Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AGAP5	0	genome.wustl.edu	37	10	75435828	75435828	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	10	75435828	75435828	G	A	SNP	AGAP5	ENST00000374094	human	ensembl	74_37	-1	known	missense	c.590	p.S197F	0.999	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGAP5	HGNC	ENSG00000172650	tier1	-	-	47	0	0.00	42	8	16.00
AGBL1	0	genome.wustl.edu	37	15	86838560	86838560	+	Silent	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	15	86838560	86838560	G	A	SNP	AGBL1	ENST00000441037	human	ensembl	74_37	+1	known	silent	c.2157	p.T719	0.000	pfam_Peptidase_M14	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGBL1	HGNC	ENSG00000166748	tier1	-	-	36	0	0.00	49	7	12.50
ALDH1A3	0	genome.wustl.edu	37	15	101445785	101445785	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	15	101445785	101445785	G	A	SNP	ALDH1A3	ENST00000329841	human	ensembl	74_37	+1	known	missense	c.1126	p.G376R	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A3	HGNC	ENSG00000184254	tier1	-	-	37	0	0.00	35	8	18.18
ANKHD1	0	genome.wustl.edu	37	5	139917030	139917030	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	5	139917030	139917030	C	T	SNP	ANKHD1	ENST00000297183	human	ensembl	74_37	+1	known	nonsense	c.7084	p.R2362*	1.000	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKHD1	HGNC	ENSG00000131503	tier1	-	-	56	0	0.00	35	7	16.67
AOC2	0	genome.wustl.edu	37	17	40997634	40997634	+	Frame_Shift_Del	DEL	T	T	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	17	40997634	40997634	T	-	DEL	AOC2	ENST00000253799	human	ensembl	74_37	+1	known	frame_shift_del	c.991	p.F331fs	0.950	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N3,pfam_Cu_amine_oxidase_N2,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC2	HGNC	ENSG00000131480	tier1			106	0	0.00	93	13	12.26
APOB	0	genome.wustl.edu	37	2	21230875	21230875	+	Silent	SNP	A	A	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	2	21230875	21230875	A	C	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	silent	c.8865	p.T2955	0.071	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	111	0	0.00	85	11	11.46
ARHGAP20	0	genome.wustl.edu	37	11	110451341	110451341	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	11	110451341	110451341	T	C	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	missense	c.2329	p.T777A	0.007	NULL	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727	tier1	-	-	118	0	0.00	134	15	10.00
ASPH	0	genome.wustl.edu	37	8	62550924	62550925	+	Splice_Site	INS	-	-	AA			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	8	62550924	62550925	-	AA	INS	ASPH	ENST00000379454	human	ensembl	74_37	-1	known	splice_site_ins	c.791-3_791-2	e11-2	0.000:0.002	-	-	-	no_errors	ASPH	HGNC	ENSG00000198363	tier1			48	0	0.00	40	4	9.09
ATM	0	genome.wustl.edu	37	11	108117812	108117813	+	Frame_Shift_Ins	INS	-	-	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	11	108117812	108117813	-	A	INS	ATM	ENST00000278616	human	ensembl	74_37	+1	known	frame_shift_ins	c.1023_1024	p.E342fs	0.954:1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	tier1			56	0	0.00	47	16	25.40
BCL3	0	genome.wustl.edu	37	19	45254599	45254599	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	19	45254599	45254599	C	A	SNP	BCL3	ENST00000164227	human	ensembl	74_37	+1	known	missense	c.372	p.D124E	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	BCL3	HGNC	ENSG00000069399	tier1	-	-	62	0	0.00	28	7	20.00
BPIFB4	0	genome.wustl.edu	37	20	31692647	31692647	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	20	31692647	31692647	T	A	SNP	BPIFB4	ENST00000375483	human	ensembl	74_37	+1	known	missense	c.1712	p.I571N	0.988	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191	tier1	-	-	66	0	0.00	65	5	7.14
