Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCC9	0	genome.wustl.edu	37	12	21981946	21981946	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	21981946	21981946	G	A	SNP	ABCC9	ENST00000261200	human	ensembl	74_37	-1	known	silent	c.3615	p.N1205	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2	-	no_errors	ABCC9	HGNC	ENSG00000069431	tier1	rs17846779	-	109	0	0.00	115	22	16.06
ACO1	0	genome.wustl.edu	37	9	32420998	32420999	+	Frame_Shift_Ins	INS	-	-	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	32420998	32420999	-	T	INS	ACO1	ENST00000309951	human	ensembl	74_37	+1	known	frame_shift_ins	c.943_944	p.S316fs	1.000:1.000	pfam_Acoase/IPM_deHydtase_lsu_aba,superfamily_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	ACO1	HGNC	ENSG00000122729	tier1			337	0	0.00	155	64	29.22
ADCY10	0	genome.wustl.edu	37	1	167847828	167847829	+	Frame_Shift_Ins	INS	-	-	AGTA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	167847828	167847829	-	AGTA	INS	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	frame_shift_ins	c.1262_1261	p.Y421fs	1.000:1.000	superfamily_A/G_cyclase,pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199	tier1			111	0	0.00	81	16	16.49
AHNAK2	0	genome.wustl.edu	37	14	105405060	105405060	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	105405060	105405060	C	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.16728	p.M5576I	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	33	0	0.00	17	4	19.05
AKAP13	0	genome.wustl.edu	37	15	86122605	86122606	+	In_Frame_Ins	INS	-	-	CTG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	86122605	86122606	-	CTG	INS	AKAP13	ENST00000361243	human	ensembl	74_37	+1	known	in_frame_ins	c.1306_1307	p.Q436in_frame_insPE	0.000:0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776	tier1			60	0	0.00	38	8	17.39
AKAP6	0	genome.wustl.edu	37	14	33015304	33015305	+	Frame_Shift_Ins	INS	-	-	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	33015304	33015305	-	G	INS	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	frame_shift_ins	c.1445_1446	p.R484fs	1.000:1.000	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320	tier1			193	0	0.00	136	34	20.00
ALDH18A1	0	genome.wustl.edu	37	10	97386457	97386459	+	Splice_Site	DEL	TAC	TAC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	TAC	TAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	10	97386457	97386459	TAC	-	DEL	ALDH18A1	ENST00000371224	human	ensembl	74_37	-1	known	splice_site_del	c.1152+1_1152+1	e9+1	0.435:0.997:1.000	-	-	-	no_errors	ALDH18A1	HGNC	ENSG00000059573	tier1			62	0	0.00	48	7	12.73
ANKRD52	0	genome.wustl.edu	37	12	56637078	56637078	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	56637078	56637078	C	-	DEL	ANKRD52	ENST00000267116	human	ensembl	74_37	-1	known	frame_shift_del	c.3079	p.V1027fs	1.000	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD52	HGNC	ENSG00000139645	tier1			54	0	0.00	18	2	10.00
AP3B2	0	genome.wustl.edu	37	15	83335571	83335571	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	83335571	83335571	C	A	SNP	AP3B2	ENST00000261722	human	ensembl	74_37	-1	known	missense	c.1780	p.A594S	0.973	superfamily_ARM-type_fold,pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,pirsf_AP3_beta	-	no_errors	AP3B2	HGNC	ENSG00000103723	tier1	-	-	56	0	0.00	42	15	26.32
ARFGEF2	0	genome.wustl.edu	37	20	47605052	47605053	+	In_Frame_Ins	INS	-	-	AGT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	20	47605052	47605053	-	AGT	INS	ARFGEF2	ENST00000371917	human	ensembl	74_37	+1	known	in_frame_ins	c.2386_2387	p.YIK797in_frame_ins*	1.000:1.000	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF2	HGNC	ENSG00000124198	tier1			101	0	0.00	119	20	14.39
