Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AASS	0	genome.wustl.edu	37	7	121773649	121773649	+	Silent	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	121773649	121773649	G	C	SNP	AASS	ENST00000393376	human	ensembl	74_37	-1	known	silent	c.132	p.P44	0.043	pfam_AlaDH/PNT_N	pfam_Saccharopine_DH/HSpermid_syn,pfam_AlaDH/PNT_NAD(H)-bd,pfam_AlaDH/PNT_N	-	no_errors	AASS	HGNC	ENSG00000008311	tier1	-	-	116	0	0.00	118	10	7.75
ABCF3	0	genome.wustl.edu	37	3	183906155	183906155	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	183906155	183906155	C	T	SNP	ABCF3	ENST00000429586	human	ensembl	74_37	+1	known	missense	c.796	p.R266W	0.386	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF3	HGNC	ENSG00000161204	tier1	-	-	236	0	0.00	170	52	23.42
ACR	0	genome.wustl.edu	37	22	51178361	51178361	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	22	51178361	51178361	C	T	SNP	ACR	ENST00000216139	human	ensembl	74_37	+1	known	missense	c.521	p.S174F	0.059	pirsf_Pept_S1A_acrosin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_acrosin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	ACR	HGNC	ENSG00000100312	tier1	-	-	155	0	0.00	110	23	17.29
ADAM23	0	genome.wustl.edu	37	2	207424843	207424843	+	Splice_Site	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	207424843	207424843	G	A	SNP	ADAM23	ENST00000264377	human	ensembl	74_37	+1	known	splice_site	c.1169+1	e11+1	1.000	-	-	-	no_errors	ADAM23	HGNC	ENSG00000114948	tier1	-	-	55	0	0.00	50	15	22.73
ADAM23	0	genome.wustl.edu	37	2	207460850	207460850	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	207460850	207460850	A	G	SNP	ADAM23	ENST00000264377	human	ensembl	74_37	+1	known	missense	c.2323	p.R775G	0.989	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM23	HGNC	ENSG00000114948	tier1	-	-	63	0	0.00	57	7	10.94
ADAMTS19	0	genome.wustl.edu	37	5	128984637	128984637	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	128984637	128984637	T	G	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	missense	c.2132	p.L711R	0.992	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808	tier1	-	-	189	0	0.00	168	16	8.70
ADARB2	0	genome.wustl.edu	37	10	1284314	1284314	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	1284314	1284314	T	A	SNP	ADARB2	ENST00000381312	human	ensembl	74_37	-1	known	missense	c.1241	p.K414M	1.000	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADARB2	HGNC	ENSG00000185736	tier1	-	-	20	0	0.00	7	10	58.82
ADCK1	0	genome.wustl.edu	37	14	78397959	78397959	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	78397959	78397959	C	T	SNP	ADCK1	ENST00000238561	human	ensembl	74_37	+1	known	silent	c.1305	p.N435	0.440	NULL	pfam_UbiB_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK1	HGNC	ENSG00000063761	tier1	-	-	124	0	0.00	104	9	7.96
ADSS	0	genome.wustl.edu	37	1	244615083	244615083	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	244615083	244615083	G	A	SNP	ADSS	ENST00000366535	human	ensembl	74_37	-1	known	silent	c.37	p.L13	0.017	NULL	pfam_Adenylosuccinate_synthetase,superfamily_P-loop_NTPase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	-	no_errors	ADSS	HGNC	ENSG00000035687	tier1	-	-	22	0	0.00	20	5	20.00
AGAP2	0	genome.wustl.edu	37	12	58124619	58124619	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	58124619	58124619	C	T	SNP	AGAP2	ENST00000547588	human	ensembl	74_37	-1	known	missense	c.2263	p.G755R	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP2	HGNC	ENSG00000135439	tier1	-	-	54	0	0.00	43	9	17.31
AGO2	0	genome.wustl.edu	37	8	141551455	141551455	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	141551455	141551455	C	T	SNP	AGO2	ENST00000220592	human	ensembl	74_37	-1	known	silent	c.1842	p.V614	0.994	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO2	HGNC	ENSG00000123908	tier1	-	-	40	0	0.00	29	10	25.64
AIG1	0	genome.wustl.edu	37	6	143605350	143605350	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	143605350	143605350	G	C	SNP	AIG1	ENST00000275235	human	ensembl	74_37	+1	known	missense	c.503	p.G168A	1.000	pfam_Far-17a_AIG1	pfam_Far-17a_AIG1	-	no_errors	AIG1	HGNC	ENSG00000146416	tier1	-	-	57	0	0.00	45	8	15.09
AKAP11	0	genome.wustl.edu	37	13	42875435	42875435	+	Silent	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	42875435	42875435	A	G	SNP	AKAP11	ENST00000025301	human	ensembl	74_37	+1	known	silent	c.2553	p.K851	0.231	NULL	NULL	-	no_errors	AKAP11	HGNC	ENSG00000023516	tier1	-	-	70	0	0.00	79	6	7.06
AMPD1	0	genome.wustl.edu	37	1	115220099	115220099	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	115220099	115220099	G	A	SNP	AMPD1	ENST00000520113	human	ensembl	74_37	-1	known	missense	c.1360	p.H454Y	1.000	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD1	HGNC	ENSG00000116748	tier1	-	-	114	0	0.00	83	8	8.79
ANGPT1	0	genome.wustl.edu	37	8	108334209	108334209	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	108334209	108334209	G	A	SNP	ANGPT1	ENST00000517746	human	ensembl	74_37	-1	known	silent	c.723	p.T241	0.619	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT1	HGNC	ENSG00000154188	tier1	-	-	138	0	0.00	126	24	15.89
ANKMY1	0	genome.wustl.edu	37	2	241494402	241494402	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	241494402	241494402	C	A	SNP	ANKMY1	ENST00000361678	human	ensembl	74_37	-1	known	nonsense	c.217	p.E73*	0.038	NULL	pfam_MORN,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_MORN,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY1	HGNC	ENSG00000144504	tier1	-	-	304	0	0.00	195	73	26.94
ANKRD20A11P	0	genome.wustl.edu	37	21	15311698	15311698	+	RNA	DEL	G	G	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	21	15311698	15311698	G	-	DEL	ANKRD20A11P	ENST00000428576	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.203	-	-	-	no_errors	ANKRD20A11P	HGNC	ENSG00000215559	tier1			40	0	0.00	22	12	35.29
ANKRD30A	0	genome.wustl.edu	37	10	37430822	37430822	+	Nonsense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	37430822	37430822	G	T	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	nonsense	c.829	p.E277*	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513	tier1	-	-	66	0	0.00	69	14	16.87
ANKRD30A	0	genome.wustl.edu	37	10	37430823	37430823	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	37430823	37430823	A	G	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.830	p.E277G	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513	tier1	-	-	67	0	0.00	69	14	16.67
ARF1	0	genome.wustl.edu	37	1	228285822	228285822	+	RNA	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	228285822	228285822	C	T	SNP	ARF1	ENST00000470558	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ARF1	HGNC	ENSG00000143761	tier1	-	-	29	0	0.00	9	14	60.87
ARHGAP5	0	genome.wustl.edu	37	14	32559900	32559900	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	32559900	32559900	C	T	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.25	p.R9C	1.000	superfamily_P-loop_NTPase	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	-	-	145	0	0.00	104	27	20.61
ASAP2	0	genome.wustl.edu	37	2	9515045	9515045	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	9515045	9515045	C	T	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	missense	c.1718	p.T573M	0.993	superfamily_Ankyrin_rpt-contain_dom	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP2	HGNC	ENSG00000151693	tier1	-	-	140	0	0.00	105	17	13.93
ATG10	0	genome.wustl.edu	37	5	81474399	81474399	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	81474399	81474399	C	T	SNP	ATG10	ENST00000282185	human	ensembl	74_37	+1	known	missense	c.446	p.T149M	0.988	pfam_Autophagy-rel_prot_3	pfam_Autophagy-rel_prot_3	-	no_errors	ATG10	HGNC	ENSG00000152348	tier1	-	-	95	0	0.00	93	11	10.58
ATP10B	0	genome.wustl.edu	37	5	160029609	160029609	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	160029609	160029609	A	T	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.3338	p.V1113E	1.000	tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322	tier1	-	-	82	0	0.00	32	18	36.00
ATP4B	0	genome.wustl.edu	37	13	114309158	114309158	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	114309158	114309158	G	A	SNP	ATP4B	ENST00000335288	human	ensembl	74_37	-1	known	missense	c.212	p.P71L	0.971	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP4B	HGNC	ENSG00000186009	tier1	-	-	61	0	0.00	28	19	40.43
ATP6V0D2	0	genome.wustl.edu	37	8	87111221	87111221	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	87111221	87111221	C	T	SNP	ATP6V0D2	ENST00000285393	human	ensembl	74_37	+1	known	missense	c.14	p.A5V	0.136	pirsf_ATPase_V0-cplx_dsu	pfam_ATPase_V0-cplx_csu/dsu,superfamily_ATPase_V0-cplx_csu/dsu,pirsf_ATPase_V0-cplx_dsu	-	no_errors	ATP6V0D2	HGNC	ENSG00000147614	tier1	-	-	139	0	0.00	131	13	9.03
AZI2	0	genome.wustl.edu	37	3	28368376	28368376	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	28368376	28368376	T	A	SNP	AZI2	ENST00000479665	human	ensembl	74_37	-1	known	missense	c.713	p.Q238L	1.000	NULL	NULL	-	no_errors	AZI2	HGNC	ENSG00000163512	tier1	-	-	131	0	0.00	90	11	10.89
BAI3	0	genome.wustl.edu	37	6	69348631	69348631	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	69348631	69348631	T	G	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.64	p.F22V	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	133	0	0.00	109	11	9.17
BAI3	0	genome.wustl.edu	37	6	70037721	70037721	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	70037721	70037721	C	G	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.2975	p.A992G	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	89	0	0.00	55	9	14.06
BAZ2B	0	genome.wustl.edu	37	2	160289338	160289338	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	160289338	160289338	A	C	SNP	BAZ2B	ENST00000392783	human	ensembl	74_37	-1	known	missense	c.1830	p.D610E	1.000	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2B	HGNC	ENSG00000123636	tier1	-	-	94	0	0.00	60	10	14.29
BNC1	0	genome.wustl.edu	37	15	83935597	83935597	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	83935597	83935597	G	A	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	silent	c.426	p.Y142	0.046	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594	tier1	-	-	183	0	0.00	143	26	15.38
C11orf30	0	genome.wustl.edu	37	11	76183702	76183702	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	76183702	76183702	C	T	SNP	C11orf30	ENST00000334736	human	ensembl	74_37	+1	known	missense	c.926	p.T309M	1.000	NULL	pfam_ENT_N,pfscan_ENT_N	-	no_errors	C11orf30	HGNC	ENSG00000158636	tier1	-	-	120	0	0.00	177	16	8.29
C20orf26	0	genome.wustl.edu	37	20	20278996	20278996	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	20278996	20278996	C	T	SNP	C20orf26	ENST00000245957	human	ensembl	74_37	+1	known	missense	c.3388	p.R1130W	0.998	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101	tier1	-	-	62	0	0.00	32	37	53.62
C9orf43	0	genome.wustl.edu	37	9	116183431	116183431	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	116183431	116183431	G	A	SNP	C9orf43	ENST00000288462	human	ensembl	74_37	+1	known	missense	c.394	p.V132I	0.003	NULL	NULL	-	no_errors	C9orf43	HGNC	ENSG00000157653	tier1	-	-	151	0	0.00	103	20	16.26
CABS1	0	genome.wustl.edu	37	4	71200811	71200811	+	Nonsense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	71200811	71200811	A	T	SNP	CABS1	ENST00000273936	human	ensembl	74_37	+1	known	nonsense	c.55	p.K19*	0.002	NULL	NULL	-	no_errors	CABS1	HGNC	ENSG00000145309	tier1	-	-	99	0	0.00	65	13	16.67
CACNA1B	0	genome.wustl.edu	37	9	141016021	141016021	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	141016021	141016021	C	T	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.6593	p.P2198L	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	tier1	-	-	53	0	0.00	38	7	15.56
CACNA1H	0	genome.wustl.edu	37	16	1261575	1261575	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	1261575	1261575	G	A	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	missense	c.4445	p.R1482Q	0.995	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557	tier1	-	-	40	0	0.00	24	9	27.27
CADM3	0	genome.wustl.edu	37	1	159163218	159163218	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	159163218	159163218	C	T	SNP	CADM3	ENST00000368124	human	ensembl	74_37	+1	known	missense	c.490	p.P164S	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like_dom	-	no_errors	CADM3	HGNC	ENSG00000162706	tier1	-	-	106	0	0.00	101	8	7.27
CATSPER2	0	genome.wustl.edu	37	15	43932664	43932664	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	43932664	43932664	C	T	SNP	CATSPER2	ENST00000321596	human	ensembl	74_37	-1	known	nonsense	c.419	p.W140*	0.255	NULL	pfam_Ion_trans_dom	-	no_errors	CATSPER2	HGNC	ENSG00000166762	tier1	-	-	173	0	0.00	121	13	9.70
CBL	0	genome.wustl.edu	37	11	119077233	119077235	+	In_Frame_Del	DEL	CAC	CAC	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	CAC	CAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	119077233	119077235	CAC	-	DEL	CBL	ENST00000264033	human	ensembl	74_37	+1	known	in_frame_del	c.106_108	p.H39in_frame_del	0.999:1.000:1.000	NULL	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBL	HGNC	ENSG00000110395	tier1			10	0	0.00	4	2	33.33
CCDC144A	0	genome.wustl.edu	37	17	16593937	16593937	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	16593937	16593937	G	A	SNP	CCDC144A	ENST00000360524	human	ensembl	74_37	+1	known	missense	c.223	p.D75N	0.002	NULL	pfam_DUF3496	-	no_errors	CCDC144A	HGNC	ENSG00000170160	tier1	-	-	248	0	0.00	136	109	44.49
CCDC42	0	genome.wustl.edu	37	17	8644967	8644967	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	8644967	8644967	C	T	SNP	CCDC42	ENST00000293845	human	ensembl	74_37	-1	known	missense	c.317	p.R106H	0.980	NULL	NULL	-	no_errors	CCDC42	HGNC	ENSG00000161973	tier1	-	-	68	0	0.00	42	19	31.15
CCDC82	0	genome.wustl.edu	37	11	96086843	96086843	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	96086843	96086843	C	T	SNP	CCDC82	ENST00000278520	human	ensembl	74_37	-1	known	silent	c.1602	p.A534	0.967	NULL	NULL	-	no_errors	CCDC82	HGNC	ENSG00000149231	tier1	-	-	177	0	0.00	138	27	16.36
CD36	0	genome.wustl.edu	37	7	80292468	80292468	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	80292468	80292468	G	C	SNP	CD36	ENST00000309881	human	ensembl	74_37	+1	known	missense	c.592	p.V198L	0.531	pfam_CD36,prints_CD36_antigen	pfam_CD36,prints_CD36_antigen,prints_CD36	-	no_errors	CD36	HGNC	ENSG00000135218	tier1	-	-	153	0	0.00	118	15	11.28
CDC42BPB	0	genome.wustl.edu	37	14	103430926	103430926	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	103430926	103430926	T	G	SNP	CDC42BPB	ENST00000361246	human	ensembl	74_37	-1	known	missense	c.2639	p.Q880P	1.000	pfam_Myotonic_dystrophy_kinase_coil	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	CDC42BPB	HGNC	ENSG00000198752	tier1	-	-	67	0	0.00	42	13	23.64
CDH8	0	genome.wustl.edu	37	16	61935343	61935343	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	61935343	61935343	A	G	SNP	CDH8	ENST00000577390	human	ensembl	74_37	-1	known	missense	c.287	p.I96T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH8	HGNC	ENSG00000150394	tier1	-	-	93	0	0.00	82	12	12.77
CEP152	0	genome.wustl.edu	37	15	49090149	49090149	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	49090149	49090149	C	T	SNP	CEP152	ENST00000380950	human	ensembl	74_37	-1	known	missense	c.187	p.G63R	0.000	NULL	NULL	-	no_errors	CEP152	HGNC	ENSG00000103995	tier1	-	-	40	0	0.00	32	5	13.51
CFH	0	genome.wustl.edu	37	1	196643035	196643035	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	196643035	196643035	T	A	SNP	CFH	ENST00000367429	human	ensembl	74_37	+1	known	missense	c.293	p.L98H	0.241	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971	tier1	-	-	150	0	0.00	106	59	35.54
CHL1	0	genome.wustl.edu	37	3	443365	443365	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	443365	443365	A	C	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.3442	p.T1148P	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121	tier1	-	-	89	0	0.00	58	8	12.12
CHRNB2	0	genome.wustl.edu	37	1	154544270	154544270	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	154544270	154544270	G	T	SNP	CHRNB2	ENST00000368476	human	ensembl	74_37	+1	known	missense	c.971	p.R324L	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB2	HGNC	ENSG00000160716	tier1	-	-	86	0	0.00	35	24	40.68
CHRNB3	0	genome.wustl.edu	37	8	42591674	42591674	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	42591674	42591674	C	T	SNP	CHRNB3	ENST00000289957	human	ensembl	74_37	+1	known	silent	c.1290	p.F430	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB3	HGNC	ENSG00000147432	tier1	-	-	311	0	0.00	165	76	31.54
CITED1	0	genome.wustl.edu	37	X	71522051	71522051	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	71522051	71522051	G	A	SNP	CITED1	ENST00000431381	human	ensembl	74_37	-1	known	missense	c.182	p.A61V	0.002	pfam_CITED	pfam_CITED	-	no_errors	CITED1	HGNC	ENSG00000125931	tier1	-	-	15	0	0.00	7	13	65.00
CLEC12A	0	genome.wustl.edu	37	12	10133223	10133223	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	10133223	10133223	A	C	SNP	CLEC12A	ENST00000355690	human	ensembl	74_37	+1	known	missense	c.452	p.K151T	0.000	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12A	HGNC	ENSG00000172322	tier1	-	-	155	0	0.00	118	39	24.84
CLIC2	0	genome.wustl.edu	37	X	154508537	154508537	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	154508537	154508537	G	C	SNP	CLIC2	ENST00000369449	human	ensembl	74_37	-1	known	missense	c.483	p.D161E	1.000	superfamily_Glutathione-S-Trfase_C-like,tigrfam_Int_Cl_channel	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC2	HGNC	ENSG00000155962	tier1	-	-	65	0	0.00	30	45	60.00
CNBD1	0	genome.wustl.edu	37	8	88365898	88365898	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	88365898	88365898	T	C	SNP	CNBD1	ENST00000518476	human	ensembl	74_37	+1	known	missense	c.1187	p.L396P	0.229	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNBD1	HGNC	ENSG00000176571	tier1	-	-	72	0	0.00	67	18	21.18
CNTN6	0	genome.wustl.edu	37	3	1425012	1425012	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	1425012	1425012	A	T	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.2437	p.S813C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	342	0	0.00	166	94	36.02
COL12A1	0	genome.wustl.edu	37	6	75892916	75892916	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	75892916	75892916	G	A	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.1741	p.R581C	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	118	0	0.00	94	13	12.15
COL22A1	0	genome.wustl.edu	37	8	139606337	139606337	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	139606337	139606337	C	A	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	missense	c.4538	p.R1513L	0.141	pfam_Collagen	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436	tier1	-	-	103	0	0.00	95	24	20.17
CORO1B	0	genome.wustl.edu	37	11	67209479	67209479	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	67209479	67209479	G	A	SNP	CORO1B	ENST00000341356	human	ensembl	74_37	-1	known	silent	c.282	p.N94	0.513	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO1B	HGNC	ENSG00000172725	tier1	-	-	94	0	0.00	126	21	14.29
CRADD	0	genome.wustl.edu	37	12	94243950	94243950	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	94243950	94243950	G	A	SNP	CRADD	ENST00000332896	human	ensembl	74_37	+1	known	missense	c.503	p.R168Q	1.000	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	pfam_CARD,pfam_Death_domain,superfamily_DEATH-like_dom,smart_CARD,smart_Death_domain,pfscan_CARD,pfscan_Death_domain	-	no_errors	CRADD	HGNC	ENSG00000169372	tier1	-	-	132	0	0.00	86	14	14.00
CRYGA	0	genome.wustl.edu	37	2	209028005	209028005	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	209028005	209028005	G	A	SNP	CRYGA	ENST00000304502	human	ensembl	74_37	-1	known	missense	c.175	p.R59C	0.370	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGA	HGNC	ENSG00000168582	tier1	-	-	99	0	0.00	172	18	9.47
CSAD	0	genome.wustl.edu	37	12	53564266	53564266	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	53564266	53564266	C	T	SNP	CSAD	ENST00000475890	human	ensembl	74_37	-1	known	missense	c.641	p.R214K	0.997	NULL	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	CSAD	HGNC	ENSG00000139631	tier1	-	-	119	0	0.00	85	17	16.67
CSMD1	0	genome.wustl.edu	37	8	3087592	3087592	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	3087592	3087592	A	G	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.4318	p.F1440L	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	92	0	0.00	86	7	7.53
CSMD1	0	genome.wustl.edu	37	8	3087703	3087703	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	3087703	3087703	G	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.4207	p.R1403S	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	41	0	0.00	33	13	28.26
CSMD3	0	genome.wustl.edu	37	8	114326962	114326962	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	114326962	114326962	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.239	p.G80D	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	194	0	0.00	245	23	8.58
CTNNA2	0	genome.wustl.edu	37	2	80085199	80085199	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	80085199	80085199	G	A	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.461	p.R154H	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	tier1	-	-	183	0	0.00	145	14	8.81
CUBN	0	genome.wustl.edu	37	10	16916401	16916401	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	16916401	16916401	C	T	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.9208	p.V3070I	0.166	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	rs144314567	-	192	0	0.00	149	89	37.24
CYFIP2	0	genome.wustl.edu	37	5	156768085	156768085	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	156768085	156768085	C	T	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	missense	c.2668	p.R890W	1.000	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163	tier1	-	-	98	0	0.00	77	12	13.48
CYP11B2	0	genome.wustl.edu	37	8	143999195	143999195	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	143999195	143999195	G	T	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	missense	c.62	p.A21E	0.098	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142	tier1	-	-	234	0	0.00	240	17	6.61
DACH2	0	genome.wustl.edu	37	X	85403712	85403712	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	85403712	85403712	T	C	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.88	p.S30P	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733	tier1	-	-	19	0	0.00	3	25	89.29
DCAF12L1	0	genome.wustl.edu	37	X	125685222	125685222	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	125685222	125685222	T	G	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.1370	p.N457T	0.999	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889	tier1	-	-	109	0	0.00	51	64	55.65
DCC	0	genome.wustl.edu	37	18	50976977	50976977	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	18	50976977	50976977	G	C	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	missense	c.3337	p.V1113L	1.000	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	92	0	0.00	39	14	26.42
DCC	0	genome.wustl.edu	37	18	51013195	51013195	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	18	51013195	51013195	G	A	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	silent	c.3765	p.T1255	0.935	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	150	0	0.00	111	31	21.68
DMD	0	genome.wustl.edu	37	X	32563331	32563331	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	32563331	32563331	G	C	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.2113	p.P705A	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	59	0	0.00	59	9	13.24
DNAH10	0	genome.wustl.edu	37	12	124352667	124352667	+	Splice_Site	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	124352667	124352667	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	splice_site	c.7165+1	e42+1	1.000	-	-	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	41	0	0.00	31	4	11.43
DNHD1	0	genome.wustl.edu	37	11	6578614	6578616	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	6578614	6578616	GAG	-	DEL	DNHD1	ENST00000254579	human	ensembl	74_37	+1	known	in_frame_del	c.8089_8091	p.E2700in_frame_del	0.006:0.004:0.000	NULL	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,superfamily_P-loop_NTPase,superfamily_t-SNARE	-	no_errors	DNHD1	HGNC	ENSG00000179532	tier1			13	0	0.00	4	2	33.33
DNM1P47	0	genome.wustl.edu	37	15	102312241	102312241	+	RNA	DEL	A	A	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	102312241	102312241	A	-	DEL	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1			8	0	0.00	8	4	33.33
