Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABL2	0	genome.wustl.edu	37	1	179078016	179078016	+	Frame_Shift_Del	DEL	T	T	-			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	179078016	179078016	T	-	DEL	ABL2	ENST00000502732	human	ensembl	74_37	-1	known	frame_shift_del	c.2386	p.R796fs	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_F-actin_binding,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,pfam_SH3-like_bac-type,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL2	HGNC	ENSG00000143322	tier1			61	0	0.00	64	14	17.95
ACPT	0	genome.wustl.edu	37	19	51294975	51294975	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	51294975	51294975	G	A	SNP	ACPT	ENST00000270593	human	ensembl	74_37	+1	novel	silent	c.366	p.G122	0.997	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	ACPT	HGNC	ENSG00000142513	tier1	-	-	42	0	0.00	18	33	64.71
ADAM22	0	genome.wustl.edu	37	7	87757932	87757932	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	7	87757932	87757932	C	T	SNP	ADAM22	ENST00000265727	human	ensembl	74_37	+1	known	missense	c.694	p.R232C	1.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM22	HGNC	ENSG00000008277	tier1	-	-	106	0	0.00	73	41	35.96
ADAMTS7	0	genome.wustl.edu	37	15	79059020	79059021	+	Frame_Shift_Ins	INS	-	-	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	15	79059020	79059021	-	A	INS	ADAMTS7	ENST00000388820	human	ensembl	74_37	-1	known	frame_shift_ins	c.3233_3232	p.Y1078fs	0.032:0.024	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378	tier1			32	0	0.00	28	9	24.32
ALDH6A1	0	genome.wustl.edu	37	14	74538953	74538953	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	14	74538953	74538953	G	A	SNP	ALDH6A1	ENST00000553458	human	ensembl	74_37	-1	known	missense	c.301	p.R101C	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_MeMal-semiAld_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_MeMal-semiAld_DH	-	no_errors	ALDH6A1	HGNC	ENSG00000119711	tier1	-	-	60	0	0.00	65	21	24.42
AMACR	0	genome.wustl.edu	37	5	34005964	34005964	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	5	34005964	34005964	C	G	SNP	AMACR	ENST00000335606	human	ensembl	74_37	-1	known	missense	c.288	p.Q96H	0.014	pfam_CoA-Trfase_fam_III,superfamily_CoA-Trfase_III_dom	pfam_CoA-Trfase_fam_III,superfamily_CoA-Trfase_III_dom	-	no_errors	AMACR	HGNC	ENSG00000242110	tier1	-	-	81	0	0.00	139	24	14.72
ANTXR1	0	genome.wustl.edu	37	2	69350194	69350194	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	69350194	69350194	C	A	SNP	ANTXR1	ENST00000303714	human	ensembl	74_37	+1	known	missense	c.848	p.A283E	0.995	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_extracel	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_extracel,pfam_Anthrax_toxin_rcpt_C,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR1	HGNC	ENSG00000169604	tier1	-	-	104	0	0.00	117	20	14.60
ARHGEF4	0	genome.wustl.edu	37	2	131704217	131704217	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	131704217	131704217	C	T	SNP	ARHGEF4	ENST00000409359	human	ensembl	74_37	+1	putative	missense	c.3004	p.R1002C	0.000	NULL	NULL	-	no_errors	ARHGEF4	HGNC	ENSG00000136002	tier1	-	-	69	0	0.00	49	38	43.68
ASNA1	0	genome.wustl.edu	37	19	12858230	12858230	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	12858230	12858230	G	A	SNP	ASNA1	ENST00000357332	human	ensembl	74_37	+1	known	missense	c.739	p.V247I	1.000	pfam_Anion-transp_ATPase-like_dom,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,superfamily_P-loop_NTPase,tigrfam_ATPase_ArsA/GET3	pfam_Anion-transp_ATPase-like_dom,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,superfamily_P-loop_NTPase,tigrfam_ATPase_ArsA/GET3	-	no_errors	ASNA1	HGNC	ENSG00000198356	tier1	-	-	60	0	0.00	49	15	23.44
ATP7B	0	genome.wustl.edu	37	13	52532476	52532476	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	13	52532476	52532476	G	A	SNP	ATP7B	ENST00000242839	human	ensembl	74_37	-1	known	silent	c.2326	p.L776	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_Cation_transp_P_typ_ATPase,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7B	HGNC	ENSG00000123191	tier1	-	-	49	0	0.00	45	35	43.75
AXIN2	0	genome.wustl.edu	37	17	63532501	63532501	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	17	63532501	63532501	G	A	SNP	AXIN2	ENST00000307078	human	ensembl	74_37	-1	known	missense	c.2078	p.T693M	1.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN2	HGNC	ENSG00000168646	tier1	-	-	23	0	0.00	15	10	40.00
C16orf11	0	genome.wustl.edu	37	16	615155	615155	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	615155	615155	G	A	SNP	C16orf11	ENST00000409413	human	ensembl	74_37	+1	known	missense	c.1564	p.D522N	1.000	NULL	NULL	-	no_errors	C16orf11	HGNC	ENSG00000161992	tier1	-	-	50	0	0.00	34	15	30.61
C1orf112	0	genome.wustl.edu	37	1	169822830	169822830	+	RNA	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	169822830	169822830	C	G	SNP	C1orf112	ENST00000459772	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.086	-	-	-	no_errors	C1orf112	HGNC	ENSG00000000460	tier1	-	-	121	0	0.00	140	22	13.58
CACNA1C	0	genome.wustl.edu	37	12	2719829	2719829	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	2719829	2719829	C	T	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	silent	c.3681	p.V1227	0.998	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067	tier1	-	-	46	0	0.00	71	10	12.35
CALHM1	0	genome.wustl.edu	37	10	105218333	105218333	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	105218333	105218333	G	A	SNP	CALHM1	ENST00000329905	human	ensembl	74_37	-1	known	missense	c.176	p.A59V	0.998	NULL	NULL	-	no_errors	CALHM1	HGNC	ENSG00000185933	tier1	-	-	54	0	0.00	28	8	21.62
CBFA2T2	0	genome.wustl.edu	37	20	32224499	32224499	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	20	32224499	32224499	T	A	SNP	CBFA2T2	ENST00000346541	human	ensembl	74_37	+1	known	missense	c.1309	p.F437I	1.000	NULL	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTGR1	-	no_errors	CBFA2T2	HGNC	ENSG00000078699	tier1	-	-	106	0	0.00	193	21	9.81
CD163	0	genome.wustl.edu	37	12	7632521	7632521	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	7632521	7632521	C	A	SNP	CD163	ENST00000359156	human	ensembl	74_37	-1	known	nonsense	c.3415	p.G1139*	0.383	NULL	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	CD163	HGNC	ENSG00000177575	tier1	-	-	52	0	0.00	59	9	13.24
CDC42BPG	0	genome.wustl.edu	37	11	64603002	64603002	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	64603002	64603002	C	A	SNP	CDC42BPG	ENST00000342711	human	ensembl	74_37	-1	known	missense	c.1850	p.R617L	0.000	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219	tier1	-	-	57	0	0.00	74	5	6.33
CDCA8	0	genome.wustl.edu	37	1	38171191	38171193	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	38171191	38171193	TGC	-	DEL	CDCA8	ENST00000327331	human	ensembl	74_37	+1	known	in_frame_del	c.663_665	p.A222in_frame_del	0.526:0.993:0.997	pfam_Cell_div_borealin	pfam_Cell_div_borealin,pfam_Borealin-like_N	-	no_errors	CDCA8	HGNC	ENSG00000134690	tier1			65	0	0.00	46	8	14.81
CDK5RAP3	0	genome.wustl.edu	37	17	46058871	46058871	+	RNA	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	17	46058871	46058871	C	A	SNP	CDK5RAP3	ENST00000578663	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CDK5RAP3	HGNC	ENSG00000108465	tier1	-	-	47	0	0.00	45	19	29.69
CES1	0	genome.wustl.edu	37	16	55844441	55844441	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	55844441	55844441	G	A	SNP	CES1	ENST00000360526	human	ensembl	74_37	-1	known	missense	c.1306	p.R436W	0.047	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES1	HGNC	ENSG00000198848	tier1	-	-	126	0	0.00	114	39	25.32