ARHGEF39	0	genome.wustl.edu	37	9	35664030	35664031	+	Frame_Shift_Ins	INS	-	-	GT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	35664030	35664031	-	GT	INS	ARHGEF39	ENST00000378387	human	ensembl	74_37	-1	known	frame_shift_ins	c.448_447	p.P149fs	0.866:0.864	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF39	HGNC	ENSG00000137135	tier1			81	0	0.00	48	14	22.58
ARID1B	0	genome.wustl.edu	37	6	157522222	157522223	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	157522222	157522223	-	A	INS	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	frame_shift_ins	c.4614_4615	p.M1538fs	0.106:0.913	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618	tier1			85	0	0.00	52	15	22.39
ATAD2	0	genome.wustl.edu	37	8	124335209	124335209	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	124335209	124335209	C	T	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	missense	c.4100	p.R1367H	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802	tier1	rs147449805	-	75	0	0.00	82	15	15.46
ATP13A5	0	genome.wustl.edu	37	3	193049076	193049077	+	Frame_Shift_Ins	INS	-	-	ATGG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	3	193049076	193049077	-	ATGG	INS	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	frame_shift_ins	c.1297_1296	p.M432fs	1.000:0.929	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527	tier1			54	0	0.00	40	4	9.09
ATP8B2	0	genome.wustl.edu	37	1	154317558	154317559	+	In_Frame_Ins	INS	-	-	TGT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	154317558	154317559	-	TGT	INS	ATP8B2	ENST00000368489	human	ensembl	74_37	+1	known	in_frame_ins	c.2497_2498	p.834in_frame_insL	0.996:1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B2	HGNC	ENSG00000143515	tier1			177	0	0.00	117	27	18.75
ATP9A	0	genome.wustl.edu	37	20	50342378	50342379	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	20	50342378	50342379	AG	-	DEL	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	frame_shift_del	c.307_306	p.T104fs	1.000:0.929	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793	tier1			50	0	0.00	51	9	15.00
BOC	0	genome.wustl.edu	37	3	112989649	112989652	+	Frame_Shift_Del	DEL	TAAC	TAAC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	TAAC	TAAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	3	112989649	112989652	TAAC	-	DEL	BOC	ENST00000273395	human	ensembl	74_37	+1	known	frame_shift_del	c.525_528	p.N176fs	0.988:1.000:1.000:1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	BOC	HGNC	ENSG00000144857	tier1			89	0	0.00	32	30	48.39
C1orf210	0	genome.wustl.edu	37	1	43748922	43748923	+	Frame_Shift_Ins	INS	-	-	TT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	43748922	43748923	-	TT	INS	C1orf210	ENST00000423420	human	ensembl	74_37	-1	known	frame_shift_ins	c.20_19	p.T7fs	0.991:0.326	NULL	NULL	-	no_errors	C1orf210	HGNC	ENSG00000253313	tier1			44	0	0.00	33	9	21.43
C2CD3	0	genome.wustl.edu	37	11	73803554	73803555	+	In_Frame_Ins	INS	-	-	AAC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	73803554	73803555	-	AAC	INS	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	in_frame_ins	c.3424_3423	p.1141in_frame_insV	1.000:1.000	smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014	tier1			88	0	0.00	72	13	15.29
C2CD3	0	genome.wustl.edu	37	11	73803555	73803555	+	Silent	SNP	G	G	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	73803555	73803555	G	C	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	silent	c.3423	p.T1141	1.000	smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014	tier1	-	-	86	0	0.00	67	14	17.28
C9orf96	0	genome.wustl.edu	37	9	136270026	136270027	+	In_Frame_Ins	INS	-	-	TGC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	136270026	136270027	-	TGC	INS	C9orf96	ENST00000371957	human	ensembl	74_37	+1	known	in_frame_ins	c.1846_1847	p.619in_frame_insL	0.988:1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	C9orf96	HGNC	ENSG00000198870	tier1			112	0	0.00	75	19	20.21