C16orf58	0	genome.wustl.edu	37	16	31512026	31512026	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	16	31512026	31512026	C	T	SNP	C16orf58	ENST00000327237	human	ensembl	74_37	-1	known	missense	c.442	p.V148I	0.005	pfam_RUS2/WXR1	pfam_RUS2/WXR1	-	no_errors	C16orf58	HGNC	ENSG00000140688	tier1	-	-	34	0	0.00	28	4	12.12
CAD	0	genome.wustl.edu	37	2	27465798	27465798	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	2	27465798	27465798	G	A	SNP	CAD	ENST00000264705	human	ensembl	74_37	+1	known	missense	c.6437	p.R2146Q	1.000	pfam_Asp_carbamoyltransf_Asp/Orn-bd,superfamily_Asp/Orn_carbamoylTrfase,prints_Asp_carbamoyltransf,tigrfam_Asp_carbamoyltransf	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				40	0	0.00	30	3	9.09
CCDC64	0	genome.wustl.edu	37	12	120510450	120510450	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	12	120510450	120510450	G	A	SNP	CCDC64	ENST00000257583	human	ensembl	74_37	+1	known	missense	c.172	p.D58N	1.000	NULL	NULL	-	no_errors	CCDC64	HGNC	ENSG00000135127	tier1	-	-	49	0	0.00	41	8	16.00
CDR1	0	genome.wustl.edu	37	X	139865800	139865800	+	Silent	SNP	C	C	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	X	139865800	139865800	C	A	SNP	CDR1	ENST00000370532	human	ensembl	74_37	-1	known	silent	c.732	p.L244	0.001	NULL	NULL	-	no_errors	CDR1	HGNC	ENSG00000184258	tier1	-	-	50	0	0.00	33	12	26.67
CNKSR1	0	genome.wustl.edu	37	1	26515839	26515839	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	1	26515839	26515839	C	T	SNP	CNKSR1	ENST00000374253	human	ensembl	74_37	+1	known	missense	c.1963	p.R655C	0.984	NULL	pfam_CRIC_domain_Chordata,pfam_Pleckstrin_homology,pfam_SAM_type1,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR1	HGNC	ENSG00000142675	tier1	-	-	38	0	0.00	17	4	19.05
CYP26A1	0	genome.wustl.edu	37	10	94834731	94834731	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	10	94834731	94834731	G	A	SNP	CYP26A1	ENST00000224356	human	ensembl	74_37	+1	known	missense	c.610	p.G204R	0.889	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP26A1	HGNC	ENSG00000095596	tier1	-	-	65	0	0.00	30	11	26.83
DSC3	0	genome.wustl.edu	37	18	28588123	28588123	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	18	28588123	28588123	A	G	SNP	DSC3	ENST00000360428	human	ensembl	74_37	-1	known	missense	c.1522	p.Y508H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin/Desmocollin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin,prints_Desmosomal_cadherin	-	no_errors	DSC3	HGNC	ENSG00000134762	tier1	-	-	31	0	0.00	26	11	28.21
EGR2	0	genome.wustl.edu	37	10	64573442	64573442	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	10	64573442	64573442	G	T	SNP	EGR2	ENST00000242480	human	ensembl	74_37	-1	known	missense	c.956	p.P319H	1.000	NULL	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR2	HGNC	ENSG00000122877	tier1	-	-	66	0	0.00	25	13	34.21
FAM107B	0	genome.wustl.edu	37	10	14572425	14572425	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	10	14572425	14572425	G	A	SNP	FAM107B	ENST00000181796	human	ensembl	74_37	-1	known	missense	c.559	p.P187S	1.000	pfam_DUF1151	pfam_DUF1151	-	no_errors	FAM107B	HGNC	ENSG00000065809	tier1	-	-	78	0	0.00	87	9	9.38
FAM13A-AS1	0	genome.wustl.edu	37	4	89649875	89649875	+	RNA	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	4	89649875	89649875	C	T	SNP	FAM13A-AS1	ENST00000500765	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FAM13A-AS1	HGNC	ENSG00000248019	tier1	-	-	46	0	0.00	40	5	11.11