DTX3	0	genome.wustl.edu	37	12	58002361	58002361	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	58002361	58002361	C	T	SNP	DTX3	ENST00000551632	human	ensembl	74_37	+1	known	missense	c.818	p.P273L	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DTX3	HGNC	ENSG00000178498	tier1	-	-	117	0	0.00	91	21	18.75
E2F5	0	genome.wustl.edu	37	8	86115407	86115407	+	Silent	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	86115407	86115407	A	G	SNP	E2F5	ENST00000256117	human	ensembl	74_37	+1	known	silent	c.423	p.E141	0.201	NULL	pfam_E2F_TDP	-	no_errors	E2F5	HGNC	ENSG00000133740	tier1	-	-	59	0	0.00	59	8	11.94
EBF3	0	genome.wustl.edu	37	10	131636204	131636204	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	131636204	131636204	G	A	SNP	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	missense	c.1780	p.P594S	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001	tier1	-	-	76	0	0.00	54	13	19.40
ELL	0	genome.wustl.edu	37	19	18561591	18561591	+	Silent	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	18561591	18561591	C	A	SNP	ELL	ENST00000262809	human	ensembl	74_37	-1	known	silent	c.1161	p.R387	0.004	NULL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL	HGNC	ENSG00000105656	tier1	-	-	27	0	0.00	9	4	30.77
ENSG00000180574	0	genome.wustl.edu	37	12	10659342	10659342	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	10659342	10659342	G	A	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	missense	c.841	p.G281S	1.000	pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574	tier1	-	-	309	0	0.00	205	88	29.93
ENSG00000225241	0	genome.wustl.edu	37	1	144594116	144594116	+	RNA	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	144594116	144594116	G	A	SNP	ENSG00000225241	ENST00000419820	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-640M9.2	Clone_based_vega_gene	ENSG00000225241	tier1	rs74679403	-	8	0	0.00	3	3	50.00
ENSG00000268412	0	genome.wustl.edu	37	2	26251082	26251082	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	26251082	26251082	C	T	SNP	ENSG00000268412	ENST00000599234	human	ensembl	74_37	-1	novel	missense	c.400	p.E134K	0.509	NULL	pfam_UPF0434/Trm112	-	no_errors	AC013449.1	Clone_based_ensembl_gene	ENSG00000268412	tier1	-	-	179	0	0.00	91	32	25.81
ENSG00000269996	0	genome.wustl.edu	37	1	121134091	121134091	+	RNA	DEL	G	G	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	121134091	121134091	G	-	DEL	ENSG00000269996	ENST00000602412	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.052	-	-	-	no_errors	RP11-343N15.5	Clone_based_vega_gene	ENSG00000269996	tier1			10	0	0.00	4	2	33.33
EP400NL	0	genome.wustl.edu	37	12	132589453	132589453	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	132589453	132589453	C	T	SNP	EP400NL	ENST00000376625	human	ensembl	74_37	+1	known	silent	c.888	p.G296	0.002	NULL	NULL	-	no_errors	EP400NL	HGNC	ENSG00000185684	tier1	-	-	20	0	0.00	6	4	40.00
EPAS1	0	genome.wustl.edu	37	2	46605202	46605204	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	46605202	46605204	CAG	-	DEL	EPAS1	ENST00000263734	human	ensembl	74_37	+1	known	in_frame_del	c.1419_1421	p.S477in_frame_del	0.987:0.991:0.994	NULL	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	EPAS1	HGNC	ENSG00000116016	tier1			33	0	0.00	24	2	7.69
EPHA6	0	genome.wustl.edu	37	3	96706401	96706401	+	Silent	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	96706401	96706401	A	C	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	silent	c.678	p.S226	0.892	pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224	tier1	-	-	293	0	0.00	170	108	38.57
EPHA7	0	genome.wustl.edu	37	6	94120278	94120278	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	94120278	94120278	A	C	SNP	EPHA7	ENST00000369303	human	ensembl	74_37	-1	known	missense	c.773	p.V258G	1.000	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA7	HGNC	ENSG00000135333	tier1	-	-	127	0	0.00	73	31	29.81
EPS8L2	0	genome.wustl.edu	37	11	726309	726309	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	726309	726309	A	G	SNP	EPS8L2	ENST00000318562	human	ensembl	74_37	+1	known	missense	c.1759	p.M587V	0.998	NULL	pfam_PTB,pfam_SH3_domain,pfam_PTB/PI_dom,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTB/PI_dom,smart_SH3_domain,pfscan_PTB/PI_dom,pfscan_SH3_domain	-	no_errors	EPS8L2	HGNC	ENSG00000177106	tier1	-	-	34	0	0.00	21	8	27.59
ERCC6L	0	genome.wustl.edu	37	X	71427962	71427962	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	71427962	71427962	C	T	SNP	ERCC6L	ENST00000334463	human	ensembl	74_37	-1	known	missense	c.655	p.E219K	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_TPR-contain_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6L	HGNC	ENSG00000186871	tier1	-	-	96	0	0.00	53	74	57.81
F8	0	genome.wustl.edu	37	X	154159298	154159298	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	154159298	154159298	A	C	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	missense	c.2767	p.L923V	0.001	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	tier1	-	-	70	0	0.00	41	57	58.16
FAIM2	0	genome.wustl.edu	37	12	50295007	50295007	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	50295007	50295007	C	T	SNP	FAIM2	ENST00000320634	human	ensembl	74_37	-1	known	silent	c.117	p.E39	1.000	NULL	pfam_Bax_inhibitor_1-related	-	no_errors	FAIM2	HGNC	ENSG00000135472	tier1	-	-	112	0	0.00	100	11	9.91
FAM155B	0	genome.wustl.edu	37	X	68749674	68749674	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	68749674	68749674	C	T	SNP	FAM155B	ENST00000252338	human	ensembl	74_37	+1	known	missense	c.1294	p.R432W	1.000	NULL	NULL	-	no_errors	FAM155B	HGNC	ENSG00000130054	tier1	-	-	71	0	0.00	37	43	53.09
FANCM	0	genome.wustl.edu	37	14	45645883	45645883	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	45645883	45645883	A	T	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.3926	p.H1309L	0.001	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	75	0	0.00	78	29	26.85
FAT3	0	genome.wustl.edu	37	11	92616432	92616432	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	92616432	92616432	G	A	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.12810	p.S4270	0.001	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	247	0	0.00	264	60	18.46
FBXW11	0	genome.wustl.edu	37	5	171305023	171305023	+	Silent	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	171305023	171305023	A	C	SNP	FBXW11	ENST00000265094	human	ensembl	74_37	-1	known	silent	c.900	p.S300	0.005	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW11	HGNC	ENSG00000072803	tier1	-	-	71	0	0.00	71	10	12.35
FDX1	0	genome.wustl.edu	37	11	110306593	110306593	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	110306593	110306593	G	A	SNP	FDX1	ENST00000260270	human	ensembl	74_37	+1	known	missense	c.221	p.R74H	0.998	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pfscan_2Fe-2S_ferredoxin-type	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pfscan_2Fe-2S_ferredoxin-type,prints_Adrenodoxin	-	no_errors	FDX1	HGNC	ENSG00000137714	tier1	-	-	78	0	0.00	60	22	26.83
FERMT2	0	genome.wustl.edu	37	14	53327010	53327011	+	RNA	INS	-	-	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	53327010	53327011	-	G	INS	FERMT2	ENST00000557255	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040:0.009	-	-	-	no_errors	FERMT2	HGNC	ENSG00000073712	tier1			46	0	0.00	29	5	14.71
FERMT2	0	genome.wustl.edu	37	14	53327012	53327012	+	RNA	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	53327012	53327012	C	A	SNP	FERMT2	ENST00000557255	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FERMT2	HGNC	ENSG00000073712	tier1	-	-	48	0	0.00	31	5	13.89
FGFRL1	0	genome.wustl.edu	37	4	1017851	1017851	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	1017851	1017851	C	T	SNP	FGFRL1	ENST00000264748	human	ensembl	74_37	+1	known	missense	c.680	p.A227V	0.209	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FGFRL1	HGNC	ENSG00000127418	tier1	-	-	30	0	0.00	17	8	32.00
FLG	0	genome.wustl.edu	37	1	152286119	152286119	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	152286119	152286119	G	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.1243	p.R415W	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	rs144799241	-	622	0	0.00	449	154	25.50
FNDC3B	0	genome.wustl.edu	37	3	172061938	172061938	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	172061938	172061938	G	A	SNP	FNDC3B	ENST00000336824	human	ensembl	74_37	+1	known	missense	c.2140	p.E714K	0.918	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3B	HGNC	ENSG00000075420	tier1	rs141201285	-	230	0	0.00	204	22	9.73
FOLH1B	0	genome.wustl.edu	37	11	89424117	89424117	+	RNA	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	89424117	89424117	A	C	SNP	FOLH1B	ENST00000525540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.176	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612	tier1	-	-	85	0	0.00	101	16	13.68
FRAS1	0	genome.wustl.edu	37	4	79229294	79229294	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	79229294	79229294	G	A	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	missense	c.1609	p.V537M	0.954	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759	tier1	-	-	43	0	0.00	32	7	17.95
FSD2	0	genome.wustl.edu	37	15	83455853	83455853	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	83455853	83455853	C	A	SNP	FSD2	ENST00000334574	human	ensembl	74_37	-1	known	missense	c.290	p.R97I	0.000	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,prints_Butyrophylin	-	no_errors	FSD2	HGNC	ENSG00000186628	tier1	-	-	172	0	0.00	154	15	8.88
GMEB2	0	genome.wustl.edu	37	20	62223462	62223462	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	62223462	62223462	C	T	SNP	GMEB2	ENST00000266068	human	ensembl	74_37	-1	known	missense	c.865	p.G289S	1.000	superfamily_Sig_transdc_His_kin_Hpt_dom	pfam_SAND_dom,superfamily_SAND_dom-like,superfamily_Sig_transdc_His_kin_Hpt_dom,smart_SAND_dom,pfscan_SAND_dom	-	no_errors	GMEB2	HGNC	ENSG00000101216	tier1	-	-	148	0	0.00	193	11	5.39
GOLGA6L2	0	genome.wustl.edu	37	15	23690543	23690543	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	23690543	23690543	T	C	SNP	GOLGA6L2	ENST00000312015	human	ensembl	74_37	-1	known	missense	c.127	p.R43G	0.039	NULL	prints_Tropomyosin	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	tier1	rs2344900	-	16	0	0.00	7	4	36.36
GP6	0	genome.wustl.edu	37	19	55549586	55549586	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	55549586	55549586	C	T	SNP	GP6	ENST00000310373	human	ensembl	74_37	-1	known	missense	c.19	p.A7T	0.000	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	GP6	HGNC	ENSG00000088053	tier1	-	-	15	0	0.00	17	6	26.09
GPR142	0	genome.wustl.edu	37	17	72368351	72368351	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	72368351	72368351	C	T	SNP	GPR142	ENST00000335666	human	ensembl	74_37	+1	known	missense	c.1001	p.S334L	0.972	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR142	HGNC	ENSG00000257008	tier1	-	-	77	0	0.00	26	20	43.48
GPR179	0	genome.wustl.edu	37	17	36483371	36483371	+	Silent	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	36483371	36483371	G	T	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	silent	c.6081	p.I2027	0.000	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888	tier1	-	-	170	0	0.00	84	62	42.47
GPR50	0	genome.wustl.edu	37	X	150349386	150349386	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	150349386	150349386	T	C	SNP	GPR50	ENST00000218316	human	ensembl	74_37	+1	known	missense	c.1331	p.V444A	0.693	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Mel_rcpt_1X,prints_GPCR_Rhodpsn,prints_Melatonin_rcpt,prints_NPY_rcpt	-	no_errors	GPR50	HGNC	ENSG00000102195	tier1	-	-	385	0	0.00	345	61	15.02
GRIP1	0	genome.wustl.edu	37	12	66849287	66849287	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	66849287	66849287	G	A	SNP	GRIP1	ENST00000359742	human	ensembl	74_37	-1	known	missense	c.1256	p.S419F	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRIP1	HGNC	ENSG00000155974	tier1	-	-	159	0	0.00	120	44	26.83
GRM6	0	genome.wustl.edu	37	5	178408716	178408716	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	178408716	178408716	T	C	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	missense	c.2576	p.K859R	0.994	pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_6	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262	tier1	-	-	150	0	0.00	121	13	9.70
HDLBP	0	genome.wustl.edu	37	2	242179184	242179185	+	In_Frame_Ins	INS	-	-	GTG			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	242179184	242179185	-	GTG	INS	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	in_frame_ins	c.2443_2442	p.814in_frame_insH	1.000:0.998	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1			115	0	0.00	75	11	12.79
HERC1	0	genome.wustl.edu	37	15	63935637	63935637	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	63935637	63935637	C	A	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	missense	c.11297	p.G3766V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	tier1	-	-	39	0	0.00	27	13	32.50
HIST1H1E	0	genome.wustl.edu	37	6	26157095	26157095	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	26157095	26157095	G	C	SNP	HIST1H1E	ENST00000304218	human	ensembl	74_37	+1	known	missense	c.477	p.K159N	1.000	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1E	HGNC	ENSG00000168298	tier1	-	-	30	0	0.00	13	5	27.78
HK1	0	genome.wustl.edu	37	10	71142292	71142292	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	71142292	71142292	G	A	SNP	HK1	ENST00000448642	human	ensembl	74_37	+1	known	missense	c.1420	p.D474N	0.999	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK1	HGNC	ENSG00000156515	tier1	-	-	125	0	0.00	84	16	16.00
HPDL	0	genome.wustl.edu	37	1	45793415	45793415	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	45793415	45793415	C	A	SNP	HPDL	ENST00000334815	human	ensembl	74_37	+1	known	missense	c.595	p.L199M	0.403	pirsf_4OHPhenylPyrv_dOase	pirsf_4OHPhenylPyrv_dOase	-	no_errors	HPDL	HGNC	ENSG00000186603	tier1	-	-	96	0	0.00	122	8	6.15
HSPA2	0	genome.wustl.edu	37	14	65008403	65008403	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	65008403	65008403	C	T	SNP	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	missense	c.836	p.S279L	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803				61	0	0.00	39	4	9.30
HTR3B	0	genome.wustl.edu	37	11	113803163	113803163	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	113803163	113803163	A	C	SNP	HTR3B	ENST00000260191	human	ensembl	74_37	+1	known	missense	c.521	p.K174T	0.656	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_5HT3_rcpt_B,prints_5HT3_rcpt,prints_Neur_channel,prints_5HT3_rcpt_A,tigrfam_Neur_channel	-	no_errors	HTR3B	HGNC	ENSG00000149305	tier1	-	-	118	0	0.00	86	23	21.10
HYAL2	0	genome.wustl.edu	37	3	50355686	50355686	+	Silent	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	50355686	50355686	G	C	SNP	HYAL2	ENST00000357750	human	ensembl	74_37	-1	known	silent	c.1296	p.G432	1.000	pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL2	HGNC	ENSG00000068001	tier1	-	-	100	0	0.00	69	9	11.54
HYAL2	0	genome.wustl.edu	37	3	50357644	50357644	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	50357644	50357644	C	T	SNP	HYAL2	ENST00000357750	human	ensembl	74_37	-1	known	missense	c.277	p.G93R	0.000	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL2	HGNC	ENSG00000068001	tier1	-	-	113	0	0.00	44	41	48.24
IARS	0	genome.wustl.edu	37	9	95009793	95009793	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	95009793	95009793	T	G	SNP	IARS	ENST00000375643	human	ensembl	74_37	-1	known	missense	c.2657	p.N886T	1.000	superfamily_tRNAsynth_1a_anticodon-bd	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Ile-tRNA-ligase,tigrfam_Ile-tRNA-ligase	-	no_errors	IARS	HGNC	ENSG00000196305	tier1	-	-	84	0	0.00	41	27	39.71
IFLTD1	0	genome.wustl.edu	37	12	25672806	25672806	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	25672806	25672806	T	G	SNP	IFLTD1	ENST00000458174	human	ensembl	74_37	-1	known	missense	c.1002	p.Q334H	0.000	NULL	pfam_Lamin_tail_dom	-	no_errors	IFLTD1	HGNC	ENSG00000152936	tier1	-	-	115	0	0.00	79	23	22.55
IGSF10	0	genome.wustl.edu	37	3	151165455	151165455	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	151165455	151165455	G	A	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	nonsense	c.2314	p.R772*	0.001	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1	rs148376549	-	108	0	0.00	56	45	44.55
IL22RA2	0	genome.wustl.edu	37	6	137476154	137476154	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	137476154	137476154	G	A	SNP	IL22RA2	ENST00000296980	human	ensembl	74_37	-1	known	silent	c.396	p.Y132	0.639	superfamily_Fibronectin_type3	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3	-	no_errors	IL22RA2	HGNC	ENSG00000164485	tier1	-	-	219	0	0.00	180	21	10.45
INTS6	0	genome.wustl.edu	37	13	51939972	51939972	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	51939972	51939972	T	G	SNP	INTS6	ENST00000311234	human	ensembl	74_37	-1	known	missense	c.2580	p.K860N	0.999	NULL	pfam_VWF_A,pfscan_VWF_A	-	no_errors	INTS6	HGNC	ENSG00000102786	tier1	-	-	37	0	0.00	40	7	14.89
ITGA2B	0	genome.wustl.edu	37	17	42457115	42457115	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	42457115	42457115	G	A	SNP	ITGA2B	ENST00000262407	human	ensembl	74_37	-1	known	missense	c.1820	p.T607M	0.031	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA2B	HGNC	ENSG00000005961	tier1	-	-	196	0	0.00	98	58	37.18
ITGAM	0	genome.wustl.edu	37	16	31283265	31283265	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	31283265	31283265	C	T	SNP	ITGAM	ENST00000544665	human	ensembl	74_37	+1	known	missense	c.656	p.T219M	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896	tier1	-	-	130	0	0.00	87	14	13.86
ITIH5	0	genome.wustl.edu	37	10	7608116	7608116	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	7608116	7608116	C	T	SNP	ITIH5	ENST00000256861	human	ensembl	74_37	-1	known	missense	c.2404	p.G802S	1.000	pfam_ITI_HC_C	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH5	HGNC	ENSG00000123243	tier1	-	-	71	0	0.00	62	26	29.55
KIAA0408	0	genome.wustl.edu	37	6	127771272	127771272	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	127771272	127771272	C	G	SNP	KIAA0408	ENST00000483725	human	ensembl	74_37	-1	novel	missense	c.361	p.E121Q	0.819	NULL	NULL	-	no_errors	KIAA0408	HGNC	ENSG00000189367	tier1	-	-	165	0	0.00	99	72	42.11
KIAA1549L	0	genome.wustl.edu	37	11	33565307	33565307	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	33565307	33565307	G	C	SNP	KIAA1549L	ENST00000389726	human	ensembl	74_37	+1	known	missense	c.1307	p.S436T	0.599	NULL	NULL	-	no_errors	KIAA1549L	HGNC	ENSG00000110427	tier1	-	-	149	0	0.00	93	438	82.49
KIAA1804	0	genome.wustl.edu	37	1	233512265	233512265	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	233512265	233512265	A	G	SNP	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	missense	c.1916	p.D639G	1.000	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674	tier1	-	-	86	0	0.00	57	14	19.44
KIRREL3	0	genome.wustl.edu	37	11	126301404	126301404	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	126301404	126301404	C	T	SNP	KIRREL3	ENST00000525144	human	ensembl	74_37	-1	known	missense	c.1606	p.V536I	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL3	HGNC	ENSG00000149571	tier1	-	-	64	0	0.00	28	5	15.15
KLF12	0	genome.wustl.edu	37	13	74387318	74387318	+	Silent	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	74387318	74387318	C	A	SNP	KLF12	ENST00000377666	human	ensembl	74_37	-1	known	silent	c.777	p.T259	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF12	HGNC	ENSG00000118922	tier1	-	-	105	0	0.00	88	8	8.33
KLHL7	0	genome.wustl.edu	37	7	23164761	23164761	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	23164761	23164761	A	G	SNP	KLHL7	ENST00000339077	human	ensembl	74_37	+1	known	missense	c.412	p.K138E	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550	tier1	-	-	111	0	0.00	92	15	14.02
LARP4B	0	genome.wustl.edu	37	10	875402	875402	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	875402	875402	G	A	SNP	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	nonsense	c.1048	p.Q350*	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929	tier1	-	-	80	0	0.00	81	17	17.17
LINC00969	0	genome.wustl.edu	37	3	195410871	195410871	+	RNA	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	195410871	195410871	G	A	SNP	LINC00969	ENST00000414625	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00969	HGNC	ENSG00000242086	tier1	-	-	11	0	0.00	12	5	29.41
LOC100996870	0	genome.wustl.edu	37	9	66459813	66459813	+	RNA	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	66459813	66459813	G	A	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113	tier1	rs10752517	-	23	0	0.00	21	5	19.23
LOC100996870	0	genome.wustl.edu	37	9	66459862	66459862	+	RNA	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	66459862	66459862	T	C	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.133	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113	tier1	-	-	38	0	0.00	22	4	15.38
LOC101927806	0	genome.wustl.edu	37	1	17199996	17199997	+	RNA	INS	-	-	GG			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	17199996	17199997	-	GG	INS	LOC101927806	ENST00000453554	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.002	-	-	-	no_errors	U1	RFAM	ENSG00000228549	tier1			10	0	0.00	7	4	36.36
LRRK1	0	genome.wustl.edu	37	15	101589894	101589894	+	Silent	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	101589894	101589894	A	G	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	silent	c.3345	p.G1115	0.453	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	108	0	0.00	91	14	13.33
LRRTM1	0	genome.wustl.edu	37	2	80530256	80530256	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	80530256	80530256	G	A	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	missense	c.689	p.P230L	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951	tier1	-	-	234	0	0.00	145	20	12.12
LY6D	0	genome.wustl.edu	37	8	143866833	143866833	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	143866833	143866833	G	A	SNP	LY6D	ENST00000301263	human	ensembl	74_37	-1	known	missense	c.191	p.A64V	0.000	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LY6D	HGNC	ENSG00000167656	tier1	-	-	78	0	0.00	69	25	26.60
MAGEB18	0	genome.wustl.edu	37	X	26157988	26157988	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	26157988	26157988	C	T	SNP	MAGEB18	ENST00000325250	human	ensembl	74_37	+1	known	missense	c.886	p.P296S	0.077	pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB18	HGNC	ENSG00000176774	tier1	-	-	34	0	0.00	11	16	59.26
MAGI1	0	genome.wustl.edu	37	3	65464281	65464281	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	65464281	65464281	T	C	SNP	MAGI1	ENST00000402939	human	ensembl	74_37	-1	known	missense	c.743	p.N248S	1.000	smart_GK/Ca_channel_bsu	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI1	HGNC	ENSG00000151276	tier1	-	-	197	0	0.00	104	70	40.23
MAP4K1	0	genome.wustl.edu	37	19	39088187	39088187	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	39088187	39088187	G	A	SNP	MAP4K1	ENST00000591517	human	ensembl	74_37	-1	known	missense	c.1717	p.R573W	0.996	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP4K1	HGNC	ENSG00000104814	tier1	-	-	116	0	0.00	85	39	31.45
MDN1	0	genome.wustl.edu	37	6	90403852	90403852	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	90403852	90403852	C	T	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	silent	c.9822	p.L3274	0.888	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1	-	-	163	0	0.00	112	22	16.42
MGAT5	0	genome.wustl.edu	37	2	135027986	135027986	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	135027986	135027986	G	C	SNP	MGAT5	ENST00000281923	human	ensembl	74_37	+1	known	missense	c.271	p.D91H	1.000	NULL	NULL	-	no_errors	MGAT5	HGNC	ENSG00000152127	tier1	-	-	114	0	0.00	103	11	9.65
MGAT5	0	genome.wustl.edu	37	2	135027982	135027985	+	Frame_Shift_Del	DEL	ATTA	ATTA	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	ATTA	ATTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	135027982	135027985	ATTA	0	DEL	MGAT5	ENST00000281923	human	ensembl	74_37	+1	known	frame_shift_del	c.267_270	p.L90fs	0.562:0.571:1.000:1.000	NULL	NULL	-	no_errors	MGAT5	HGNC	ENSG00000152127				113	0	0.00	105	10	8.70
MLLT6	0	genome.wustl.edu	37	17	36881037	36881037	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	36881037	36881037	G	A	SNP	MLLT6	ENST00000325718	human	ensembl	74_37	+1	known	silent	c.3048	p.A1016	0.740	NULL	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT6	HGNC	ENSG00000108292	tier1	-	-	23	0	0.00	18	6	25.00