CACNA1F	0	genome.wustl.edu	37	X	49076225	49076227	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	X	49076225	49076227	TCC	-	DEL	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	in_frame_del	c.2444_2442	p.E818in_frame_del	0.912:0.895:0.691	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1			8	0	0.00	5	2	28.57
CASZ1	0	genome.wustl.edu	37	1	10700021	10700022	+	In_Frame_Ins	INS	-	-	CGC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	10700021	10700022	-	CGC	INS	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	in_frame_ins	c.4258_4257	p.1419in_frame_insA	0.517:0.046	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	tier1			32	0	0.00	23	8	25.81
CD47	0	genome.wustl.edu	37	3	107778384	107778385	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	3	107778384	107778385	AT	-	DEL	CD47	ENST00000361309	human	ensembl	74_37	-1	known	frame_shift_del	c.606_605	p.Y202fs	0.999:1.000	pfam_CD47_TM	pfam_CD47_Vset,pfam_CD47_TM,pfscan_Ig-like_dom	-	no_errors	CD47	HGNC	ENSG00000196776	tier1			98	0	0.00	79	46	36.80
CDH4	0	genome.wustl.edu	37	20	60498692	60498692	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	20	60498692	60498692	G	A	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	missense	c.1558	p.V520M	0.425	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242	tier1	-	-	35	0	0.00	28	6	17.65
CENPL	0	genome.wustl.edu	37	1	173780343	173780343	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	173780343	173780343	T	G	SNP	CENPL	ENST00000356198	human	ensembl	74_37	-1	known	missense	c.95	p.E32A	0.790	NULL	NULL	-	no_errors	CENPL	HGNC	ENSG00000120334	tier1	-	-	126	0	0.00	66	26	27.96
CNTN5	0	genome.wustl.edu	37	11	99931992	99931992	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	99931992	99931992	T	A	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	missense	c.1029	p.S343R	0.833	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972	tier1	-	-	167	0	0.00	141	11	7.24
CR2	0	genome.wustl.edu	37	1	207644426	207644426	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	207644426	207644426	G	A	SNP	CR2	ENST00000367057	human	ensembl	74_37	+1	known	missense	c.1487	p.G496D	0.967	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322	tier1	-	-	85	0	0.00	46	12	20.69
DBF4	0	genome.wustl.edu	37	7	87537084	87537085	+	Frame_Shift_Ins	INS	-	-	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	7	87537084	87537085	-	T	INS	DBF4	ENST00000265728	human	ensembl	74_37	+1	known	frame_shift_ins	c.1631_1632	p.V545fs	0.003:0.000	NULL	pfam_Znf_DBF,superfamily_BRCT_dom,smart_Znf_DBF	-	no_errors	DBF4	HGNC	ENSG00000006634	tier1			126	0	0.00	114	27	19.15
DDX19B	0	genome.wustl.edu	37	16	70365712	70365713	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	16	70365712	70365713	-	AG	INS	DDX19B	ENST00000288071	human	ensembl	74_37	+1	known	frame_shift_ins	c.1111_1112	p.A373fs	1.000:1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX19B	HGNC	ENSG00000157349	tier1			38	0	0.00	16	11	40.74
DPRX	0	genome.wustl.edu	37	19	54139886	54139886	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	54139886	54139886	G	T	SNP	DPRX	ENST00000376650	human	ensembl	74_37	+1	known	missense	c.220	p.A74S	0.017	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	DPRX	HGNC	ENSG00000204595	tier1	-	-	54	0	0.00	54	13	19.40
DPY19L2P1	0	genome.wustl.edu	37	7	35187465	35187465	+	RNA	SNP	G	G	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	7	35187465	35187465	G	T	SNP	DPY19L2P1	ENST00000458672	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212	tier1	-	-	25	0	0.00	20	6	23.08
DSP	0	genome.wustl.edu	37	6	7559468	7559468	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	7559468	7559468	G	A	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	silent	c.432	p.Q144	1.000	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696	tier1	-	-	71	0	0.00	30	18	37.50
