Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA6	0	genome.wustl.edu	37	17	67101605	67101605	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	67101605	67101605	G	A	SNP	ABCA6	ENST00000284425	human	ensembl	74_37	-1	known	missense	c.2738	p.T913I	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA6	HGNC	ENSG00000154262	tier1	-	-	57	0	0.00	57	6	9.52
AKR1E2	0	genome.wustl.edu	37	10	4879677	4879677	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	10	4879677	4879677	G	A	SNP	AKR1E2	ENST00000298375	human	ensembl	74_37	+1	known	silent	c.486	p.G162	0.996	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1E2	HGNC	ENSG00000165568	tier1	-	-	137	0	0.00	105	8	7.08
ASPRV1	0	genome.wustl.edu	37	2	70188256	70188256	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	2	70188256	70188256	C	A	SNP	ASPRV1	ENST00000320256	human	ensembl	74_37	-1	known	missense	c.565	p.A189S	1.000	superfamily_Peptidase_aspartic_dom	pfam_Peptidase_aspartic_DDI1-type,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic_dom,pfscan_Peptidase_A2_cat	-	no_errors	ASPRV1	HGNC	ENSG00000244617	tier1	-	-	158	0	0.00	111	6	5.13
AUTS2	0	genome.wustl.edu	37	7	70231160	70231160	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	70231160	70231160	G	A	SNP	AUTS2	ENST00000342771	human	ensembl	74_37	+1	known	missense	c.1529	p.R510H	1.000	NULL	prints_AUTS2	-	no_errors	AUTS2	HGNC	ENSG00000158321	tier1	-	-	167	0	0.00	154	10	6.10
AXIN2	0	genome.wustl.edu	37	17	63553925	63553925	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	63553925	63553925	T	A	SNP	AXIN2	ENST00000307078	human	ensembl	74_37	-1	known	missense	c.814	p.R272W	1.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN2	HGNC	ENSG00000168646	tier1	-	-	119	0	0.00	81	5	5.81
B4GALNT4	0	genome.wustl.edu	37	11	376088	376088	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	376088	376088	C	T	SNP	B4GALNT4	ENST00000329962	human	ensembl	74_37	+1	known	silent	c.1110	p.F370	0.997	NULL	pfam_Chond_GalNAc,pfam_PA14,smart_PA14	-	no_errors	B4GALNT4	HGNC	ENSG00000182272	tier1	-	-	64	0	0.00	46	7	13.21
C3	0	genome.wustl.edu	37	19	6697435	6697435	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	6697435	6697435	C	T	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	missense	c.2716	p.G906S	0.992	NULL	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730	tier1	-	-	119	0	0.00	84	5	5.62
CAMK4	0	genome.wustl.edu	37	5	110560138	110560140	+	RNA	DEL	GCG	GCG	-			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	GCG	GCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	110560138	110560140	GCG	-	DEL	CAMK4	ENST00000509408	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.980:0.981:0.978	-	-	-	no_errors	CAMK4	HGNC	ENSG00000152495	tier1			40	0	0.00	23	2	8.00
CCDC7	0	genome.wustl.edu	37	10	32863356	32863356	+	Splice_Site	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	10	32863356	32863356	G	T	SNP	CCDC7	ENST00000277657	human	ensembl	74_37	+1	known	splice_site	c.1455-1	e17-1	1.000	-	-	-	no_errors	CCDC7	HGNC	ENSG00000216937	tier1	-	-	98	0	0.00	94	11	10.48
CCNK	0	genome.wustl.edu	37	14	99976738	99976738	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	14	99976738	99976738	G	T	SNP	CCNK	ENST00000389879	human	ensembl	74_37	+1	known	missense	c.1362	p.E454D	0.997	NULL	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNK	HGNC	ENSG00000090061	tier1	-	-	11	0	0.00	8	4	33.33
CDH9	0	genome.wustl.edu	37	5	26906901	26906901	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	26906901	26906901	G	T	SNP	CDH9	ENST00000231021	human	ensembl	74_37	-1	known	missense	c.570	p.N190K	0.980	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100	tier1	-	-	83	0	0.00	91	9	9.00
CHERP	0	genome.wustl.edu	37	19	16640580	16640580	+	Silent	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	16640580	16640580	T	C	SNP	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	silent	c.1008	p.Q336	0.994	NULL	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872	tier1	-	-	62	0	0.00	60	5	7.69
CHERP	0	genome.wustl.edu	37	19	16640583	16640583	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	16640583	16640583	C	T	SNP	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	silent	c.1005	p.Q335	1.000	NULL	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872	tier1	-	-	62	0	0.00	60	5	7.69
CYP11A1	0	genome.wustl.edu	37	15	74631601	74631601	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	15	74631601	74631601	G	A	SNP	CYP11A1	ENST00000268053	human	ensembl	74_37	-1	known	nonsense	c.1213	p.R405*	0.539	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_mitochondrial,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP11A1	HGNC	ENSG00000140459	tier1	-	-	77	0	0.00	61	9	12.86
DNAH9	0	genome.wustl.edu	37	17	11650936	11650936	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	11650936	11650936	A	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.6463	p.T2155S	0.445	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	91	0	0.00	85	9	9.57
DNAJB6	0	genome.wustl.edu	37	7	157177590	157177590	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	157177590	157177590	G	A	SNP	DNAJB6	ENST00000262177	human	ensembl	74_37	+1	known	missense	c.508	p.G170R	0.998	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB6	HGNC	ENSG00000105993	tier1	-	-	215	0	0.00	179	14	7.25
DZANK1	0	genome.wustl.edu	37	20	18414186	18414186	+	RNA	DEL	A	A	-			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	20	18414186	18414186	A	-	DEL	DZANK1	ENST00000460891	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	DZANK1	HGNC	ENSG00000089091	tier1			15	0	0.00	10	2	16.67
ELFN2	0	genome.wustl.edu	37	22	37770349	37770349	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	22	37770349	37770349	A	G	SNP	ELFN2	ENST00000402918	human	ensembl	74_37	-1	known	missense	c.1226	p.V409A	1.000	pfscan_LPXTG_anchor	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897	tier1	-	-	218	0	0.00	141	18	11.25
ELL2	0	genome.wustl.edu	37	5	95255186	95255186	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	95255186	95255186	T	C	SNP	ELL2	ENST00000237853	human	ensembl	74_37	-1	known	missense	c.259	p.N87D	1.000	pfam_RNA_pol_II_elong_fac_ELL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL2	HGNC	ENSG00000118985	tier1	-	-	183	0	0.00	147	14	8.70
ENSG00000259648	0	genome.wustl.edu	37	14	68082934	68082934	+	RNA	DEL	T	T	-			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	14	68082934	68082934	T	-	DEL	ENSG00000259648	ENST00000559968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RP11-643G16.4	Clone_based_vega_gene	ENSG00000259648	tier1			30	0	0.00	32	4	11.11
ENSG00000264057	0	genome.wustl.edu	37	17	62927379	62927379	+	RNA	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	62927379	62927379	A	G	SNP	ENSG00000264057	ENST00000583052	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-583F2.1	Clone_based_vega_gene	ENSG00000264057	tier1	-	-	95	0	0.00	92	7	7.07