MMP12	0	genome.wustl.edu	37	11	102738680	102738680	+	RNA	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	102738680	102738680	C	T	SNP	MMP12	ENST00000326227	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MMP12	HGNC	ENSG00000110347	tier1	rs201987840	-	31	0	0.00	15	8	34.78
MMP21	0	genome.wustl.edu	37	10	127462501	127462501	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	127462501	127462501	G	A	SNP	MMP21	ENST00000368808	human	ensembl	74_37	-1	known	missense	c.596	p.A199V	0.989	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,prints_Pept_M10A	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP21	HGNC	ENSG00000154485	tier1	-	-	65	0	0.00	51	15	22.39
MROH8	0	genome.wustl.edu	37	20	35738678	35738680	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	35738678	35738680	TCT	-	DEL	MROH8	ENST00000400441	human	ensembl	74_37	-1	known	in_frame_del	c.2895_2893	p.R965in_frame_del	1.000:1.000:1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH8	HGNC	ENSG00000101353	tier1			233	0	0.00	362	40	9.95
MT-ND5	0	genome.wustl.edu	37	MT	13757	13757	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	MT	13757	13757	C	T	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.1421	p.P474L	NULL	pfam_NADH_DH_su5_C,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	57	0	0.00	35	121	77.56
MTHFD1	0	genome.wustl.edu	37	14	64891553	64891553	+	Silent	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	64891553	64891553	G	C	SNP	MTHFD1	ENST00000216605	human	ensembl	74_37	+1	known	silent	c.759	p.V253	1.000	pfam_THF_DH/CycHdrlase_NAD-bd_dom,prints_THF_DH/CycHdrlase	pfam_Formate_THF_ligase,pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,superfamily_P-loop_NTPase,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD1	HGNC	ENSG00000100714	tier1	-	-	51	0	0.00	34	5	12.82
MTUS2	0	genome.wustl.edu	37	13	29601027	29601027	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	29601027	29601027	A	C	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.2222	p.K741T	1.000	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	tier1	-	-	65	0	0.00	58	12	17.14
MUC4	0	genome.wustl.edu	37	3	195508163	195508163	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	195508163	195508163	T	G	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.10288	p.T3430P	0.001	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	rs200073211	-	11	0	0.00	5	4	44.44
MUC5B	0	genome.wustl.edu	37	11	1265151	1265151	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	1265151	1265151	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.7050	p.A2350	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	26	0	0.00	9	11	55.00
MUC5B	0	genome.wustl.edu	37	11	1267665	1267665	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	1267665	1267665	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.9564	p.S3188	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	215	0	0.00	97	65	40.12
MUC5B	0	genome.wustl.edu	37	11	1269786	1269786	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	1269786	1269786	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.11685	p.S3895	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	154	0	0.00	71	29	29.00
MUC7	0	genome.wustl.edu	37	4	71347381	71347381	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	71347381	71347381	C	G	SNP	MUC7	ENST00000304887	human	ensembl	74_37	+1	known	missense	c.920	p.P307R	0.109	NULL	NULL	-	no_errors	MUC7	HGNC	ENSG00000171195	tier1	-	-	335	0	0.00	195	20	9.26
MYBPC3	0	genome.wustl.edu	37	11	47372950	47372950	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	47372950	47372950	G	A	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	silent	c.132	p.R44	0.024	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571	tier1	-	-	27	0	0.00	27	14	34.15
MYOM2	0	genome.wustl.edu	37	8	2092797	2092797	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	2092797	2092797	C	T	SNP	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	silent	c.4290	p.D1430	0.197	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448	tier1	-	-	111	0	0.00	50	43	45.74
NALCN	0	genome.wustl.edu	37	13	101795569	101795569	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	101795569	101795569	C	G	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.1980	p.E660D	0.949	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	tier1	-	-	73	0	0.00	45	13	22.41
NDST3	0	genome.wustl.edu	37	4	119035974	119035974	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	119035974	119035974	A	C	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.1083	p.E361D	1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100	tier1	-	-	108	0	0.00	60	8	11.76
NFATC2	0	genome.wustl.edu	37	20	50140551	50140551	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	50140551	50140551	T	C	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.229	p.S77G	1.000	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096	tier1	-	-	165	0	0.00	164	42	20.39
NKX2-3	0	genome.wustl.edu	37	10	101295002	101295002	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	101295002	101295002	C	T	SNP	NKX2-3	ENST00000344586	human	ensembl	74_37	+1	known	missense	c.619	p.R207W	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-3	HGNC	ENSG00000119919	tier1	-	-	42	0	0.00	33	10	23.26
NLRC3	0	genome.wustl.edu	37	16	3592702	3592702	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	3592702	3592702	G	A	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.3151	p.R1051W	0.996	smart_Leu-rich_rpt_RNase_inh_sub-typ	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984	tier1	-	-	21	0	0.00	10	8	44.44
NPC1	0	genome.wustl.edu	37	18	21136494	21136494	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	18	21136494	21136494	C	T	SNP	NPC1	ENST00000269228	human	ensembl	74_37	-1	known	missense	c.1039	p.V347I	1.000	tigrfam_NP_C_type	pfam_Patched,pfam_MMPL_dom,pfscan_SSD,tigrfam_NP_C_type	-	no_errors	NPC1	HGNC	ENSG00000141458	tier1	-	-	83	0	0.00	103	7	6.31
NPTX2	0	genome.wustl.edu	37	7	98257773	98257773	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	98257773	98257773	C	G	SNP	NPTX2	ENST00000265634	human	ensembl	74_37	+1	known	missense	c.1128	p.F376L	1.000	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTX2	HGNC	ENSG00000106236	tier1	-	-	27	0	0.00	27	10	26.32
NRAS	0	genome.wustl.edu	37	1	115251215	115251216	+	Frame_Shift_Ins	INS	-	-	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	115251215	115251216	-	T	INS	NRAS	ENST00000369535	human	ensembl	74_37	-1	known	frame_shift_ins	c.511_510	p.L170fs	1.000:0.991	superfamily_P-loop_NTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	NRAS	HGNC	ENSG00000213281	tier1			179	0	0.00	123	67	35.26
NRXN3	0	genome.wustl.edu	37	14	79454401	79454401	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	79454401	79454401	A	C	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.3146	p.N1049T	1.000	superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	tier1	-	-	98	0	0.00	62	14	18.42
NSUN2	0	genome.wustl.edu	37	5	6604732	6604732	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	6604732	6604732	G	A	SNP	NSUN2	ENST00000264670	human	ensembl	74_37	-1	known	missense	c.1804	p.R602W	1.000	NULL	pfam_Fmu/NOL1/Nop2p,prints_RCMT,prints_RCMT_NCL1	-	no_errors	NSUN2	HGNC	ENSG00000037474	tier1	-	-	112	0	0.00	70	34	32.69
NUP160	0	genome.wustl.edu	37	11	47830054	47830054	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	47830054	47830054	G	C	SNP	NUP160	ENST00000378460	human	ensembl	74_37	-1	known	missense	c.2269	p.Q757E	1.000	NULL	pfam_Nucleoporin_Nup160	-	no_errors	NUP160	HGNC	ENSG00000030066	tier1	-	-	81	0	0.00	66	17	20.48
NUP214	0	genome.wustl.edu	37	9	134098270	134098270	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	134098270	134098270	G	A	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.5858	p.G1953E	1.000	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883	tier1	-	-	131	0	0.00	72	40	35.71
OOEP-AS1	0	genome.wustl.edu	37	6	74079540	74079540	+	RNA	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	74079540	74079540	C	T	SNP	OOEP-AS1	ENST00000445350	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OOEP-AS1	HGNC	ENSG00000231332	tier1	-	-	107	0	0.00	60	22	26.51
OR10T2	0	genome.wustl.edu	37	1	158368690	158368690	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	158368690	158368690	G	A	SNP	OR10T2	ENST00000334438	human	ensembl	74_37	-1	known	silent	c.567	p.A189	0.983	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10T2	HGNC	ENSG00000186306	tier1	-	-	68	0	0.00	62	10	13.89
OR11L1	0	genome.wustl.edu	37	1	248004834	248004834	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	248004834	248004834	C	T	SNP	OR11L1	ENST00000355784	human	ensembl	74_37	-1	known	missense	c.365	p.R122H	0.996	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR11L1	HGNC	ENSG00000197591	tier1	-	-	70	0	0.00	53	5	8.62
OR2T8	0	genome.wustl.edu	37	1	248084629	248084629	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	248084629	248084629	A	T	SNP	OR2T8	ENST00000319968	human	ensembl	74_37	+1	known	missense	c.310	p.T104S	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T8	HGNC	ENSG00000177462	tier1	rs201244365	-	17	0	0.00	12	5	27.78
OR52B2	0	genome.wustl.edu	37	11	6190619	6190619	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	6190619	6190619	T	G	SNP	OR52B2	ENST00000530810	human	ensembl	74_37	-1	known	missense	c.938	p.K313T	0.226	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52B2	HGNC	ENSG00000255307	tier1	-	-	112	0	0.00	77	13	14.44
OR6N1	0	genome.wustl.edu	37	1	158736313	158736313	+	Silent	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	158736313	158736313	G	T	SNP	OR6N1	ENST00000335094	human	ensembl	74_37	-1	known	silent	c.160	p.R54	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6N1	HGNC	ENSG00000197403	tier1	-	-	106	0	0.00	64	29	31.18
OR8B2	0	genome.wustl.edu	37	11	124252389	124252389	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	124252389	124252389	A	G	SNP	OR8B2	ENST00000375013	human	ensembl	74_37	-1	known	missense	c.851	p.L284P	0.489	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8B2	HGNC	ENSG00000204293	tier1	-	-	166	0	0.00	148	51	25.63
PABPC3	0	genome.wustl.edu	37	13	25670410	25670410	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	25670410	25670410	C	T	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	missense	c.74	p.A25V	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846	tier1	-	-	159	0	0.00	84	46	35.11
PAPPA2	0	genome.wustl.edu	37	1	176564058	176564058	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	176564058	176564058	C	A	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.1318	p.H440N	0.689	superfamily_ConA-like_lec_gl_sf	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	181	0	0.00	99	40	28.57
PCDH9	0	genome.wustl.edu	37	13	67801206	67801206	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	67801206	67801206	C	G	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	missense	c.1367	p.R456T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226	tier1	-	-	113	0	0.00	84	24	22.22
PCDHA10	0	genome.wustl.edu	37	5	140236619	140236619	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	140236619	140236619	T	C	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	missense	c.986	p.M329T	0.184	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120	tier1	-	-	161	0	0.00	96	64	40.00
PCDHB4	0	genome.wustl.edu	37	5	140503423	140503423	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	140503423	140503423	G	A	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	missense	c.1843	p.G615S	0.007	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818	tier1	-	-	189	0	0.00	121	75	38.27
PCNX	0	genome.wustl.edu	37	14	71444290	71444290	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	71444290	71444290	C	A	SNP	PCNX	ENST00000304743	human	ensembl	74_37	+1	known	missense	c.1236	p.S412R	0.991	NULL	pfam_Pecanex	-	no_errors	PCNX	HGNC	ENSG00000100731	tier1	-	-	130	0	0.00	88	12	12.00
PDYN	0	genome.wustl.edu	37	20	1961099	1961099	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	1961099	1961099	C	T	SNP	PDYN	ENST00000217305	human	ensembl	74_37	-1	known	missense	c.635	p.R212Q	1.000	prints_Proenkphlin_B	pfam_Opioid_neupept,prints_Proenkphlin_B,prints_Opioid_neupept	-	no_errors	PDYN	HGNC	ENSG00000101327	tier1	rs138498390	-	255	0	0.00	242	50	17.12
PEG3	0	genome.wustl.edu	37	19	57326025	57326025	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	57326025	57326025	G	T	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.3785	p.A1262D	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	-	-	77	0	0.00	53	13	19.70
PEG3	0	genome.wustl.edu	37	19	57327776	57327776	+	Silent	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	57327776	57327776	A	G	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	silent	c.2034	p.T678	0.240	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	-	-	213	0	0.00	170	18	9.57
PF4	0	genome.wustl.edu	37	4	74846961	74846961	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	74846961	74846961	G	A	SNP	PF4	ENST00000296029	human	ensembl	74_37	-1	known	missense	c.266	p.P89L	0.001	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	PF4	HGNC	ENSG00000163737	tier1	-	-	89	0	0.00	55	16	22.54
PHLPP2	0	genome.wustl.edu	37	16	71736549	71736549	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	71736549	71736549	C	A	SNP	PHLPP2	ENST00000356272	human	ensembl	74_37	-1	known	nonsense	c.370	p.E124*	1.000	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom	-	no_errors	PHLPP2	HGNC	ENSG00000040199	tier1	-	-	154	0	0.00	90	23	20.00
PLEKHM2	0	genome.wustl.edu	37	1	16060480	16060480	+	RNA	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	16060480	16060480	C	T	SNP	PLEKHM2	ENST00000477849	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PLEKHM2	HGNC	ENSG00000116786	tier1	-	-	15	0	0.00	19	12	38.71
PLK3	0	genome.wustl.edu	37	1	45270790	45270791	+	RNA	INS	-	-	AAAG			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	45270790	45270791	-	AAAG	INS	PLK3	ENST00000461769	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005:0.008	-	-	-	no_errors	PLK3	HGNC	ENSG00000173846	tier1			14	0	0.00	6	4	40.00
PNPLA4	0	genome.wustl.edu	37	X	7880119	7880119	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	7880119	7880119	T	G	SNP	PNPLA4	ENST00000381042	human	ensembl	74_37	-1	known	missense	c.427	p.S143R	1.000	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA4	HGNC	ENSG00000006757	tier1	-	-	70	0	0.00	92	24	20.69
POLH	0	genome.wustl.edu	37	6	43582081	43582081	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	43582081	43582081	G	A	SNP	POLH	ENST00000372236	human	ensembl	74_37	+1	known	silent	c.1929	p.P643	0.034	pirsf_DNA_pol_eta	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,superfamily_DNA_pol_Y-fam_little_finger,pirsf_DNA_pol_eta,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	POLH	HGNC	ENSG00000170734	tier1	-	-	317	0	0.00	254	41	13.85
PPFIA2	0	genome.wustl.edu	37	12	82147836	82147836	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	82147836	82147836	G	C	SNP	PPFIA2	ENST00000549396	human	ensembl	74_37	-1	known	missense	c.165	p.S55R	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220	tier1	-	-	45	0	0.00	41	14	25.45
PPP1R11	0	genome.wustl.edu	37	6	30036476	30036479	+	Splice_Site	DEL	GTGA	GTGA	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	GTGA	GTGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	30036476	30036479	GTGA	-	DEL	PPP1R11	ENST00000376772	human	ensembl	74_37	+1	known	splice_site_del	c.178+1_178+1	e2+1	1.000:1.000:1.000:1.000	-	-	-	no_errors	PPP1R11	HGNC	ENSG00000204619	tier1			71	0	0.00	69	10	12.66
PPP2R3A	0	genome.wustl.edu	37	3	135721796	135721796	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	135721796	135721796	A	G	SNP	PPP2R3A	ENST00000264977	human	ensembl	74_37	+1	known	missense	c.1456	p.K486E	0.003	NULL	pfscan_EF_hand_dom	-	no_errors	PPP2R3A	HGNC	ENSG00000073711	tier1	-	-	106	0	0.00	114	17	12.98
PRAMEF6	0	genome.wustl.edu	37	1	13001384	13001384	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	13001384	13001384	A	G	SNP	PRAMEF6	ENST00000355096	human	ensembl	74_37	-1	known	missense	c.299	p.L100P	0.007	NULL	NULL	-	no_errors	PRAMEF6	HGNC	ENSG00000232423	tier1	-	-	241	0	0.00	270	35	11.48
PRDM16	0	genome.wustl.edu	37	1	3322163	3322163	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	3322163	3322163	C	T	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	silent	c.1137	p.S379	0.066	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	tier1	-	-	168	0	0.00	156	54	25.71
PRKCQ	0	genome.wustl.edu	37	10	6521004	6521004	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	6521004	6521004	C	A	SNP	PRKCQ	ENST00000263125	human	ensembl	74_37	-1	known	missense	c.1303	p.A435S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Prot_kin_PKC_delta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675	tier1	-	-	98	0	0.00	71	20	21.98
PROS1	0	genome.wustl.edu	37	3	93595984	93595984	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	93595984	93595984	T	C	SNP	PROS1	ENST00000394236	human	ensembl	74_37	-1	known	missense	c.1696	p.S566G	0.005	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	PROS1	HGNC	ENSG00000184500	tier1	-	-	74	0	0.00	52	51	49.51
PRRX1	0	genome.wustl.edu	37	1	170688908	170688908	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	170688908	170688908	C	T	SNP	PRRX1	ENST00000239461	human	ensembl	74_37	+1	known	nonsense	c.283	p.R95*	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PRRX1	HGNC	ENSG00000116132	tier1	-	-	74	0	0.00	37	30	44.78
PSMB11	0	genome.wustl.edu	37	14	23512058	23512058	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	23512058	23512058	C	T	SNP	PSMB11	ENST00000408907	human	ensembl	74_37	+1	known	silent	c.624	p.A208	0.045	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB11	HGNC	ENSG00000222028	tier1	-	-	69	0	0.00	69	5	6.76
PSMB9	0	genome.wustl.edu	37	6	32825114	32825116	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	32825114	32825116	CAG	-	DEL	PSMB9	ENST00000374859	human	ensembl	74_37	+1	known	in_frame_del	c.203_205	p.A70in_frame_del	0.984:0.049:0.995	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB9	HGNC	ENSG00000240065	tier1			107	0	0.00	66	9	12.00
PTCHD2	0	genome.wustl.edu	37	1	11579855	11579855	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	11579855	11579855	C	T	SNP	PTCHD2	ENST00000294484	human	ensembl	74_37	+1	known	silent	c.2118	p.R706	0.997	pfam_Patched	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624	tier1	-	-	206	0	0.00	199	49	19.76
PTPN11	0	genome.wustl.edu	37	12	112892433	112892433	+	Nonsense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	112892433	112892433	T	G	SNP	PTPN11	ENST00000351677	human	ensembl	74_37	+1	known	nonsense	c.591	p.Y197*	1.000	pfam_SH2,smart_SH2,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,prints_SH2	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_SH2,smart_SH2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_SH2	-	no_errors	PTPN11	HGNC	ENSG00000179295	tier1	rs76982592	-	67	0	0.00	96	9	8.57
PTPN13	0	genome.wustl.edu	37	4	87684044	87684044	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	87684044	87684044	C	T	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	missense	c.3718	p.R1240W	0.985	pirsf_Tyr_Pase_non-rcpt_typ-13	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629	tier1	-	-	119	0	0.00	73	5	6.41
PTPRS	0	genome.wustl.edu	37	19	5223252	5223252	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	5223252	5223252	G	A	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	missense	c.2554	p.R852C	0.954	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426	tier1	-	-	10	0	0.00	11	6	35.29
PWP1	0	genome.wustl.edu	37	12	108082531	108082531	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	108082531	108082531	G	A	SNP	PWP1	ENST00000412830	human	ensembl	74_37	+1	known	missense	c.271	p.E91K	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PWP1	HGNC	ENSG00000136045	tier1	-	-	49	0	0.00	53	15	22.06
PZP	0	genome.wustl.edu	37	12	9307391	9307391	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	9307391	9307391	C	G	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	missense	c.3595	p.V1199L	0.000	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838	tier1	-	-	78	0	0.00	59	16	21.33
QRFPR	0	genome.wustl.edu	37	4	122301574	122301574	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	122301574	122301574	G	A	SNP	QRFPR	ENST00000394427	human	ensembl	74_37	-1	known	missense	c.229	p.R77C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	QRFPR	HGNC	ENSG00000186867	tier1	-	-	134	0	0.00	76	21	21.65
RASGRP4	0	genome.wustl.edu	37	19	38905604	38905604	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	38905604	38905604	C	T	SNP	RASGRP4	ENST00000587738	human	ensembl	74_37	-1	known	missense	c.1114	p.G372S	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_DAG/PE-bd	-	no_errors	RASGRP4	HGNC	ENSG00000171777	tier1	-	-	45	0	0.00	26	8	23.53
SAP130	0	genome.wustl.edu	37	2	128712790	128712790	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	128712790	128712790	G	A	SNP	SAP130	ENST00000357702	human	ensembl	74_37	-1	known	missense	c.2270	p.P757L	0.993	NULL	NULL	-	no_errors	SAP130	HGNC	ENSG00000136715	tier1	rs199999073	-	178	0	0.00	109	21	16.15
SCAMP5	0	genome.wustl.edu	37	15	75308941	75308941	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	75308941	75308941	C	T	SNP	SCAMP5	ENST00000562212	human	ensembl	74_37	+1	known	silent	c.144	p.S48	1.000	pfam_SCAMP	pfam_SCAMP	-	no_errors	SCAMP5	HGNC	ENSG00000198794	tier1	-	-	120	0	0.00	95	17	15.18
SCAND3	0	genome.wustl.edu	37	6	28542681	28542681	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	28542681	28542681	A	C	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	missense	c.1801	p.L601V	0.989	NULL	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040	tier1	-	-	54	0	0.00	30	24	44.44
SCARF1	0	genome.wustl.edu	37	17	1538829	1538829	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	1538829	1538829	C	T	SNP	SCARF1	ENST00000571272	human	ensembl	74_37	-1	known	missense	c.1679	p.R560H	0.547	NULL	pfam_EGF_laminin,pfam_EGF_extracell,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	SCARF1	HGNC	ENSG00000074660	tier1	-	-	151	0	0.00	109	14	11.38
SCN7A	0	genome.wustl.edu	37	2	167301492	167301492	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	167301492	167301492	T	G	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	missense	c.1406	p.K469T	0.023	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546	tier1	-	-	36	0	0.00	29	9	23.68
SEC24A	0	genome.wustl.edu	37	5	134010343	134010343	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	134010343	134010343	C	T	SNP	SEC24A	ENST00000398844	human	ensembl	74_37	+1	known	nonsense	c.856	p.R286*	0.991	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24A	HGNC	ENSG00000113615	tier1	-	-	119	0	0.00	99	9	8.26
SELL	0	genome.wustl.edu	37	1	169672428	169672428	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	169672428	169672428	C	G	SNP	SELL	ENST00000236147	human	ensembl	74_37	-1	known	missense	c.959	p.G320A	0.992	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pirsf_L-selectin,pfscan_Sushi_SCR_CCP	pfam_C-type_lectin,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_C-type_lectin,smart_EG-like_dom,smart_Sushi_SCR_CCP,pirsf_L-selectin,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELL	HGNC	ENSG00000188404	tier1	-	-	35	0	0.00	58	9	13.43
SFTPA1	0	genome.wustl.edu	37	10	81371633	81371633	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	81371633	81371633	G	T	SNP	SFTPA1	ENST00000419470	human	ensembl	74_37	+1	known	missense	c.97	p.A33S	0.000	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	SFTPA1	HGNC	ENSG00000122852	tier1	-	-	310	0	0.00	194	47	19.34
SLC18A3	0	genome.wustl.edu	37	10	50820023	50820023	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	50820023	50820023	C	T	SNP	SLC18A3	ENST00000374115	human	ensembl	74_37	+1	known	missense	c.1237	p.H413Y	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A3	HGNC	ENSG00000187714	tier1	-	-	77	0	0.00	52	11	17.46
SLC24A5	0	genome.wustl.edu	37	15	48429130	48429130	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	48429130	48429130	A	G	SNP	SLC24A5	ENST00000341459	human	ensembl	74_37	+1	known	missense	c.841	p.S281G	1.000	tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A5	HGNC	ENSG00000188467	tier1	-	-	158	0	0.00	108	24	18.18