FLNC	0	genome.wustl.edu	37	7	128486499	128486499	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	7	128486499	128486499	G	A	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	missense	c.4109	p.R1370Q	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	tier1	-	-	61	0	0.00	56	9	13.85
FOXP2	0	genome.wustl.edu	37	7	114270047	114270047	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	7	114270047	114270047	A	G	SNP	FOXP2	ENST00000408937	human	ensembl	74_37	+1	known	missense	c.659	p.K220R	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP2	HGNC	ENSG00000128573	tier1	-	-	86	0	0.00	75	5	6.25
FSCB	0	genome.wustl.edu	37	14	44974297	44974297	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	14	44974297	44974297	C	A	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.1894	p.A632S	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139				22	0	0.00	25	2	7.41
GPAT2	0	genome.wustl.edu	37	2	96698123	96698123	+	RNA	DEL	C	C	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	2	96698123	96698123	C	-	DEL	GPAT2	ENST00000468438	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPAT2	HGNC	ENSG00000186281	tier1			8	0	0.00	4	2	33.33
GRK4	0	genome.wustl.edu	37	4	3040280	3040280	+	RNA	DEL	A	A	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	4	3040280	3040280	A	-	DEL	GRK4	ENST00000504308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	GRK4	HGNC	ENSG00000125388	tier1			35	0	0.00	25	5	16.67
HACE1	0	genome.wustl.edu	37	6	105198231	105198231	+	Frame_Shift_Del	DEL	A	A	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	6	105198231	105198231	A	-	DEL	HACE1	ENST00000262903	human	ensembl	74_37	-1	known	frame_shift_del	c.2328	p.F776fs	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT,prints_Ankyrin_rpt	-	no_errors	HACE1	HGNC	ENSG00000085382	tier1			32	0	0.00	25	3	10.71
HMCN1	0	genome.wustl.edu	37	1	186084516	186084516	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	1	186084516	186084516	T	G	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.11531	p.L3844R	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	41	0	0.00	29	15	34.09
HOXD4	0	genome.wustl.edu	37	2	177017489	177017489	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	2	177017489	177017489	G	A	SNP	HOXD4	ENST00000306324	human	ensembl	74_37	+1	known	missense	c.587	p.R196H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXD4	HGNC	ENSG00000170166	tier1	-	-	53	0	0.00	44	7	13.73
IFT140	0	genome.wustl.edu	37	16	1612045	1612045	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	16	1612045	1612045	G	T	SNP	IFT140	ENST00000426508	human	ensembl	74_37	-1	known	missense	c.2140	p.P714T	0.998	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535	tier1	-	-	46	0	0.00	35	4	10.26
IGHV1OR21-1	0	genome.wustl.edu	37	21	10862800	10862800	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	21	10862800	10862800	G	C	SNP	IGHV1OR21-1	ENST00000559480	human	ensembl	74_37	+1	known	missense	c.96	p.K32N	1.000	pfam_Ig_V-set,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGHV1OR21-1	HGNC	ENSG00000169861	tier1	-	-	158	0	0.00	149	8	5.10
IMPG2	0	genome.wustl.edu	37	3	100963269	100963269	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	3	100963269	100963269	C	G	SNP	IMPG2	ENST00000193391	human	ensembl	74_37	-1	known	missense	c.1906	p.D636H	0.455	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG2	HGNC	ENSG00000081148	tier1	-	-	76	0	0.00	66	19	22.35
IRF2	0	genome.wustl.edu	37	4	185329386	185329386	+	Frame_Shift_Del	DEL	C	C	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	4	185329386	185329386	C	-	DEL	IRF2	ENST00000393593	human	ensembl	74_37	-1	known	frame_shift_del	c.455	p.S152fs	1.000	pirsf_Interferon_reg_fac-1/2	pfam_Interferon_reg_fact_DNA-bd_dom,smart_Interferon_reg_fact_DNA-bd_dom,pirsf_Interferon_reg_fac-1/2,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF2	HGNC	ENSG00000168310	tier1			93	0	0.00	43	23	34.85