ENSG00000265557	0	genome.wustl.edu	37	GL000231.1	21887	21887	+	RNA	SNP	C	C	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	GL000231.1	21887	21887	C	G	SNP	ENSG00000265557	ENST00000581649	human	ensembl	74_37	-1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors	CT867977.1	Clone_based_ensembl_gene	ENSG00000265557	tier1	-	-	14	0	0.00	9	4	26.67
EPB41L3	0	genome.wustl.edu	37	18	5416252	5416252	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	18	5416252	5416252	C	T	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	silent	c.1632	p.P544	0.000	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397	tier1	rs201925314	-	170	0	0.00	113	6	5.04
F13A1	0	genome.wustl.edu	37	6	6174842	6174842	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	6	6174842	6174842	G	A	SNP	F13A1	ENST00000264870	human	ensembl	74_37	-1	known	missense	c.1718	p.T573M	0.422	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	F13A1	HGNC	ENSG00000124491	tier1	rs113599940	-	240	0	0.00	193	13	6.31
FANCM	0	genome.wustl.edu	37	14	45658513	45658513	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	14	45658513	45658513	T	G	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.5288	p.F1763C	0.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	193	0	0.00	213	13	5.75
FN1	0	genome.wustl.edu	37	2	216251516	216251516	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	2	216251516	216251516	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.4508	p.S1503F	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414	tier1	-	-	95	0	0.00	78	8	9.30
FYCO1	0	genome.wustl.edu	37	3	46008078	46008078	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	3	46008078	46008078	G	A	SNP	FYCO1	ENST00000535325	human	ensembl	74_37	-1	known	silent	c.2748	p.T916	0.002	NULL	pfam_Znf_FYVE,pfam_Run,superfamily_GOLD,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Znf_FYVE,pfscan_GOLD,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	FYCO1	HGNC	ENSG00000163820	tier1	rs142981160	-	135	0	0.00	93	10	9.62
GGTLC1	0	genome.wustl.edu	37	20	23966510	23966510	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	20	23966510	23966510	C	A	SNP	GGTLC1	ENST00000278765	human	ensembl	74_37	-1	known	missense	c.406	p.A136S	1.000	pfam_GGT_peptidase,prints_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGTLC1	HGNC	ENSG00000149435	tier1	-	-	328	0	0.00	230	19	7.63
GPR116	0	genome.wustl.edu	37	6	46826342	46826342	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	6	46826342	46826342	C	T	SNP	GPR116	ENST00000265417	human	ensembl	74_37	-1	known	missense	c.3298	p.V1100I	0.942	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_SEA_dom,pfam_GPS_dom,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom,prints_GPCR_2_Ig-hepta_rcpt,prints_GPCR_2_secretin-like	-	no_errors	GPR116	HGNC	ENSG00000069122				91	0	0.00	77	7	8.33
HGS	0	genome.wustl.edu	37	17	79663723	79663723	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	79663723	79663723	G	A	SNP	HGS	ENST00000329138	human	ensembl	74_37	+1	known	silent	c.1653	p.K551	1.000	pirsf_Ubi-bd_Hrs_VPS27	pfam_VHS,pfam_HRS_helical,pfam_Znf_FYVE,superfamily_ENTH_VHS,superfamily_Znf_FYVE_PHD,smart_VHS_subgr,smart_Znf_FYVE,pirsf_Ubi-bd_Hrs_VPS27,pfscan_Ubiquitin-int_motif,pfscan_VHS,pfscan_Znf_FYVE-rel	-	no_errors	HGS	HGNC	ENSG00000185359	tier1	-	-	135	0	0.00	97	22	18.49
IFT74	0	genome.wustl.edu	37	9	26961993	26961993	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	9	26961993	26961993	G	A	SNP	IFT74	ENST00000380062	human	ensembl	74_37	+1	known	missense	c.28	p.A10T	0.007	NULL	NULL	-	no_errors	IFT74	HGNC	ENSG00000096872	tier1	-	-	153	0	0.00	130	13	9.09
ITGA5	0	genome.wustl.edu	37	12	54792385	54792385	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	12	54792385	54792385	C	T	SNP	ITGA5	ENST00000293379	human	ensembl	74_37	-1	known	missense	c.2939	p.R980H	0.168	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA5	HGNC	ENSG00000161638	tier1	rs145576475	-	92	0	0.00	46	9	16.36
KCNH4	0	genome.wustl.edu	37	17	40312390	40312390	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	40312390	40312390	G	C	SNP	KCNH4	ENST00000264661	human	ensembl	74_37	-1	known	missense	c.2722	p.L908V	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_fold,pfam_PAS_4,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH4	HGNC	ENSG00000089558	tier1	-	-	102	0	0.00	81	11	11.96
KCNIP2	0	genome.wustl.edu	37	10	103587926	103587926	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	10	103587926	103587926	G	A	SNP	KCNIP2	ENST00000461105	human	ensembl	74_37	-1	known	silent	c.624	p.D208	0.747	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	KCNIP2	HGNC	ENSG00000120049	tier1	-	-	228	0	0.00	182	27	12.80
KCNN2	0	genome.wustl.edu	37	5	113740271	113740271	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	113740271	113740271	G	A	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	missense	c.719	p.R240Q	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709	tier1	-	-	281	0	0.00	268	41	13.23
KCNQ3	0	genome.wustl.edu	37	8	133196524	133196524	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	133196524	133196524	G	A	SNP	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	nonsense	c.568	p.R190*	0.984	pfam_Ion_trans_dom,prints_K_chnl_volt-dep_KCNQ	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156	tier1	-	-	211	0	0.00	171	21	10.94
LACC1	0	genome.wustl.edu	37	13	44458068	44458068	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	13	44458068	44458068	C	T	SNP	LACC1	ENST00000325686	human	ensembl	74_37	+1	known	silent	c.903	p.H301	0.970	pfam_Cu_polyphenol_OxRdtase_Laccase,superfamily_Cytotoxic_necrot_fac-like_cat	pfam_Cu_polyphenol_OxRdtase_Laccase,superfamily_Cytotoxic_necrot_fac-like_cat	-	no_errors	LACC1	HGNC	ENSG00000179630	tier1	-	-	106	0	0.00	102	14	12.07
LRFN2	0	genome.wustl.edu	37	6	40400557	40400557	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	6	40400557	40400557	A	G	SNP	LRFN2	ENST00000338305	human	ensembl	74_37	-1	known	missense	c.296	p.L99P	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN2	HGNC	ENSG00000156564	tier1	-	-	65	0	0.00	78	7	8.24
LRRN2	0	genome.wustl.edu	37	1	204588474	204588474	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	204588474	204588474	C	T	SNP	LRRN2	ENST00000367175	human	ensembl	74_37	-1	known	missense	c.647	p.R216H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRN2	HGNC	ENSG00000170382	tier1	rs143481345	-	169	0	0.00	129	12	8.51
MAGEB6	0	genome.wustl.edu	37	X	26212038	26212038	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	X	26212038	26212038	C	T	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	silent	c.75	p.L25	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746	tier1	-	-	117	0	0.00	98	9	8.33
MARCH10	0	genome.wustl.edu	37	17	60813407	60813407	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	60813407	60813407	G	T	SNP	MARCH10	ENST00000311269	human	ensembl	74_37	-1	known	missense	c.1822	p.H608N	0.887	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH10	HGNC	ENSG00000173838	tier1	-	-	180	0	0.00	207	14	6.33