DUOX1	0	genome.wustl.edu	37	15	45455820	45455821	+	Frame_Shift_Ins	INS	-	-	TGGT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	45455820	45455821	-	TGGT	INS	DUOX1	ENST00000321429	human	ensembl	74_37	+1	known	frame_shift_ins	c.4339_4340	p.S1449fs	1.000:1.000	pfam_Fe_red_NAD-bd_6	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX1	HGNC	ENSG00000137857	tier1			102	0	0.00	69	17	19.77
DUSP4	0	genome.wustl.edu	37	8	29194858	29194859	+	Frame_Shift_Ins	INS	-	-	AT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	29194858	29194859	-	AT	INS	DUSP4	ENST00000240100	human	ensembl	74_37	-1	known	frame_shift_ins	c.870_869	p.C291fs	1.000:1.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP4	HGNC	ENSG00000120875	tier1			58	0	0.00	28	13	31.71
DYRK3	0	genome.wustl.edu	37	1	206822307	206822308	+	Frame_Shift_Ins	INS	-	-	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	206822307	206822308	-	T	INS	DYRK3	ENST00000367109	human	ensembl	74_37	+1	known	frame_shift_ins	c.1764_1765	p.*588fs	1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK3	HGNC	ENSG00000143479	tier1			100	0	0.00	68	20	22.73
EGFL8	0	genome.wustl.edu	37	6	32134572	32134573	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	32134572	32134573	GC	-	DEL	EGFL8	ENST00000333845	human	ensembl	74_37	+1	known	frame_shift_del	c.319_320	p.L108fs	1.000:0.999	pfscan_EMI_domain	pfam_EMI_domain,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	EGFL8	HGNC	ENSG00000241404	tier1			30	0	0.00	21	6	22.22
EIF2AK3	0	genome.wustl.edu	37	2	88874956	88874957	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	2	88874956	88874957	-	A	INS	EIF2AK3	ENST00000303236	human	ensembl	74_37	-1	known	frame_shift_ins	c.2045_2044	p.W682fs	1.000:1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK3	HGNC	ENSG00000172071	tier1			57	0	0.00	39	15	27.78
ENC1	0	genome.wustl.edu	37	5	73931865	73931866	+	Frame_Shift_Ins	INS	-	-	AGTT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	5	73931865	73931866	-	AGTT	INS	ENC1	ENST00000302351	human	ensembl	74_37	-1	known	frame_shift_ins	c.446_445	p.C149fs	1.000:1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	ENC1	HGNC	ENSG00000171617	tier1			109	0	0.00	56	22	28.21
ENPP5	0	genome.wustl.edu	37	6	46135602	46135605	+	Frame_Shift_Del	DEL	GTAT	GTAT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	GTAT	GTAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	46135602	46135605	GTAT	-	DEL	ENPP5	ENST00000230565	human	ensembl	74_37	-1	known	frame_shift_del	c.398_395	p.H132fs	0.000:0.000:0.060:0.981	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP5	HGNC	ENSG00000112796	tier1			113	0	0.00	49	15	23.44
ENSG00000231868	0	genome.wustl.edu	37	1	6505708	6505708	+	RNA	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	6505708	6505708	C	A	SNP	ENSG00000231868	ENST00000419034	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP1-202O8.2	Clone_based_vega_gene	ENSG00000231868	tier1	-	-	31	0	0.00	21	7	25.00
ERI1	0	genome.wustl.edu	37	8	8887408	8887409	+	Frame_Shift_Ins	INS	-	-	AGCA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	8887408	8887409	-	AGCA	INS	ERI1	ENST00000250263	human	ensembl	74_37	+1	known	frame_shift_ins	c.914_915	p.V307fs	1.000:0.982	superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,pfam_SAP_dom,superfamily_RNaseH-like_dom,smart_SAP_dom,smart_Exonuclease,pfscan_SAP_dom	-	no_errors	ERI1	HGNC	ENSG00000104626	tier1			101	0	0.00	57	13	18.57
ESRRB	0	genome.wustl.edu	37	14	76905765	76905765	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	76905765	76905765	G	A	SNP	ESRRB	ENST00000380887	human	ensembl	74_37	+1	known	silent	c.69	p.P23	0.675	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESRRB	HGNC	ENSG00000119715	tier1	rs1064436	-	66	0	0.00	37	19	33.93