ITGAD	0	genome.wustl.edu	37	16	31425795	31425795	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	16	31425795	31425795	T	G	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	missense	c.2020	p.F674V	0.892	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886	tier1	-	-	164	0	0.00	94	34	26.36
ITGAX	0	genome.wustl.edu	37	16	31382427	31382427	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	16	31382427	31382427	C	G	SNP	ITGAX	ENST00000268296	human	ensembl	74_37	+1	known	missense	c.1733	p.S578C	0.000	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAX	HGNC	ENSG00000140678	tier1	-	-	101	0	0.00	56	14	20.00
JAKMIP1	0	genome.wustl.edu	37	4	6082031	6082031	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	4	6082031	6082031	C	A	SNP	JAKMIP1	ENST00000409021	human	ensembl	74_37	-1	known	missense	c.1110	p.K370N	1.000	NULL	NULL	-	no_errors	JAKMIP1	HGNC	ENSG00000152969				25	0	0.00	35	4	10.26
KCNK5	0	genome.wustl.edu	37	6	39158884	39158884	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	6	39158884	39158884	C	T	SNP	KCNK5	ENST00000359534	human	ensembl	74_37	-1	known	missense	c.1282	p.G428S	0.647	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK5	HGNC	ENSG00000164626	tier1	-	-	35	0	0.00	22	4	15.38
KCNMB2	0	genome.wustl.edu	37	3	178560470	178560470	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	3	178560470	178560470	T	G	SNP	KCNMB2	ENST00000358316	human	ensembl	74_37	+1	known	missense	c.453	p.N151K	0.997	pfam_K_chnl_Ca-activ_BK_bsu	pfam_K_chnl_Ca-activ_BK_bsu,pfam_KCNMB2_ball_chain_dom,prints_K_chnl_Ca-activ_BK_bsu	-	no_errors	KCNMB2	HGNC	ENSG00000197584	tier1	-	-	97	0	0.00	111	16	12.60
KHDRBS2	0	genome.wustl.edu	37	6	62995777	62995777	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	6	62995777	62995777	C	T	SNP	KHDRBS2	ENST00000281156	human	ensembl	74_37	-1	known	missense	c.77	p.R26H	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS2	HGNC	ENSG00000112232	tier1	-	-	25	0	0.00	26	6	18.75
KMT2B	0	genome.wustl.edu	37	19	36222961	36222961	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	19	36222961	36222961	C	T	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	nonsense	c.5590	p.R1864*	1.000	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1	-	-	23	0	0.00	9	4	30.77
KMT2D	0	genome.wustl.edu	37	12	49425824	49425826	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	12	49425824	49425826	GCT	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	in_frame_del	c.12664_12662	p.Q4221in_frame_del	0.999:1.000:1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1			33	0	0.00	24	2	7.69
LHFPL5	0	genome.wustl.edu	37	6	35773618	35773618	+	Silent	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	6	35773618	35773618	G	A	SNP	LHFPL5	ENST00000360215	human	ensembl	74_37	+1	known	silent	c.171	p.P57	0.154	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL5	HGNC	ENSG00000197753	tier1	-	-	128	0	0.00	83	10	10.75
LRP1	0	genome.wustl.edu	37	12	57578643	57578643	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	12	57578643	57578643	G	A	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.6208	p.D2070N	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1	-	-	35	0	0.00	16	6	27.27
LRP2	0	genome.wustl.edu	37	2	170031820	170031820	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	2	170031820	170031820	G	A	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.10651	p.R3551C	0.998	superfamily_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	-	-	46	0	0.00	45	5	10.00