MED13	0	genome.wustl.edu	37	17	60028345	60028345	+	Silent	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	60028345	60028345	A	G	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	silent	c.6132	p.D2044	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510	tier1	-	-	95	0	0.00	90	6	6.25
MME	0	genome.wustl.edu	37	3	154802082	154802082	+	Silent	SNP	T	T	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	3	154802082	154802082	T	A	SNP	MME	ENST00000360490	human	ensembl	74_37	+1	known	silent	c.126	p.A42	0.911	NULL	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MME	HGNC	ENSG00000196549	tier1	-	-	204	0	0.00	196	11	5.31
MT-CO2	0	genome.wustl.edu	37	MT	8251	8251	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	MT	8251	8251	G	A	SNP	MT-CO2	ENST00000361739	human	ensembl	74_37	+1	known	silent	c.666	p.G222	NULL	pfscan_Cyt_c_oxidase_su2_C	pfam_Cyt_c_oxidase_su2_C,pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cupredoxin,superfamily_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	-	no_errors	MT-CO2	HGNC	ENSG00000198712	tier1	rs3021089	-	105	0	0.00	102	45	30.61
MT-RNR2	0	genome.wustl.edu	37	MT	1913	1913	+	RNA	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	MT	1913	1913	G	A	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	173	0	0.00	236	13	5.22
MUC17	0	genome.wustl.edu	37	7	100685182	100685182	+	Silent	SNP	C	C	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	100685182	100685182	C	G	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.10485	p.T3495	0.012	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	609	0	0.00	534	59	9.95
MUC6	0	genome.wustl.edu	37	11	1016417	1016417	+	Silent	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	1016417	1016417	G	C	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	silent	c.6384	p.S2128	0.001	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1	-	-	58	0	0.00	46	6	11.54
MYH2	0	genome.wustl.edu	37	17	10426500	10426500	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	10426500	10426500	C	T	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.5580	p.T1860	0.988	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	80	0	0.00	83	9	9.78
NLGN4X	0	genome.wustl.edu	37	X	5811186	5811186	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	X	5811186	5811186	T	C	SNP	NLGN4X	ENST00000381093	human	ensembl	74_37	-1	known	missense	c.2183	p.H728R	0.630	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC	ENSG00000146938	tier1	-	-	148	0	0.00	109	12	9.92
NSFL1C	0	genome.wustl.edu	37	20	1447411	1447411	+	Frame_Shift_Del	DEL	T	T	-			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	20	1447411	1447411	T	-	DEL	NSFL1C	ENST00000350991	human	ensembl	74_37	-1	known	frame_shift_del	c.59	p.E20fs	1.000	superfamily_UBA-like	pfam_SEP_domain,pfam_UBX,superfamily_SEP_domain,superfamily_UBA-like,smart_SEP_domain,smart_UBX,pfscan_UBX	-	no_errors	NSFL1C	HGNC	ENSG00000088833	tier1			10	0	0.00	4	2	33.33
PCDHB18	0	genome.wustl.edu	37	5	140616343	140616343	+	RNA	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	140616343	140616343	G	T	SNP	PCDHB18	ENST00000526308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001	tier1	-	-	315	0	0.00	329	19	5.46
PCNXL2	0	genome.wustl.edu	37	1	233394772	233394772	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	233394772	233394772	T	C	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	missense	c.836	p.E279G	1.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749	tier1	-	-	98	0	0.00	80	5	5.88
PRKCA	0	genome.wustl.edu	37	17	64492399	64492399	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	64492399	64492399	G	A	SNP	PRKCA	ENST00000413366	human	ensembl	74_37	+1	known	missense	c.286	p.D96N	1.000	pirsf_Protein_kinase_C_a/b/g	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCA	HGNC	ENSG00000154229	tier1	-	-	87	0	0.00	49	5	9.26
PRSS27	0	genome.wustl.edu	37	16	2763600	2763600	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	16	2763600	2763600	T	C	SNP	PRSS27	ENST00000302641	human	ensembl	74_37	-1	known	missense	c.608	p.Y203C	0.030	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS27	HGNC	ENSG00000172382	tier1	-	-	211	0	0.00	201	22	9.87
PRSS57	0	genome.wustl.edu	37	19	686959	686959	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	686959	686959	C	G	SNP	PRSS57	ENST00000329267	human	ensembl	74_37	-1	known	missense	c.611	p.R204P	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS57	HGNC	ENSG00000185198	tier1	-	-	119	0	0.00	79	8	9.20
PSMC5	0	genome.wustl.edu	37	17	61908692	61908692	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	61908692	61908692	C	T	SNP	PSMC5	ENST00000310144	human	ensembl	74_37	+1	known	silent	c.876	p.I292	1.000	pfam_ATPase_AAA_core,pfam_ATPase_AAA-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_AAA-2,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC5	HGNC	ENSG00000087191	tier1	-	-	546	0	0.00	550	38	6.46
PSMG2	0	genome.wustl.edu	37	18	12720616	12720616	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	18	12720616	12720616	T	C	SNP	PSMG2	ENST00000317615	human	ensembl	74_37	+1	known	missense	c.515	p.I172T	0.740	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	-	no_errors	PSMG2	HGNC	ENSG00000128789	tier1	-	-	56	0	0.00	49	13	20.97
RAG1	0	genome.wustl.edu	37	11	36596999	36596999	+	Silent	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	36596999	36596999	G	C	SNP	RAG1	ENST00000299440	human	ensembl	74_37	+1	known	silent	c.2145	p.V715	0.996	NULL	pfam_Znf_VDJ_recomb-activ_1,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RAG1	HGNC	ENSG00000166349	tier1	-	-	163	0	0.00	137	14	9.27
RIMS1	0	genome.wustl.edu	37	6	72892026	72892026	+	Silent	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	6	72892026	72892026	A	G	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	silent	c.852	p.G284	0.001	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841				108	0	0.00	63	4	5.97
RNA5SP283	0	genome.wustl.edu	37	9	66458154	66458155	+	RNA	INS	-	-	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	9	66458154	66458155	-	T	INS	RNA5SP283	ENST00000365604	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.044:0.046	-	-	-	no_errors	RNA5SP283	HGNC	ENSG00000202474	tier1			16	0	0.00	14	5	26.32
SCN4A	0	genome.wustl.edu	37	17	62045633	62045633	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	62045633	62045633	G	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.786	p.S262R	0.632	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314	tier1	-	-	207	0	0.00	171	16	8.56
SF3B1	0	genome.wustl.edu	37	2	198257052	198257052	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	2	198257052	198257052	C	T	SNP	SF3B1	ENST00000335508	human	ensembl	74_37	-1	known	missense	c.3890	p.R1297H	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524	tier1	-	-	88	0	0.00	76	5	6.17
SLC45A4	0	genome.wustl.edu	37	8	142222339	142222339	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	142222339	142222339	G	A	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.2258	p.T753M	0.001	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				73	0	0.00	50	4	7.41