SLC25A21	0	genome.wustl.edu	37	14	37180603	37180603	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	37180603	37180603	T	C	SNP	SLC25A21	ENST00000331299	human	ensembl	74_37	-1	known	missense	c.523	p.T175A	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A21	HGNC	ENSG00000183032	tier1	-	-	96	0	0.00	76	13	14.61
SLC39A12	0	genome.wustl.edu	37	10	18250551	18250551	+	Silent	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	18250551	18250551	T	C	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	silent	c.303	p.N101	0.115	NULL	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482	tier1	-	-	135	0	0.00	87	66	43.14
SLC44A2	0	genome.wustl.edu	37	19	10747210	10747210	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	10747210	10747210	C	T	SNP	SLC44A2	ENST00000335757	human	ensembl	74_37	+1	known	missense	c.1445	p.P482L	1.000	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A2	HGNC	ENSG00000129353	tier1	-	-	115	0	0.00	72	26	26.53
SLC5A5	0	genome.wustl.edu	37	19	18001748	18001748	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	18001748	18001748	C	T	SNP	SLC5A5	ENST00000222248	human	ensembl	74_37	+1	known	missense	c.1705	p.R569W	0.003	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A5	HGNC	ENSG00000105641	tier1	rs201835225	-	256	0	0.00	142	69	32.70
SMAD1	0	genome.wustl.edu	37	4	146468031	146468031	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	146468031	146468031	A	G	SNP	SMAD1	ENST00000302085	human	ensembl	74_37	+1	known	missense	c.952	p.N318D	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD1	HGNC	ENSG00000170365	tier1	-	-	124	0	0.00	111	8	6.72
SOGA1	0	genome.wustl.edu	37	20	35444681	35444681	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	35444681	35444681	C	A	SNP	SOGA1	ENST00000237536	human	ensembl	74_37	-1	known	missense	c.1164	p.L388F	1.000	pfam_SOGA	pfam_SOGA	-	no_errors	SOGA1	HGNC	ENSG00000149639	tier1	-	-	123	0	0.00	88	77	46.67
SORCS2	0	genome.wustl.edu	37	4	7728538	7728538	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	7728538	7728538	C	T	SNP	SORCS2	ENST00000507866	human	ensembl	74_37	+1	known	missense	c.2777	p.T926M	0.876	superfamily_PKD_dom	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	SORCS2	HGNC	ENSG00000184985	tier1	-	-	185	0	0.00	84	38	31.15
SPEG	0	genome.wustl.edu	37	2	220308750	220308750	+	Splice_Site	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	220308750	220308750	A	C	SNP	SPEG	ENST00000420132	human	ensembl	74_37	+1	known	splice_site	c.162-2	e3-2	1.000	-	-	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1	-	-	51	0	0.00	30	5	14.29
SPEG	0	genome.wustl.edu	37	2	220309612	220309612	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	220309612	220309612	G	A	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	missense	c.544	p.E182K	0.998	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1	-	-	191	0	0.00	129	33	20.37
SPON2	0	genome.wustl.edu	37	4	1164265	1164265	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	1164265	1164265	G	C	SNP	SPON2	ENST00000290902	human	ensembl	74_37	-1	known	missense	c.736	p.Q246E	0.047	NULL	pfam_Spondin_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Spondin_N,pfscan_Thrombospondin_1_rpt	-	no_errors	SPON2	HGNC	ENSG00000159674	tier1	-	-	174	0	0.00	123	43	25.90
ST6GAL1	0	genome.wustl.edu	37	3	186761057	186761057	+	Nonsense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	186761057	186761057	C	G	SNP	ST6GAL1	ENST00000169298	human	ensembl	74_37	+1	known	nonsense	c.566	p.S189*	0.984	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST6GAL1	HGNC	ENSG00000073849	tier1	-	-	255	0	0.00	210	44	17.25
STEAP2	0	genome.wustl.edu	37	7	89856419	89856419	+	Silent	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	89856419	89856419	T	C	SNP	STEAP2	ENST00000287908	human	ensembl	74_37	+1	known	silent	c.627	p.F209	1.000	NULL	pfam_Fe3_Rdtase_TM_dom	-	no_errors	STEAP2	HGNC	ENSG00000157214	tier1	-	-	144	0	0.00	107	21	16.28
TAF6L	0	genome.wustl.edu	37	11	62549652	62549652	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	62549652	62549652	G	A	SNP	TAF6L	ENST00000294168	human	ensembl	74_37	+1	known	missense	c.674	p.R225H	1.000	NULL	pfam_TAF_TATA-bd,pfam_DUF1546,superfamily_Histone-fold,smart_TAF_TATA-bd	-	no_errors	TAF6L	HGNC	ENSG00000162227	tier1	rs138817605	-	180	0	0.00	155	28	15.30
TANC2	0	genome.wustl.edu	37	17	61497971	61497971	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	61497971	61497971	G	A	SNP	TANC2	ENST00000424789	human	ensembl	74_37	+1	known	missense	c.4628	p.R1543Q	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC2	HGNC	ENSG00000170921	tier1	-	-	54	0	0.00	21	24	53.33
TBC1D15	0	genome.wustl.edu	37	12	72266761	72266761	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	72266761	72266761	C	A	SNP	TBC1D15	ENST00000550746	human	ensembl	74_37	+1	known	missense	c.182	p.S61Y	1.000	pfam_DUF3548	pfam_DUF3548,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D15	HGNC	ENSG00000121749	tier1	-	-	178	0	0.00	186	25	11.79
TBC1D32	0	genome.wustl.edu	37	6	121563367	121563367	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	121563367	121563367	G	A	SNP	TBC1D32	ENST00000275159	human	ensembl	74_37	-1	putative	nonsense	c.2137	p.R713*	0.800	NULL	superfamily_Rab-GTPase-TBC_dom	-	no_errors	TBC1D32	HGNC	ENSG00000146350	tier1	-	-	95	0	0.00	64	15	18.99
TBC1D32	0	genome.wustl.edu	37	6	121563368	121563368	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	121563368	121563368	A	T	SNP	TBC1D32	ENST00000275159	human	ensembl	74_37	-1	putative	missense	c.2136	p.N712K	0.813	NULL	superfamily_Rab-GTPase-TBC_dom	-	no_errors	TBC1D32	HGNC	ENSG00000146350	tier1	-	-	97	0	0.00	63	15	19.23
TCERG1L	0	genome.wustl.edu	37	10	133106633	133106633	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	133106633	133106633	C	A	SNP	TCERG1L	ENST00000368642	human	ensembl	74_37	-1	known	missense	c.511	p.A171S	1.000	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1L	HGNC	ENSG00000176769	tier1	-	-	83	0	0.00	55	8	12.70
TECTA	0	genome.wustl.edu	37	11	120996400	120996400	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	120996400	120996400	C	T	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	silent	c.1593	p.D531	0.060	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927	tier1	-	-	308	0	0.00	201	66	24.63
TJP1	0	genome.wustl.edu	37	15	30010507	30010507	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	30010507	30010507	T	G	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	missense	c.3839	p.E1280A	1.000	NULL	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067	tier1	-	-	113	0	0.00	76	10	11.63
TKTL2	0	genome.wustl.edu	37	4	164394749	164394749	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	164394749	164394749	C	T	SNP	TKTL2	ENST00000280605	human	ensembl	74_37	-1	known	silent	c.138	p.A46	0.133	pfam_Transketolase_N	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKTL2	HGNC	ENSG00000151005	tier1	-	-	63	0	0.00	42	8	16.00
TM9SF3	0	genome.wustl.edu	37	10	98287046	98287046	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	98287046	98287046	C	T	SNP	TM9SF3	ENST00000371142	human	ensembl	74_37	-1	known	silent	c.1626	p.K542	1.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF3	HGNC	ENSG00000077147	tier1	-	-	47	0	0.00	38	11	22.45
TMEM26	0	genome.wustl.edu	37	10	63188734	63188734	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	63188734	63188734	C	T	SNP	TMEM26	ENST00000399298	human	ensembl	74_37	-1	known	silent	c.555	p.A185	0.167	pfam_Transmembrane_26	pfam_Transmembrane_26	-	no_errors	TMEM26	HGNC	ENSG00000196932	tier1	-	-	97	0	0.00	67	23	25.56
TMTC1	0	genome.wustl.edu	37	12	29920871	29920871	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	29920871	29920871	G	A	SNP	TMTC1	ENST00000256062	human	ensembl	74_37	-1	known	missense	c.116	p.T39M	0.978	NULL	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687	tier1	-	-	99	0	0.00	97	8	7.62
TNFAIP8	0	genome.wustl.edu	37	5	118728940	118728940	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	118728940	118728940	G	A	SNP	TNFAIP8	ENST00000504771	human	ensembl	74_37	+1	known	missense	c.461	p.R154Q	1.000	pfam_DUF758	pfam_DUF758	-	no_errors	TNFAIP8	HGNC	ENSG00000145779	tier1	-	-	165	0	0.00	92	61	39.87
TNFRSF19	0	genome.wustl.edu	37	13	24234513	24234513	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	24234513	24234513	G	A	SNP	TNFRSF19	ENST00000382258	human	ensembl	74_37	+1	known	missense	c.620	p.R207Q	1.000	prints_TNFR_19	smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_19	-	no_errors	TNFRSF19	HGNC	ENSG00000127863	tier1	-	-	153	0	0.00	127	18	12.41
TNIP3	0	genome.wustl.edu	37	4	122075740	122075740	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	122075740	122075740	T	G	SNP	TNIP3	ENST00000057513	human	ensembl	74_37	-1	known	missense	c.458	p.E153A	0.996	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730	tier1	-	-	127	0	0.00	82	20	19.42
TNR	0	genome.wustl.edu	37	1	175365679	175365679	+	Splice_Site	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	175365679	175365679	C	T	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	splice_site	c.1240+1	e3+1	1.000	-	-	-	no_errors	TNR	HGNC	ENSG00000116147	tier1	-	-	79	0	0.00	80	9	10.11
TP53BP1	0	genome.wustl.edu	37	15	43707879	43707879	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	43707879	43707879	C	T	SNP	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	missense	c.5002	p.V1668I	0.180	smart_BRCT_dom	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369	tier1	-	-	245	0	0.00	136	51	27.13
TRHDE	0	genome.wustl.edu	37	12	73046128	73046128	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	73046128	73046128	T	C	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.2567	p.V856A	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	tier1	-	-	120	0	0.00	95	23	19.49
TRPC4AP	0	genome.wustl.edu	37	20	33637793	33637793	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	33637793	33637793	T	C	SNP	TRPC4AP	ENST00000252015	human	ensembl	74_37	-1	known	missense	c.533	p.E178G	1.000	NULL	pfam_DUF3689	-	no_errors	TRPC4AP	HGNC	ENSG00000100991	tier1	-	-	91	0	0.00	129	40	23.67
TRPV3	0	genome.wustl.edu	37	17	3436156	3436156	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	3436156	3436156	G	A	SNP	TRPV3	ENST00000301365	human	ensembl	74_37	-1	known	missense	c.860	p.T287M	0.998	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	-	no_errors	TRPV3	HGNC	ENSG00000167723	tier1	rs200272068	-	85	0	0.00	34	25	42.37
TSC2	0	genome.wustl.edu	37	16	2106756	2106756	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	2106756	2106756	G	A	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.760	p.E254K	1.000	pfam_Tuberin_N,superfamily_ARM-type_fold	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197	tier1	rs45517126	-	214	0	0.00	128	51	28.49
TSHZ2	0	genome.wustl.edu	37	20	51872386	51872386	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	51872386	51872386	G	A	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	missense	c.2389	p.D797N	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463	tier1	-	-	203	0	0.00	224	48	17.65
TSPYL5	0	genome.wustl.edu	37	8	98289633	98289633	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	98289633	98289633	T	C	SNP	TSPYL5	ENST00000322128	human	ensembl	74_37	-1	known	missense	c.440	p.K147R	0.975	NULL	pfam_NAP_family	-	no_errors	TSPYL5	HGNC	ENSG00000180543	tier1	-	-	144	0	0.00	152	15	8.98
TTF2	0	genome.wustl.edu	37	1	117626657	117626657	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	117626657	117626657	T	C	SNP	TTF2	ENST00000369466	human	ensembl	74_37	+1	known	missense	c.1921	p.S641P	0.999	pfam_SNF2_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_Znf_GRF,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	TTF2	HGNC	ENSG00000116830	tier1	-	-	185	0	0.00	174	16	8.42
TTN	0	genome.wustl.edu	37	2	179399663	179399663	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	179399663	179399663	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.93975	p.E31325	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	66	0	0.00	34	28	45.16
TTN	0	genome.wustl.edu	37	2	179409019	179409019	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	179409019	179409019	C	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.88233	p.Q29411H	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	87	0	0.00	43	26	37.68
TTN	0	genome.wustl.edu	37	2	179482952	179482952	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	179482952	179482952	C	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.39529	p.E13177Q	1.000	superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	212	0	0.00	196	36	15.52
TYRP1	0	genome.wustl.edu	37	9	12709255	12709256	+	RNA	DEL	TG	TG	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	12709255	12709256	TG	-	DEL	TYRP1	ENST00000381142	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006:0.006	-	-	-	no_errors	TYRP1	HGNC	ENSG00000107165	tier1			38	0	0.00	22	13	37.14
TYW5	0	genome.wustl.edu	37	2	200797906	200797906	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	200797906	200797906	T	G	SNP	TYW5	ENST00000354611	human	ensembl	74_37	-1	known	missense	c.832	p.I278L	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	TYW5	HGNC	ENSG00000162971	tier1	-	-	198	0	0.00	256	28	9.86
UCKL1	0	genome.wustl.edu	37	20	62571777	62571777	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	62571777	62571777	G	T	SNP	UCKL1	ENST00000354216	human	ensembl	74_37	-1	known	missense	c.1364	p.T455N	1.000	NULL	pfam_PRK/URK,pfam_CPT,superfamily_P-loop_NTPase,prints_Uridine_kinase,prints_PRK,tigrfam_Uridine_kinase	-	no_errors	UCKL1	HGNC	ENSG00000198276				56	0	0.00	64	5	7.25
UHRF1BP1L	0	genome.wustl.edu	37	12	100452225	100452225	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	100452225	100452225	T	C	SNP	UHRF1BP1L	ENST00000279907	human	ensembl	74_37	-1	known	missense	c.2830	p.K944E	0.904	NULL	NULL	-	no_errors	UHRF1BP1L	HGNC	ENSG00000111647				71	0	0.00	77	5	6.02
USP53	0	genome.wustl.edu	37	4	120213587	120213587	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	120213587	120213587	G	C	SNP	USP53	ENST00000274030	human	ensembl	74_37	+1	known	missense	c.2443	p.D815H	0.009	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP53	HGNC	ENSG00000145390	tier1	-	-	109	0	0.00	48	6	11.11
VPS51	0	genome.wustl.edu	37	11	64875340	64875340	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	64875340	64875340	G	A	SNP	VPS51	ENST00000279281	human	ensembl	74_37	+1	known	missense	c.571	p.V191M	0.963	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_RZZ-complex_Zw10,superfamily_Cullin_repeat-like_dom	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_COG_su2_N,pfam_RZZ-complex_Zw10,superfamily_Cullin_repeat-like_dom	-	no_errors	VPS51	HGNC	ENSG00000149823				11	0	0.00	12	4	25.00
VSIG2	0	genome.wustl.edu	37	11	124618613	124618613	+	Silent	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	124618613	124618613	G	C	SNP	VSIG2	ENST00000326621	human	ensembl	74_37	-1	known	silent	c.633	p.S211	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	VSIG2	HGNC	ENSG00000019102	tier1	-	-	74	0	0.00	58	14	19.44
WDFY3	0	genome.wustl.edu	37	4	85612843	85612843	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	85612843	85612843	T	C	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.9145	p.T3049A	1.000	superfamily_WD40_repeat_dom	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	tier1	-	-	121	0	0.00	103	12	10.43
WDR63	0	genome.wustl.edu	37	1	85555822	85555822	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	85555822	85555822	C	T	SNP	WDR63	ENST00000294664	human	ensembl	74_37	+1	known	missense	c.764	p.T255M	0.114	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR63	HGNC	ENSG00000162643	tier1	rs149091067	-	108	0	0.00	89	10	10.10
WISP1	0	genome.wustl.edu	37	8	134233067	134233067	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	134233067	134233067	G	A	SNP	WISP1	ENST00000250160	human	ensembl	74_37	+1	known	missense	c.593	p.R198H	0.682	pirsf_IGFBP_CNN	pfam_IGFBP-like,pfam_VWF_C,pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	WISP1	HGNC	ENSG00000104415	tier1	rs34782842	-	67	0	0.00	72	24	25.00
XDH	0	genome.wustl.edu	37	2	31625932	31625932	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	31625932	31625932	C	T	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	missense	c.179	p.R60H	0.000	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125	tier1	-	-	181	0	0.00	115	18	13.53
XRCC2	0	genome.wustl.edu	37	7	152345889	152345889	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	152345889	152345889	G	A	SNP	XRCC2	ENST00000359321	human	ensembl	74_37	-1	known	silent	c.681	p.L227	0.990	superfamily_P-loop_NTPase	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	XRCC2	HGNC	ENSG00000196584	tier1	-	-	189	0	0.00	136	36	20.93
ZBTB46	0	genome.wustl.edu	37	20	62421951	62421951	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	62421951	62421951	G	A	SNP	ZBTB46	ENST00000245663	human	ensembl	74_37	-1	known	missense	c.160	p.R54C	1.000	pfam_BTB_POZ,pfam_DUF3342,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_DUF3342,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB46	HGNC	ENSG00000130584	tier1	-	-	92	0	0.00	128	9	6.57
ZC3H8	0	genome.wustl.edu	37	2	113012503	113012503	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	113012503	113012503	G	A	SNP	ZC3H8	ENST00000272570	human	ensembl	74_37	-1	known	missense	c.56	p.A19V	0.015	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H8	HGNC	ENSG00000144161	tier1	-	-	47	0	0.00	42	22	34.38
ZDHHC14	0	genome.wustl.edu	37	6	158093811	158093811	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	158093811	158093811	C	T	SNP	ZDHHC14	ENST00000359775	human	ensembl	74_37	+1	known	missense	c.1124	p.T375M	0.051	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC14	HGNC	ENSG00000175048	tier1	-	-	80	0	0.00	51	11	17.74
ZDHHC24	0	genome.wustl.edu	37	11	66311333	66311333	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	66311333	66311333	C	T	SNP	ZDHHC24	ENST00000310442	human	ensembl	74_37	-1	known	missense	c.401	p.G134D	0.689	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC24	HGNC	ENSG00000174165	tier1	-	-	75	0	0.00	125	13	9.42
ZFPM2	0	genome.wustl.edu	37	8	106815226	106815226	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	106815226	106815226	A	G	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.2916	p.I972M	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	30	0	0.00	27	5	15.62
ZNF184	0	genome.wustl.edu	37	6	27419285	27419285	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	27419285	27419285	G	C	SNP	ZNF184	ENST00000211936	human	ensembl	74_37	-1	known	missense	c.2053	p.L685V	0.880	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF184	HGNC	ENSG00000096654	tier1	-	-	133	0	0.00	89	52	36.62
ZNF276	0	genome.wustl.edu	37	16	89804288	89804288	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	89804288	89804288	C	T	SNP	ZNF276	ENST00000443381	human	ensembl	74_37	+1	known	nonsense	c.1549	p.R517*	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_AD,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF276	HGNC	ENSG00000158805	tier1	-	-	148	0	0.00	89	14	13.59
ZNF501	0	genome.wustl.edu	37	3	44775970	44775970	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	44775970	44775970	G	T	SNP	ZNF501	ENST00000396048	human	ensembl	74_37	+1	known	missense	c.57	p.K19N	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF501	HGNC	ENSG00000186446	tier1	-	-	97	0	0.00	75	15	16.67
ZNF551	0	genome.wustl.edu	37	19	58198355	58198355	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	58198355	58198355	C	A	SNP	ZNF551	ENST00000282296	human	ensembl	74_37	+1	known	missense	c.712	p.L238I	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF551	HGNC	ENSG00000204519	tier1	-	-	154	0	0.00	151	18	10.59
ZNF638	0	genome.wustl.edu	37	2	71607768	71607768	+	RNA	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	71607768	71607768	C	G	SNP	ZNF638	ENST00000486494	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF638	HGNC	ENSG00000075292	tier1	-	-	26	0	0.00	21	5	19.23
ZNF99	0	genome.wustl.edu	37	19	22952090	22952090	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	22952090	22952090	C	T	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	missense	c.103	p.A35T	0.005	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973	tier1	rs201519928	-	132	0	0.00	88	30	25.42
ZNRF3	0	genome.wustl.edu	37	22	29446820	29446820	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	22	29446820	29446820	C	T	SNP	ZNRF3	ENST00000544604	human	ensembl	74_37	+1	known	missense	c.2651	p.A884V	0.149	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF3	HGNC	ENSG00000183579	tier1	-	-	34	0	0.00	33	8	19.51
ZSCAN29	0	genome.wustl.edu	37	15	43656386	43656386	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	43656386	43656386	G	A	SNP	ZSCAN29	ENST00000396976	human	ensembl	74_37	-1	known	missense	c.1417	p.R473W	1.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN29	HGNC	ENSG00000140265	tier1	-	-	226	0	0.00	170	28	14.14
AMPD1	0	genome.wustl.edu	37	1	115220099	115220099	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	115220099	115220099	G	A	SNP	AMPD1	ENST00000520113	human	ensembl	74_37	-1	known	missense	c.1360	p.H454Y	1.000	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD1	HGNC	ENSG00000116748				106	0	0	79	7	8.13953
PTCHD2	0	genome.wustl.edu	37	1	11579855	11579855	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	11579855	11579855	C	T	SNP	PTCHD2	ENST00000294484	human	ensembl	74_37	+1	known	silent	c.2118	p.R706	0.997	pfam_Patched	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624				199	0	0	184	45	19.6507
TTF2	0	genome.wustl.edu	37	1	117626657	117626657	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	117626657	117626657	T	C	SNP	TTF2	ENST00000369466	human	ensembl	74_37	+1	known	missense	c.1921	p.S641P	0.999	pfam_SNF2_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_Znf_GRF,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	TTF2	HGNC	ENSG00000116830				157	0	0	147	14	8.69565
FLG	0	genome.wustl.edu	37	1	152286119	152286119	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	152286119	152286119	G	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.1243	p.R415W	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631				581	0	0	408	142	25.8182
CHRNB2	0	genome.wustl.edu	37	1	154544270	154544270	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	154544270	154544270	G	T	SNP	CHRNB2	ENST00000368476	human	ensembl	74_37	+1	known	missense	c.971	p.R324L	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB2	HGNC	ENSG00000160716				83	0	0	34	24	41.3793
CDK11B	0	genome.wustl.edu	37	1	1580528	1580528	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	1580528	1580528	C	T	SNP	CDK11B	ENST00000407249	human	ensembl	74_37	-1	known	missense	c.599	p.R200Q	0.944	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK11B	HGNC	ENSG00000248333				22	0	0	29	6	17.1429
CD1D	0	genome.wustl.edu	37	1	158151920	158151920	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	158151920	158151920	A	C	SNP	CD1D	ENST00000368171	human	ensembl	74_37	+1	known	missense	c.427	p.S143R	0.977	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1D	HGNC	ENSG00000158473				351	1	0.284091	314	37	10.5413
OR10T2	0	genome.wustl.edu	37	1	158368690	158368690	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	158368690	158368690	G	A	SNP	OR10T2	ENST00000334438	human	ensembl	74_37	-1	known	silent	c.567	p.A189	0.983	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10T2	HGNC	ENSG00000186306				66	0	0	60	10	14.2857
OR6N1	0	genome.wustl.edu	37	1	158736313	158736313	+	Silent	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	158736313	158736313	G	T	SNP	OR6N1	ENST00000335094	human	ensembl	74_37	-1	known	silent	c.160	p.R54	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6N1	HGNC	ENSG00000197403				94	0	0	60	27	31.0345
CADM3	0	genome.wustl.edu	37	1	159163218	159163218	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	159163218	159163218	C	T	SNP	CADM3	ENST00000368124	human	ensembl	74_37	+1	known	missense	c.490	p.P164S	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like_dom	-	no_errors	CADM3	HGNC	ENSG00000162706				90	0	0	87	7	7.44681
SELL	0	genome.wustl.edu	37	1	169672428	169672428	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	169672428	169672428	C	G	SNP	SELL	ENST00000236147	human	ensembl	74_37	-1	known	missense	c.959	p.G320A	0.992	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pirsf_L-selectin,pfscan_Sushi_SCR_CCP	pfam_C-type_lectin,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_C-type_lectin,smart_EG-like_dom,smart_Sushi_SCR_CCP,pirsf_L-selectin,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELL	HGNC	ENSG00000188404				33	0	0	52	8	13.3333