CHRNE	0	genome.wustl.edu	37	17	4805288	4805288	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	17	4805288	4805288	C	T	SNP	CHRNE	ENST00000293780	human	ensembl	74_37	-1	known	missense	c.439	p.V147I	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNE	HGNC	ENSG00000108556	tier1	-	-	60	0	0.00	47	8	14.55
CHST1	0	genome.wustl.edu	37	11	45671862	45671862	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	45671862	45671862	G	A	SNP	CHST1	ENST00000308064	human	ensembl	74_37	-1	known	silent	c.612	p.A204	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST1	HGNC	ENSG00000175264	tier1	-	-	34	0	0.00	81	19	19.00
COL11A1	0	genome.wustl.edu	37	1	103461563	103461563	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	103461563	103461563	C	T	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	silent	c.2313	p.P771	0.995	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	92	0	0.00	73	16	17.98
COL12A1	0	genome.wustl.edu	37	6	75801105	75801105	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	75801105	75801105	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.8686	p.G2896R	1.000	pfam_Collagen	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	70	0	0.00	60	29	32.58
COL5A1	0	genome.wustl.edu	37	9	137688741	137688741	+	Frame_Shift_Del	DEL	C	C	-			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	9	137688741	137688741	C	-	DEL	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	frame_shift_del	c.2892	p.P966fs	0.999	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635	tier1			58	0	0.00	33	10	23.26
CRYBB3	0	genome.wustl.edu	37	22	25601265	25601265	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	22	25601265	25601265	G	A	SNP	CRYBB3	ENST00000215855	human	ensembl	74_37	+1	known	missense	c.406	p.V136M	1.000	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBB3	HGNC	ENSG00000100053	tier1	-	-	33	0	0.00	26	19	42.22
CSPG4	0	genome.wustl.edu	37	15	75982642	75982642	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	15	75982642	75982642	A	G	SNP	CSPG4	ENST00000308508	human	ensembl	74_37	-1	known	missense	c.764	p.I255T	0.900	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	-	no_errors	CSPG4	HGNC	ENSG00000173546	tier1	-	-	30	0	0.00	23	4	14.81
CTNNA3	0	genome.wustl.edu	37	10	67680207	67680208	+	Frame_Shift_Ins	INS	-	-	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	67680207	67680208	-	T	INS	CTNNA3	ENST00000373744	human	ensembl	74_37	-1	known	frame_shift_ins	c.2569_2568	p.P856fs	1.000:0.996	pfam_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA3	HGNC	ENSG00000183230	tier1			87	0	0.00	65	14	17.72
CUL9	0	genome.wustl.edu	37	6	43173003	43173003	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	43173003	43173003	G	A	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	missense	c.4635	p.M1545I	1.000	pfam_Cullin_N,superfamily_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659	tier1	-	-	190	0	0.00	186	10	5.10
CYP2U1	0	genome.wustl.edu	37	4	108866479	108866479	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	4	108866479	108866479	G	C	SNP	CYP2U1	ENST00000332884	human	ensembl	74_37	+1	known	missense	c.844	p.G282R	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I_CYP2D-like	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B,prints_Cyt_P450_E_grp-I_CYP2D-like	-	no_errors	CYP2U1	HGNC	ENSG00000155016	tier1	-	-	65	0	0.00	72	11	13.25
DAB1	0	genome.wustl.edu	37	1	57602304	57602304	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	57602304	57602304	G	T	SNP	DAB1	ENST00000371231	human	ensembl	74_37	-1	known	missense	c.218	p.A73D	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	DAB1	HGNC	ENSG00000173406	tier1	-	-	62	0	0.00	50	6	10.71
DCAF12L1	0	genome.wustl.edu	37	X	125686209	125686209	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	125686209	125686209	C	T	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.383	p.G128D	0.014	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889	tier1	-	-	72	0	0.00	39	22	36.07
DDI2	0	genome.wustl.edu	37	1	15956924	15956924	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	15956924	15956924	A	G	SNP	DDI2	ENST00000480945	human	ensembl	74_37	+1	known	missense	c.373	p.I125V	0.000	NULL	pfam_Peptidase_aspartic_DDI1-type,pfam_RVP_2,pfam_Pept_A2A_retrovirus_sg,pfam_Ubiquitin_dom,superfamily_Peptidase_aspartic_dom,pfscan_Ubiquitin_supergroup	-	no_errors	DDI2	HGNC	ENSG00000197312	tier1	-	-	72	0	0.00	74	23	23.71
DHX35	0	genome.wustl.edu	37	20	37620129	37620129	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	20	37620129	37620129	G	T	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	missense	c.483	p.M161I	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX35	HGNC	ENSG00000101452	tier1	-	-	55	0	0.00	110	11	9.09
DLL4	0	genome.wustl.edu	37	15	41228736	41228736	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	15	41228736	41228736	C	T	SNP	DLL4	ENST00000249749	human	ensembl	74_37	+1	known	silent	c.1551	p.C517	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,superfamily_Growth_fac_rcpt_N_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL4	HGNC	ENSG00000128917	tier1	-	-	13	0	0.00	3	7	70.00
DNAH8	0	genome.wustl.edu	37	6	38810490	38810490	+	Silent	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	38810490	38810490	C	G	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	silent	c.4005	p.L1335	0.895	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1	-	-	82	0	0.00	69	6	8.00
DOCK7	0	genome.wustl.edu	37	1	63084381	63084381	+	Frame_Shift_Del	DEL	A	A	-			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	63084381	63084381	A	-	DEL	DOCK7	ENST00000251157	human	ensembl	74_37	-1	known	frame_shift_del	c.1678	p.Y560fs	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK7	HGNC	ENSG00000116641	tier1			77	0	0.00	53	14	20.90
DUSP9	0	genome.wustl.edu	37	X	152915606	152915607	+	Frame_Shift_Ins	INS	-	-	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	152915606	152915607	-	G	INS	DUSP9	ENST00000342782	human	ensembl	74_37	+1	known	frame_shift_ins	c.1001_1002	p.Q336fs	1.000:1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP9	HGNC	ENSG00000130829	tier1			240	0	0.00	142	36	20.22
DUSP9	0	genome.wustl.edu	37	X	152915610	152915610	+	Silent	SNP	G	G	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	152915610	152915610	G	C	SNP	DUSP9	ENST00000342782	human	ensembl	74_37	+1	known	silent	c.1005	p.G335	0.998	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP9	HGNC	ENSG00000130829	tier1	-	-	222	0	0.00	117	53	31.18
EIF2AK2	0	genome.wustl.edu	37	2	37362652	37362652	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	37362652	37362652	C	T	SNP	EIF2AK2	ENST00000233057	human	ensembl	74_37	-1	known	missense	c.760	p.E254K	0.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_dsRNA-bd_dom,superfamily_Kinase-like_dom,smart_dsRNA-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_dsRNA-bd_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EIF2AK2	HGNC	ENSG00000055332	tier1	-	-	122	0	0.00	102	30	22.56
ELANE	0	genome.wustl.edu	37	19	852345	852345	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	852345	852345	G	A	SNP	ELANE	ENST00000263621	human	ensembl	74_37	+1	known	missense	c.17	p.R6Q	0.001	NULL	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	ELANE	HGNC	ENSG00000197561	tier1	-	-	26	0	0.00	14	12	46.15
ELMOD1	0	genome.wustl.edu	37	11	107501189	107501189	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	107501189	107501189	C	T	SNP	ELMOD1	ENST00000265840	human	ensembl	74_37	+1	known	missense	c.64	p.R22C	1.000	NULL	pfam_Engulfment_cell_motility_ELMO	-	no_errors	ELMOD1	HGNC	ENSG00000110675	tier1	rs201382091	-	15	0	0.00	13	5	27.78