SLC6A20	0	genome.wustl.edu	37	3	45812743	45812743	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	3	45812743	45812743	T	G	SNP	SLC6A20	ENST00000358525	human	ensembl	74_37	-1	known	missense	c.901	p.K301Q	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport_orphan	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A20	HGNC	ENSG00000163817	tier1	-	-	88	0	0.00	66	13	16.46
SMAD9	0	genome.wustl.edu	37	13	37453860	37453860	+	RNA	SNP	A	A	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	13	37453860	37453860	A	C	SNP	SMAD9	ENST00000483941	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SMAD9	HGNC	ENSG00000120693	tier1	-	-	62	0	0.00	81	5	5.81
SOWAHD	0	genome.wustl.edu	37	X	118893487	118893487	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	X	118893487	118893487	C	A	SNP	SOWAHD	ENST00000343905	human	ensembl	74_37	+1	known	nonsense	c.857	p.S286*	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SOWAHD	HGNC	ENSG00000187808	tier1	-	-	58	0	0.00	41	5	10.87
ST6GAL2	0	genome.wustl.edu	37	2	107460329	107460329	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	2	107460329	107460329	G	A	SNP	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	silent	c.105	p.P35	0.000	NULL	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057	tier1	-	-	104	0	0.00	92	10	9.80
SV2C	0	genome.wustl.edu	37	5	75427935	75427935	+	Silent	SNP	A	A	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	75427935	75427935	A	T	SNP	SV2C	ENST00000502798	human	ensembl	74_37	+1	known	silent	c.360	p.R120	0.000	superfamily_MFS_dom_general_subst_transpt,tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2C	HGNC	ENSG00000122012				98	0	0.00	64	9	12.16
TGFBR2	0	genome.wustl.edu	37	3	30715613	30715613	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	3	30715613	30715613	A	G	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.1346	p.Y449C	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1	-	-	91	0	0.00	77	6	7.23
TGFBR3	0	genome.wustl.edu	37	1	92182211	92182211	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	92182211	92182211	C	A	SNP	TGFBR3	ENST00000212355	human	ensembl	74_37	-1	known	nonsense	c.1621	p.E541*	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	TGFBR3	HGNC	ENSG00000069702	tier1	-	-	527	0	0.00	448	38	7.82
TM9SF2	0	genome.wustl.edu	37	13	100172328	100172328	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	13	100172328	100172328	C	A	SNP	TM9SF2	ENST00000376387	human	ensembl	74_37	+1	known	missense	c.278	p.S93Y	1.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF2	HGNC	ENSG00000125304	tier1	-	-	136	0	0.00	134	13	8.78
TMPRSS15	0	genome.wustl.edu	37	21	19704477	19704477	+	Silent	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	21	19704477	19704477	T	C	SNP	TMPRSS15	ENST00000284885	human	ensembl	74_37	-1	known	silent	c.1578	p.G526	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_MAM_dom,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_Peptidase_S1A_nudel,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_ConA-like_lec_gl_sf,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_MAM_dom,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,pfscan_SEA_dom,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS15	HGNC	ENSG00000154646	tier1	-	-	135	0	0.00	114	11	8.80
ZFHX4	0	genome.wustl.edu	37	8	77616425	77616425	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	77616425	77616425	A	C	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.102	p.K34N	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	75	0	0.00	64	15	18.99
ZFHX4	0	genome.wustl.edu	37	8	77765710	77765710	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	77765710	77765710	C	T	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	nonsense	c.6553	p.R2185*	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	159	0	0.00	114	13	10.24
ZFP2	0	genome.wustl.edu	37	5	178358966	178358966	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	178358966	178358966	G	C	SNP	ZFP2	ENST00000361362	human	ensembl	74_37	+1	known	missense	c.652	p.E218Q	0.998	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP2	HGNC	ENSG00000198939	tier1	-	-	109	0	0.00	94	7	6.93
ZNF471	0	genome.wustl.edu	37	19	57036484	57036484	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	57036484	57036484	G	A	SNP	ZNF471	ENST00000308031	human	ensembl	74_37	+1	known	missense	c.1048	p.E350K	0.039	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF471	HGNC	ENSG00000196263	tier1	-	-	129	0	0.00	146	14	8.70
ZNF518A	0	genome.wustl.edu	37	10	97920304	97920304	+	RNA	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	10	97920304	97920304	C	T	SNP	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.156	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853	tier1	-	-	95	0	0.00	105	14	11.76
ZNF600	0	genome.wustl.edu	37	19	53270996	53270996	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	53270996	53270996	C	A	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	missense	c.13	p.V5F	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190	tier1	-	-	326	0	0.00	339	28	7.63
ZNF697	0	genome.wustl.edu	37	1	120165477	120165477	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	120165477	120165477	C	T	SNP	ZNF697	ENST00000421812	human	ensembl	74_37	-1	known	missense	c.1489	p.E497K	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF697	HGNC	ENSG00000143067	tier1	-	-	46	0	0.00	42	5	10.20
AMY2B	0	genome.wustl.edu	37	1	104118116	104118116	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	104118116	104118116	G	A	SNP	AMY2B	ENST00000361355	human	ensembl	74_37	+1	known	missense	c.1055	p.R352Q	1.000	superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2B	HGNC	ENSG00000240038				369	0	0	346	34	8.94737
ZNF697	0	genome.wustl.edu	37	1	120165477	120165477	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	120165477	120165477	C	T	SNP	ZNF697	ENST00000421812	human	ensembl	74_37	-1	known	missense	c.1489	p.E497K	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF697	HGNC	ENSG00000143067				38	0	0	34	4	10.5263
OR10J3	0	genome.wustl.edu	37	1	159283838	159283838	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	159283838	159283838	G	A	SNP	OR10J3	ENST00000332217	human	ensembl	74_37	-1	known	silent	c.612	p.S204	0.004	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10J3	HGNC	ENSG00000196266				163	0	0	162	9	5.26316
SWT1	0	genome.wustl.edu	37	1	185144000	185144000	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	185144000	185144000	C	T	SNP	SWT1	ENST00000367500	human	ensembl	74_37	+1	known	missense	c.721	p.R241C	0.000	NULL	smart_PIN_dom	-	no_errors	SWT1	HGNC	ENSG00000116668				197	0	0	205	12	5.52995
LRRN2	0	genome.wustl.edu	37	1	204588474	204588474	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	204588474	204588474	C	T	SNP	LRRN2	ENST00000367175	human	ensembl	74_37	-1	known	missense	c.647	p.R216H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRN2	HGNC	ENSG00000170382				145	0	0	110	10	8.33333