PRRX1	0	genome.wustl.edu	37	1	170688908	170688908	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	170688908	170688908	C	T	SNP	PRRX1	ENST00000239461	human	ensembl	74_37	+1	known	nonsense	c.283	p.R95*	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PRRX1	HGNC	ENSG00000116132				72	0	0	37	28	43.0769
TNR	0	genome.wustl.edu	37	1	175365679	175365679	+	Splice_Site	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	175365679	175365679	C	T	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	splice_site	c.1240+1	e3+1	1.000	-	-	-	no_errors	TNR	HGNC	ENSG00000116147				69	0	0	67	9	11.8421
PAPPA2	0	genome.wustl.edu	37	1	176564058	176564058	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	176564058	176564058	C	A	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.1318	p.H440N	0.689	superfamily_ConA-like_lec_gl_sf	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183				164	0	0	91	39	30
CFH	0	genome.wustl.edu	37	1	196643035	196643035	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	196643035	196643035	T	A	SNP	CFH	ENST00000367429	human	ensembl	74_37	+1	known	missense	c.293	p.L98H	0.241	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971				126	0	0	93	48	34.0426
CENPF	0	genome.wustl.edu	37	1	214819304	214819304	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	214819304	214819304	G	A	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	missense	c.6391	p.D2131N	1.000	pfam_Centromere_CenpF_leu-rich_rpt	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				103	0	0	97	10	9.34579
KIAA1804	0	genome.wustl.edu	37	1	233512265	233512265	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	233512265	233512265	A	G	SNP	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	missense	c.1916	p.D639G	1.000	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674				75	0	0	53	13	19.697
ADSS	0	genome.wustl.edu	37	1	244615083	244615083	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	244615083	244615083	G	A	SNP	ADSS	ENST00000366535	human	ensembl	74_37	-1	known	silent	c.37	p.L13	0.017	NULL	pfam_Adenylosuccinate_synthetase,superfamily_P-loop_NTPase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	-	no_errors	ADSS	HGNC	ENSG00000035687				21	0	0	19	4	17.3913
OR11L1	0	genome.wustl.edu	37	1	248004834	248004834	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	248004834	248004834	C	T	SNP	OR11L1	ENST00000355784	human	ensembl	74_37	-1	known	missense	c.365	p.R122H	0.996	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR11L1	HGNC	ENSG00000197591				69	0	0	50	5	9.09091
OR2L8	0	genome.wustl.edu	37	1	248112402	248112402	+	Silent	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	248112402	248112402	A	T	SNP	OR2L8	ENST00000357191	human	ensembl	74_37	+1	known	silent	c.243	p.A81	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L8	HGNC	ENSG00000196936				434	1	0.229885	250	124	33.1551
ACTRT2	0	genome.wustl.edu	37	1	2939155	2939155	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	2939155	2939155	C	T	SNP	ACTRT2	ENST00000378404	human	ensembl	74_37	+1	known	missense	c.905	p.S302L	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT2	HGNC	ENSG00000169717				178	0	0	181	55	23.3051
PRDM16	0	genome.wustl.edu	37	1	3322163	3322163	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	3322163	3322163	C	T	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	silent	c.1137	p.S379	0.066	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611				150	0	0	139	51	26.8421
HPDL	0	genome.wustl.edu	37	1	45793415	45793415	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	45793415	45793415	C	A	SNP	HPDL	ENST00000334815	human	ensembl	74_37	+1	known	missense	c.595	p.L199M	0.403	pirsf_4OHPhenylPyrv_dOase	pirsf_4OHPhenylPyrv_dOase	-	no_errors	HPDL	HGNC	ENSG00000186603				92	0	0	117	7	5.64516
C8A	0	genome.wustl.edu	37	1	57383376	57383376	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	57383376	57383376	C	T	SNP	C8A	ENST00000361249	human	ensembl	74_37	+1	known	missense	c.1742	p.T581M	0.486	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C8A	HGNC	ENSG00000157131				80	0	0	58	16	21.6216
TM2D1	0	genome.wustl.edu	37	1	62190931	62190931	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	62190931	62190931	C	T	SNP	TM2D1	ENST00000371180	human	ensembl	74_37	-1	known	silent	c.48	p.G16	0.000	NULL	pfam_TM2	-	no_errors	TM2D1	HGNC	ENSG00000162604				16	0	0	27	3	10
WDR63	0	genome.wustl.edu	37	1	85555822	85555822	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	85555822	85555822	C	T	SNP	WDR63	ENST00000294664	human	ensembl	74_37	+1	known	missense	c.764	p.T255M	0.114	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR63	HGNC	ENSG00000162643				96	0	0	80	9	10.1124
NKX2-3	0	genome.wustl.edu	37	10	101295002	101295002	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	101295002	101295002	C	T	SNP	NKX2-3	ENST00000344586	human	ensembl	74_37	+1	known	missense	c.619	p.R207W	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-3	HGNC	ENSG00000119919				33	0	0	30	9	23.0769
PKD2L1	0	genome.wustl.edu	37	10	102089753	102089753	+	Silent	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	102089753	102089753	T	C	SNP	PKD2L1	ENST00000318222	human	ensembl	74_37	-1	known	silent	c.108	p.R36	0.002	NULL	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2L1	HGNC	ENSG00000107593				214	1	0.465116	115	42	26.7516
MMP21	0	genome.wustl.edu	37	10	127462501	127462501	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	127462501	127462501	G	A	SNP	MMP21	ENST00000368808	human	ensembl	74_37	-1	known	missense	c.596	p.A199V	0.989	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,prints_Pept_M10A	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP21	HGNC	ENSG00000154485				60	0	0	50	14	21.875
ADARB2	0	genome.wustl.edu	37	10	1284314	1284314	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	1284314	1284314	T	A	SNP	ADARB2	ENST00000381312	human	ensembl	74_37	-1	known	missense	c.1241	p.K414M	1.000	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADARB2	HGNC	ENSG00000185736				19	0	0	7	9	56.25
EBF3	0	genome.wustl.edu	37	10	131636204	131636204	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	131636204	131636204	G	A	SNP	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	missense	c.1780	p.P594S	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001				65	0	0	44	10	18.5185
CUBN	0	genome.wustl.edu	37	10	16916401	16916401	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	16916401	16916401	C	T	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.9208	p.V3070I	0.166	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611				168	0	0	125	77	38.1188
SLC39A12	0	genome.wustl.edu	37	10	18250551	18250551	+	Silent	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	18250551	18250551	T	C	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	silent	c.303	p.N101	0.115	NULL	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482				122	0	0	76	59	43.7037
ARHGAP12	0	genome.wustl.edu	37	10	32132415	32132415	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	32132415	32132415	T	C	SNP	ARHGAP12	ENST00000344936	human	ensembl	74_37	-1	known	missense	c.1270	p.T424A	1.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP12	HGNC	ENSG00000165322				140	1	0.70922	104	43	29.2517
ANKRD30A	0	genome.wustl.edu	37	10	37430822	37430822	+	Nonsense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	37430822	37430822	G	T	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	nonsense	c.829	p.E277*	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513				60	0	0	65	12	15.5844
ANKRD30A	0	genome.wustl.edu	37	10	37430823	37430823	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	37430823	37430823	A	G	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.830	p.E277G	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513				61	0	0	65	12	15.5844
SLC18A3	0	genome.wustl.edu	37	10	50820023	50820023	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	50820023	50820023	C	T	SNP	SLC18A3	ENST00000374115	human	ensembl	74_37	+1	known	missense	c.1237	p.H413Y	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A3	HGNC	ENSG00000187714				68	0	0	47	11	18.9655
TMEM26	0	genome.wustl.edu	37	10	63188734	63188734	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	63188734	63188734	C	T	SNP	TMEM26	ENST00000399298	human	ensembl	74_37	-1	known	silent	c.555	p.A185	0.167	pfam_Transmembrane_26	pfam_Transmembrane_26	-	no_errors	TMEM26	HGNC	ENSG00000196932				84	0	0	61	19	23.75
PRKCQ	0	genome.wustl.edu	37	10	6521004	6521004	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	6521004	6521004	C	A	SNP	PRKCQ	ENST00000263125	human	ensembl	74_37	-1	known	missense	c.1303	p.A435S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Prot_kin_PKC_delta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKCQ	HGNC	ENSG00000065675				93	0	0	69	16	18.8235
HK1	0	genome.wustl.edu	37	10	71142292	71142292	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	71142292	71142292	G	A	SNP	HK1	ENST00000448642	human	ensembl	74_37	+1	known	missense	c.1420	p.D474N	0.999	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK1	HGNC	ENSG00000156515				109	0	0	75	16	17.5824
CDH23	0	genome.wustl.edu	37	10	73560492	73560492	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	73560492	73560492	C	T	SNP	CDH23	ENST00000398788	human	ensembl	74_37	+1	known	missense	c.742	p.R248C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736				49	0	0	54	5	8.47458
ITIH5	0	genome.wustl.edu	37	10	7608116	7608116	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	7608116	7608116	C	T	SNP	ITIH5	ENST00000256861	human	ensembl	74_37	-1	known	missense	c.2404	p.G802S	1.000	pfam_ITI_HC_C	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH5	HGNC	ENSG00000123243				66	0	0	58	24	29.2683
ATP5C1	0	genome.wustl.edu	37	10	7844266	7844266	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	7844266	7844266	A	C	SNP	ATP5C1	ENST00000356708	human	ensembl	74_37	+1	known	missense	c.671	p.D224A	1.000	pfam_ATPase_F1-cplx_gsu,superfamily_ATPase_F1_gsu_dom,tigrfam_ATPase_F1-cplx_gsu	pfam_ATPase_F1-cplx_gsu,superfamily_ATPase_F1_gsu_dom,prints_ATPase_F1-cplx_gsu,tigrfam_ATPase_F1-cplx_gsu	-	no_errors	ATP5C1	HGNC	ENSG00000165629				79	0	0	59	17	22.3684
SFTPA1	0	genome.wustl.edu	37	10	81371633	81371633	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	81371633	81371633	G	T	SNP	SFTPA1	ENST00000419470	human	ensembl	74_37	+1	known	missense	c.97	p.A33S	0.000	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	SFTPA1	HGNC	ENSG00000122852				264	0	0	170	45	20.9302
LARP4B	0	genome.wustl.edu	37	10	875402	875402	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	875402	875402	G	A	SNP	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	nonsense	c.1048	p.Q350*	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				77	0	0	77	16	17.2043
TM9SF3	0	genome.wustl.edu	37	10	98287046	98287046	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	10	98287046	98287046	C	T	SNP	TM9SF3	ENST00000371142	human	ensembl	74_37	-1	known	silent	c.1626	p.K542	1.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF3	HGNC	ENSG00000077147				47	0	0	36	11	23.4043
MMP12	0	genome.wustl.edu	37	11	102738680	102738680	+	RNA	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	102738680	102738680	C	T	SNP	MMP12	ENST00000326227	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MMP12	HGNC	ENSG00000110347				28	0	0	14	7	33.3333
FDX1	0	genome.wustl.edu	37	11	110306593	110306593	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	110306593	110306593	G	A	SNP	FDX1	ENST00000260270	human	ensembl	74_37	+1	known	missense	c.221	p.R74H	0.998	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pfscan_2Fe-2S_ferredoxin-type	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pfscan_2Fe-2S_ferredoxin-type,prints_Adrenodoxin	-	no_errors	FDX1	HGNC	ENSG00000137714				73	0	0	55	20	26.6667
HTR3B	0	genome.wustl.edu	37	11	113803163	113803163	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	113803163	113803163	A	C	SNP	HTR3B	ENST00000260191	human	ensembl	74_37	+1	known	missense	c.521	p.K174T	0.656	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_5HT3_rcpt_B,prints_5HT3_rcpt,prints_Neur_channel,prints_5HT3_rcpt_A,tigrfam_Neur_channel	-	no_errors	HTR3B	HGNC	ENSG00000149305				105	0	0	77	22	22.2222
TECTA	0	genome.wustl.edu	37	11	120996400	120996400	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	120996400	120996400	C	T	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	silent	c.1593	p.D531	0.060	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927				274	0	0	174	58	25
OR8B2	0	genome.wustl.edu	37	11	124252389	124252389	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	124252389	124252389	A	G	SNP	OR8B2	ENST00000375013	human	ensembl	74_37	-1	known	missense	c.851	p.L284P	0.489	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8B2	HGNC	ENSG00000204293				144	0	0	126	45	26.3158
VSIG2	0	genome.wustl.edu	37	11	124618613	124618613	+	Silent	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	124618613	124618613	G	C	SNP	VSIG2	ENST00000326621	human	ensembl	74_37	-1	known	silent	c.633	p.S211	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	VSIG2	HGNC	ENSG00000019102				66	0	0	52	14	21.2121
KIRREL3	0	genome.wustl.edu	37	11	126301404	126301404	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	126301404	126301404	C	T	SNP	KIRREL3	ENST00000525144	human	ensembl	74_37	-1	known	missense	c.1606	p.V536I	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL3	HGNC	ENSG00000149571				58	0	0	24	5	17.2414
MUC5B	0	genome.wustl.edu	37	11	1267665	1267665	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	1267665	1267665	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.9564	p.S3188	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				207	0	0	92	64	41.0256
MUC5B	0	genome.wustl.edu	37	11	1269786	1269786	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	1269786	1269786	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.11685	p.S3895	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				140	0	0	60	24	28.5714
KIAA1549L	0	genome.wustl.edu	37	11	33565307	33565307	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	33565307	33565307	G	C	SNP	KIAA1549L	ENST00000389726	human	ensembl	74_37	+1	known	missense	c.1307	p.S436T	0.599	NULL	NULL	-	no_errors	KIAA1549L	HGNC	ENSG00000110427				138	0	0	92	409	81.6367
MYBPC3	0	genome.wustl.edu	37	11	47372950	47372950	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	47372950	47372950	G	A	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	silent	c.132	p.R44	0.024	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571				26	0	0	22	12	35.2941
NUP160	0	genome.wustl.edu	37	11	47830054	47830054	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	47830054	47830054	G	C	SNP	NUP160	ENST00000378460	human	ensembl	74_37	-1	known	missense	c.2269	p.Q757E	1.000	NULL	pfam_Nucleoporin_Nup160	-	no_errors	NUP160	HGNC	ENSG00000030066				74	0	0	59	16	21.3333
OR4A16	0	genome.wustl.edu	37	11	55110990	55110990	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	55110990	55110990	T	G	SNP	OR4A16	ENST00000314721	human	ensembl	74_37	+1	known	missense	c.314	p.L105R	0.011	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A16	HGNC	ENSG00000181961				310	1	0.321543	209	24	10.3004
OR52B2	0	genome.wustl.edu	37	11	6190619	6190619	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	6190619	6190619	T	G	SNP	OR52B2	ENST00000530810	human	ensembl	74_37	-1	known	missense	c.938	p.K313T	0.226	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52B2	HGNC	ENSG00000255307				101	0	0	66	12	15.3846
TAF6L	0	genome.wustl.edu	37	11	62549652	62549652	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	62549652	62549652	G	A	SNP	TAF6L	ENST00000294168	human	ensembl	74_37	+1	known	missense	c.674	p.R225H	1.000	NULL	pfam_TAF_TATA-bd,pfam_DUF1546,superfamily_Histone-fold,smart_TAF_TATA-bd	-	no_errors	TAF6L	HGNC	ENSG00000162227				168	0	0	136	27	16.5644
HPX	0	genome.wustl.edu	37	11	6452560	6452560	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	6452560	6452560	C	T	SNP	HPX	ENST00000265983	human	ensembl	74_37	-1	known	missense	c.1270	p.G424S	0.000	superfamily_Hemopexin-like_dom,pirsf_Hemopexin_chordata	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Hemopexin_chordata	-	no_errors	HPX	HGNC	ENSG00000110169				178	0	0	90	43	32.3308
SF1	0	genome.wustl.edu	37	11	64535599	64535599	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	64535599	64535599	G	A	SNP	SF1	ENST00000377390	human	ensembl	74_37	-1	known	silent	c.1047	p.P349	0.039	NULL	pfam_KH_dom_type_1,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_KH_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_KH_dom_type_1	-	no_errors	SF1	HGNC	ENSG00000168066				72	0	0	53	19	26.3889
VPS51	0	genome.wustl.edu	37	11	64875340	64875340	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	64875340	64875340	G	A	SNP	VPS51	ENST00000279281	human	ensembl	74_37	+1	known	missense	c.571	p.V191M	0.963	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_RZZ-complex_Zw10,superfamily_Cullin_repeat-like_dom	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_COG_su2_N,pfam_RZZ-complex_Zw10,superfamily_Cullin_repeat-like_dom	-	no_errors	VPS51	HGNC	ENSG00000149823				10	0	0	11	4	26.6667
ZDHHC24	0	genome.wustl.edu	37	11	66311333	66311333	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	66311333	66311333	C	T	SNP	ZDHHC24	ENST00000310442	human	ensembl	74_37	-1	known	missense	c.401	p.G134D	0.689	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC24	HGNC	ENSG00000174165				70	0	0	117	10	7.87402
CORO1B	0	genome.wustl.edu	37	11	67209479	67209479	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	67209479	67209479	G	A	SNP	CORO1B	ENST00000341356	human	ensembl	74_37	-1	known	silent	c.282	p.N94	0.513	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO1B	HGNC	ENSG00000172725				82	0	0	118	19	13.8686
EPS8L2	0	genome.wustl.edu	37	11	726309	726309	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	726309	726309	A	G	SNP	EPS8L2	ENST00000318562	human	ensembl	74_37	+1	known	missense	c.1759	p.M587V	0.998	NULL	pfam_PTB,pfam_SH3_domain,pfam_PTB/PI_dom,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTB/PI_dom,smart_SH3_domain,pfscan_PTB/PI_dom,pfscan_SH3_domain	-	no_errors	EPS8L2	HGNC	ENSG00000177106				30	0	0	20	8	28.5714
C11orf30	0	genome.wustl.edu	37	11	76183702	76183702	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	76183702	76183702	C	T	SNP	C11orf30	ENST00000334736	human	ensembl	74_37	+1	known	missense	c.926	p.T309M	1.000	NULL	pfam_ENT_N,pfscan_ENT_N	-	no_errors	C11orf30	HGNC	ENSG00000158636				114	0	0	159	16	9.14286
TENM4	0	genome.wustl.edu	37	11	78380831	78380831	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	78380831	78380831	C	T	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.6559	p.A2187T	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				60	0	0	63	10	13.6986
SYTL2	0	genome.wustl.edu	37	11	85445391	85445391	+	Silent	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	85445391	85445391	C	A	SNP	SYTL2	ENST00000316356	human	ensembl	74_37	-1	known	silent	c.981	p.L327	0.053	NULL	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL2	HGNC	ENSG00000137501				197	1	0.505051	176	39	18.1395
FOLH1B	0	genome.wustl.edu	37	11	89424117	89424117	+	RNA	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	89424117	89424117	A	C	SNP	FOLH1B	ENST00000525540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.176	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612				85	0	0	101	16	13.6752
FAT3	0	genome.wustl.edu	37	11	92087232	92087232	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	92087232	92087232	A	G	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.1954	p.R652G	0.959	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				45	0	0	56	5	8.19672
FAT3	0	genome.wustl.edu	37	11	92616432	92616432	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	92616432	92616432	G	A	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.12810	p.S4270	0.001	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				216	0	0	240	52	17.8082
CCDC82	0	genome.wustl.edu	37	11	96086843	96086843	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	96086843	96086843	C	T	SNP	CCDC82	ENST00000278520	human	ensembl	74_37	-1	known	silent	c.1602	p.A534	0.967	NULL	NULL	-	no_errors	CCDC82	HGNC	ENSG00000149231				148	0	0	122	26	17.5676
CCDC82	0	genome.wustl.edu	37	11	96117157	96117157	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	96117157	96117157	C	T	SNP	CCDC82	ENST00000278520	human	ensembl	74_37	-1	known	missense	c.755	p.R252H	0.913	NULL	NULL	-	no_errors	CCDC82	HGNC	ENSG00000149231				116	0	0	110	34	23.6111
UHRF1BP1L	0	genome.wustl.edu	37	12	100452225	100452225	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	100452225	100452225	T	C	SNP	UHRF1BP1L	ENST00000279907	human	ensembl	74_37	-1	known	missense	c.2830	p.K944E	0.904	NULL	NULL	-	no_errors	UHRF1BP1L	HGNC	ENSG00000111647				66	0	0	70	5	6.66667
CLEC12A	0	genome.wustl.edu	37	12	10133223	10133223	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	10133223	10133223	A	C	SNP	CLEC12A	ENST00000355690	human	ensembl	74_37	+1	known	missense	c.452	p.K151T	0.000	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12A	HGNC	ENSG00000172322				142	0	0	105	37	26.0563
PWP1	0	genome.wustl.edu	37	12	108082531	108082531	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	108082531	108082531	G	A	SNP	PWP1	ENST00000412830	human	ensembl	74_37	+1	known	missense	c.271	p.E91K	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PWP1	HGNC	ENSG00000136045				45	0	0	48	13	21.3115
DNAH10	0	genome.wustl.edu	37	12	124352667	124352667	+	Splice_Site	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	124352667	124352667	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	splice_site	c.7165+1	e42+1	1.000	-	-	-	no_errors	DNAH10	HGNC	ENSG00000197653				35	0	0	29	4	12.1212
EP400NL	0	genome.wustl.edu	37	12	132589453	132589453	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	132589453	132589453	C	T	SNP	EP400NL	ENST00000376625	human	ensembl	74_37	+1	known	silent	c.888	p.G296	0.002	NULL	NULL	-	no_errors	EP400NL	HGNC	ENSG00000185684				16	0	0	6	4	40
PDE3A	0	genome.wustl.edu	37	12	20833196	20833196	+	Silent	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	20833196	20833196	A	G	SNP	PDE3A	ENST00000359062	human	ensembl	74_37	+1	known	silent	c.3417	p.P1139	0.009	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3A	HGNC	ENSG00000172572				94	0	0	79	5	5.95238
IFLTD1	0	genome.wustl.edu	37	12	25672806	25672806	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	25672806	25672806	T	G	SNP	IFLTD1	ENST00000458174	human	ensembl	74_37	-1	known	missense	c.1002	p.Q334H	0.000	NULL	pfam_Lamin_tail_dom	-	no_errors	IFLTD1	HGNC	ENSG00000152936				98	0	0	70	19	21.3483
TMTC1	0	genome.wustl.edu	37	12	29920871	29920871	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	29920871	29920871	G	A	SNP	TMTC1	ENST00000256062	human	ensembl	74_37	-1	known	missense	c.116	p.T39M	0.978	NULL	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687				85	0	0	82	7	7.86517
DDX11	0	genome.wustl.edu	37	12	31238023	31238023	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	31238023	31238023	G	A	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	missense	c.601	p.E201K	0.986	superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573				20	0	0	18	3	14.2857
NCKAP5L	0	genome.wustl.edu	37	12	50188845	50188845	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	50188845	50188845	C	T	SNP	NCKAP5L	ENST00000335999	human	ensembl	74_37	-1	known	missense	c.2798	p.R933H	1.000	NULL	NULL	-	no_errors	NCKAP5L	HGNC	ENSG00000167566				31	0	0	24	5	17.2414
FAIM2	0	genome.wustl.edu	37	12	50295007	50295007	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	50295007	50295007	C	T	SNP	FAIM2	ENST00000320634	human	ensembl	74_37	-1	known	silent	c.117	p.E39	1.000	NULL	pfam_Bax_inhibitor_1-related	-	no_errors	FAIM2	HGNC	ENSG00000135472				94	0	0	91	9	9
CSAD	0	genome.wustl.edu	37	12	53564266	53564266	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	53564266	53564266	C	T	SNP	CSAD	ENST00000475890	human	ensembl	74_37	-1	known	missense	c.641	p.R214K	0.997	NULL	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	CSAD	HGNC	ENSG00000139631				104	0	0	76	15	16.4835