EMP1	0	genome.wustl.edu	37	12	13367542	13367542	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	13367542	13367542	G	A	SNP	EMP1	ENST00000256951	human	ensembl	74_37	+1	known	missense	c.391	p.G131S	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_PMP22_EMP_MP20,prints_EMP_1	-	no_errors	EMP1	HGNC	ENSG00000134531	tier1	rs35705378	-	116	0	0.00	114	56	32.94
ENSG00000212884	0	genome.wustl.edu	37	GL000205.1	117785	117785	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	GL000205.1	117785	117785	C	A	SNP	ENSG00000212884	ENST00000391571	human	ensembl	74_37	+1	known	missense	c.416	p.A139E	NULL	NULL	pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	AC011841.1	Clone_based_ensembl_gene	ENSG00000212884	tier1	-	-	60	0	0.00	56	16	22.22
ENSG00000233739	0	genome.wustl.edu	37	22	38469919	38469919	+	RNA	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	22	38469919	38469919	C	T	SNP	ENSG00000233739	ENST00000445483	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-1039K5.13	Clone_based_vega_gene	ENSG00000233739	tier1	-	-	18	0	0.00	13	6	31.58
ENSG00000243349	0	genome.wustl.edu	37	10	45642902	45642902	+	RNA	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	45642902	45642902	C	G	SNP	ENSG00000243349	ENST00000427229	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.280	-	-	-	no_errors	RP11-445N18.7	Clone_based_vega_gene	ENSG00000243349	tier1	-	-	39	0	0.00	24	6	20.00
ENSG00000255470	0	genome.wustl.edu	37	11	18210819	18210819	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	18210819	18210819	G	A	SNP	ENSG00000255470	ENST00000527671	human	ensembl	74_37	-1	novel	silent	c.99	p.S33	0.989	NULL	NULL	-	no_errors	RP11-113D6.6	Clone_based_vega_gene	ENSG00000255470	tier1	-	-	21	0	0.00	25	9	26.47
FAT3	0	genome.wustl.edu	37	11	92564949	92564950	+	Frame_Shift_Ins	INS	-	-	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	92564949	92564950	-	C	INS	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	frame_shift_ins	c.9643_9644	p.L3216fs	0.104:0.155	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1			26	0	0.00	16	6	27.27
FERMT1	0	genome.wustl.edu	37	20	6057066	6057066	+	RNA	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	20	6057066	6057066	C	A	SNP	FERMT1	ENST00000478194	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FERMT1	HGNC	ENSG00000101311	tier1	-	-	20	0	0.00	28	9	24.32
FLG	0	genome.wustl.edu	37	1	152277526	152277526	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	152277526	152277526	G	C	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.9836	p.A3279G	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	428	0	0.00	471	97	17.08
FOXC2	0	genome.wustl.edu	37	16	86601239	86601239	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	86601239	86601239	C	T	SNP	FOXC2	ENST00000320354	human	ensembl	74_37	+1	known	nonsense	c.298	p.Q100*	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXC2	HGNC	ENSG00000176692	tier1	-	-	66	0	0.00	44	26	37.14
FRK	0	genome.wustl.edu	37	6	116381464	116381464	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	116381464	116381464	A	G	SNP	FRK	ENST00000606080	human	ensembl	74_37	-1	known	missense	c.11	p.I4T	0.001	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FRK	HGNC	ENSG00000111816	tier1	-	-	52	0	0.00	41	36	46.75
FZD6	0	genome.wustl.edu	37	8	104336873	104336873	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	8	104336873	104336873	A	T	SNP	FZD6	ENST00000358755	human	ensembl	74_37	+1	known	missense	c.539	p.Q180L	1.000	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD6	HGNC	ENSG00000164930	tier1	-	-	72	0	0.00	64	38	37.25
GALR1	0	genome.wustl.edu	37	18	74962958	74962958	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	18	74962958	74962958	G	A	SNP	GALR1	ENST00000299727	human	ensembl	74_37	+1	known	missense	c.454	p.A152T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Galanin_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GAL1_rcpt,prints_GPCR_Rhodpsn,prints_Galanin_rcpt,prints_NPY_rcpt	-	no_errors	GALR1	HGNC	ENSG00000166573	tier1	-	-	35	0	0.00	18	20	52.63
GGT5	0	genome.wustl.edu	37	22	24621553	24621553	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	22	24621553	24621553	C	T	SNP	GGT5	ENST00000398292	human	ensembl	74_37	-1	known	missense	c.1297	p.E433K	0.986	pfam_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGT5	HGNC	ENSG00000099998	tier1	-	-	19	0	0.00	15	9	37.50
GINM1	0	genome.wustl.edu	37	6	149903626	149903626	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	149903626	149903626	G	A	SNP	GINM1	ENST00000367419	human	ensembl	74_37	+1	known	nonsense	c.768	p.W256*	1.000	NULL	NULL	-	no_errors	GINM1	HGNC	ENSG00000055211	tier1	-	-	147	0	0.00	108	23	17.56
GPHN	0	genome.wustl.edu	37	14	67578617	67578617	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	14	67578617	67578617	C	T	SNP	GPHN	ENST00000478722	human	ensembl	74_37	+1	known	missense	c.1453	p.R485W	1.000	pfam_MoeA_linker/N,superfamily_MoeA_linker/N	pfam_Mopterin-bd_dom,pfam_MoeA_linker/N,pfam_MoeA_C_domain_IV,superfamily_MoeA_linker/N,superfamily_Mopterin-bd_dom,superfamily_MoeA_C_domain_IV,smart_Mopterin-bd_dom,tigrfam_Mo_cofactor_synthesis	-	no_errors	GPHN	HGNC	ENSG00000171723	tier1	-	-	57	0	0.00	35	9	20.45
GPR45	0	genome.wustl.edu	37	2	105858503	105858503	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	105858503	105858503	C	T	SNP	GPR45	ENST00000258456	human	ensembl	74_37	+1	known	missense	c.188	p.P63L	0.996	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR45	HGNC	ENSG00000135973	tier1	-	-	84	0	0.00	84	26	23.64
GPR56	0	genome.wustl.edu	37	16	57695840	57695840	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	57695840	57695840	C	T	SNP	GPR56	ENST00000379696	human	ensembl	74_37	+1	known	silent	c.1914	p.V638	0.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,prints_GPCR_2_orphan_rcpt_GPR56,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR56	HGNC	ENSG00000205336	tier1	-	-	43	0	0.00	27	21	43.75
GRB14	0	genome.wustl.edu	37	2	165404265	165404265	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	165404265	165404265	G	A	SNP	GRB14	ENST00000263915	human	ensembl	74_37	-1	known	missense	c.386	p.T129M	0.993	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB14	HGNC	ENSG00000115290	tier1	-	-	59	0	0.00	20	46	69.70
GRIK3	0	genome.wustl.edu	37	1	37315908	37315908	+	RNA	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	37315908	37315908	T	C	SNP	GRIK3	ENST00000479620	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRIK3	HGNC	ENSG00000163873	tier1	-	-	64	0	0.00	29	27	48.21
GRM6	0	genome.wustl.edu	37	5	178413301	178413301	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	5	178413301	178413301	C	T	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	missense	c.1954	p.A652T	0.011	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262	tier1	rs150850494	-	23	0	0.00	11	12	52.17
HERC2	0	genome.wustl.edu	37	15	28443585	28443585	+	Silent	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	15	28443585	28443585	A	G	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	silent	c.7950	p.S2650	0.401	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	tier1	-	-	98	0	0.00	78	12	13.33
HFM1	0	genome.wustl.edu	37	1	91816302	91816302	+	Silent	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	91816302	91816302	A	G	SNP	HFM1	ENST00000370425	human	ensembl	74_37	-1	known	silent	c.2199	p.S733	1.000	NULL	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HFM1	HGNC	ENSG00000162669	tier1	-	-	53	0	0.00	37	33	47.14
HGS	0	genome.wustl.edu	37	17	79652704	79652704	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	17	79652704	79652704	G	T	SNP	HGS	ENST00000329138	human	ensembl	74_37	+1	known	missense	c.107	p.R36L	1.000	pfam_VHS,superfamily_ENTH_VHS,smart_VHS_subgr,pirsf_Ubi-bd_Hrs_VPS27,pfscan_VHS	pfam_VHS,pfam_HRS_helical,pfam_Znf_FYVE,superfamily_ENTH_VHS,superfamily_Znf_FYVE_PHD,smart_VHS_subgr,smart_Znf_FYVE,pirsf_Ubi-bd_Hrs_VPS27,pfscan_Ubiquitin-int_motif,pfscan_VHS,pfscan_Znf_FYVE-rel	-	no_errors	HGS	HGNC	ENSG00000185359	tier1	-	-	54	0	0.00	36	18	33.33