PCNXL2	0	genome.wustl.edu	37	1	233394772	233394772	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	233394772	233394772	T	C	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	missense	c.836	p.E279G	1.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749				97	0	0	75	5	6.25
TGFBR3	0	genome.wustl.edu	37	1	92182211	92182211	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	1	92182211	92182211	C	A	SNP	TGFBR3	ENST00000212355	human	ensembl	74_37	-1	known	nonsense	c.1621	p.E541*	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	TGFBR3	HGNC	ENSG00000069702				462	0	0	377	31	7.59804
KCNIP2	0	genome.wustl.edu	37	10	103587926	103587926	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	10	103587926	103587926	G	A	SNP	KCNIP2	ENST00000461105	human	ensembl	74_37	-1	known	silent	c.624	p.D208	0.747	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	KCNIP2	HGNC	ENSG00000120049				201	0	0	161	24	12.973
CCDC7	0	genome.wustl.edu	37	10	32863356	32863356	+	Splice_Site	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	10	32863356	32863356	G	T	SNP	CCDC7	ENST00000277657	human	ensembl	74_37	+1	known	splice_site	c.1455-1	e17-1	1.000	-	-	-	no_errors	CCDC7	HGNC	ENSG00000216937				79	0	0	76	8	9.52381
AKR1E2	0	genome.wustl.edu	37	10	4879677	4879677	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	10	4879677	4879677	G	A	SNP	AKR1E2	ENST00000298375	human	ensembl	74_37	+1	known	silent	c.486	p.G162	0.996	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1E2	HGNC	ENSG00000165568				121	0	0	98	7	6.66667
ZNF518A	0	genome.wustl.edu	37	10	97920304	97920304	+	RNA	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	10	97920304	97920304	C	T	SNP	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.156	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853				85	0	0	97	11	10.1852
MUC6	0	genome.wustl.edu	37	11	1016417	1016417	+	Silent	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	1016417	1016417	G	C	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	silent	c.6384	p.S2128	0.001	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				56	0	0	45	5	10
TSSC2	0	genome.wustl.edu	37	11	3427885	3427885	+	RNA	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	3427885	3427885	A	G	SNP	TSSC2	ENST00000529482	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TSSC2	HGNC	ENSG00000223756				51	0	0	46	4	8
RAG1	0	genome.wustl.edu	37	11	36596999	36596999	+	Silent	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	36596999	36596999	G	C	SNP	RAG1	ENST00000299440	human	ensembl	74_37	+1	known	silent	c.2145	p.V715	0.996	NULL	pfam_Znf_VDJ_recomb-activ_1,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RAG1	HGNC	ENSG00000166349				138	0	0	118	12	9.23077
B4GALNT4	0	genome.wustl.edu	37	11	376088	376088	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	376088	376088	C	T	SNP	B4GALNT4	ENST00000329962	human	ensembl	74_37	+1	known	silent	c.1110	p.F370	0.997	NULL	pfam_Chond_GalNAc,pfam_PA14,smart_PA14	-	no_errors	B4GALNT4	HGNC	ENSG00000182272				54	0	0	43	7	14
TENM4	0	genome.wustl.edu	37	11	78381482	78381482	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	78381482	78381482	G	A	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.5908	p.R1970C	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				68	0	0	65	10	13.3333
MED17	0	genome.wustl.edu	37	11	93517701	93517701	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	93517701	93517701	C	T	SNP	MED17	ENST00000251871	human	ensembl	74_37	+1	known	missense	c.22	p.R8W	1.000	NULL	pfam_Mediator_Med17	-	no_errors	MED17	HGNC	ENSG00000042429				47	0	0	33	3	8.33333
GPD1	0	genome.wustl.edu	37	12	50499447	50499447	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	12	50499447	50499447	C	T	SNP	GPD1	ENST00000301149	human	ensembl	74_37	+1	known	silent	c.336	p.N112	0.029	pfam_G3P_DH_NAD-dep_N,pirsf_G3P_DH_NAD-dep,tigrfam_G3P_DH_NAD-dep_euk	pfam_G3P_DH_NAD-dep_N,pfam_G3P_DH_NAD-dep_C,superfamily_6-PGluconate_DH_C-like,pirsf_G3P_DH_NAD-dep,prints_G3P_DH_NAD-dep,tigrfam_G3P_DH_NAD-dep_euk	-	no_errors	GPD1	HGNC	ENSG00000167588				71	0	0	57	4	6.55738
ITGA5	0	genome.wustl.edu	37	12	54792385	54792385	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	12	54792385	54792385	C	T	SNP	ITGA5	ENST00000293379	human	ensembl	74_37	-1	known	missense	c.2939	p.R980H	0.168	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA5	HGNC	ENSG00000161638				83	0	0	38	6	13.6364
EEA1	0	genome.wustl.edu	37	12	93210150	93210150	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	12	93210150	93210150	C	G	SNP	EEA1	ENST00000322349	human	ensembl	74_37	-1	known	missense	c.1755	p.K585N	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Znf_C2H2	-	no_errors	EEA1	HGNC	ENSG00000102189				173	0	0	178	10	5.31915
TM9SF2	0	genome.wustl.edu	37	13	100172328	100172328	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	13	100172328	100172328	C	A	SNP	TM9SF2	ENST00000376387	human	ensembl	74_37	+1	known	missense	c.278	p.S93Y	1.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF2	HGNC	ENSG00000125304				113	0	0	106	9	7.82609
LACC1	0	genome.wustl.edu	37	13	44458068	44458068	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	13	44458068	44458068	C	T	SNP	LACC1	ENST00000325686	human	ensembl	74_37	+1	known	silent	c.903	p.H301	0.970	pfam_Cu_polyphenol_OxRdtase_Laccase,superfamily_Cytotoxic_necrot_fac-like_cat	pfam_Cu_polyphenol_OxRdtase_Laccase,superfamily_Cytotoxic_necrot_fac-like_cat	-	no_errors	LACC1	HGNC	ENSG00000179630				99	0	0	94	13	12.1495
FANCM	0	genome.wustl.edu	37	14	45658513	45658513	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	14	45658513	45658513	T	G	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.5288	p.F1763C	0.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790				163	0	0	177	11	5.85106
CYP11A1	0	genome.wustl.edu	37	15	74631601	74631601	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	15	74631601	74631601	G	A	SNP	CYP11A1	ENST00000268053	human	ensembl	74_37	-1	known	nonsense	c.1213	p.R405*	0.539	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_mitochondrial,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP11A1	HGNC	ENSG00000140459				64	0	0	55	7	11.2903
PRSS27	0	genome.wustl.edu	37	16	2763600	2763600	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	16	2763600	2763600	T	C	SNP	PRSS27	ENST00000302641	human	ensembl	74_37	-1	known	missense	c.608	p.Y203C	0.030	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS27	HGNC	ENSG00000172382				192	0	0	177	20	10.1523
MYH2	0	genome.wustl.edu	37	17	10426500	10426500	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	10426500	10426500	C	T	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.5580	p.T1860	0.988	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414				75	0	0	76	8	9.52381