LYPD3	0	genome.wustl.edu	37	19	43969710	43969710	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	19	43969710	43969710	C	T	SNP	LYPD3	ENST00000244333	human	ensembl	74_37	-1	known	missense	c.14	p.R5K	0.881	NULL	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LYPD3	HGNC	ENSG00000124466	tier1	-	-	42	0	0.00	34	4	10.53
MAEL	0	genome.wustl.edu	37	1	166974588	166974588	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	1	166974588	166974588	C	T	SNP	MAEL	ENST00000367872	human	ensembl	74_37	+1	known	nonsense	c.799	p.R267*	0.998	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,superfamily_CH-domain	-	no_errors	MAEL	HGNC	ENSG00000143194	tier1	-	-	90	0	0.00	115	9	7.26
MBIP	0	genome.wustl.edu	37	14	36770037	36770037	+	RNA	DEL	A	A	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	14	36770037	36770037	A	-	DEL	MBIP	ENST00000604154	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.241	-	-	-	no_errors	MBIP	HGNC	ENSG00000151332	tier1			9	0	0.00	5	3	37.50
MED31	0	genome.wustl.edu	37	17	6547843	6547843	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	17	6547843	6547843	G	A	SNP	MED31	ENST00000225728	human	ensembl	74_37	-1	known	missense	c.340	p.R114C	1.000	pfam_Mediator_Med31	pfam_Mediator_Med31	-	no_errors	MED31	HGNC	ENSG00000108590	tier1	-	-	109	0	0.00	81	20	19.61
MPPED1	0	genome.wustl.edu	37	22	43821167	43821167	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	22	43821167	43821167	C	A	SNP	MPPED1	ENST00000538182	human	ensembl	74_37	+1	known	missense	c.275	p.T92N	1.000	NULL	pfam_PEstase_dom	-	no_errors	MPPED1	HGNC	ENSG00000186732	tier1	-	-	71	0	0.00	33	4	10.81
MTOR	0	genome.wustl.edu	37	1	11291018	11291018	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	1	11291018	11291018	C	A	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.2743	p.V915F	1.000	pfam_DUF3385_TOR,superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793	tier1	-	-	65	0	0.00	43	14	24.56
NLGN1	0	genome.wustl.edu	37	3	173997382	173997382	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	3	173997382	173997382	A	C	SNP	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	missense	c.1711	p.N571H	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760	tier1	-	-	68	0	0.00	54	10	15.62
NNMT	0	genome.wustl.edu	37	11	114182997	114182997	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	11	114182997	114182997	C	T	SNP	NNMT	ENST00000299964	human	ensembl	74_37	+1	known	missense	c.593	p.A198V	0.083	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	NNMT	HGNC	ENSG00000166741	tier1	-	-	57	0	0.00	40	7	14.89
NUP153	0	genome.wustl.edu	37	6	17688812	17688812	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	6	17688812	17688812	A	T	SNP	NUP153	ENST00000537253	human	ensembl	74_37	-1	known	missense	c.149	p.I50N	1.000	NULL	pfam_Nucleoporin_Nup153,pfam_Znf_RanBP2,pfam_Retro-transposon_transp_CS,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	NUP153	HGNC	ENSG00000124789	tier1	-	-	106	0	0.00	102	6	5.56
OCRL	0	genome.wustl.edu	37	X	128691919	128691919	+	Frame_Shift_Del	DEL	T	T	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	X	128691919	128691919	T	-	DEL	OCRL	ENST00000371113	human	ensembl	74_37	+1	known	frame_shift_del	c.431	p.S146fs	0.011	NULL	pfam_Endo/exonuclease/phosphatase,pfam_RhoGAP_dom,superfamily_Endo/exonuclease/phosphatase,superfamily_Rho_GTPase_activation_prot,smart_IPPc,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	OCRL	HGNC	ENSG00000122126	tier1			61	0	0.00	41	11	21.15
OLFML2B	0	genome.wustl.edu	37	1	161953725	161953725	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	1	161953725	161953725	G	A	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	missense	c.1993	p.R665C	1.000	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745	tier1	-	-	52	0	0.00	35	21	37.50