DTX3	0	genome.wustl.edu	37	12	58002361	58002361	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	58002361	58002361	C	T	SNP	DTX3	ENST00000551632	human	ensembl	74_37	+1	known	missense	c.818	p.P273L	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DTX3	HGNC	ENSG00000178498				107	0	0	82	19	18.8119
AGAP2	0	genome.wustl.edu	37	12	58124619	58124619	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	58124619	58124619	C	T	SNP	AGAP2	ENST00000547588	human	ensembl	74_37	-1	known	missense	c.2263	p.G755R	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP2	HGNC	ENSG00000135439				45	0	0	35	7	16.6667
GRIP1	0	genome.wustl.edu	37	12	66849287	66849287	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	66849287	66849287	G	A	SNP	GRIP1	ENST00000359742	human	ensembl	74_37	-1	known	missense	c.1256	p.S419F	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRIP1	HGNC	ENSG00000155974				141	0	0	105	40	27.5862
TBC1D15	0	genome.wustl.edu	37	12	72266761	72266761	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	72266761	72266761	C	A	SNP	TBC1D15	ENST00000550746	human	ensembl	74_37	+1	known	missense	c.182	p.S61Y	1.000	pfam_DUF3548	pfam_DUF3548,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D15	HGNC	ENSG00000121749				149	0	0	149	23	13.3721
TRHDE	0	genome.wustl.edu	37	12	73046128	73046128	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	73046128	73046128	T	C	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.2567	p.V856A	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657				102	0	0	79	19	19.3878
PPFIA2	0	genome.wustl.edu	37	12	82147836	82147836	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	82147836	82147836	G	C	SNP	PPFIA2	ENST00000549396	human	ensembl	74_37	-1	known	missense	c.165	p.S55R	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220				43	0	0	39	14	26.4151
PZP	0	genome.wustl.edu	37	12	9307391	9307391	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	9307391	9307391	C	G	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	missense	c.3595	p.V1199L	0.000	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838				71	0	0	50	15	23.0769
CRADD	0	genome.wustl.edu	37	12	94243950	94243950	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	94243950	94243950	G	A	SNP	CRADD	ENST00000332896	human	ensembl	74_37	+1	known	missense	c.503	p.R168Q	1.000	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	pfam_CARD,pfam_Death_domain,superfamily_DEATH-like_dom,smart_CARD,smart_Death_domain,pfscan_CARD,pfscan_Death_domain	-	no_errors	CRADD	HGNC	ENSG00000169372				119	0	0	78	12	13.3333
PLXNC1	0	genome.wustl.edu	37	12	94654614	94654614	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	12	94654614	94654614	C	T	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	missense	c.3448	p.R1150W	0.988	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040				46	0	0	28	6	17.6471
NALCN	0	genome.wustl.edu	37	13	101795569	101795569	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	101795569	101795569	C	G	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.1980	p.E660D	0.949	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				67	0	0	40	12	23.0769
ATP4B	0	genome.wustl.edu	37	13	114309158	114309158	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	114309158	114309158	G	A	SNP	ATP4B	ENST00000335288	human	ensembl	74_37	-1	known	missense	c.212	p.P71L	0.971	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP4B	HGNC	ENSG00000186009				61	0	0	28	18	39.1304
TNFRSF19	0	genome.wustl.edu	37	13	24234513	24234513	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	24234513	24234513	G	A	SNP	TNFRSF19	ENST00000382258	human	ensembl	74_37	+1	known	missense	c.620	p.R207Q	1.000	prints_TNFR_19	smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_19	-	no_errors	TNFRSF19	HGNC	ENSG00000127863				143	0	0	111	17	13.2812
PABPC3	0	genome.wustl.edu	37	13	25670410	25670410	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	25670410	25670410	C	T	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	missense	c.74	p.A25V	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846				148	0	0	74	43	36.7521
MTUS2	0	genome.wustl.edu	37	13	29601027	29601027	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	29601027	29601027	A	C	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.2222	p.K741T	1.000	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938				57	0	0	51	9	15
PCDH17	0	genome.wustl.edu	37	13	58298857	58298857	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	58298857	58298857	G	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.2909	p.R970H	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946				78	0	0	67	11	14.1026
PCDH9	0	genome.wustl.edu	37	13	67801206	67801206	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	67801206	67801206	C	G	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	missense	c.1367	p.R456T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226				101	0	0	78	22	22
KLHL1	0	genome.wustl.edu	37	13	70413190	70413190	+	Silent	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	70413190	70413190	A	C	SNP	KLHL1	ENST00000377844	human	ensembl	74_37	-1	known	silent	c.1332	p.T444	0.998	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL1	HGNC	ENSG00000150361				126	1	0.787402	112	10	8.19672
KLF12	0	genome.wustl.edu	37	13	74387318	74387318	+	Silent	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	13	74387318	74387318	C	A	SNP	KLF12	ENST00000377666	human	ensembl	74_37	-1	known	silent	c.777	p.T259	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF12	HGNC	ENSG00000118922				96	0	0	85	8	8.60215
CDC42BPB	0	genome.wustl.edu	37	14	103430926	103430926	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	103430926	103430926	T	G	SNP	CDC42BPB	ENST00000361246	human	ensembl	74_37	-1	known	missense	c.2639	p.Q880P	1.000	pfam_Myotonic_dystrophy_kinase_coil	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	CDC42BPB	HGNC	ENSG00000198752				64	0	0	39	11	22
PSMB11	0	genome.wustl.edu	37	14	23512058	23512058	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	23512058	23512058	C	T	SNP	PSMB11	ENST00000408907	human	ensembl	74_37	+1	known	silent	c.624	p.A208	0.045	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB11	HGNC	ENSG00000222028				64	0	0	63	5	7.35294
ARHGAP5	0	genome.wustl.edu	37	14	32559900	32559900	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	32559900	32559900	C	T	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.25	p.R9C	1.000	superfamily_P-loop_NTPase	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				131	0	0	94	23	19.6581
SLC25A21	0	genome.wustl.edu	37	14	37180603	37180603	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	37180603	37180603	T	C	SNP	SLC25A21	ENST00000331299	human	ensembl	74_37	-1	known	missense	c.523	p.T175A	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A21	HGNC	ENSG00000183032				84	0	0	69	12	14.8148
FANCM	0	genome.wustl.edu	37	14	45645883	45645883	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	45645883	45645883	A	T	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.3926	p.H1309L	0.001	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790				65	0	0	66	26	28.2609
MTHFD1	0	genome.wustl.edu	37	14	64891553	64891553	+	Silent	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	64891553	64891553	G	C	SNP	MTHFD1	ENST00000216605	human	ensembl	74_37	+1	known	silent	c.759	p.V253	1.000	pfam_THF_DH/CycHdrlase_NAD-bd_dom,prints_THF_DH/CycHdrlase	pfam_Formate_THF_ligase,pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,superfamily_P-loop_NTPase,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD1	HGNC	ENSG00000100714				47	0	0	33	5	13.1579
HSPA2	0	genome.wustl.edu	37	14	65008403	65008403	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	65008403	65008403	C	T	SNP	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	missense	c.836	p.S279L	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803				60	0	0	38	4	9.52381
PCNX	0	genome.wustl.edu	37	14	71444290	71444290	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	71444290	71444290	C	A	SNP	PCNX	ENST00000304743	human	ensembl	74_37	+1	known	missense	c.1236	p.S412R	0.991	NULL	pfam_Pecanex	-	no_errors	PCNX	HGNC	ENSG00000100731				121	0	0	81	12	12.9032
ADCK1	0	genome.wustl.edu	37	14	78397959	78397959	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	78397959	78397959	C	T	SNP	ADCK1	ENST00000238561	human	ensembl	74_37	+1	known	silent	c.1305	p.N435	0.440	NULL	pfam_UbiB_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK1	HGNC	ENSG00000063761				116	0	0	97	8	7.61905
NRXN3	0	genome.wustl.edu	37	14	79454401	79454401	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	79454401	79454401	A	C	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.3146	p.N1049T	1.000	superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645				94	0	0	59	13	18.0556
BCL11B	0	genome.wustl.edu	37	14	99641568	99641568	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	99641568	99641568	C	G	SNP	BCL11B	ENST00000357195	human	ensembl	74_37	-1	known	missense	c.1605	p.E535D	0.999	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11B	HGNC	ENSG00000127152				11	0	0	15	3	16.6667
BCL11B	0	genome.wustl.edu	37	14	99697808	99697808	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	14	99697808	99697808	G	A	SNP	BCL11B	ENST00000357195	human	ensembl	74_37	-1	known	missense	c.514	p.R172C	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11B	HGNC	ENSG00000127152				23	0	0	13	5	27.7778
LRRK1	0	genome.wustl.edu	37	15	101589894	101589894	+	Silent	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	101589894	101589894	A	G	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	silent	c.3345	p.G1115	0.453	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237				94	0	0	79	14	15.0538
GOLGA6L2	0	genome.wustl.edu	37	15	23689096	23689096	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	23689096	23689096	T	G	SNP	GOLGA6L2	ENST00000312015	human	ensembl	74_37	-1	known	missense	c.419	p.N140T	0.000	NULL	prints_Tropomyosin	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450				9	0	0	12	3	20
TJP1	0	genome.wustl.edu	37	15	30010507	30010507	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	30010507	30010507	T	G	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	missense	c.3839	p.E1280A	1.000	NULL	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067				106	0	0	70	10	12.5
ZSCAN29	0	genome.wustl.edu	37	15	43656386	43656386	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	43656386	43656386	G	A	SNP	ZSCAN29	ENST00000396976	human	ensembl	74_37	-1	known	missense	c.1417	p.R473W	1.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN29	HGNC	ENSG00000140265				200	0	0	147	24	14.0351
TP53BP1	0	genome.wustl.edu	37	15	43707879	43707879	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	43707879	43707879	C	T	SNP	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	missense	c.5002	p.V1668I	0.180	smart_BRCT_dom	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369				231	0	0	125	45	26.4706
CATSPER2	0	genome.wustl.edu	37	15	43932664	43932664	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	43932664	43932664	C	T	SNP	CATSPER2	ENST00000321596	human	ensembl	74_37	-1	known	nonsense	c.419	p.W140*	0.255	NULL	pfam_Ion_trans_dom	-	no_errors	CATSPER2	HGNC	ENSG00000166762				150	0	0	109	11	9.16667
SEMA6D	0	genome.wustl.edu	37	15	48056479	48056479	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	48056479	48056479	C	T	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	silent	c.1074	p.P358	0.432	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872				118	1	0.840336	68	22	24.4444
SLC24A5	0	genome.wustl.edu	37	15	48429130	48429130	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	48429130	48429130	A	G	SNP	SLC24A5	ENST00000341459	human	ensembl	74_37	+1	known	missense	c.841	p.S281G	1.000	tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A5	HGNC	ENSG00000188467				135	0	0	92	20	17.8571
CEP152	0	genome.wustl.edu	37	15	49090149	49090149	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	49090149	49090149	C	T	SNP	CEP152	ENST00000380950	human	ensembl	74_37	-1	known	missense	c.187	p.G63R	0.000	NULL	NULL	-	no_errors	CEP152	HGNC	ENSG00000103995				38	0	0	27	5	15.625
WDR72	0	genome.wustl.edu	37	15	53815467	53815467	+	Silent	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	53815467	53815467	T	C	SNP	WDR72	ENST00000360509	human	ensembl	74_37	-1	known	silent	c.3201	p.Q1067	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415				250	0	0	213	29	11.9835
BNIP2	0	genome.wustl.edu	37	15	59970273	59970273	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	59970273	59970273	T	G	SNP	BNIP2	ENST00000267859	human	ensembl	74_37	-1	known	missense	c.672	p.K224N	1.000	pfam_Bcl2-/adenovirus-E1B	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	BNIP2	HGNC	ENSG00000140299				42	0	0	39	7	15.2174
HERC1	0	genome.wustl.edu	37	15	63935637	63935637	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	63935637	63935637	C	A	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	missense	c.11297	p.G3766V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657				32	0	0	21	11	34.375
MYO9A	0	genome.wustl.edu	37	15	72338409	72338409	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	72338409	72338409	G	A	SNP	MYO9A	ENST00000424560	human	ensembl	74_37	-1	known	silent	c.496	p.L166	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9A	HGNC	ENSG00000066933				116	1	0.854701	88	33	27.2727
SCAMP5	0	genome.wustl.edu	37	15	75308941	75308941	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	75308941	75308941	C	T	SNP	SCAMP5	ENST00000562212	human	ensembl	74_37	+1	known	silent	c.144	p.S48	1.000	pfam_SCAMP	pfam_SCAMP	-	no_errors	SCAMP5	HGNC	ENSG00000198794				100	0	0	82	12	12.766
FSD2	0	genome.wustl.edu	37	15	83455853	83455853	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	83455853	83455853	C	A	SNP	FSD2	ENST00000334574	human	ensembl	74_37	-1	known	missense	c.290	p.R97I	0.000	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,prints_Butyrophylin	-	no_errors	FSD2	HGNC	ENSG00000186628				156	0	0	140	14	9.09091
BNC1	0	genome.wustl.edu	37	15	83935597	83935597	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	15	83935597	83935597	G	A	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	silent	c.426	p.Y142	0.046	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594				161	0	0	122	21	14.6853
CACNA1H	0	genome.wustl.edu	37	16	1261575	1261575	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	1261575	1261575	G	A	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	missense	c.4445	p.R1482Q	0.995	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557				39	0	0	24	9	27.2727
TSC2	0	genome.wustl.edu	37	16	2106756	2106756	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	2106756	2106756	G	A	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.760	p.E254K	1.000	pfam_Tuberin_N,superfamily_ARM-type_fold	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197				188	0	0	116	42	26.5823
ITGAM	0	genome.wustl.edu	37	16	31283265	31283265	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	31283265	31283265	C	T	SNP	ITGAM	ENST00000544665	human	ensembl	74_37	+1	known	missense	c.656	p.T219M	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896				112	0	0	81	11	11.9565
NLRC3	0	genome.wustl.edu	37	16	3592702	3592702	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	3592702	3592702	G	A	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.3151	p.R1051W	0.996	smart_Leu-rich_rpt_RNase_inh_sub-typ	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984				18	0	0	9	7	43.75
ABCC11	0	genome.wustl.edu	37	16	48234312	48234312	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	48234312	48234312	G	A	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	nonsense	c.1957	p.Q653*	0.832	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270				94	0	0	76	4	5
CDH8	0	genome.wustl.edu	37	16	61935343	61935343	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	61935343	61935343	A	G	SNP	CDH8	ENST00000577390	human	ensembl	74_37	-1	known	missense	c.287	p.I96T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH8	HGNC	ENSG00000150394				80	0	0	74	10	11.9048
PHLPP2	0	genome.wustl.edu	37	16	71736549	71736549	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	71736549	71736549	C	A	SNP	PHLPP2	ENST00000356272	human	ensembl	74_37	-1	known	nonsense	c.370	p.E124*	1.000	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom	-	no_errors	PHLPP2	HGNC	ENSG00000040199				134	0	0	79	22	21.7822
ZNF276	0	genome.wustl.edu	37	16	89804288	89804288	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	16	89804288	89804288	C	T	SNP	ZNF276	ENST00000443381	human	ensembl	74_37	+1	known	nonsense	c.1549	p.R517*	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_AD,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF276	HGNC	ENSG00000158805				130	0	0	80	13	13.9785
MYO1C	0	genome.wustl.edu	37	17	1371342	1371342	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	1371342	1371342	C	T	SNP	MYO1C	ENST00000359786	human	ensembl	74_37	-1	known	missense	c.2836	p.A946T	0.176	pfam_Myosin_tail_2	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1C	HGNC	ENSG00000197879				114	1	0.869565	47	31	39.7436
SCARF1	0	genome.wustl.edu	37	17	1538829	1538829	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	1538829	1538829	C	T	SNP	SCARF1	ENST00000571272	human	ensembl	74_37	-1	known	missense	c.1679	p.R560H	0.547	NULL	pfam_EGF_laminin,pfam_EGF_extracell,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	SCARF1	HGNC	ENSG00000074660				134	0	0	98	14	12.5
CCDC144A	0	genome.wustl.edu	37	17	16593937	16593937	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	16593937	16593937	G	A	SNP	CCDC144A	ENST00000360524	human	ensembl	74_37	+1	known	missense	c.223	p.D75N	0.002	NULL	pfam_DUF3496	-	no_errors	CCDC144A	HGNC	ENSG00000170160				241	0	0	127	103	44.7826
TRPV3	0	genome.wustl.edu	37	17	3436156	3436156	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	3436156	3436156	G	A	SNP	TRPV3	ENST00000301365	human	ensembl	74_37	-1	known	missense	c.860	p.T287M	0.998	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	-	no_errors	TRPV3	HGNC	ENSG00000167723				82	0	0	32	25	43.8596
GPR179	0	genome.wustl.edu	37	17	36483371	36483371	+	Silent	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	36483371	36483371	G	T	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	silent	c.6081	p.I2027	0.000	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888				147	0	0	72	56	43.75
MLLT6	0	genome.wustl.edu	37	17	36881037	36881037	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	36881037	36881037	G	A	SNP	MLLT6	ENST00000325718	human	ensembl	74_37	+1	known	silent	c.3048	p.A1016	0.740	NULL	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT6	HGNC	ENSG00000108292				21	0	0	18	5	21.7391
ITGA2B	0	genome.wustl.edu	37	17	42457115	42457115	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	42457115	42457115	G	A	SNP	ITGA2B	ENST00000262407	human	ensembl	74_37	-1	known	missense	c.1820	p.T607M	0.031	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA2B	HGNC	ENSG00000005961				189	0	0	95	57	37.5
TANC2	0	genome.wustl.edu	37	17	61497971	61497971	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	61497971	61497971	G	A	SNP	TANC2	ENST00000424789	human	ensembl	74_37	+1	known	missense	c.4628	p.R1543Q	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC2	HGNC	ENSG00000170921				50	0	0	21	23	52.2727
GPR142	0	genome.wustl.edu	37	17	72368351	72368351	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	72368351	72368351	C	T	SNP	GPR142	ENST00000335666	human	ensembl	74_37	+1	known	missense	c.1001	p.S334L	0.972	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR142	HGNC	ENSG00000257008				75	0	0	25	20	44.4444
CCDC42	0	genome.wustl.edu	37	17	8644967	8644967	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	17	8644967	8644967	C	T	SNP	CCDC42	ENST00000293845	human	ensembl	74_37	-1	known	missense	c.317	p.R106H	0.980	NULL	NULL	-	no_errors	CCDC42	HGNC	ENSG00000161973				63	0	0	39	18	31.5789
NPC1	0	genome.wustl.edu	37	18	21136494	21136494	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	18	21136494	21136494	C	T	SNP	NPC1	ENST00000269228	human	ensembl	74_37	-1	known	missense	c.1039	p.V347I	1.000	tigrfam_NP_C_type	pfam_Patched,pfam_MMPL_dom,pfscan_SSD,tigrfam_NP_C_type	-	no_errors	NPC1	HGNC	ENSG00000141458				75	0	0	90	7	7.21649
DCC	0	genome.wustl.edu	37	18	50976977	50976977	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	18	50976977	50976977	G	C	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	missense	c.3337	p.V1113L	1.000	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323				88	0	0	37	12	24.4898
DCC	0	genome.wustl.edu	37	18	51013195	51013195	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	18	51013195	51013195	G	A	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	silent	c.3765	p.T1255	0.935	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323				135	0	0	99	28	22.0472
SLC44A2	0	genome.wustl.edu	37	19	10747210	10747210	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	10747210	10747210	C	T	SNP	SLC44A2	ENST00000335757	human	ensembl	74_37	+1	known	missense	c.1445	p.P482L	1.000	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A2	HGNC	ENSG00000129353				111	0	0	69	25	26.5957
SLC5A5	0	genome.wustl.edu	37	19	18001748	18001748	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	18001748	18001748	C	T	SNP	SLC5A5	ENST00000222248	human	ensembl	74_37	+1	known	missense	c.1705	p.R569W	0.003	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A5	HGNC	ENSG00000105641				219	0	0	119	59	33.1461
ELL	0	genome.wustl.edu	37	19	18561591	18561591	+	Silent	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	18561591	18561591	C	A	SNP	ELL	ENST00000262809	human	ensembl	74_37	-1	known	silent	c.1161	p.R387	0.004	NULL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL	HGNC	ENSG00000105656				26	0	0	8	4	33.3333
ZNF99	0	genome.wustl.edu	37	19	22952090	22952090	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	22952090	22952090	C	T	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	missense	c.103	p.A35T	0.005	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973				124	0	0	84	24	22.2222
GAPDHS	0	genome.wustl.edu	37	19	36029512	36029512	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	36029512	36029512	C	T	SNP	GAPDHS	ENST00000222286	human	ensembl	74_37	+1	known	nonsense	c.376	p.R126*	0.949	pirsf_GlycerAld/Erythrose_P_DH,pfam_GlycerAld_3-P_DH_NAD(P)-bd,smart_GlycerAld_3-P_DH_NAD(P)-bd,tigrfam_Glyceraldehyde-3-P_DH_1	pirsf_GlycerAld/Erythrose_P_DH,pfam_GlycerAld_3-P_DH_cat,pfam_GlycerAld_3-P_DH_NAD(P)-bd,smart_GlycerAld_3-P_DH_NAD(P)-bd,prints_GlycerAld/Erythrose_P_DH,tigrfam_Glyceraldehyde-3-P_DH_1	-	no_errors	GAPDHS	HGNC	ENSG00000105679				58	0	0	40	3	6.97674
RASGRP4	0	genome.wustl.edu	37	19	38905604	38905604	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	38905604	38905604	C	T	SNP	RASGRP4	ENST00000587738	human	ensembl	74_37	-1	known	missense	c.1114	p.G372S	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_DAG/PE-bd	-	no_errors	RASGRP4	HGNC	ENSG00000171777				40	0	0	23	8	25.8065
MAP4K1	0	genome.wustl.edu	37	19	39088187	39088187	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	39088187	39088187	G	A	SNP	MAP4K1	ENST00000591517	human	ensembl	74_37	-1	known	missense	c.1717	p.R573W	0.996	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP4K1	HGNC	ENSG00000104814				107	0	0	75	35	31.8182
RELB	0	genome.wustl.edu	37	19	45515504	45515504	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	45515504	45515504	C	T	SNP	RELB	ENST00000221452	human	ensembl	74_37	+1	known	silent	c.474	p.T158	0.269	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELB	HGNC	ENSG00000104856				22	0	0	23	3	11.5385
PPFIA3	0	genome.wustl.edu	37	19	49633794	49633794	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	49633794	49633794	G	A	SNP	PPFIA3	ENST00000334186	human	ensembl	74_37	+1	known	missense	c.817	p.A273T	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA3	HGNC	ENSG00000177380				17	0	0	12	3	20
PTPRS	0	genome.wustl.edu	37	19	5223252	5223252	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	5223252	5223252	G	A	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	missense	c.2554	p.R852C	0.954	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426				9	0	0	11	4	26.6667