DNAH9	0	genome.wustl.edu	37	17	11650936	11650936	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	11650936	11650936	A	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.6463	p.T2155S	0.445	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				82	0	0	76	9	10.5882
KCNH4	0	genome.wustl.edu	37	17	40312390	40312390	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	40312390	40312390	G	C	SNP	KCNH4	ENST00000264661	human	ensembl	74_37	-1	known	missense	c.2722	p.L908V	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_fold,pfam_PAS_4,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH4	HGNC	ENSG00000089558				94	0	0	77	11	12.5
MED13	0	genome.wustl.edu	37	17	60028345	60028345	+	Silent	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	60028345	60028345	A	G	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	silent	c.6132	p.D2044	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510				87	0	0	78	5	6.0241
MARCH10	0	genome.wustl.edu	37	17	60813407	60813407	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	60813407	60813407	G	T	SNP	MARCH10	ENST00000311269	human	ensembl	74_37	-1	known	missense	c.1822	p.H608N	0.887	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH10	HGNC	ENSG00000173838				173	0	0	192	14	6.79612
PSMC5	0	genome.wustl.edu	37	17	61908692	61908692	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	61908692	61908692	C	T	SNP	PSMC5	ENST00000310144	human	ensembl	74_37	+1	known	silent	c.876	p.I292	1.000	pfam_ATPase_AAA_core,pfam_ATPase_AAA-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_AAA-2,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC5	HGNC	ENSG00000087191				475	0	0	465	28	5.67951
SCN4A	0	genome.wustl.edu	37	17	62045633	62045633	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	62045633	62045633	G	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.786	p.S262R	0.632	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314				188	0	0	161	15	8.52273
AXIN2	0	genome.wustl.edu	37	17	63553925	63553925	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	63553925	63553925	T	A	SNP	AXIN2	ENST00000307078	human	ensembl	74_37	-1	known	missense	c.814	p.R272W	1.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN2	HGNC	ENSG00000168646				108	0	0	73	4	5.19481
PRKCA	0	genome.wustl.edu	37	17	64492399	64492399	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	64492399	64492399	G	A	SNP	PRKCA	ENST00000413366	human	ensembl	74_37	+1	known	missense	c.286	p.D96N	1.000	pirsf_Protein_kinase_C_a/b/g	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCA	HGNC	ENSG00000154229				80	0	0	45	5	10
ABCA6	0	genome.wustl.edu	37	17	67101605	67101605	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	67101605	67101605	G	A	SNP	ABCA6	ENST00000284425	human	ensembl	74_37	-1	known	missense	c.2738	p.T913I	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA6	HGNC	ENSG00000154262				49	0	0	54	5	8.47458
HGS	0	genome.wustl.edu	37	17	79663723	79663723	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	17	79663723	79663723	G	A	SNP	HGS	ENST00000329138	human	ensembl	74_37	+1	known	silent	c.1653	p.K551	1.000	pirsf_Ubi-bd_Hrs_VPS27	pfam_VHS,pfam_HRS_helical,pfam_Znf_FYVE,superfamily_ENTH_VHS,superfamily_Znf_FYVE_PHD,smart_VHS_subgr,smart_Znf_FYVE,pirsf_Ubi-bd_Hrs_VPS27,pfscan_Ubiquitin-int_motif,pfscan_VHS,pfscan_Znf_FYVE-rel	-	no_errors	HGS	HGNC	ENSG00000185359				121	0	0	93	21	18.4211
PSMG2	0	genome.wustl.edu	37	18	12720616	12720616	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	18	12720616	12720616	T	C	SNP	PSMG2	ENST00000317615	human	ensembl	74_37	+1	known	missense	c.515	p.I172T	0.740	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	-	no_errors	PSMG2	HGNC	ENSG00000128789				54	0	0	46	11	19.2982
EPB41L3	0	genome.wustl.edu	37	18	5416252	5416252	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	18	5416252	5416252	C	T	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	silent	c.1632	p.P544	0.000	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397				154	0	0	110	6	5.17241
SALL3	0	genome.wustl.edu	37	18	76756940	76756940	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	18	76756940	76756940	G	A	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.3521	p.R1174H	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463				52	0	0	60	4	6.25
PHLDB3	0	genome.wustl.edu	37	19	44008156	44008156	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	44008156	44008156	C	G	SNP	PHLDB3	ENST00000292140	human	ensembl	74_37	-1	known	missense	c.115	p.E39Q	0.078	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB3	HGNC	ENSG00000176531				73	0	0	92	5	5.15464
ZNF841	0	genome.wustl.edu	37	19	52569052	52569052	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	52569052	52569052	T	C	SNP	ZNF841	ENST00000389534	human	ensembl	74_37	-1	known	missense	c.2083	p.K695E	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF841	HGNC	ENSG00000197608				39	0	0	39	4	9.30233
ZNF600	0	genome.wustl.edu	37	19	53270996	53270996	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	53270996	53270996	C	A	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	missense	c.13	p.V5F	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190				289	0	0	305	25	7.57576
ZNF471	0	genome.wustl.edu	37	19	57036484	57036484	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	57036484	57036484	G	A	SNP	ZNF471	ENST00000308031	human	ensembl	74_37	+1	known	missense	c.1048	p.E350K	0.039	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF471	HGNC	ENSG00000196263				125	0	0	143	13	8.33333
C3	0	genome.wustl.edu	37	19	6697435	6697435	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	6697435	6697435	C	T	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	missense	c.2716	p.G906S	0.992	NULL	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730				108	0	0	77	5	6.09756
PRSS57	0	genome.wustl.edu	37	19	686959	686959	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	19	686959	686959	C	G	SNP	PRSS57	ENST00000329267	human	ensembl	74_37	-1	known	missense	c.611	p.R204P	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS57	HGNC	ENSG00000185198				108	0	0	73	6	7.59494
ST6GAL2	0	genome.wustl.edu	37	2	107460329	107460329	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	2	107460329	107460329	G	A	SNP	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	silent	c.105	p.P35	0.000	NULL	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057				94	0	0	89	9	9.18367
SF3B1	0	genome.wustl.edu	37	2	198257052	198257052	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	2	198257052	198257052	C	T	SNP	SF3B1	ENST00000335508	human	ensembl	74_37	-1	known	missense	c.3890	p.R1297H	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524				74	0	0	70	5	6.66667
FN1	0	genome.wustl.edu	37	2	216251516	216251516	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	2	216251516	216251516	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.4508	p.S1503F	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				92	0	0	72	7	8.86076