EXOC3	0	genome.wustl.edu	37	5	453712	453715	+	Frame_Shift_Del	DEL	TCAC	TCAC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	TCAC	TCAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	5	453712	453715	TCAC	-	DEL	EXOC3	ENST00000315013	human	ensembl	74_37	+1	known	frame_shift_del	c.592_595	p.S198fs	0.976:0.978:0.137:0.318	pfam_Sec6	pfam_Sec6	-	no_errors	EXOC3	HGNC	ENSG00000180104	tier1			79	0	0.00	44	13	22.81
EXOC7	0	genome.wustl.edu	37	17	74097940	74097941	+	Frame_Shift_Ins	INS	-	-	AC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	74097940	74097941	-	AC	INS	EXOC7	ENST00000335146	human	ensembl	74_37	-1	known	frame_shift_ins	c.131_130	p.S44fs	1.000:1.000	NULL	pfam_Exo70,superfamily_Cullin_repeat-like_dom	-	no_errors	EXOC7	HGNC	ENSG00000182473	tier1			42	0	0.00	35	11	23.91
FAM179B	0	genome.wustl.edu	37	14	45496649	45496649	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	45496649	45496649	C	T	SNP	FAM179B	ENST00000361577	human	ensembl	74_37	+1	known	missense	c.3476	p.S1159L	0.961	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718	tier1	-	-	63	0	0.00	40	13	24.53
FANCM	0	genome.wustl.edu	37	14	45644500	45644500	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	45644500	45644500	C	T	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.2543	p.T848I	0.001	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	37	0	0.00	49	11	18.33
FBXO27	0	genome.wustl.edu	37	19	39521724	39521725	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	39521724	39521725	-	CT	INS	FBXO27	ENST00000292853	human	ensembl	74_37	-1	known	frame_shift_ins	c.517_516	p.G172fs	0.898:0.966	pfam_F-box-assoc_dom,superfamily_Galactose-bd-like,pfscan_F-box-assoc_dom	pfam_F-box-assoc_dom,pfam_F-box_dom,superfamily_Galactose-bd-like,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom,pfscan_F-box-assoc_dom	-	no_errors	FBXO27	HGNC	ENSG00000161243	tier1			127	0	0.00	86	15	14.85
FGF8	0	genome.wustl.edu	37	10	103534666	103534666	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	10	103534666	103534666	T	-	DEL	FGF8	ENST00000320185	human	ensembl	74_37	-1	known	frame_shift_del	c.160	p.T54fs	1.000	superfamily_Cytokine_IL1-like	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF8	HGNC	ENSG00000107831	tier1			32	0	0.00	34	12	26.09
FLG2	0	genome.wustl.edu	37	1	152327704	152327704	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	152327704	152327704	C	A	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	missense	c.2558	p.S853I	0.813	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520	tier1	-	-	406	0	0.00	282	76	21.23
FMO3	0	genome.wustl.edu	37	1	171076876	171076877	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	171076876	171076877	AC	-	DEL	FMO3	ENST00000367755	human	ensembl	74_37	+1	known	frame_shift_del	c.382_383	p.T128fs	0.039:0.005	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_3	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_3,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO3	HGNC	ENSG00000007933	tier1			78	0	0.00	60	18	23.08
FRMD3	0	genome.wustl.edu	37	9	86153098	86153098	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	86153098	86153098	T	-	DEL	FRMD3	ENST00000304195	human	ensembl	74_37	-1	known	frame_shift_del	c.49	p.M17fs	1.000	NULL	pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FRMD3	HGNC	ENSG00000172159	tier1			20	0	0.00	12	2	14.29
GNPTAB	0	genome.wustl.edu	37	12	102224402	102224403	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	102224402	102224403	AC	-	DEL	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	frame_shift_del	c.52_51	p.Y18fs	1.000:1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	tier1			20	0	0.00	18	5	21.74