HPR	0	genome.wustl.edu	37	16	72108257	72108257	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	72108257	72108257	T	A	SNP	HPR	ENST00000228226	human	ensembl	74_37	+1	known	missense	c.277	p.Y93N	0.036	pirsf_Haptoglobin,superfamily_Sushi_SCR_CCP	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	HPR	HGNC	ENSG00000261701	tier1	-	-	62	0	0.00	29	28	49.12
HTR3C	0	genome.wustl.edu	37	3	183774681	183774681	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	3	183774681	183774681	G	A	SNP	HTR3C	ENST00000318351	human	ensembl	74_37	+1	known	silent	c.408	p.T136	0.008	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Neur_channel	-	no_errors	HTR3C	HGNC	ENSG00000178084	tier1	-	-	95	0	0.00	89	39	30.47
IARS2	0	genome.wustl.edu	37	1	220275603	220275604	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	220275603	220275604	AC	-	DEL	IARS2	ENST00000302637	human	ensembl	74_37	+1	known	frame_shift_del	c.683_684	p.Y228fs	1.000:1.000	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Ile-tRNA-ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_Znf_DNA_glyclase/IsotRNA_synth,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,prints_Ile-tRNA-ligase,tigrfam_Ile-tRNA-ligase	-	no_errors	IARS2	HGNC	ENSG00000067704	tier1			118	0	0.00	120	17	12.41
ICK	0	genome.wustl.edu	37	6	52897372	52897372	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	52897372	52897372	G	A	SNP	ICK	ENST00000350082	human	ensembl	74_37	-1	known	silent	c.237	p.F79	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ICK	HGNC	ENSG00000112144	tier1	-	-	23	0	0.00	27	9	25.00
IL16	0	genome.wustl.edu	37	15	81584950	81584950	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	15	81584950	81584950	C	T	SNP	IL16	ENST00000302987	human	ensembl	74_37	+1	known	nonsense	c.1474	p.R492*	0.003	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_IL-16	-	no_errors	IL16	HGNC	ENSG00000172349	tier1	-	-	38	0	0.00	26	18	40.91
ITGA11	0	genome.wustl.edu	37	15	68649513	68649513	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	15	68649513	68649513	G	A	SNP	ITGA11	ENST00000315757	human	ensembl	74_37	-1	known	missense	c.725	p.T242M	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809	tier1	-	-	50	0	0.00	24	9	27.27
ITGB2	0	genome.wustl.edu	37	21	46320324	46320324	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	21	46320324	46320324	C	T	SNP	ITGB2	ENST00000302347	human	ensembl	74_37	-1	known	missense	c.808	p.A270T	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_tail,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB2	HGNC	ENSG00000160255	tier1	rs148775158	-	55	0	0.00	42	5	10.64
KCTD19	0	genome.wustl.edu	37	16	67329221	67329221	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	67329221	67329221	G	A	SNP	KCTD19	ENST00000304372	human	ensembl	74_37	-1	known	nonsense	c.1336	p.R446*	1.000	superfamily_BTB/POZ_fold	pfam_T1-type_BTB,superfamily_BTB/POZ_fold	-	no_errors	KCTD19	HGNC	ENSG00000168676	tier1	-	-	23	0	0.00	13	18	58.06
KDM5B	0	genome.wustl.edu	37	1	202710621	202710621	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	202710621	202710621	C	T	SNP	KDM5B	ENST00000367264	human	ensembl	74_37	-1	known	missense	c.2927	p.R976H	1.000	pfam_Lys_sp_deMease_like_dom	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5B	HGNC	ENSG00000117139	tier1	-	-	32	0	0.00	35	13	27.08
KIAA1033	0	genome.wustl.edu	37	12	105534783	105534783	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	105534783	105534783	G	A	SNP	KIAA1033	ENST00000332180	human	ensembl	74_37	+1	known	missense	c.1667	p.R556Q	1.000	NULL	NULL	-	no_errors	KIAA1033	HGNC	ENSG00000136051	tier1	-	-	147	0	0.00	56	86	60.56
KIAA1919	0	genome.wustl.edu	37	6	111588062	111588062	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	111588062	111588062	G	T	SNP	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	missense	c.1297	p.G433W	0.013	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214	tier1	-	-	40	0	0.00	36	7	16.28
KRT6B	0	genome.wustl.edu	37	12	52842677	52842677	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	52842677	52842677	G	A	SNP	KRT6B	ENST00000252252	human	ensembl	74_37	-1	known	silent	c.1152	p.I384	0.997	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6B	HGNC	ENSG00000185479				36	0	0.00	39	4	9.30
KRTAP4-8	0	genome.wustl.edu	37	17	39254054	39254054	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	17	39254054	39254054	A	T	SNP	KRTAP4-8	ENST00000333822	human	ensembl	74_37	-1	known	missense	c.283	p.C95S	0.992	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-8	HGNC	ENSG00000204880				33	0	0.00	45	7	13.46
LAMA3	0	genome.wustl.edu	37	18	21500903	21500903	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	18	21500903	21500903	G	A	SNP	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	missense	c.7928	p.R2643H	0.014	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Growth_fac_rcpt_N_dom,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747	tier1	-	-	42	0	0.00	70	6	7.89
LANCL2	0	genome.wustl.edu	37	7	55479697	55479697	+	Nonsense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	7	55479697	55479697	C	G	SNP	LANCL2	ENST00000254770	human	ensembl	74_37	+1	known	nonsense	c.923	p.S308*	0.997	pfam_LANC-like,superfamily_6-hairpin_glycosidase-like,prints_LanC-like_prot_euk	pfam_LANC-like,superfamily_6-hairpin_glycosidase-like,prints_LanC-like_prot_euk,prints_LANC-like	-	no_errors	LANCL2	HGNC	ENSG00000132434	tier1	-	-	69	0	0.00	108	9	7.69
LHCGR	0	genome.wustl.edu	37	2	48915121	48915121	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	48915121	48915121	T	G	SNP	LHCGR	ENST00000294954	human	ensembl	74_37	-1	known	missense	c.1815	p.K605N	1.000	pfam_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_LSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LHCGR	HGNC	ENSG00000138039	tier1	-	-	81	0	0.00	48	36	42.86
LPCAT3	0	genome.wustl.edu	37	12	7086590	7086590	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	7086590	7086590	C	G	SNP	LPCAT3	ENST00000261407	human	ensembl	74_37	-1	known	missense	c.1286	p.W429S	1.000	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	LPCAT3	HGNC	ENSG00000111684	tier1	-	-	38	0	0.00	49	11	18.33
LRIT2	0	genome.wustl.edu	37	10	85982204	85982204	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	85982204	85982204	C	T	SNP	LRIT2	ENST00000538192	human	ensembl	74_37	-1	known	silent	c.1155	p.V385	0.105	superfamily_Fibronectin_type3	pfam_Ig_I-set,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIT2	HGNC	ENSG00000204033	tier1	-	-	50	0	0.00	40	6	13.04
LRIT2	0	genome.wustl.edu	37	10	85985176	85985176	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	85985176	85985176	C	G	SNP	LRIT2	ENST00000538192	human	ensembl	74_37	-1	known	missense	c.101	p.S34T	0.015	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIT2	HGNC	ENSG00000204033	tier1	-	-	24	0	0.00	11	11	50.00
LRRTM1	0	genome.wustl.edu	37	2	80529510	80529510	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	80529510	80529510	G	A	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	nonsense	c.1435	p.Q479*	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951	tier1	-	-	61	0	0.00	59	6	9.23
MACF1	0	genome.wustl.edu	37	1	39927558	39927558	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	39927558	39927558	T	C	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	missense	c.15350	p.F5117S	1.000	pfscan_EF_hand_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	186	0	0.00	86	89	50.86