ASPRV1	0	genome.wustl.edu	37	2	70188256	70188256	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	2	70188256	70188256	C	A	SNP	ASPRV1	ENST00000320256	human	ensembl	74_37	-1	known	missense	c.565	p.A189S	1.000	superfamily_Peptidase_aspartic_dom	pfam_Peptidase_aspartic_DDI1-type,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic_dom,pfscan_Peptidase_A2_cat	-	no_errors	ASPRV1	HGNC	ENSG00000244617				150	0	0	106	6	5.35714
GGTLC1	0	genome.wustl.edu	37	20	23966510	23966510	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	20	23966510	23966510	C	A	SNP	GGTLC1	ENST00000278765	human	ensembl	74_37	-1	known	missense	c.406	p.A136S	1.000	pfam_GGT_peptidase,prints_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGTLC1	HGNC	ENSG00000149435				299	0	0	214	15	6.55022
ZSWIM1	0	genome.wustl.edu	37	20	44511885	44511885	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	20	44511885	44511885	C	A	SNP	ZSWIM1	ENST00000372520	human	ensembl	74_37	+1	known	missense	c.654	p.S218R	0.980	NULL	pfam_Znf_SWIM,pfscan_Znf_SWIM	-	no_errors	ZSWIM1	HGNC	ENSG00000168612				101	0	0	74	4	5.12821
TMPRSS15	0	genome.wustl.edu	37	21	19704477	19704477	+	Silent	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	21	19704477	19704477	T	C	SNP	TMPRSS15	ENST00000284885	human	ensembl	74_37	-1	known	silent	c.1578	p.G526	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_MAM_dom,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_Peptidase_S1A_nudel,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_ConA-like_lec_gl_sf,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_MAM_dom,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,pfscan_SEA_dom,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS15	HGNC	ENSG00000154646				117	0	0	99	10	9.17431
ELFN2	0	genome.wustl.edu	37	22	37770349	37770349	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	22	37770349	37770349	A	G	SNP	ELFN2	ENST00000402918	human	ensembl	74_37	-1	known	missense	c.1226	p.V409A	1.000	pfscan_LPXTG_anchor	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897				201	0	0	131	15	10.274
MME	0	genome.wustl.edu	37	3	154802082	154802082	+	Silent	SNP	T	T	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	3	154802082	154802082	T	A	SNP	MME	ENST00000360490	human	ensembl	74_37	+1	known	silent	c.126	p.A42	0.911	NULL	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MME	HGNC	ENSG00000196549				188	0	0	170	11	6.07735
TGFBR2	0	genome.wustl.edu	37	3	30715613	30715613	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	3	30715613	30715613	A	G	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.1346	p.Y449C	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513				76	0	0	71	6	7.79221
SLC6A20	0	genome.wustl.edu	37	3	45812743	45812743	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	3	45812743	45812743	T	G	SNP	SLC6A20	ENST00000358525	human	ensembl	74_37	-1	known	missense	c.901	p.K301Q	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport_orphan	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A20	HGNC	ENSG00000163817				81	0	0	64	12	15.7895
FYCO1	0	genome.wustl.edu	37	3	46008078	46008078	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	3	46008078	46008078	G	A	SNP	FYCO1	ENST00000535325	human	ensembl	74_37	-1	known	silent	c.2748	p.T916	0.002	NULL	pfam_Znf_FYVE,pfam_Run,superfamily_GOLD,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Znf_FYVE,pfscan_GOLD,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	FYCO1	HGNC	ENSG00000163820				124	0	0	86	10	10.4167
KLB	0	genome.wustl.edu	37	4	39439368	39439368	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	4	39439368	39439368	G	A	SNP	KLB	ENST00000257408	human	ensembl	74_37	+1	known	missense	c.1358	p.R453Q	0.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	KLB	HGNC	ENSG00000134962				282	1	0.353357	239	14	5.5336
KCNN2	0	genome.wustl.edu	37	5	113740271	113740271	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	113740271	113740271	G	A	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	missense	c.719	p.R240Q	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709				251	0	0	241	31	11.3971
PCDHB18	0	genome.wustl.edu	37	5	140616343	140616343	+	RNA	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	140616343	140616343	G	T	SNP	PCDHB18	ENST00000526308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001				288	0	0	299	18	5.67823
ZFP2	0	genome.wustl.edu	37	5	178358966	178358966	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	178358966	178358966	G	C	SNP	ZFP2	ENST00000361362	human	ensembl	74_37	+1	known	missense	c.652	p.E218Q	0.998	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP2	HGNC	ENSG00000198939				102	0	0	85	6	6.59341
CDH9	0	genome.wustl.edu	37	5	26906901	26906901	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	26906901	26906901	G	T	SNP	CDH9	ENST00000231021	human	ensembl	74_37	-1	known	missense	c.570	p.N190K	0.980	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100				76	0	0	86	9	9.47368
JMY	0	genome.wustl.edu	37	5	78587100	78587100	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	78587100	78587100	G	A	SNP	JMY	ENST00000396137	human	ensembl	74_37	+1	known	missense	c.1505	p.R502Q	0.999	NULL	pfscan_WH2_dom	-	no_errors	JMY	HGNC	ENSG00000152409				103	1	0.961538	105	10	8.69565
ELL2	0	genome.wustl.edu	37	5	95255186	95255186	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	5	95255186	95255186	T	C	SNP	ELL2	ENST00000237853	human	ensembl	74_37	-1	known	missense	c.259	p.N87D	1.000	pfam_RNA_pol_II_elong_fac_ELL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL2	HGNC	ENSG00000118985				164	0	0	134	11	7.58621
OSTCP1	0	genome.wustl.edu	37	6	159262724	159262724	+	RNA	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	6	159262724	159262724	C	A	SNP	OSTCP1	ENST00000522287	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	OSTCP1	HGNC	ENSG00000243775				181	1	0.549451	148	10	6.32911
LRFN2	0	genome.wustl.edu	37	6	40400557	40400557	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	6	40400557	40400557	A	G	SNP	LRFN2	ENST00000338305	human	ensembl	74_37	-1	known	missense	c.296	p.L99P	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN2	HGNC	ENSG00000156564				59	0	0	77	7	8.33333
GPR116	0	genome.wustl.edu	37	6	46826342	46826342	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	6	46826342	46826342	C	T	SNP	GPR116	ENST00000265417	human	ensembl	74_37	-1	known	missense	c.3298	p.V1100I	0.942	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_SEA_dom,pfam_GPS_dom,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom,prints_GPCR_2_Ig-hepta_rcpt,prints_GPCR_2_secretin-like	-	no_errors	GPR116	HGNC	ENSG00000069122				84	0	0	71	7	8.97436
F13A1	0	genome.wustl.edu	37	6	6174842	6174842	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	6	6174842	6174842	G	A	SNP	F13A1	ENST00000264870	human	ensembl	74_37	-1	known	missense	c.1718	p.T573M	0.422	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	F13A1	HGNC	ENSG00000124491				210	0	0	170	10	5.55556
