129850	37129850	+	Missense_Mutation	SNP	T	T	C			TCGA-R5-A804-01A-11D-A364-08	TCGA-R5-A804-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d8e93fce-5fad-4311-be4c-9b739b109ce4	a52c9c5b-86a3-4d4b-bd43-ed8d6f9d56ce	19	37129850	37129850	T	C	SNP	ZNF461	ENST00000588268	human	ensembl	74_37	-1	known	missense	c.1397	p.E466G	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF461	HGNC	ENSG00000197808	tier1	-	-	46	0	0.00	44	4	8.33