MAGEC1	0	genome.wustl.edu	37	X	140996473	140996473	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	140996473	140996473	G	A	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.3283	p.V1095I	0.000	pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	rs147835720	-	191	0	0.00	99	30	23.26
MCOLN3	0	genome.wustl.edu	37	1	85506725	85506725	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	85506725	85506725	C	G	SNP	MCOLN3	ENST00000370589	human	ensembl	74_37	-1	known	missense	c.364	p.V122L	1.000	NULL	pfam_PKD1_2_channel	-	no_errors	MCOLN3	HGNC	ENSG00000055732	tier1	-	-	111	0	0.00	94	15	13.76
MEIS1	0	genome.wustl.edu	37	2	66796231	66796231	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	66796231	66796231	C	G	SNP	MEIS1	ENST00000272369	human	ensembl	74_37	+1	known	missense	c.1164	p.H388Q	1.000	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	MEIS1	HGNC	ENSG00000143995	tier1	-	-	132	0	0.00	129	14	9.79
MELK	0	genome.wustl.edu	37	9	36677200	36677200	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	9	36677200	36677200	A	G	SNP	MELK	ENST00000298048	human	ensembl	74_37	+1	known	missense	c.1822	p.T608A	1.000	pfam_KA1_dom,superfamily_KA1/Ssp2_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MELK	HGNC	ENSG00000165304	tier1	-	-	106	0	0.00	74	15	16.85
MMP2	0	genome.wustl.edu	37	16	55522477	55522477	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	55522477	55522477	C	T	SNP	MMP2	ENST00000219070	human	ensembl	74_37	+1	known	silent	c.855	p.N285	0.486	pfam_Pept_M10_metallopeptidase,superfamily_Kringle-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP2	HGNC	ENSG00000087245	tier1	-	-	20	0	0.00	16	5	23.81
MMP25	0	genome.wustl.edu	37	16	3100528	3100528	+	Silent	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	3100528	3100528	C	G	SNP	MMP25	ENST00000336577	human	ensembl	74_37	+1	known	silent	c.642	p.T214	0.979	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP25	HGNC	ENSG00000008516	tier1	-	-	44	0	0.00	41	14	25.45
MPDZ	0	genome.wustl.edu	37	9	13205975	13205975	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	9	13205975	13205975	A	T	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.1414	p.S472T	0.000	superfamily_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	tier1	-	-	29	0	0.00	18	4	18.18
MTFR1	0	genome.wustl.edu	37	8	66594568	66594568	+	RNA	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	8	66594568	66594568	G	A	SNP	MTFR1	ENST00000522239	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MTFR1	HGNC	ENSG00000066855	tier1	-	-	36	0	0.00	32	7	17.95
MUC6	0	genome.wustl.edu	37	11	1017056	1017058	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	1017056	1017058	AGA	0	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	in_frame_del	c.5745_5743	p.S1915in_frame_del	0.006:0.010:0.004	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				663	0	0.00	627	46	6.84
NASP	0	genome.wustl.edu	37	1	46056902	46056902	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	46056902	46056902	G	C	SNP	NASP	ENST00000350030	human	ensembl	74_37	+1	known	missense	c.67	p.D23H	1.000	NULL	pfam_Tetratricopeptide_SHNi-TPR_dom,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NASP	HGNC	ENSG00000132780	tier1	-	-	95	0	0.00	100	7	6.54
NCOA1	0	genome.wustl.edu	37	2	24930741	24930741	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	24930741	24930741	T	G	SNP	NCOA1	ENST00000348332	human	ensembl	74_37	+1	known	missense	c.2402	p.L801R	1.000	pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA1	HGNC	ENSG00000084676	tier1	-	-	44	0	0.00	35	28	44.44
NIPBL	0	genome.wustl.edu	37	5	37064956	37064956	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	5	37064956	37064956	C	G	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.8377	p.R2793G	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	-	-	63	0	0.00	152	20	11.63
NOTCH1	0	genome.wustl.edu	37	9	139391807	139391807	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	9	139391807	139391807	C	T	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	silent	c.6384	p.P2128	0.034	pirsf_Notch	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1	-	-	45	0	0.00	31	8	20.51
OR10K1	0	genome.wustl.edu	37	1	158436142	158436142	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	158436142	158436142	C	T	SNP	OR10K1	ENST00000289451	human	ensembl	74_37	+1	known	missense	c.791	p.T264I	0.392	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10K1	HGNC	ENSG00000173285	tier1	-	-	98	0	0.00	82	20	19.61
OR4B1	0	genome.wustl.edu	37	11	48239183	48239183	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	48239183	48239183	G	A	SNP	OR4B1	ENST00000309562	human	ensembl	74_37	+1	known	silent	c.822	p.T274	0.029	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4B1	HGNC	ENSG00000175619	tier1	-	-	72	0	0.00	56	20	25.97
OR4C6	0	genome.wustl.edu	37	11	55432832	55432832	+	Silent	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	55432832	55432832	T	C	SNP	OR4C6	ENST00000314259	human	ensembl	74_37	+1	known	silent	c.190	p.L64	0.096	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C6	HGNC	ENSG00000181903	tier1	-	-	101	0	0.00	48	39	44.83
OR52E2	0	genome.wustl.edu	37	11	5080542	5080543	+	Frame_Shift_Ins	INS	-	-	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	5080542	5080543	-	A	INS	OR52E2	ENST00000321522	human	ensembl	74_37	-1	known	frame_shift_ins	c.316_315	p.I105fs	0.981:0.966	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR52E2	HGNC	ENSG00000176787	tier1			24	0	0.00	11	6	35.29
OR7A5	0	genome.wustl.edu	37	19	14938698	14938698	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	14938698	14938698	G	A	SNP	OR7A5	ENST00000322301	human	ensembl	74_37	-1	known	missense	c.356	p.A119V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7A5	HGNC	ENSG00000188269	tier1	-	-	66	0	0.00	48	17	26.15
OR8H2	0	genome.wustl.edu	37	11	55873034	55873034	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	55873034	55873034	C	T	SNP	OR8H2	ENST00000313503	human	ensembl	74_37	+1	known	silent	c.516	p.N172	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H2	HGNC	ENSG00000181767	tier1	-	-	194	0	0.00	136	37	21.39
OR8U1	0	genome.wustl.edu	37	11	56143861	56143861	+	Silent	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	56143861	56143861	C	A	SNP	OR8U1	ENST00000302270	human	ensembl	74_37	+1	known	silent	c.762	p.T254	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8U1	HGNC	ENSG00000172199	tier1	-	-	83	0	0.00	42	20	32.26
P2RY10	0	genome.wustl.edu	37	X	78217008	78217008	+	Nonsense_Mutation	SNP	A	A	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	78217008	78217008	A	T	SNP	P2RY10	ENST00000171757	human	ensembl	74_37	+1	known	nonsense	c.991	p.K331*	0.723	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	P2RY10	HGNC	ENSG00000078589	tier1	-	-	136	0	0.00	43	33	43.42
P4HA3	0	genome.wustl.edu	37	11	74015451	74015451	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	74015451	74015451	G	A	SNP	P4HA3	ENST00000331597	human	ensembl	74_37	-1	known	silent	c.207	p.Y69	0.978	pfam_Pro_4_hyd_alph_N	pfam_Pro_4_hyd_alph_N,pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HA3	HGNC	ENSG00000149380	tier1	-	-	79	0	0.00	85	17	16.67
PBX1	0	genome.wustl.edu	37	1	164769117	164769117	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	164769117	164769117	T	A	SNP	PBX1	ENST00000420696	human	ensembl	74_37	+1	known	missense	c.692	p.L231Q	1.000	pfam_PBX,superfamily_Homeodomain-like,pfscan_Homeobox_dom	pfam_PBX,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PBX1	HGNC	ENSG00000185630				24	0	0.00	36	5	12.20
PCDH17	0	genome.wustl.edu	37	13	58207693	58207693	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	13	58207693	58207693	C	T	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.1013	p.T338M	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	67	0	0.00	43	24	35.82