MUC17	0	genome.wustl.edu	37	7	100685182	100685182	+	Silent	SNP	C	C	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	100685182	100685182	C	G	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.10485	p.T3495	0.012	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				559	0	0	483	54	10.0559
DNAJB6	0	genome.wustl.edu	37	7	157177590	157177590	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	157177590	157177590	G	A	SNP	DNAJB6	ENST00000262177	human	ensembl	74_37	+1	known	missense	c.508	p.G170R	0.998	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB6	HGNC	ENSG00000105993				185	0	0	164	12	6.81818
DNAH11	0	genome.wustl.edu	37	7	21646341	21646341	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	21646341	21646341	C	T	SNP	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	missense	c.3842	p.A1281V	0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877				27	0	0	38	3	7.31707
AOAH	0	genome.wustl.edu	37	7	36726313	36726313	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	36726313	36726313	A	G	SNP	AOAH	ENST00000258749	human	ensembl	74_37	-1	known	missense	c.214	p.Y72H	1.000	superfamily_Saposin-like,smart_SaposinB,pfscan_SaposinB	pfam_Lipase_GDSL,pfam_SapB_2,superfamily_Saposin-like,smart_SaposinB,pfscan_SaposinB	-	no_errors	AOAH	HGNC	ENSG00000136250				59	0	0	71	4	5.33333
VSTM2A	0	genome.wustl.edu	37	7	54612476	54612476	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	54612476	54612476	G	A	SNP	VSTM2A	ENST00000402026	human	ensembl	74_37	+1	known	missense	c.238	p.A80T	0.002	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2A	HGNC	ENSG00000170419				26	0	0	31	4	11.4286
AUTS2	0	genome.wustl.edu	37	7	70231160	70231160	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	7	70231160	70231160	G	A	SNP	AUTS2	ENST00000342771	human	ensembl	74_37	+1	known	missense	c.1529	p.R510H	1.000	NULL	prints_AUTS2	-	no_errors	AUTS2	HGNC	ENSG00000158321				149	0	0	135	10	6.89655
PKHD1L1	0	genome.wustl.edu	37	8	110464395	110464395	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	110464395	110464395	A	C	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.6393	p.K2131N	0.202	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				61	0	0	73	4	5.19481
KCNQ3	0	genome.wustl.edu	37	8	133196524	133196524	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	133196524	133196524	G	A	SNP	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	nonsense	c.568	p.R190*	0.984	pfam_Ion_trans_dom,prints_K_chnl_volt-dep_KCNQ	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156				198	0	0	157	19	10.7955
SLC45A4	0	genome.wustl.edu	37	8	142222339	142222339	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	142222339	142222339	G	A	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.2258	p.T753M	0.001	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				59	0	0	40	5	11.1111
ZFHX4	0	genome.wustl.edu	37	8	77616425	77616425	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	77616425	77616425	A	C	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.102	p.K34N	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				69	0	0	58	13	18.3099
ZFHX4	0	genome.wustl.edu	37	8	77765710	77765710	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	8	77765710	77765710	C	T	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	nonsense	c.6553	p.R2185*	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				144	0	0	104	13	11.1111
ZNF462	0	genome.wustl.edu	37	9	109690472	109690472	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	9	109690472	109690472	G	A	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	missense	c.4279	p.V1427M	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143				76	0	0	69	4	5.47945
C9orf172	0	genome.wustl.edu	37	9	139741274	139741274	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	9	139741274	139741274	G	C	SNP	C9orf172	ENST00000436881	human	ensembl	74_37	+1	known	missense	c.2408	p.G803A	1.000	NULL	NULL	-	no_errors	C9orf172	HGNC	ENSG00000232434				27	0	0	13	3	18.75
IFT74	0	genome.wustl.edu	37	9	26961993	26961993	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	9	26961993	26961993	G	A	SNP	IFT74	ENST00000380062	human	ensembl	74_37	+1	known	missense	c.28	p.A10T	0.007	NULL	NULL	-	no_errors	IFT74	HGNC	ENSG00000096872				131	0	0	113	10	8.13008
TLN1	0	genome.wustl.edu	37	9	35725613	35725613	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	9	35725613	35725613	C	T	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	missense	c.79	p.D27N	1.000	NULL	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076				252	2	0.787402	217	24	9.95851
MT-RNR2	0	genome.wustl.edu	37	MT	1913	1913	+	RNA	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	MT	1913	1913	G	A	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082				145	0	0	203	12	5.5814
MT-CO2	0	genome.wustl.edu	37	MT	8251	8251	+	Silent	SNP	G	G	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	MT	8251	8251	G	A	SNP	MT-CO2	ENST00000361739	human	ensembl	74_37	+1	known	silent	c.666	p.G222	NULL	pfscan_Cyt_c_oxidase_su2_C	pfam_Cyt_c_oxidase_su2_C,pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cupredoxin,superfamily_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	-	no_errors	MT-CO2	HGNC	ENSG00000198712				95	0	0	90	39	30.2326
SOWAHD	0	genome.wustl.edu	37	X	118893487	118893487	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	X	118893487	118893487	C	A	SNP	SOWAHD	ENST00000343905	human	ensembl	74_37	+1	known	nonsense	c.857	p.S286*	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SOWAHD	HGNC	ENSG00000187808				55	0	0	40	5	11.1111
DCAF12L1	0	genome.wustl.edu	37	X	125685392	125685392	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	X	125685392	125685392	C	T	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	silent	c.1200	p.R400	0.001	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				197	1	0.505051	148	11	6.91824
MAGEB6	0	genome.wustl.edu	37	X	26212038	26212038	+	Silent	SNP	C	C	T			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	X	26212038	26212038	C	T	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	silent	c.75	p.L25	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746				110	0	0	90	9	9.09091
NLGN4X	0	genome.wustl.edu	37	X	5811186	5811186	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	X	5811186	5811186	T	C	SNP	NLGN4X	ENST00000381093	human	ensembl	74_37	-1	known	missense	c.2183	p.H728R	0.630	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC	ENSG00000146938				142	0	0	106	12	10.1695
MUC6	0	genome.wustl.edu	37	11	1018736	1018742	+	Frame_Shift_Del	DEL	CGTTGTT	CGTTGTT	-			TCGA-RD-A7BW-01A-11D-A32N-08	TCGA-RD-A7BW-10A-01D-A32N-08	CGTTGTT	CGTTGTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	03130cd0-49f2-4c9d-b55a-7b1985b7705e	ab64b35a-140a-4e55-bad3-5d8ca48c1f33	11	1018736	1018742	CGTTGTT	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	frame_shift_del	c.4065_4059	p.T1354fs	0.001:0.005:0.004:0.005:0.006:0.006:0.001	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				150	0	0	130	9	6.47482