GPR137C	0	genome.wustl.edu	37	14	53020294	53020295	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	53020294	53020295	-	CT	INS	GPR137C	ENST00000321662	human	ensembl	74_37	+1	known	frame_shift_ins	c.429_430	p.Y144fs	1.000:1.000	NULL	NULL	-	no_errors	GPR137C	HGNC	ENSG00000180998	tier1			16	0	0.00	18	9	33.33
GSKIP	0	genome.wustl.edu	37	14	96848830	96848830	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	96848830	96848830	A	C	SNP	GSKIP	ENST00000438650	human	ensembl	74_37	+1	known	missense	c.246	p.E82D	0.991	pfam_DUF727,superfamily_GSKIP_dom	pfam_DUF727,superfamily_GSKIP_dom	-	no_errors	GSKIP	HGNC	ENSG00000100744	tier1	-	-	52	0	0.00	46	10	17.86
GSPT2	0	genome.wustl.edu	37	X	51487820	51487820	+	Silent	SNP	T	T	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	X	51487820	51487820	T	C	SNP	GSPT2	ENST00000340438	human	ensembl	74_37	+1	known	silent	c.1098	p.C366	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_Ataxin-2_C,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom	-	no_errors	GSPT2	HGNC	ENSG00000189369	tier1	-	-	71	0	0.00	42	17	28.81
GZF1	0	genome.wustl.edu	37	20	23347736	23347739	+	Splice_Site	DEL	TAAA	TAAA	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	TAAA	TAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	20	23347736	23347739	TAAA	-	DEL	GZF1	ENST00000338121	human	ensembl	74_37	+1	known	splice_site_del	c.1459+2_1459+1	e2+2	1.000:0.985:0.952:0.847	-	-	-	no_errors	GZF1	HGNC	ENSG00000125812	tier1			49	0	0.00	31	12	27.91
HCP5	0	genome.wustl.edu	37	6	31431702	31431703	+	RNA	INS	-	-	TAT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	31431702	31431703	-	TAT	INS	HCP5	ENST00000414046	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.276:0.263	-	-	-	no_errors	HCP5	HGNC	ENSG00000206337	tier1			103	0	0.00	67	12	15.19
HIAT1	0	genome.wustl.edu	37	1	100546214	100546214	+	Missense_Mutation	SNP	A	A	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	100546214	100546214	A	T	SNP	HIAT1	ENST00000370152	human	ensembl	74_37	+1	known	missense	c.1265	p.Q422L	1.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	HIAT1	HGNC	ENSG00000156875	tier1	-	-	122	0	0.00	79	26	24.76
HNRNPL	0	genome.wustl.edu	37	19	39328041	39328042	+	Frame_Shift_Ins	INS	-	-	AATG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	39328041	39328042	-	AATG	INS	HNRNPL	ENST00000221419	human	ensembl	74_37	-1	known	frame_shift_ins	c.1694_1693	p.Y565fs	1.000:1.000	tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPL	HGNC	ENSG00000104824	tier1			40	0	0.00	36	4	10.00
IRF2	0	genome.wustl.edu	37	4	185320123	185320123	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	4	185320123	185320123	C	-	DEL	IRF2	ENST00000393593	human	ensembl	74_37	-1	known	frame_shift_del	c.640	p.V214fs	0.976	pirsf_Interferon_reg_fac-1/2	pfam_Interferon_reg_fact_DNA-bd_dom,smart_Interferon_reg_fact_DNA-bd_dom,pirsf_Interferon_reg_fac-1/2,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF2	HGNC	ENSG00000168310	tier1			77	0	0.00	23	23	50.00
IRF4	0	genome.wustl.edu	37	6	393302	393302	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	393302	393302	C	-	DEL	IRF4	ENST00000380956	human	ensembl	74_37	+1	known	frame_shift_del	c.150	p.R51fs	1.000	pfam_Interferon_reg_fact_DNA-bd_dom,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF4	HGNC	ENSG00000137265	tier1			18	0	0.00	4	2	33.33
KCNH5	0	genome.wustl.edu	37	14	63447637	63447638	+	In_Frame_Ins	INS	-	-	CAG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	63447637	63447638	-	CAG	INS	KCNH5	ENST00000322893	human	ensembl	74_37	-1	known	in_frame_ins	c.895_894	p.298in_frame_insL	1.000:0.993	pfam_Ion_trans_dom,prints_K_chnl_volt-dep_EAG	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH5	HGNC	ENSG00000140015	tier1			51	0	0.00	36	12	25.00