OR4A15	0	genome.wustl.edu	37	11	55135832	55135832	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	11	55135832	55135832	T	C	SNP	OR4A15	ENST00000314706	human	ensembl	74_37	+1	known	missense	c.473	p.L158P	0.356	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A15	HGNC	ENSG00000181958	tier1	-	-	155	0	0.00	149	19	11.31
OR52N4	0	genome.wustl.edu	37	11	5776758	5776758	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	11	5776758	5776758	C	A	SNP	OR52N4	ENST00000317254	human	ensembl	74_37	+1	known	missense	c.788	p.S263Y	0.079	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52N4	HGNC	ENSG00000181074	tier1	-	-	99	0	0.00	70	13	15.66
OXSM	0	genome.wustl.edu	37	3	25835766	25835766	+	Frame_Shift_Del	DEL	G	G	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	3	25835766	25835766	G	-	DEL	OXSM	ENST00000280701	human	ensembl	74_37	+1	known	frame_shift_del	c.1161	p.G388fs	1.000	pfam_Ketoacyl_synth_C,superfamily_Thiolase-like,smart_PKS_Beta-ketoAc_synthase_dom,tigrfam_3-oxoacyl-ACP_synth-2	pfam_Ketoacyl_synth_N,pfam_Ketoacyl_synth_C,pfam_Thiolase_N,superfamily_Thiolase-like,smart_PKS_Beta-ketoAc_synthase_dom,tigrfam_3-oxoacyl-ACP_synth-2	-	no_errors	OXSM	HGNC	ENSG00000151093	tier1			63	0	0.00	47	8	14.55
PCDHGA6	0	genome.wustl.edu	37	5	140755021	140755021	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	5	140755021	140755021	C	A	SNP	PCDHGA6	ENST00000517434	human	ensembl	74_37	+1	known	nonsense	c.1371	p.Y457*	0.064	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA6	HGNC	ENSG00000253731	tier1	-	-	106	0	0.00	97	8	7.62
PCDHGB3	0	genome.wustl.edu	37	5	140751305	140751305	+	Silent	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	5	140751305	140751305	C	T	SNP	PCDHGB3	ENST00000576222	human	ensembl	74_37	+1	known	silent	c.1344	p.N448	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	tier1	-	-	150	0	0.00	121	23	15.97
PDZRN4	0	genome.wustl.edu	37	12	41900351	41900351	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	12	41900351	41900351	C	T	SNP	PDZRN4	ENST00000402685	human	ensembl	74_37	+1	known	nonsense	c.937	p.R313*	0.999	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	PDZRN4	HGNC	ENSG00000165966	tier1	-	-	40	0	0.00	40	8	16.67
PGC	0	genome.wustl.edu	37	6	41705512	41705514	+	In_Frame_Del	DEL	TGA	TGA	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	TGA	TGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	6	41705512	41705514	TGA	-	DEL	PGC	ENST00000373025	human	ensembl	74_37	-1	known	in_frame_del	c.970_968	p.I323in_frame_del	0.997:1.000:1.000	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	PGC	HGNC	ENSG00000096088	tier1			32	0	0.00	24	6	20.00
PNPLA5	0	genome.wustl.edu	37	22	44285693	44285694	+	Frame_Shift_Ins	INS	-	-	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	22	44285693	44285694	-	G	INS	PNPLA5	ENST00000216177	human	ensembl	74_37	-1	known	frame_shift_ins	c.478_477	p.E159fs	0.000:0.000	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA5	HGNC	ENSG00000100341	tier1			14	0	0.00	11	3	21.43
POM121	0	genome.wustl.edu	37	7	72413625	72413625	+	Silent	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	7	72413625	72413625	C	T	SNP	POM121	ENST00000434423	human	ensembl	74_37	+1	known	silent	c.3093	p.G1031	0.006	NULL	NULL	-	no_errors	POM121	HGNC	ENSG00000196313				80	0	0.00	59	4	6.35
PRR5L	0	genome.wustl.edu	37	11	36422780	36422780	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	11	36422780	36422780	C	T	SNP	PRR5L	ENST00000378867	human	ensembl	74_37	+1	known	nonsense	c.109	p.R37*	0.996	NULL	pfam_HbrB	-	no_errors	PRR5L	HGNC	ENSG00000135362	tier1	-	-	38	0	0.00	39	7	15.22