ZNF320	0	genome.wustl.edu	37	19	53384561	53384561	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	53384561	53384561	T	C	SNP	ZNF320	ENST00000391781	human	ensembl	74_37	-1	known	missense	c.818	p.Y273C	0.278	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF320	HGNC	ENSG00000182986				187	1	0.531915	147	18	10.9091
GP6	0	genome.wustl.edu	37	19	55549586	55549586	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	55549586	55549586	C	T	SNP	GP6	ENST00000310373	human	ensembl	74_37	-1	known	missense	c.19	p.A7T	0.000	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	GP6	HGNC	ENSG00000088053				11	0	0	14	5	26.3158
PEG3	0	genome.wustl.edu	37	19	57326025	57326025	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	57326025	57326025	G	T	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.3785	p.A1262D	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300				74	0	0	49	11	18.3333
PEG3	0	genome.wustl.edu	37	19	57327776	57327776	+	Silent	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	57327776	57327776	A	G	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	silent	c.2034	p.T678	0.240	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300				190	0	0	150	17	10.1796
ZNF551	0	genome.wustl.edu	37	19	58198355	58198355	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	19	58198355	58198355	C	A	SNP	ZNF551	ENST00000282296	human	ensembl	74_37	+1	known	missense	c.712	p.L238I	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF551	HGNC	ENSG00000204519				138	0	0	136	16	10.5263
ZC3H8	0	genome.wustl.edu	37	2	113012503	113012503	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	113012503	113012503	G	A	SNP	ZC3H8	ENST00000272570	human	ensembl	74_37	-1	known	missense	c.56	p.A19V	0.015	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H8	HGNC	ENSG00000144161				36	0	0	34	19	35.8491
SAP130	0	genome.wustl.edu	37	2	128712790	128712790	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	128712790	128712790	G	A	SNP	SAP130	ENST00000357702	human	ensembl	74_37	-1	known	missense	c.2270	p.P757L	0.993	NULL	NULL	-	no_errors	SAP130	HGNC	ENSG00000136715				157	0	0	95	17	15.1786
NEB	0	genome.wustl.edu	37	2	152534502	152534502	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	152534502	152534502	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.3455	p.A1152V	1.000	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				64	0	0	55	5	8.33333
BAZ2B	0	genome.wustl.edu	37	2	160289338	160289338	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	160289338	160289338	A	C	SNP	BAZ2B	ENST00000392783	human	ensembl	74_37	-1	known	missense	c.1830	p.D610E	1.000	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2B	HGNC	ENSG00000123636				90	0	0	59	10	14.4928
SCN7A	0	genome.wustl.edu	37	2	167301492	167301492	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	167301492	167301492	T	G	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	missense	c.1406	p.K469T	0.023	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546				32	0	0	26	8	23.5294
TTN	0	genome.wustl.edu	37	2	179399663	179399663	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	179399663	179399663	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.93975	p.E31325	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				66	0	0	34	28	45.1613
TTN	0	genome.wustl.edu	37	2	179409019	179409019	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	179409019	179409019	C	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.88233	p.Q29411H	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				83	0	0	43	24	35.8209
TTN	0	genome.wustl.edu	37	2	179482952	179482952	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	179482952	179482952	C	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.39529	p.E13177Q	1.000	superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				182	0	0	161	28	14.8148
TYW5	0	genome.wustl.edu	37	2	200797906	200797906	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	200797906	200797906	T	G	SNP	TYW5	ENST00000354611	human	ensembl	74_37	-1	known	missense	c.832	p.I278L	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	TYW5	HGNC	ENSG00000162971				175	0	0	223	24	9.7166
ADAM23	0	genome.wustl.edu	37	2	207424843	207424843	+	Splice_Site	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	207424843	207424843	G	A	SNP	ADAM23	ENST00000264377	human	ensembl	74_37	+1	known	splice_site	c.1169+1	e11+1	1.000	-	-	-	no_errors	ADAM23	HGNC	ENSG00000114948				48	0	0	47	15	24.1935
ADAM23	0	genome.wustl.edu	37	2	207460850	207460850	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	207460850	207460850	A	G	SNP	ADAM23	ENST00000264377	human	ensembl	74_37	+1	known	missense	c.2323	p.R775G	0.989	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM23	HGNC	ENSG00000114948				56	0	0	52	7	11.8644
CRYGA	0	genome.wustl.edu	37	2	209028005	209028005	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	209028005	209028005	G	A	SNP	CRYGA	ENST00000304502	human	ensembl	74_37	-1	known	missense	c.175	p.R59C	0.370	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGA	HGNC	ENSG00000168582				87	0	0	159	17	9.65909
FN1	0	genome.wustl.edu	37	2	216243984	216243984	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	216243984	216243984	C	T	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.5491	p.A1831T	0.181	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				103	1	0.961538	89	15	14.4231
SPEG	0	genome.wustl.edu	37	2	220309612	220309612	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	220309612	220309612	G	A	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	missense	c.544	p.E182K	0.998	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195				170	0	0	110	31	21.9858
SP110	0	genome.wustl.edu	37	2	231077540	231077540	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	231077540	231077540	C	T	SNP	SP110	ENST00000258381	human	ensembl	74_37	-1	known	silent	c.519	p.S173	0.000	NULL	pfam_Sp100,pfam_SAND_dom,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP110	HGNC	ENSG00000135899				219	0	0	146	54	27
ANKMY1	0	genome.wustl.edu	37	2	241494402	241494402	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	241494402	241494402	C	A	SNP	ANKMY1	ENST00000361678	human	ensembl	74_37	-1	known	nonsense	c.217	p.E73*	0.038	NULL	pfam_MORN,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_MORN,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY1	HGNC	ENSG00000144504				273	0	0	173	66	27.6151
XDH	0	genome.wustl.edu	37	2	31625932	31625932	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	31625932	31625932	C	T	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	missense	c.179	p.R60H	0.000	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125				159	0	0	102	16	13.5593
CTNNA2	0	genome.wustl.edu	37	2	80085199	80085199	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	80085199	80085199	G	A	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.461	p.R154H	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				163	0	0	130	13	9.09091
LRRTM1	0	genome.wustl.edu	37	2	80530256	80530256	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	80530256	80530256	G	A	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	missense	c.689	p.P230L	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951				208	0	0	133	19	12.5
ASAP2	0	genome.wustl.edu	37	2	9515045	9515045	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	9515045	9515045	C	T	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	missense	c.1718	p.T573M	0.993	superfamily_Ankyrin_rpt-contain_dom	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP2	HGNC	ENSG00000151693				119	0	0	93	16	14.6789
PDYN	0	genome.wustl.edu	37	20	1961099	1961099	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	1961099	1961099	C	T	SNP	PDYN	ENST00000217305	human	ensembl	74_37	-1	known	missense	c.635	p.R212Q	1.000	prints_Proenkphlin_B	pfam_Opioid_neupept,prints_Proenkphlin_B,prints_Opioid_neupept	-	no_errors	PDYN	HGNC	ENSG00000101327				236	0	0	219	47	17.6692
C20orf26	0	genome.wustl.edu	37	20	20278996	20278996	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	20278996	20278996	C	T	SNP	C20orf26	ENST00000245957	human	ensembl	74_37	+1	known	missense	c.3388	p.R1130W	0.998	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101				50	0	0	27	31	53.4483
TRPC4AP	0	genome.wustl.edu	37	20	33637793	33637793	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	33637793	33637793	T	C	SNP	TRPC4AP	ENST00000252015	human	ensembl	74_37	-1	known	missense	c.533	p.E178G	1.000	NULL	pfam_DUF3689	-	no_errors	TRPC4AP	HGNC	ENSG00000100991				85	0	0	110	33	23.0769
SOGA1	0	genome.wustl.edu	37	20	35444681	35444681	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	35444681	35444681	C	A	SNP	SOGA1	ENST00000237536	human	ensembl	74_37	-1	known	missense	c.1164	p.L388F	1.000	pfam_SOGA	pfam_SOGA	-	no_errors	SOGA1	HGNC	ENSG00000149639				109	0	0	82	67	44.9664
IFT52	0	genome.wustl.edu	37	20	42264652	42264652	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	42264652	42264652	C	T	SNP	IFT52	ENST00000373030	human	ensembl	74_37	+1	known	missense	c.1010	p.A337V	1.000	NULL	pfam_ABC_transp_unknown	-	no_errors	IFT52	HGNC	ENSG00000101052				72	0	0	61	44	41.9048
KCNG1	0	genome.wustl.edu	37	20	49626318	49626318	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	49626318	49626318	G	A	SNP	KCNG1	ENST00000371571	human	ensembl	74_37	-1	known	silent	c.558	p.D186	0.726	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG1	HGNC	ENSG00000026559				98	0	0	131	11	7.74648
NFATC2	0	genome.wustl.edu	37	20	50140551	50140551	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	50140551	50140551	T	C	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.229	p.S77G	1.000	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096				150	0	0	143	42	22.7027
TSHZ2	0	genome.wustl.edu	37	20	51872386	51872386	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	51872386	51872386	G	A	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	missense	c.2389	p.D797N	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463				177	0	0	199	42	17.4274
GMEB2	0	genome.wustl.edu	37	20	62223462	62223462	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	62223462	62223462	C	T	SNP	GMEB2	ENST00000266068	human	ensembl	74_37	-1	known	missense	c.865	p.G289S	1.000	superfamily_Sig_transdc_His_kin_Hpt_dom	pfam_SAND_dom,superfamily_SAND_dom-like,superfamily_Sig_transdc_His_kin_Hpt_dom,smart_SAND_dom,pfscan_SAND_dom	-	no_errors	GMEB2	HGNC	ENSG00000101216				127	0	0	170	10	5.55556
ABHD16B	0	genome.wustl.edu	37	20	62493575	62493575	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	62493575	62493575	G	A	SNP	ABHD16B	ENST00000369916	human	ensembl	74_37	+1	known	missense	c.682	p.E228K	0.997	pfam_AB_hydrolase_1	pfam_AB_hydrolase_1	-	no_errors	ABHD16B	HGNC	ENSG00000183260				39	0	0	38	26	40.625
UCKL1	0	genome.wustl.edu	37	20	62571777	62571777	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	20	62571777	62571777	G	T	SNP	UCKL1	ENST00000354216	human	ensembl	74_37	-1	known	missense	c.1364	p.T455N	1.000	NULL	pfam_PRK/URK,pfam_CPT,superfamily_P-loop_NTPase,prints_Uridine_kinase,prints_PRK,tigrfam_Uridine_kinase	-	no_errors	UCKL1	HGNC	ENSG00000198276				51	0	0	61	5	7.57576
ZNRF3	0	genome.wustl.edu	37	22	29446820	29446820	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	22	29446820	29446820	C	T	SNP	ZNRF3	ENST00000544604	human	ensembl	74_37	+1	known	missense	c.2651	p.A884V	0.149	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF3	HGNC	ENSG00000183579				32	0	0	28	7	20
ACR	0	genome.wustl.edu	37	22	51178361	51178361	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	22	51178361	51178361	C	T	SNP	ACR	ENST00000216139	human	ensembl	74_37	+1	known	missense	c.521	p.S174F	0.059	pirsf_Pept_S1A_acrosin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_acrosin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	ACR	HGNC	ENSG00000100312				143	0	0	98	21	17.6471
PPP2R3A	0	genome.wustl.edu	37	3	135721796	135721796	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	135721796	135721796	A	G	SNP	PPP2R3A	ENST00000264977	human	ensembl	74_37	+1	known	missense	c.1456	p.K486E	0.003	NULL	pfscan_EF_hand_dom	-	no_errors	PPP2R3A	HGNC	ENSG00000073711				92	0	0	103	14	11.9658
CNTN6	0	genome.wustl.edu	37	3	1425012	1425012	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	1425012	1425012	A	T	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.2437	p.S813C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115				282	0	0	138	80	36.6972
IGSF10	0	genome.wustl.edu	37	3	151165455	151165455	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	151165455	151165455	G	A	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	nonsense	c.2314	p.R772*	0.001	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				103	0	0	56	42	42.8571
FNDC3B	0	genome.wustl.edu	37	3	172061938	172061938	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	172061938	172061938	G	A	SNP	FNDC3B	ENST00000336824	human	ensembl	74_37	+1	known	missense	c.2140	p.E714K	0.918	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3B	HGNC	ENSG00000075420				207	0	0	175	20	10.2564
ABCF3	0	genome.wustl.edu	37	3	183906155	183906155	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	183906155	183906155	C	T	SNP	ABCF3	ENST00000429586	human	ensembl	74_37	+1	known	missense	c.796	p.R266W	0.386	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF3	HGNC	ENSG00000161204				201	0	0	157	46	22.6601
ST6GAL1	0	genome.wustl.edu	37	3	186761057	186761057	+	Nonsense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	186761057	186761057	C	G	SNP	ST6GAL1	ENST00000169298	human	ensembl	74_37	+1	known	nonsense	c.566	p.S189*	0.984	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST6GAL1	HGNC	ENSG00000073849				215	0	0	184	39	17.4888
AZI2	0	genome.wustl.edu	37	3	28368376	28368376	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	28368376	28368376	T	A	SNP	AZI2	ENST00000479665	human	ensembl	74_37	-1	known	missense	c.713	p.Q238L	1.000	NULL	NULL	-	no_errors	AZI2	HGNC	ENSG00000163512				126	0	0	88	10	10.2041
MYRIP	0	genome.wustl.edu	37	3	40231684	40231684	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	40231684	40231684	A	C	SNP	MYRIP	ENST00000302541	human	ensembl	74_37	+1	known	missense	c.1395	p.E465D	0.076	pfam_Myrip/Melanophilin	pfam_Myrip/Melanophilin,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	MYRIP	HGNC	ENSG00000170011				109	1	0.909091	63	45	41.6667
CHL1	0	genome.wustl.edu	37	3	443365	443365	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	443365	443365	A	C	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.3442	p.T1148P	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121				76	0	0	47	9	16.0714
ZNF501	0	genome.wustl.edu	37	3	44775970	44775970	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	44775970	44775970	G	T	SNP	ZNF501	ENST00000396048	human	ensembl	74_37	+1	known	missense	c.57	p.K19N	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF501	HGNC	ENSG00000186446				89	0	0	69	12	14.8148
HYAL2	0	genome.wustl.edu	37	3	50355686	50355686	+	Silent	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	50355686	50355686	G	C	SNP	HYAL2	ENST00000357750	human	ensembl	74_37	-1	known	silent	c.1296	p.G432	1.000	pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL2	HGNC	ENSG00000068001				94	0	0	64	9	12.3288
HYAL2	0	genome.wustl.edu	37	3	50357644	50357644	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	50357644	50357644	C	T	SNP	HYAL2	ENST00000357750	human	ensembl	74_37	-1	known	missense	c.277	p.G93R	0.000	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL2	HGNC	ENSG00000068001				109	0	0	42	39	48.1481
NISCH	0	genome.wustl.edu	37	3	52526263	52526263	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	52526263	52526263	C	T	SNP	NISCH	ENST00000345716	human	ensembl	74_37	+1	known	missense	c.4280	p.P1427L	1.000	NULL	pfam_Phox,pfam_Leu-rich_rpt,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	NISCH	HGNC	ENSG00000010322				314	0	0	186	66	26.1905
MAGI1	0	genome.wustl.edu	37	3	65464281	65464281	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	65464281	65464281	T	C	SNP	MAGI1	ENST00000402939	human	ensembl	74_37	-1	known	missense	c.743	p.N248S	1.000	smart_GK/Ca_channel_bsu	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI1	HGNC	ENSG00000151276				159	0	0	86	56	39.4366
PROS1	0	genome.wustl.edu	37	3	93595984	93595984	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	93595984	93595984	T	C	SNP	PROS1	ENST00000394236	human	ensembl	74_37	-1	known	missense	c.1696	p.S566G	0.005	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	PROS1	HGNC	ENSG00000184500				67	0	0	46	47	50.5376
EPHA6	0	genome.wustl.edu	37	3	96706401	96706401	+	Silent	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	3	96706401	96706401	A	C	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	silent	c.678	p.S226	0.892	pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224				264	0	0	161	102	38.7833
FGFRL1	0	genome.wustl.edu	37	4	1017851	1017851	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	1017851	1017851	C	T	SNP	FGFRL1	ENST00000264748	human	ensembl	74_37	+1	known	missense	c.680	p.A227V	0.209	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FGFRL1	HGNC	ENSG00000127418				25	0	0	15	7	31.8182
SPON2	0	genome.wustl.edu	37	4	1164265	1164265	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	1164265	1164265	G	C	SNP	SPON2	ENST00000290902	human	ensembl	74_37	-1	known	missense	c.736	p.Q246E	0.047	NULL	pfam_Spondin_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Spondin_N,pfscan_Thrombospondin_1_rpt	-	no_errors	SPON2	HGNC	ENSG00000159674				168	0	0	121	41	25.3086
NDST3	0	genome.wustl.edu	37	4	119035974	119035974	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	119035974	119035974	A	C	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.1083	p.E361D	1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100				92	0	0	53	8	13.1148
USP53	0	genome.wustl.edu	37	4	120213587	120213587	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	120213587	120213587	G	C	SNP	USP53	ENST00000274030	human	ensembl	74_37	+1	known	missense	c.2443	p.D815H	0.009	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP53	HGNC	ENSG00000145390				96	0	0	47	5	9.61538
TNIP3	0	genome.wustl.edu	37	4	122075740	122075740	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	122075740	122075740	T	G	SNP	TNIP3	ENST00000057513	human	ensembl	74_37	-1	known	missense	c.458	p.E153A	0.996	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730				118	0	0	76	18	19.1489
QRFPR	0	genome.wustl.edu	37	4	122301574	122301574	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	122301574	122301574	G	A	SNP	QRFPR	ENST00000394427	human	ensembl	74_37	-1	known	missense	c.229	p.R77C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	QRFPR	HGNC	ENSG00000186867				121	0	0	72	21	22.5806
SMAD1	0	genome.wustl.edu	37	4	146468031	146468031	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	146468031	146468031	A	G	SNP	SMAD1	ENST00000302085	human	ensembl	74_37	+1	known	missense	c.952	p.N318D	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD1	HGNC	ENSG00000170365				110	0	0	96	8	7.69231
TKTL2	0	genome.wustl.edu	37	4	164394749	164394749	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	164394749	164394749	C	T	SNP	TKTL2	ENST00000280605	human	ensembl	74_37	-1	known	silent	c.138	p.A46	0.133	pfam_Transketolase_N	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKTL2	HGNC	ENSG00000151005				59	0	0	36	8	18.1818
CABS1	0	genome.wustl.edu	37	4	71200811	71200811	+	Nonsense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	71200811	71200811	A	T	SNP	CABS1	ENST00000273936	human	ensembl	74_37	+1	known	nonsense	c.55	p.K19*	0.002	NULL	NULL	-	no_errors	CABS1	HGNC	ENSG00000145309				96	0	0	60	13	17.8082
MUC7	0	genome.wustl.edu	37	4	71347381	71347381	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	71347381	71347381	C	G	SNP	MUC7	ENST00000304887	human	ensembl	74_37	+1	known	missense	c.920	p.P307R	0.109	NULL	NULL	-	no_errors	MUC7	HGNC	ENSG00000171195				313	0	0	179	18	9.13706
PF4	0	genome.wustl.edu	37	4	74846961	74846961	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	74846961	74846961	G	A	SNP	PF4	ENST00000296029	human	ensembl	74_37	-1	known	missense	c.266	p.P89L	0.001	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	PF4	HGNC	ENSG00000163737				81	0	0	49	15	23.4375
SORCS2	0	genome.wustl.edu	37	4	7728538	7728538	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	7728538	7728538	C	T	SNP	SORCS2	ENST00000507866	human	ensembl	74_37	+1	known	missense	c.2777	p.T926M	0.876	superfamily_PKD_dom	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	SORCS2	HGNC	ENSG00000184985				163	0	0	69	32	31.6832
FRAS1	0	genome.wustl.edu	37	4	79229294	79229294	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	79229294	79229294	G	A	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	missense	c.1609	p.V537M	0.954	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759				42	0	0	28	7	20
ABLIM2	0	genome.wustl.edu	37	4	8098895	8098895	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	8098895	8098895	A	C	SNP	ABLIM2	ENST00000447017	human	ensembl	74_37	-1	known	missense	c.269	p.I90S	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM2	HGNC	ENSG00000163995				22	0	0	20	3	13.0435
WDFY3	0	genome.wustl.edu	37	4	85612843	85612843	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	85612843	85612843	T	C	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.9145	p.T3049A	1.000	superfamily_WD40_repeat_dom	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625				111	0	0	91	12	11.6505
PTPN13	0	genome.wustl.edu	37	4	87684044	87684044	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	4	87684044	87684044	C	T	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	missense	c.3718	p.R1240W	0.985	pirsf_Tyr_Pase_non-rcpt_typ-13	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629				107	0	0	68	5	6.84932
AQPEP	0	genome.wustl.edu	37	5	115329482	115329482	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	115329482	115329482	G	T	SNP	AQPEP	ENST00000357872	human	ensembl	74_37	+1	known	missense	c.1305	p.W435C	1.000	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_gn	ENSG00000172901				83	0	0	91	8	8.08081
TNFAIP8	0	genome.wustl.edu	37	5	118728940	118728940	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	118728940	118728940	G	A	SNP	TNFAIP8	ENST00000504771	human	ensembl	74_37	+1	known	missense	c.461	p.R154Q	1.000	pfam_DUF758	pfam_DUF758	-	no_errors	TNFAIP8	HGNC	ENSG00000145779				153	0	0	88	57	39.3103
ADAMTS19	0	genome.wustl.edu	37	5	128984637	128984637	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	128984637	128984637	T	G	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	missense	c.2132	p.L711R	0.992	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808				156	0	0	140	14	9.09091
ACSL6	0	genome.wustl.edu	37	5	131309069	131309069	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	131309069	131309069	G	A	SNP	ACSL6	ENST00000296869	human	ensembl	74_37	-1	known	missense	c.1093	p.R365C	0.037	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL6	HGNC	ENSG00000164398				85	0	0	54	5	8.47458
SEC24A	0	genome.wustl.edu	37	5	134010343	134010343	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	134010343	134010343	C	T	SNP	SEC24A	ENST00000398844	human	ensembl	74_37	+1	known	nonsense	c.856	p.R286*	0.991	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24A	HGNC	ENSG00000113615				101	0	0	87	8	8.42105
PCDHA10	0	genome.wustl.edu	37	5	140236619	140236619	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	140236619	140236619	T	C	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	missense	c.986	p.M329T	0.184	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120				144	0	0	86	59	40.6897
PCDHB4	0	genome.wustl.edu	37	5	140503423	140503423	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	140503423	140503423	G	A	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	missense	c.1843	p.G615S	0.007	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818				179	0	0	112	69	38.1215
CYFIP2	0	genome.wustl.edu	37	5	156768085	156768085	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	156768085	156768085	C	T	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	missense	c.2668	p.R890W	1.000	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163				86	0	0	66	10	13.1579