PCSK7	0	genome.wustl.edu	37	11	117100483	117100483	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	117100483	117100483	G	A	SNP	PCSK7	ENST00000320934	human	ensembl	74_37	-1	known	silent	c.78	p.A26	0.163	NULL	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK7	HGNC	ENSG00000160613	tier1	-	-	19	0	0.00	11	6	35.29
PDE10A	0	genome.wustl.edu	37	6	165806201	165806201	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	165806201	165806201	C	T	SNP	PDE10A	ENST00000539869	human	ensembl	74_37	-1	known	silent	c.1590	p.A530	0.998	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE10A	HGNC	ENSG00000112541	tier1	-	-	46	0	0.00	32	16	33.33
PDE4DIP	0	genome.wustl.edu	37	1	144917553	144917553	+	Silent	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	144917553	144917553	A	G	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	silent	c.1551	p.D517	0.968	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	293	0	0.00	350	33	8.62
PHLDB2	0	genome.wustl.edu	37	3	111632337	111632337	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	3	111632337	111632337	G	A	SNP	PHLDB2	ENST00000393925	human	ensembl	74_37	+1	known	missense	c.1507	p.D503N	0.976	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB2	HGNC	ENSG00000144824	tier1	-	-	72	0	0.00	78	7	8.24
PHRF1	0	genome.wustl.edu	37	11	608188	608188	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	608188	608188	C	A	SNP	PHRF1	ENST00000264555	human	ensembl	74_37	+1	known	missense	c.2732	p.A911D	0.001	NULL	pfam_Znf_PHD-finger,pfam_Znf_C3HC4_RING-type,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	PHRF1	HGNC	ENSG00000070047	tier1	-	-	37	0	0.00	41	6	12.77
PJA2	0	genome.wustl.edu	37	5	108679918	108679918	+	Silent	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	5	108679918	108679918	T	C	SNP	PJA2	ENST00000361189	human	ensembl	74_37	-1	known	silent	c.1974	p.K658	0.996	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PJA2	HGNC	ENSG00000198961	tier1	-	-	30	0	0.00	6	16	72.73
PLXNA4	0	genome.wustl.edu	37	7	131872331	131872331	+	Frame_Shift_Del	DEL	C	C	-			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	7	131872331	131872331	C	-	DEL	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	frame_shift_del	c.2892	p.M966fs	0.184	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866	tier1			189	0	0.00	139	14	9.15
PLXNC1	0	genome.wustl.edu	37	12	94692426	94692426	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	94692426	94692426	C	A	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	missense	c.4093	p.L1365I	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040	tier1	-	-	64	0	0.00	42	12	22.22
PPP2R4	0	genome.wustl.edu	37	9	131893899	131893899	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	9	131893899	131893899	G	A	SNP	PPP2R4	ENST00000452489	human	ensembl	74_37	+1	known	silent	c.546	p.T182	0.997	pfam_Phstyr_phstse_ac,pirsf_Phstyr_phstse_ac	pfam_Phstyr_phstse_ac,pirsf_Phstyr_phstse_ac	-	no_errors	PPP2R4	HGNC	ENSG00000119383	tier1	-	-	134	0	0.00	94	28	22.95
PRKG2	0	genome.wustl.edu	37	4	82061719	82061719	+	Silent	SNP	G	G	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	4	82061719	82061719	G	T	SNP	PRKG2	ENST00000264399	human	ensembl	74_37	-1	known	silent	c.1512	p.I504	0.989	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_cGMP-dependent_protein_kinase,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_dom,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin	-	no_errors	PRKG2	HGNC	ENSG00000138669	tier1	-	-	91	0	0.00	53	18	25.35
PTPN5	0	genome.wustl.edu	37	11	18751350	18751350	+	Nonsense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	18751350	18751350	G	A	SNP	PTPN5	ENST00000358540	human	ensembl	74_37	-1	known	nonsense	c.1345	p.R449*	1.000	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN5	HGNC	ENSG00000110786	tier1	-	-	58	0	0.00	47	39	45.35
PYGM	0	genome.wustl.edu	37	11	64520607	64520607	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	64520607	64520607	C	T	SNP	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	missense	c.1456	p.G486S	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGM	HGNC	ENSG00000068976	tier1	-	-	233	0	0.00	282	32	10.19
RAD23B	0	genome.wustl.edu	37	9	110068885	110068885	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	9	110068885	110068885	C	G	SNP	RAD23B	ENST00000358015	human	ensembl	74_37	+1	known	missense	c.454	p.P152A	1.000	tigrfam_Rad23	pfam_XPC-bd,pfam_Ubiquitin_dom,pfam_UBA/Ts_N,pfam_Rad60/SUMO_like,superfamily_XPC-bd,superfamily_UBA-like,smart_Ubiquitin_dom,smart_UBA/transl_elong_EF1B_N_euk,smart_STI1_HS-bd,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup,prints_Rad23,tigrfam_Rad23	-	no_errors	RAD23B	HGNC	ENSG00000119318	tier1	-	-	24	0	0.00	32	11	25.58
RARG	0	genome.wustl.edu	37	12	53609489	53609489	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	53609489	53609489	C	T	SNP	RARG	ENST00000394426	human	ensembl	74_37	-1	known	missense	c.274	p.V92M	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARG	HGNC	ENSG00000172819	tier1	-	-	63	0	0.00	61	9	12.86
RELN	0	genome.wustl.edu	37	7	103338415	103338415	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	7	103338415	103338415	C	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	nonsense	c.1028	p.W343*	1.000	NULL	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056	tier1	-	-	148	0	0.00	149	26	14.86
REST	0	genome.wustl.edu	37	4	57777112	57777112	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	4	57777112	57777112	C	G	SNP	REST	ENST00000309042	human	ensembl	74_37	+1	known	missense	c.308	p.P103R	0.008	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	REST	HGNC	ENSG00000084093	tier1	-	-	58	0	0.00	31	19	38.00
RGAG1	0	genome.wustl.edu	37	X	109695148	109695148	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	109695148	109695148	G	A	SNP	RGAG1	ENST00000465301	human	ensembl	74_37	+1	known	missense	c.1303	p.G435R	0.031	NULL	NULL	-	no_errors	RGAG1	HGNC	ENSG00000243978	tier1	-	-	140	0	0.00	77	32	29.36
RIMKLA	0	genome.wustl.edu	37	1	42865128	42865128	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	42865128	42865128	C	T	SNP	RIMKLA	ENST00000431473	human	ensembl	74_37	+1	known	missense	c.217	p.R73W	0.997	tigrfam_RpS6_RimK/Lys_biosynth_LsyX	pfam_ATP-grasp_RimK-type,pfam_GSHS_ATP-bd,pfam_ATP-grasp_DUF201-type,pfscan_ATP-grasp,tigrfam_RpS6_RimK/Lys_biosynth_LsyX	-	no_errors	RIMKLA	HGNC	ENSG00000177181				13	0	0.00	16	4	20.00
RNF214	0	genome.wustl.edu	37	11	117153873	117153873	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	117153873	117153873	G	A	SNP	RNF214	ENST00000300650	human	ensembl	74_37	+1	known	missense	c.1993	p.V665I	1.000	pfscan_Znf_RING	pfscan_Znf_RING	-	no_errors	RNF214	HGNC	ENSG00000167257	tier1	-	-	54	0	0.00	43	8	15.69
SALL3	0	genome.wustl.edu	37	18	76753643	76753643	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	18	76753643	76753643	G	A	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.1652	p.R551H	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463	tier1	-	-	9	0	0.00	3	6	66.67
SCN2B	0	genome.wustl.edu	37	11	118047103	118047103	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	118047103	118047103	G	A	SNP	SCN2B	ENST00000278947	human	ensembl	74_37	-1	known	missense	c.44	p.T15M	1.000	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom,prints_Myelin_P0	-	no_errors	SCN2B	HGNC	ENSG00000149575	tier1	rs201373014	-	75	0	0.00	53	14	20.90