PTCHD3	0	genome.wustl.edu	37	10	27703027	27703027	+	Silent	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	10	27703027	27703027	C	T	SNP	PTCHD3	ENST00000438700	human	ensembl	74_37	-1	known	silent	c.153	p.P51	0.000	NULL	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077	tier1	-	-	122	0	0.00	93	17	15.45
RAB19	0	genome.wustl.edu	37	7	140111699	140111699	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	7	140111699	140111699	A	G	SNP	RAB19	ENST00000275874	human	ensembl	74_37	+1	known	missense	c.368	p.Q123R	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB19	HGNC	ENSG00000146955	tier1	-	-	56	0	0.00	26	8	23.53
RBM48	0	genome.wustl.edu	37	7	92163998	92163998	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	7	92163998	92163998	T	C	SNP	RBM48	ENST00000265732	human	ensembl	74_37	+1	known	missense	c.731	p.L244S	0.015	NULL	NULL	-	no_errors	RBM48	HGNC	ENSG00000127993	tier1	-	-	62	0	0.00	49	6	10.91
RCN2	0	genome.wustl.edu	37	15	77239853	77239853	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	15	77239853	77239853	A	G	SNP	RCN2	ENST00000394885	human	ensembl	74_37	+1	known	missense	c.653	p.D218G	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	RCN2	HGNC	ENSG00000117906	tier1	-	-	31	0	0.00	32	7	17.95
RFWD2	0	genome.wustl.edu	37	1	175996733	175996733	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	1	175996733	175996733	T	G	SNP	RFWD2	ENST00000367669	human	ensembl	74_37	-1	known	missense	c.1704	p.R568S	0.996	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,superfamily_WD40_repeat_dom,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RFWD2	HGNC	ENSG00000143207	tier1	-	-	60	0	0.00	60	6	9.09
RIPK2	0	genome.wustl.edu	37	8	90782093	90782093	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	8	90782093	90782093	A	C	SNP	RIPK2	ENST00000220751	human	ensembl	74_37	+1	known	missense	c.577	p.M193L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Rcpt-int_Ser/Thr_kinase-2,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CARD,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Rcpt-int_Ser/Thr_kinase-2,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_CARD,pfscan_Prot_kinase_dom	-	no_errors	RIPK2	HGNC	ENSG00000104312	tier1	-	-	115	0	0.00	108	39	26.53
SH2D4B	0	genome.wustl.edu	37	10	82330007	82330007	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	10	82330007	82330007	G	C	SNP	SH2D4B	ENST00000470604	human	ensembl	74_37	+1	known	missense	c.279	p.E93D	0.984	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SH2D4B	HGNC	ENSG00000178217	tier1	-	-	50	0	0.00	63	13	17.11
SLC3A2	0	genome.wustl.edu	37	11	62652677	62652677	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	11	62652677	62652677	G	A	SNP	SLC3A2	ENST00000377892	human	ensembl	74_37	+1	known	missense	c.1243	p.D415N	0.713	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	-	no_errors	SLC3A2	HGNC	ENSG00000168003	tier1	-	-	73	0	0.00	70	5	6.67
SLITRK1	0	genome.wustl.edu	37	13	84455149	84455149	+	Missense_Mutation	SNP	A	A	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	13	84455149	84455149	A	C	SNP	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	missense	c.494	p.L165R	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235	tier1	-	-	90	0	0.00	107	17	13.49
SPEF2	0	genome.wustl.edu	37	5	35705894	35705894	+	Frame_Shift_Del	DEL	A	A	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	5	35705894	35705894	A	-	DEL	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	frame_shift_del	c.2649	p.K886fs	0.129	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582	tier1			31	0	0.00	30	3	9.09