KCNT2	0	genome.wustl.edu	37	1	196197391	196197391	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	196197391	196197391	A	C	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.3371	p.V1124G	0.811	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	65	0	0.00	36	13	26.53
KIAA0391	0	genome.wustl.edu	37	14	35736081	35736082	+	Frame_Shift_Ins	INS	-	-	GTAA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	35736081	35736082	-	GTAA	INS	KIAA0391	ENST00000534898	human	ensembl	74_37	+1	known	frame_shift_ins	c.1424_1425	p.I475fs	1.000:1.000	NULL	NULL	-	no_errors	KIAA0391	HGNC	ENSG00000100890	tier1			77	0	0.00	82	15	15.46
KIFC2	0	genome.wustl.edu	37	8	145697869	145697870	+	Splice_Site	INS	-	-	AG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	145697869	145697870	-	AG	INS	KIFC2	ENST00000301332	human	ensembl	74_37	+1	known	splice_site_ins	c.1731+2_1731+1	e15+2	0.940:0.272	-	-	-	no_errors	KIFC2	HGNC	ENSG00000167702	tier1			28	0	0.00	14	7	33.33
KRBA2	0	genome.wustl.edu	37	17	8273688	8273689	+	Frame_Shift_Ins	INS	-	-	AGCT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	8273688	8273689	-	AGCT	INS	KRBA2	ENST00000331336	human	ensembl	74_37	-1	known	frame_shift_ins	c.243_242	p.S82fs	0.683:0.206	superfamily_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_RNaseH-like_dom,superfamily_Krueppel-associated_box,pfscan_Integrase_cat-core	-	no_errors	KRBA2	HGNC	ENSG00000184619	tier1			73	0	0.00	43	11	20.37
KRT35	0	genome.wustl.edu	37	17	39637118	39637118	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	39637118	39637118	C	T	SNP	KRT35	ENST00000393989	human	ensembl	74_37	-1	known	missense	c.232	p.A78T	0.105	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT35	HGNC	ENSG00000197079	tier1	-	-	45	0	0.00	179	12	6.28
KRT85	0	genome.wustl.edu	37	12	52761107	52761108	+	Frame_Shift_Ins	INS	-	-	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	52761107	52761108	-	T	INS	KRT85	ENST00000257901	human	ensembl	74_37	-1	known	frame_shift_ins	c.83_82	p.T28fs	0.909:0.962	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT85	HGNC	ENSG00000135443	tier1			48	0	0.00	25	2	7.41
KRTAP4-7	0	genome.wustl.edu	37	17	39240627	39240627	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	39240627	39240627	T	C	SNP	KRTAP4-7	ENST00000391417	human	ensembl	74_37	+1	known	missense	c.169	p.S57P	0.032	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-7	HGNC	ENSG00000240871	tier1	rs189343211	-	56	0	0.00	81	20	19.80
KRTAP4-8	0	genome.wustl.edu	37	17	39254054	39254054	+	Missense_Mutation	SNP	A	A	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	39254054	39254054	A	T	SNP	KRTAP4-8	ENST00000333822	human	ensembl	74_37	-1	known	missense	c.283	p.C95S	0.992	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-8	HGNC	ENSG00000204880	tier1	rs76270529	-	44	0	0.00	244	28	10.29
LRRK2	0	genome.wustl.edu	37	12	40619415	40619416	+	Frame_Shift_Ins	INS	-	-	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	40619415	40619416	-	G	INS	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	frame_shift_ins	c.210_211	p.Y70fs	0.050:0.616	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1			47	0	0.00	26	17	39.53
LRRK2	0	genome.wustl.edu	37	12	40619416	40619416	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	40619416	40619416	T	A	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.211	p.Y71N	0.616	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	47	0	0.00	24	17	38.64
LYN	0	genome.wustl.edu	37	8	56864630	56864630	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	56864630	56864630	G	A	SNP	LYN	ENST00000519728	human	ensembl	74_37	+1	known	missense	c.593	p.R198Q	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	LYN	HGNC	ENSG00000254087	tier1	-	-	89	0	0.00	56	52	48.15