ATP10B	0	genome.wustl.edu	37	5	160029609	160029609	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	160029609	160029609	A	T	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.3338	p.V1113E	1.000	tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322				77	0	0	32	18	36
FOXI1	0	genome.wustl.edu	37	5	169533337	169533337	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	169533337	169533337	T	C	SNP	FOXI1	ENST00000306268	human	ensembl	74_37	+1	known	missense	c.376	p.Y126H	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXI1	HGNC	ENSG00000168269				27	0	0	21	3	12.5
FBXW11	0	genome.wustl.edu	37	5	171305023	171305023	+	Silent	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	171305023	171305023	A	C	SNP	FBXW11	ENST00000265094	human	ensembl	74_37	-1	known	silent	c.900	p.S300	0.005	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW11	HGNC	ENSG00000072803				65	0	0	61	9	12.8571
NKX2-5	0	genome.wustl.edu	37	5	172659820	172659820	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	172659820	172659820	C	T	SNP	NKX2-5	ENST00000329198	human	ensembl	74_37	-1	known	missense	c.727	p.V243M	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-5	HGNC	ENSG00000183072				41	0	0	30	3	9.09091
GRM6	0	genome.wustl.edu	37	5	178408716	178408716	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	178408716	178408716	T	C	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	missense	c.2576	p.K859R	0.994	pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_6	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262				143	0	0	113	13	10.3175
NSUN2	0	genome.wustl.edu	37	5	6604732	6604732	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	5	6604732	6604732	G	A	SNP	NSUN2	ENST00000264670	human	ensembl	74_37	-1	known	missense	c.1804	p.R602W	1.000	NULL	pfam_Fmu/NOL1/Nop2p,prints_RCMT,prints_RCMT_NCL1	-	no_errors	NSUN2	HGNC	ENSG00000037474				88	0	0	64	30	31.9149
TBC1D32	0	genome.wustl.edu	37	6	121563368	121563368	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	121563368	121563368	A	T	SNP	TBC1D32	ENST00000275159	human	ensembl	74_37	-1	putative	missense	c.2136	p.N712K	0.813	NULL	superfamily_Rab-GTPase-TBC_dom	-	no_errors	TBC1D32	HGNC	ENSG00000146350				87	0	0	58	13	18.3099
KIAA0408	0	genome.wustl.edu	37	6	127771272	127771272	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	127771272	127771272	C	G	SNP	KIAA0408	ENST00000483725	human	ensembl	74_37	-1	novel	missense	c.361	p.E121Q	0.819	NULL	NULL	-	no_errors	KIAA0408	HGNC	ENSG00000189367				152	0	0	88	66	42.8571
IL22RA2	0	genome.wustl.edu	37	6	137476154	137476154	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	137476154	137476154	G	A	SNP	IL22RA2	ENST00000296980	human	ensembl	74_37	-1	known	silent	c.396	p.Y132	0.639	superfamily_Fibronectin_type3	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3	-	no_errors	IL22RA2	HGNC	ENSG00000164485				200	0	0	169	20	10.582
AIG1	0	genome.wustl.edu	37	6	143605350	143605350	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	143605350	143605350	G	C	SNP	AIG1	ENST00000275235	human	ensembl	74_37	+1	known	missense	c.503	p.G168A	1.000	pfam_Far-17a_AIG1	pfam_Far-17a_AIG1	-	no_errors	AIG1	HGNC	ENSG00000146416				53	0	0	41	8	16.3265
ZDHHC14	0	genome.wustl.edu	37	6	158093811	158093811	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	158093811	158093811	C	T	SNP	ZDHHC14	ENST00000359775	human	ensembl	74_37	+1	known	missense	c.1124	p.T375M	0.051	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC14	HGNC	ENSG00000175048				69	0	0	42	8	16
HIST1H1E	0	genome.wustl.edu	37	6	26157095	26157095	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	26157095	26157095	G	C	SNP	HIST1H1E	ENST00000304218	human	ensembl	74_37	+1	known	missense	c.477	p.K159N	1.000	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1E	HGNC	ENSG00000168298				29	0	0	11	5	31.25
ZNF184	0	genome.wustl.edu	37	6	27419285	27419285	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	27419285	27419285	G	C	SNP	ZNF184	ENST00000211936	human	ensembl	74_37	-1	known	missense	c.2053	p.L685V	0.880	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF184	HGNC	ENSG00000096654				120	0	0	85	46	35.1145
SCAND3	0	genome.wustl.edu	37	6	28542681	28542681	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	28542681	28542681	A	C	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	missense	c.1801	p.L601V	0.989	NULL	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040				50	0	0	28	24	46.1538
POLH	0	genome.wustl.edu	37	6	43582081	43582081	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	43582081	43582081	G	A	SNP	POLH	ENST00000372236	human	ensembl	74_37	+1	known	silent	c.1929	p.P643	0.034	pirsf_DNA_pol_eta	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,superfamily_DNA_pol_Y-fam_little_finger,pirsf_DNA_pol_eta,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	POLH	HGNC	ENSG00000170734				277	0	0	234	36	13.3333
BAI3	0	genome.wustl.edu	37	6	69348631	69348631	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	69348631	69348631	T	G	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.64	p.F22V	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				120	0	0	97	11	10.1852
BAI3	0	genome.wustl.edu	37	6	70037721	70037721	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	70037721	70037721	C	G	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.2975	p.A992G	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				77	0	0	50	9	15.2542
COL12A1	0	genome.wustl.edu	37	6	75892916	75892916	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	75892916	75892916	G	A	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.1741	p.R581C	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799				116	0	0	91	13	12.5
MDN1	0	genome.wustl.edu	37	6	90403852	90403852	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	90403852	90403852	C	T	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	silent	c.9822	p.L3274	0.888	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				141	0	0	90	19	17.4312
EPHA7	0	genome.wustl.edu	37	6	94120278	94120278	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	94120278	94120278	A	C	SNP	EPHA7	ENST00000369303	human	ensembl	74_37	-1	known	missense	c.773	p.V258G	1.000	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA7	HGNC	ENSG00000135333				121	0	0	68	26	27.6596
AASS	0	genome.wustl.edu	37	7	121773649	121773649	+	Silent	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	121773649	121773649	G	C	SNP	AASS	ENST00000393376	human	ensembl	74_37	-1	known	silent	c.132	p.P44	0.043	pfam_AlaDH/PNT_N	pfam_Saccharopine_DH/HSpermid_syn,pfam_AlaDH/PNT_NAD(H)-bd,pfam_AlaDH/PNT_N	-	no_errors	AASS	HGNC	ENSG00000008311				114	0	0	114	10	8.06452
TMEM176B	0	genome.wustl.edu	37	7	150493586	150493586	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	150493586	150493586	G	A	SNP	TMEM176B	ENST00000326442	human	ensembl	74_37	-1	known	silent	c.72	p.N24	0.019	NULL	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	-	no_errors	TMEM176B	HGNC	ENSG00000106565				117	0	0	60	26	30.2326
XRCC2	0	genome.wustl.edu	37	7	152345889	152345889	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	152345889	152345889	G	A	SNP	XRCC2	ENST00000359321	human	ensembl	74_37	-1	known	silent	c.681	p.L227	0.990	superfamily_P-loop_NTPase	pfam_DNA_recomb/repair_Rad51_C,superfamily_P-loop_NTPase,pfscan_DNA_recomb_RecA/RadB_ATP-bd	-	no_errors	XRCC2	HGNC	ENSG00000196584				173	0	0	125	37	22.8395
KLHL7	0	genome.wustl.edu	37	7	23164761	23164761	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	23164761	23164761	A	G	SNP	KLHL7	ENST00000339077	human	ensembl	74_37	+1	known	missense	c.412	p.K138E	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550				94	0	0	82	13	13.6842
TYW1	0	genome.wustl.edu	37	7	66482880	66482880	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	66482880	66482880	C	T	SNP	TYW1	ENST00000359626	human	ensembl	74_37	+1	known	missense	c.611	p.A204V	0.971	pfam_Flavodoxin/NO_synth,pfscan_Flavodoxin/NO_synth,prints_Flavdoxin	pfam_rSAM,pfam_Flavodoxin/NO_synth,pfam_tRNA_wybutosine-synth,pfscan_Flavodoxin/NO_synth,prints_Flavdoxin	-	no_errors	TYW1	HGNC	ENSG00000198874				99	0	0	73	5	6.41026
CD36	0	genome.wustl.edu	37	7	80292468	80292468	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	80292468	80292468	G	C	SNP	CD36	ENST00000309881	human	ensembl	74_37	+1	known	missense	c.592	p.V198L	0.531	pfam_CD36,prints_CD36_antigen	pfam_CD36,prints_CD36_antigen,prints_CD36	-	no_errors	CD36	HGNC	ENSG00000135218				128	0	0	98	14	12.5
STEAP2	0	genome.wustl.edu	37	7	89856419	89856419	+	Silent	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	89856419	89856419	T	C	SNP	STEAP2	ENST00000287908	human	ensembl	74_37	+1	known	silent	c.627	p.F209	1.000	NULL	pfam_Fe3_Rdtase_TM_dom	-	no_errors	STEAP2	HGNC	ENSG00000157214				128	0	0	100	20	16.6667
NPTX2	0	genome.wustl.edu	37	7	98257773	98257773	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	7	98257773	98257773	C	G	SNP	NPTX2	ENST00000265634	human	ensembl	74_37	+1	known	missense	c.1128	p.F376L	1.000	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTX2	HGNC	ENSG00000106236				25	0	0	24	8	25
VPS13B	0	genome.wustl.edu	37	8	100789121	100789121	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	100789121	100789121	G	A	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	missense	c.7441	p.V2481I	0.933	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549				210	1	0.473934	201	21	9.45946
ZFPM2	0	genome.wustl.edu	37	8	106815226	106815226	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	106815226	106815226	A	G	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.2916	p.I972M	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946				27	0	0	25	5	16.6667
ANGPT1	0	genome.wustl.edu	37	8	108334209	108334209	+	Silent	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	108334209	108334209	G	A	SNP	ANGPT1	ENST00000517746	human	ensembl	74_37	-1	known	silent	c.723	p.T241	0.619	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT1	HGNC	ENSG00000154188				127	0	0	115	24	17.2662
CSMD3	0	genome.wustl.edu	37	8	114326962	114326962	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	114326962	114326962	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.239	p.G80D	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				166	0	0	207	19	8.40708
WISP1	0	genome.wustl.edu	37	8	134233067	134233067	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	134233067	134233067	G	A	SNP	WISP1	ENST00000250160	human	ensembl	74_37	+1	known	missense	c.593	p.R198H	0.682	pirsf_IGFBP_CNN	pfam_IGFBP-like,pfam_VWF_C,pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	WISP1	HGNC	ENSG00000104415				62	0	0	60	21	25.9259
COL22A1	0	genome.wustl.edu	37	8	139606337	139606337	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	139606337	139606337	C	A	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	missense	c.4538	p.R1513L	0.141	pfam_Collagen	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436				97	0	0	91	24	20.8696
LY6D	0	genome.wustl.edu	37	8	143866833	143866833	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	143866833	143866833	G	A	SNP	LY6D	ENST00000301263	human	ensembl	74_37	-1	known	missense	c.191	p.A64V	0.000	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LY6D	HGNC	ENSG00000167656				67	0	0	60	22	26.8293
CYP11B2	0	genome.wustl.edu	37	8	143999195	143999195	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	143999195	143999195	G	T	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	missense	c.62	p.A21E	0.098	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142				228	0	0	228	17	6.93878
CPSF1	0	genome.wustl.edu	37	8	145622772	145622772	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	145622772	145622772	C	T	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	missense	c.2315	p.R772Q	0.954	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894				80	0	0	62	31	33.3333
MYOM2	0	genome.wustl.edu	37	8	2092797	2092797	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	2092797	2092797	C	T	SNP	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	silent	c.4290	p.D1430	0.197	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448				107	0	0	48	41	46.0674
ADAM7	0	genome.wustl.edu	37	8	24344712	24344712	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	24344712	24344712	G	A	SNP	ADAM7	ENST00000175238	human	ensembl	74_37	+1	known	missense	c.973	p.D325N	0.997	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM7	HGNC	ENSG00000069206				58	0	0	46	31	40.2597
CSMD1	0	genome.wustl.edu	37	8	3087592	3087592	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	3087592	3087592	A	G	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.4318	p.F1440L	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				78	0	0	74	6	7.5
CHRNB3	0	genome.wustl.edu	37	8	42591674	42591674	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	42591674	42591674	C	T	SNP	CHRNB3	ENST00000289957	human	ensembl	74_37	+1	known	silent	c.1290	p.F430	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB3	HGNC	ENSG00000147432				287	0	0	150	73	32.7354
PXDNL	0	genome.wustl.edu	37	8	52323869	52323869	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	52323869	52323869	G	A	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.2003	p.T668M	0.571	NULL	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485				20	0	0	13	3	18.75
E2F5	0	genome.wustl.edu	37	8	86115407	86115407	+	Silent	SNP	A	A	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	86115407	86115407	A	G	SNP	E2F5	ENST00000256117	human	ensembl	74_37	+1	known	silent	c.423	p.E141	0.201	NULL	pfam_E2F_TDP	-	no_errors	E2F5	HGNC	ENSG00000133740				49	0	0	50	6	10.7143
ATP6V0D2	0	genome.wustl.edu	37	8	87111221	87111221	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	87111221	87111221	C	T	SNP	ATP6V0D2	ENST00000285393	human	ensembl	74_37	+1	known	missense	c.14	p.A5V	0.136	pirsf_ATPase_V0-cplx_dsu	pfam_ATPase_V0-cplx_csu/dsu,superfamily_ATPase_V0-cplx_csu/dsu,pirsf_ATPase_V0-cplx_dsu	-	no_errors	ATP6V0D2	HGNC	ENSG00000147614				118	0	0	114	9	7.31707
CNBD1	0	genome.wustl.edu	37	8	88365898	88365898	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	88365898	88365898	T	C	SNP	CNBD1	ENST00000518476	human	ensembl	74_37	+1	known	missense	c.1187	p.L396P	0.229	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNBD1	HGNC	ENSG00000176571				67	0	0	59	17	22.3684
TSPYL5	0	genome.wustl.edu	37	8	98289633	98289633	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	8	98289633	98289633	T	C	SNP	TSPYL5	ENST00000322128	human	ensembl	74_37	-1	known	missense	c.440	p.K147R	0.975	NULL	pfam_NAP_family	-	no_errors	TSPYL5	HGNC	ENSG00000180543				138	0	0	147	14	8.69565
C9orf43	0	genome.wustl.edu	37	9	116183431	116183431	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	116183431	116183431	G	A	SNP	C9orf43	ENST00000288462	human	ensembl	74_37	+1	known	missense	c.394	p.V132I	0.003	NULL	NULL	-	no_errors	C9orf43	HGNC	ENSG00000157653				125	0	0	94	16	14.5455
NUP214	0	genome.wustl.edu	37	9	134098270	134098270	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	134098270	134098270	G	A	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.5858	p.G1953E	1.000	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883				120	0	0	66	36	35.2941
C9orf172	0	genome.wustl.edu	37	9	139741626	139741626	+	Silent	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	139741626	139741626	C	T	SNP	C9orf172	ENST00000436881	human	ensembl	74_37	+1	known	silent	c.2760	p.V920	1.000	NULL	NULL	-	no_errors	C9orf172	HGNC	ENSG00000232434				43	0	0	44	7	13.7255
CACNA1B	0	genome.wustl.edu	37	9	141016021	141016021	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	141016021	141016021	C	T	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.6593	p.P2198L	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408				52	0	0	35	7	16.6667
LOC100996870	0	genome.wustl.edu	37	9	66459813	66459813	+	RNA	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	66459813	66459813	G	A	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				19	0	0	16	5	23.8095
LOC100996870	0	genome.wustl.edu	37	9	66459862	66459862	+	RNA	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	66459862	66459862	T	C	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.133	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				30	0	0	20	3	13.0435
LOC100996870	0	genome.wustl.edu	37	9	66459863	66459863	+	RNA	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	66459863	66459863	G	A	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.135	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				29	0	0	20	3	13.0435
LOC100996870	0	genome.wustl.edu	37	9	66466418	66466418	+	RNA	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	66466418	66466418	C	T	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				10	0	0	15	3	16.6667
IARS	0	genome.wustl.edu	37	9	95009793	95009793	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	95009793	95009793	T	G	SNP	IARS	ENST00000375643	human	ensembl	74_37	-1	known	missense	c.2657	p.N886T	1.000	superfamily_tRNAsynth_1a_anticodon-bd	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Ile-tRNA-ligase,tigrfam_Ile-tRNA-ligase	-	no_errors	IARS	HGNC	ENSG00000196305				77	0	0	37	27	42.1875
MT-ND5	0	genome.wustl.edu	37	MT	13757	13757	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	MT	13757	13757	C	T	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.1421	p.P474L	NULL	pfam_NADH_DH_su5_C,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786				48	0	0	32	105	76.6423
DCAF12L1	0	genome.wustl.edu	37	X	125685222	125685222	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	125685222	125685222	T	G	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.1370	p.N457T	0.999	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889				100	0	0	47	62	56.8807
GPR50	0	genome.wustl.edu	37	X	150349386	150349386	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	150349386	150349386	T	C	SNP	GPR50	ENST00000218316	human	ensembl	74_37	+1	known	missense	c.1331	p.V444A	0.693	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Mel_rcpt_1X,prints_GPCR_Rhodpsn,prints_Melatonin_rcpt,prints_NPY_rcpt	-	no_errors	GPR50	HGNC	ENSG00000102195				346	0	0	305	56	15.5125
F8	0	genome.wustl.edu	37	X	154159298	154159298	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	154159298	154159298	A	C	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	missense	c.2767	p.L923V	0.001	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010				65	0	0	36	50	58.1395
CLIC2	0	genome.wustl.edu	37	X	154508537	154508537	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	154508537	154508537	G	C	SNP	CLIC2	ENST00000369449	human	ensembl	74_37	-1	known	missense	c.483	p.D161E	1.000	superfamily_Glutathione-S-Trfase_C-like,tigrfam_Int_Cl_channel	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC2	HGNC	ENSG00000155962				59	0	0	30	42	58.3333
MAGEB18	0	genome.wustl.edu	37	X	26157988	26157988	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	26157988	26157988	C	T	SNP	MAGEB18	ENST00000325250	human	ensembl	74_37	+1	known	missense	c.886	p.P296S	0.077	pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB18	HGNC	ENSG00000176774				33	0	0	11	16	59.2593
DMD	0	genome.wustl.edu	37	X	32563331	32563331	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	32563331	32563331	G	C	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.2113	p.P705A	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				53	0	0	55	8	12.6984
SHROOM4	0	genome.wustl.edu	37	X	50376644	50376644	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	50376644	50376644	T	G	SNP	SHROOM4	ENST00000289292	human	ensembl	74_37	-1	known	missense	c.2429	p.N810T	0.889	NULL	pfam_ASD2,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM4	HGNC	ENSG00000158352				147	1	0.675676	66	76	53.5211
FAM155B	0	genome.wustl.edu	37	X	68749674	68749674	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	68749674	68749674	C	T	SNP	FAM155B	ENST00000252338	human	ensembl	74_37	+1	known	missense	c.1294	p.R432W	1.000	NULL	NULL	-	no_errors	FAM155B	HGNC	ENSG00000130054				55	0	0	30	34	53.125
ERCC6L	0	genome.wustl.edu	37	X	71427962	71427962	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	71427962	71427962	C	T	SNP	ERCC6L	ENST00000334463	human	ensembl	74_37	-1	known	missense	c.655	p.E219K	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_TPR-contain_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6L	HGNC	ENSG00000186871				89	0	0	49	67	57.7586
CITED1	0	genome.wustl.edu	37	X	71522051	71522051	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	71522051	71522051	G	A	SNP	CITED1	ENST00000431381	human	ensembl	74_37	-1	known	missense	c.182	p.A61V	0.002	pfam_CITED	pfam_CITED	-	no_errors	CITED1	HGNC	ENSG00000125931				14	0	0	6	10	62.5
PNPLA4	0	genome.wustl.edu	37	X	7880119	7880119	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	7880119	7880119	T	G	SNP	PNPLA4	ENST00000381042	human	ensembl	74_37	-1	known	missense	c.427	p.S143R	1.000	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA4	HGNC	ENSG00000006757				57	0	0	77	19	19.7917
DACH2	0	genome.wustl.edu	37	X	85403712	85403712	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	X	85403712	85403712	T	C	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.88	p.S30P	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733				19	0	0	3	24	88.8889
NRAS	0	genome.wustl.edu	37	1	115251215	115251216	+	Frame_Shift_Ins	INS	-	-	T			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	115251215	115251216	-	T	INS	NRAS	ENST00000369535	human	ensembl	74_37	-1	known	frame_shift_ins	c.511_510	p.L170fs	1.000:0.991	superfamily_P-loop_NTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	NRAS	HGNC	ENSG00000213281				177	0	0	129	59	31.383
ARID1A	0	genome.wustl.edu	37	1	27023751	27023755	+	Frame_Shift_Del	DEL	CTCCC	CTCCC	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	CTCCC	CTCCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	1	27023751	27023755	CTCCC	-	DEL	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_del	c.857_861	p.P287fs	1.000:1.000:1.000:1.000:0.996	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				15	0	0	13	6	31.5789
CBL	0	genome.wustl.edu	37	11	119077233	119077235	+	In_Frame_Del	DEL	CAC	CAC	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	CAC	CAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	11	119077233	119077235	CAC	-	DEL	CBL	ENST00000264033	human	ensembl	74_37	+1	known	in_frame_del	c.106_108	p.H39in_frame_del	0.999:1.000:1.000	NULL	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBL	HGNC	ENSG00000110395				10	0	0	4	2	33.3333
MGAT5	0	genome.wustl.edu	37	2	135027982	135027985	+	Frame_Shift_Del	DEL	ATTA	ATTA	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	ATTA	ATTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	135027982	135027985	ATTA	-	DEL	MGAT5	ENST00000281923	human	ensembl	74_37	+1	known	frame_shift_del	c.267_270	p.L90fs	0.562:0.571:1.000:1.000	NULL	NULL	-	no_errors	MGAT5	HGNC	ENSG00000152127				113	0	0	106	10	8.62069
HDLBP	0	genome.wustl.edu	37	2	242179184	242179185	+	In_Frame_Ins	INS	-	-	GTG			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	2	242179184	242179185	-	GTG	INS	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	in_frame_ins	c.2443_2442	p.814in_frame_insH	1.000:0.998	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677				113	0	0	71	16	18.3908
PPP1R11	0	genome.wustl.edu	37	6	30036476	30036479	+	Splice_Site	DEL	GTGA	GTGA	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	GTGA	GTGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	30036476	30036479	GTGA	-	DEL	PPP1R11	ENST00000376772	human	ensembl	74_37	+1	known	splice_site_del	c.178+1_178+1	e2+1	1.000:1.000:1.000:1.000	-	-	-	no_errors	PPP1R11	HGNC	ENSG00000204619				66	0	0	62	10	13.8889
PSMB9	0	genome.wustl.edu	37	6	32825114	32825116	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	6	32825114	32825116	CAG	-	DEL	PSMB9	ENST00000374859	human	ensembl	74_37	+1	known	in_frame_del	c.203_205	p.A70in_frame_del	0.984:0.049:0.995	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB9	HGNC	ENSG00000240065				108	0	0	71	6	7.79221
LOC100996870	0	genome.wustl.edu	37	9	66466800	66466800	+	RNA	DEL	G	G	-			TCGA-RD-A7C1-01A-11D-A32N-08	TCGA-RD-A7C1-10A-01D-A32N-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9525681b-7e66-4fd3-8eb0-583ba442b4e1	2b46b8b7-28da-4e67-a5ae-77c9e631aabd	9	66466800	66466800	G	-	DEL	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.134	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113				10	0	0	17	3	15