SSH2	0	genome.wustl.edu	37	17	27958230	27958230	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	17	27958230	27958230	C	T	SNP	SSH2	ENST00000269033	human	ensembl	74_37	-1	known	missense	c.3901	p.A1301T	0.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH2	HGNC	ENSG00000141298	tier1	-	-	74	0	0.00	46	6	11.54
TAF6L	0	genome.wustl.edu	37	11	62554693	62554693	+	Silent	SNP	G	G	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	11	62554693	62554693	G	C	SNP	TAF6L	ENST00000294168	human	ensembl	74_37	+1	known	silent	c.1794	p.L598	1.000	NULL	pfam_TAF_TATA-bd,pfam_DUF1546,superfamily_Histone-fold,smart_TAF_TATA-bd	-	no_errors	TAF6L	HGNC	ENSG00000162227	tier1	-	-	9	0	0.00	13	5	27.78
TEX30	0	genome.wustl.edu	37	13	103418791	103418791	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	13	103418791	103418791	C	G	SNP	TEX30	ENST00000376032	human	ensembl	74_37	-1	known	missense	c.644	p.W215S	1.000	NULL	pfam_Dienelactn_hydro	-	no_errors	TEX30	HGNC	ENSG00000151287	tier1	-	-	53	0	0.00	43	5	10.42
THBS4	0	genome.wustl.edu	37	5	79375728	79375728	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	5	79375728	79375728	G	A	SNP	THBS4	ENST00000350881	human	ensembl	74_37	+1	known	missense	c.2512	p.A838T	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS4	HGNC	ENSG00000113296	tier1	-	-	43	0	0.00	30	6	16.67
THSD1	0	genome.wustl.edu	37	13	52971375	52971375	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	13	52971375	52971375	C	G	SNP	THSD1	ENST00000258613	human	ensembl	74_37	-1	known	missense	c.1013	p.R338T	1.000	superfamily_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD1	HGNC	ENSG00000136114	tier1	-	-	44	0	0.00	61	22	26.51
TRAK2	0	genome.wustl.edu	37	2	202252596	202252596	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	2	202252596	202252596	C	T	SNP	TRAK2	ENST00000332624	human	ensembl	74_37	-1	known	missense	c.1526	p.R509Q	1.000	pfam_Traffickng_kinesin-bd_prot_dom	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK2	HGNC	ENSG00000115993	tier1	rs144404050	-	74	0	0.00	77	11	12.50
U2AF1L4	0	genome.wustl.edu	37	19	36236323	36236323	+	RNA	DEL	C	C	-			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	19	36236323	36236323	C	-	DEL	U2AF1L4	ENST00000588100	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	U2AF1L4	HGNC	ENSG00000161265	tier1			59	0	0.00	38	6	13.64
USP54	0	genome.wustl.edu	37	10	75265146	75265146	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	10	75265146	75265146	G	A	SNP	USP54	ENST00000339859	human	ensembl	74_37	-1	known	missense	c.4090	p.H1364Y	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348	tier1	-	-	55	0	0.00	67	6	8.11
ZDBF2	0	genome.wustl.edu	37	2	207173829	207173829	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	2	207173829	207173829	T	C	SNP	ZDBF2	ENST00000374423	human	ensembl	74_37	+1	known	missense	c.4577	p.V1526A	0.029	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186	tier1	-	-	44	0	0.00	27	6	18.18
ZNF112	0	genome.wustl.edu	37	19	44833415	44833415	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	19	44833415	44833415	G	T	SNP	ZNF112	ENST00000536500	human	ensembl	74_37	-1	known	missense	c.964	p.Q322K	1.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF112	HGNC	ENSG00000062370	tier1	-	-	61	0	0.00	60	9	13.04
ZNF534	0	genome.wustl.edu	37	19	52937309	52937309	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8MV-01A-11D-A364-08	TCGA-RD-A8MV-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4a6d7c66-3980-4a68-9e95-12a98d4c2477	b87e0fd6-bf15-4664-ad06-11f1a47cfac4	19	52937309	52937309	G	T	SNP	ZNF534	ENST00000332323	human	ensembl	74_37	+1	known	missense	c.117	p.E39D	0.750	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF534	HGNC	ENSG00000198633	tier1	-	-	68	0	0.00	79	10	11.24