SEC14L4	0	genome.wustl.edu	37	22	30886179	30886179	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	22	30886179	30886179	T	C	SNP	SEC14L4	ENST00000255858	human	ensembl	74_37	-1	known	missense	c.1136	p.Y379C	1.000	superfamily_GOLD,pfscan_GOLD	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_GOLD,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L4	HGNC	ENSG00000133488	tier1	-	-	49	0	0.00	65	21	24.42
SETD1A	0	genome.wustl.edu	37	16	30976135	30976135	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	30976135	30976135	C	G	SNP	SETD1A	ENST00000262519	human	ensembl	74_37	+1	known	missense	c.1072	p.Q358E	1.000	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1A	HGNC	ENSG00000099381	tier1	-	-	134	0	0.00	104	42	28.77
SFTPA1	0	genome.wustl.edu	37	10	81373717	81373717	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	81373717	81373717	C	T	SNP	SFTPA1	ENST00000419470	human	ensembl	74_37	+1	known	missense	c.640	p.R214C	0.020	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	SFTPA1	HGNC	ENSG00000122852	tier1	-	-	177	0	0.00	142	27	15.98
SH3BP4	0	genome.wustl.edu	37	2	235951043	235951043	+	Missense_Mutation	SNP	A	A	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	235951043	235951043	A	T	SNP	SH3BP4	ENST00000344528	human	ensembl	74_37	+1	known	missense	c.1630	p.N544Y	1.000	NULL	pfam_SH3_2,pfam_SH3_domain,pfam_ZU5,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	SH3BP4	HGNC	ENSG00000130147	tier1	-	-	52	0	0.00	53	14	20.90
SLC13A5	0	genome.wustl.edu	37	17	6606380	6606380	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	17	6606380	6606380	T	C	SNP	SLC13A5	ENST00000433363	human	ensembl	74_37	-1	known	missense	c.625	p.T209A	0.971	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A5	HGNC	ENSG00000141485	tier1	-	-	82	0	0.00	56	37	39.78
SLC26A6	0	genome.wustl.edu	37	3	48669462	48669462	+	Missense_Mutation	SNP	T	T	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	3	48669462	48669462	T	A	SNP	SLC26A6	ENST00000395550	human	ensembl	74_37	-1	known	missense	c.601	p.I201F	0.992	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A6	HGNC	ENSG00000225697	tier1	-	-	52	0	0.00	23	18	43.90
SLC45A1	0	genome.wustl.edu	37	1	8390650	8390650	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	8390650	8390650	C	T	SNP	SLC45A1	ENST00000377479	human	ensembl	74_37	+1	known	missense	c.1199	p.S400L	1.000	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A1	HGNC	ENSG00000162426	tier1	-	-	31	0	0.00	28	5	15.15
SLITRK5	0	genome.wustl.edu	37	13	88327784	88327784	+	Silent	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	13	88327784	88327784	C	T	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	silent	c.141	p.I47	0.998	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	tier1	-	-	84	0	0.00	74	73	49.66
SLU7	0	genome.wustl.edu	37	5	159834541	159834541	+	Missense_Mutation	SNP	G	G	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	5	159834541	159834541	G	C	SNP	SLU7	ENST00000297151	human	ensembl	74_37	-1	known	missense	c.1067	p.S356C	1.000	pfam_Slu7	pfam_Slu7,superfamily_Znf_CCHC	-	no_errors	SLU7	HGNC	ENSG00000164609	tier1	-	-	58	0	0.00	41	15	26.79
SORCS1	0	genome.wustl.edu	37	10	108489828	108489828	+	Missense_Mutation	SNP	T	T	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	108489828	108489828	T	G	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.1004	p.E335A	1.000	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018	tier1	-	-	106	0	0.00	65	22	25.29
SPAG11B	0	genome.wustl.edu	37	8	7320265	7320265	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	8	7320265	7320265	G	A	SNP	SPAG11B	ENST00000398462	human	ensembl	74_37	-1	known	missense	c.178	p.R60W	0.000	pfam_Sperm_Ag_HE2	pfam_Sperm_Ag_HE2,pfam_Defensin_beta-typ	-	no_errors	SPAG11B	HGNC	ENSG00000164871	tier1	rs138861652	-	20	0	0.00	31	8	20.51
SPOCK3	0	genome.wustl.edu	37	4	167713420	167713420	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	4	167713420	167713420	T	C	SNP	SPOCK3	ENST00000357154	human	ensembl	74_37	-1	known	missense	c.619	p.R207G	1.000	pfam_SPARC/Testican_Ca-bd-dom	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK3	HGNC	ENSG00000196104	tier1	-	-	58	0	0.00	34	4	10.53
STK24	0	genome.wustl.edu	37	13	99171621	99171621	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	13	99171621	99171621	A	G	SNP	STK24	ENST00000376547	human	ensembl	74_37	-1	known	missense	c.185	p.V62A	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	STK24	HGNC	ENSG00000102572	tier1	-	-	240	0	0.00	181	183	50.27
TAF3	0	genome.wustl.edu	37	10	8006454	8006454	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	8006454	8006454	G	A	SNP	TAF3	ENST00000344293	human	ensembl	74_37	+1	known	silent	c.981	p.T327	0.000	NULL	pfam_BTP,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Histone-fold,smart_BTP,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	TAF3	HGNC	ENSG00000165632				18	0	0.00	10	3	23.08
TALDO1	0	genome.wustl.edu	37	11	764878	764878	+	RNA	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	764878	764878	C	T	SNP	TALDO1	ENST00000532202	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	TALDO1	HGNC	ENSG00000177156	tier1	-	-	47	0	0.00	26	18	40.91
TBL1X	0	genome.wustl.edu	37	X	9656115	9656115	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	9656115	9656115	T	C	SNP	TBL1X	ENST00000217964	human	ensembl	74_37	+1	known	missense	c.416	p.M139T	1.000	NULL	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL1X	HGNC	ENSG00000101849	tier1	-	-	35	0	0.00	9	6	40.00
TCF25	0	genome.wustl.edu	37	16	89962425	89962425	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	16	89962425	89962425	C	T	SNP	TCF25	ENST00000263346	human	ensembl	74_37	+1	known	missense	c.956	p.A319V	0.997	pfam_TCF25	pfam_TCF25	-	no_errors	TCF25	HGNC	ENSG00000141002				24	0	0.00	24	5	17.24
TCTN2	0	genome.wustl.edu	37	12	124175084	124175084	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	124175084	124175084	C	G	SNP	TCTN2	ENST00000303372	human	ensembl	74_37	+1	known	missense	c.896	p.S299C	1.000	pfam_DUF1619	pfam_DUF1619	-	no_errors	TCTN2	HGNC	ENSG00000168778	tier1	-	-	41	0	0.00	30	25	45.45
TFDP3	0	genome.wustl.edu	37	X	132351471	132351471	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	132351471	132351471	C	T	SNP	TFDP3	ENST00000310125	human	ensembl	74_37	-1	known	missense	c.817	p.D273N	1.000	pfam_Transc_factor_DP_C,pirsf_Transcrpt_fac_DP	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP3	HGNC	ENSG00000183434	tier1	-	-	124	0	0.00	92	9	8.91
TGIF2LX	0	genome.wustl.edu	37	X	89177509	89177509	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	X	89177509	89177509	T	C	SNP	TGIF2LX	ENST00000283891	human	ensembl	74_37	+1	known	missense	c.425	p.V142A	0.000	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TGIF2LX	HGNC	ENSG00000153779	tier1	-	-	45	0	0.00	27	13	32.50
THSD7A	0	genome.wustl.edu	37	7	11521609	11521609	+	Missense_Mutation	SNP	C	C	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	7	11521609	11521609	C	G	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	missense	c.1823	p.G608A	1.000	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108	tier1	-	-	34	0	0.00	26	5	16.13
THSD7B	0	genome.wustl.edu	37	2	137872775	137872775	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	137872775	137872775	G	A	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	silent	c.1281	p.T427	0.110	superfamily_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	tier1	-	-	26	0	0.00	6	24	80.00
TMC6	0	genome.wustl.edu	37	17	76120642	76120642	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	17	76120642	76120642	G	A	SNP	TMC6	ENST00000322914	human	ensembl	74_37	-1	known	missense	c.854	p.A285V	0.000	NULL	pfam_TMC	-	no_errors	TMC6	HGNC	ENSG00000141524	tier1	-	-	26	0	0.00	19	7	26.92
TMEM132D	0	genome.wustl.edu	37	12	129694197	129694197	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	12	129694197	129694197	G	A	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	silent	c.1311	p.I437	1.000	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952	tier1	-	-	44	0	0.00	50	14	21.88
TP53	0	genome.wustl.edu	37	17	7577498	7577498	+	Splice_Site	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	17	7577498	7577498	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site	c.782+1	e6+1	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	35	0	0.00	2	20	90.91
TRIB1	0	genome.wustl.edu	37	8	126448603	126448603	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	8	126448603	126448603	T	C	SNP	TRIB1	ENST00000311922	human	ensembl	74_37	+1	known	missense	c.1009	p.W337R	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	TRIB1	HGNC	ENSG00000173334	tier1	-	-	62	0	0.00	85	17	16.67
TTC3	0	genome.wustl.edu	37	21	38573747	38573747	+	Nonsense_Mutation	SNP	A	A	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	21	38573747	38573747	A	T	SNP	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	nonsense	c.5950	p.K1984*	0.964	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670	tier1	-	-	94	0	0.00	56	22	28.21
TTN	0	genome.wustl.edu	37	2	179465771	179465771	+	Silent	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	179465771	179465771	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.48156	p.A16052	0.994	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	92	0	0.00	93	38	29.01
TTN	0	genome.wustl.edu	37	2	179478615	179478615	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	179478615	179478615	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.41691	p.D13897	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	87	0	0.00	78	69	46.62
TTN	0	genome.wustl.edu	37	2	179496952	179496952	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	179496952	179496952	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.35965	p.D11989N	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	21	0	0.00	13	4	23.53
TTN	0	genome.wustl.edu	37	2	179647001	179647001	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	179647001	179647001	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.3318	p.G1106	0.021	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	rs141768043	-	48	0	0.00	59	20	25.32
UGT1A4	0	genome.wustl.edu	37	2	234676577	234676577	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	2	234676577	234676577	T	C	SNP	UGT1A4	ENST00000373409	human	ensembl	74_37	+1	known	missense	c.1082	p.L361P	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A4	HGNC	ENSG00000244474	tier1	-	-	93	0	0.00	85	9	9.57
UPK1A	0	genome.wustl.edu	37	19	36166890	36166890	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	36166890	36166890	G	A	SNP	UPK1A	ENST00000379013	human	ensembl	74_37	+1	known	missense	c.617	p.R206H	0.986	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	UPK1A	HGNC	ENSG00000105668	tier1	-	-	45	0	0.00	34	9	20.93
VAV1	0	genome.wustl.edu	37	19	6772883	6772883	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	6772883	6772883	G	T	SNP	VAV1	ENST00000602142	human	ensembl	74_37	+1	known	missense	c.65	p.R22L	0.999	pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH3_domain,prints_SH2,prints_SM22_calponin	-	no_errors	VAV1	HGNC	ENSG00000141968	tier1	-	-	43	0	0.00	44	7	13.73
VPS13D	0	genome.wustl.edu	37	1	12374367	12374367	+	Missense_Mutation	SNP	G	G	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	1	12374367	12374367	G	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.7131	p.Q2377H	1.000	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	26	0	0.00	18	6	25.00
VSTM4	0	genome.wustl.edu	37	10	50315892	50315892	+	Silent	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	50315892	50315892	G	A	SNP	VSTM4	ENST00000332853	human	ensembl	74_37	-1	known	silent	c.204	p.F68	0.004	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM4	HGNC	ENSG00000165633	tier1	-	-	39	0	0.00	19	13	40.62
ZDHHC14	0	genome.wustl.edu	37	6	158053874	158053874	+	Missense_Mutation	SNP	C	C	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	6	158053874	158053874	C	A	SNP	ZDHHC14	ENST00000359775	human	ensembl	74_37	+1	known	missense	c.712	p.Q238K	0.992	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC14	HGNC	ENSG00000175048	tier1	-	-	391	0	0.00	306	74	19.47
ZIC4	0	genome.wustl.edu	37	3	147108992	147108992	+	Missense_Mutation	SNP	G	G	A			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	3	147108992	147108992	G	A	SNP	ZIC4	ENST00000525172	human	ensembl	74_37	-1	known	missense	c.880	p.R294C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1	-	-	45	0	0.00	39	6	13.33
ZIM3	0	genome.wustl.edu	37	19	57646962	57646962	+	Missense_Mutation	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	57646962	57646962	T	C	SNP	ZIM3	ENST00000269834	human	ensembl	74_37	-1	known	missense	c.743	p.E248G	0.980	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZIM3	HGNC	ENSG00000141946	tier1	-	-	75	0	0.00	87	22	20.18
ZNF300	0	genome.wustl.edu	37	5	150275502	150275502	+	Silent	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	5	150275502	150275502	A	G	SNP	ZNF300	ENST00000446148	human	ensembl	74_37	-1	known	silent	c.1347	p.G449	0.598	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF300	HGNC	ENSG00000145908	tier1	-	-	48	0	0.00	27	25	48.08
ZNF341	0	genome.wustl.edu	37	20	32369095	32369095	+	Splice_Site	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	20	32369095	32369095	A	G	SNP	ZNF341	ENST00000375200	human	ensembl	74_37	+1	known	splice_site	c.1623-2	e11-2	0.992	-	-	-	no_errors	ZNF341	HGNC	ENSG00000131061	tier1	-	-	124	0	0.00	174	68	27.98
ZNF408	0	genome.wustl.edu	37	11	46724583	46724583	+	Missense_Mutation	SNP	C	C	T			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	11	46724583	46724583	C	T	SNP	ZNF408	ENST00000311764	human	ensembl	74_37	+1	known	missense	c.442	p.R148W	0.002	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF408	HGNC	ENSG00000175213	tier1	-	-	31	0	0.00	40	6	12.77
ZNF561	0	genome.wustl.edu	37	19	9721707	9721707	+	Silent	SNP	T	T	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	9721707	9721707	T	G	SNP	ZNF561	ENST00000302851	human	ensembl	74_37	-1	known	silent	c.630	p.A210	0.002	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF561	HGNC	ENSG00000171469	tier1	-	-	47	0	0.00	41	11	21.15
ZNF610	0	genome.wustl.edu	37	19	52869270	52869270	+	Silent	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	52869270	52869270	T	C	SNP	ZNF610	ENST00000321287	human	ensembl	74_37	+1	known	silent	c.639	p.F213	0.007	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF610	HGNC	ENSG00000167554	tier1	-	-	46	0	0.00	33	8	19.51
ZNF623	0	genome.wustl.edu	37	8	144733543	144733543	+	Missense_Mutation	SNP	A	A	G			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	8	144733543	144733543	A	G	SNP	ZNF623	ENST00000501748	human	ensembl	74_37	+1	known	missense	c.1501	p.N501D	0.069	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF623	HGNC	ENSG00000183309	tier1	-	-	92	0	0.00	105	11	9.48
ZNF85	0	genome.wustl.edu	37	19	21132109	21132109	+	Silent	SNP	T	T	C			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	19	21132109	21132109	T	C	SNP	ZNF85	ENST00000328178	human	ensembl	74_37	+1	known	silent	c.789	p.C263	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF85	HGNC	ENSG00000105750	tier1	-	-	30	0	0.00	25	12	32.43
ZSWIM8	0	genome.wustl.edu	37	10	75560546	75560546	+	RNA	DEL	C	C	-			TCGA-RD-A8N6-01A-11D-A364-08	TCGA-RD-A8N6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	da25560c-b18a-46ff-b89f-d139aacc7107	1b771fd4-3ba8-423a-b938-174398672e56	10	75560546	75560546	C	-	DEL	ZSWIM8	ENST00000603195	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.749	-	-	-	no_errors	ZSWIM8	HGNC	ENSG00000214655	tier1			15	0	0.00	11	5	31.25