MALAT1	0	genome.wustl.edu	37	11	65273297	65273298	+	RNA	INS	-	-	ACAT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	65273297	65273298	-	ACAT	INS	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1			75	0	0.00	62	16	20.51
MAPK6	0	genome.wustl.edu	37	15	52339019	52339020	+	Frame_Shift_Ins	INS	-	-	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	52339019	52339020	-	G	INS	MAPK6	ENST00000261845	human	ensembl	74_37	+1	known	frame_shift_ins	c.362_363	p.L124fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK3/4	-	no_errors	MAPK6	HGNC	ENSG00000069956	tier1			63	0	0.00	43	13	23.21
MED21	0	genome.wustl.edu	37	12	27179396	27179398	+	In_Frame_Del	DEL	GTG	GTG	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	GTG	GTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	27179396	27179398	GTG	-	DEL	MED21	ENST00000282892	human	ensembl	74_37	+1	known	in_frame_del	c.86_88	p.G30in_frame_del	1.000:1.000:1.000	pfam_Mediator_Med21	pfam_Mediator_Med21	-	no_errors	MED21	HGNC	ENSG00000152944	tier1			79	0	0.00	55	21	27.63
MIDN	0	genome.wustl.edu	37	19	1257098	1257098	+	Frame_Shift_Del	DEL	G	G	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	1257098	1257098	G	-	DEL	MIDN	ENST00000300952	human	ensembl	74_37	+1	known	frame_shift_del	c.1234	p.A412fs	1.000	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	MIDN	HGNC	ENSG00000167470	tier1			29	0	0.00	10	9	47.37
MIDN	0	genome.wustl.edu	37	19	1257099	1257099	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	1257099	1257099	C	A	SNP	MIDN	ENST00000300952	human	ensembl	74_37	+1	known	missense	c.1235	p.A412E	1.000	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	MIDN	HGNC	ENSG00000167470	tier1	-	-	30	0	0.00	10	9	47.37
MORC4	0	genome.wustl.edu	37	X	106199760	106199760	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	X	106199760	106199760	G	T	SNP	MORC4	ENST00000355610	human	ensembl	74_37	-1	known	missense	c.1459	p.Q487K	0.989	NULL	pfam_Znf_CW,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Prefoldin,pfscan_Znf_CW	-	no_errors	MORC4	HGNC	ENSG00000133131	tier1	-	-	205	0	0.00	146	38	20.65
MOV10L1	0	genome.wustl.edu	37	22	50580607	50580608	+	Frame_Shift_Ins	INS	-	-	GAGC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	22	50580607	50580608	-	GAGC	INS	MOV10L1	ENST00000262794	human	ensembl	74_37	+1	known	frame_shift_ins	c.2168_2169	p.D725fs	0.000:0.000	NULL	superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold	-	no_errors	MOV10L1	HGNC	ENSG00000073146	tier1			30	0	0.00	13	4	23.53
MRGPRX1	0	genome.wustl.edu	37	11	18956154	18956154	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	18956154	18956154	C	T	SNP	MRGPRX1	ENST00000302797	human	ensembl	74_37	-1	known	missense	c.178	p.A60T	0.008	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRX1	HGNC	ENSG00000170255	tier1	-	-	93	0	0.00	64	29	31.18
MROH1	0	genome.wustl.edu	37	8	145278034	145278034	+	Frame_Shift_Del	DEL	G	G	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	145278034	145278034	G	-	DEL	MROH1	ENST00000326134	human	ensembl	74_37	+1	known	frame_shift_del	c.1239	p.I414fs	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	MROH1	HGNC	ENSG00000179832	tier1			22	0	0.00	25	5	16.67
MRPL37	0	genome.wustl.edu	37	1	54666084	54666085	+	Frame_Shift_Ins	INS	-	-	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	54666084	54666085	-	C	INS	MRPL37	ENST00000360840	human	ensembl	74_37	+1	known	frame_shift_ins	c.168_169	p.I57fs	1.000:1.000	NULL	pfam_Ribosomal_L37/S30	-	no_errors	MRPL37	HGNC	ENSG00000116221	tier1			59	0	0.00	43	14	24.56
MRPL45	0	genome.wustl.edu	37	17	36478056	36478059	+	Frame_Shift_Del	DEL	AGAT	AGAT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	AGAT	AGAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	36478056	36478059	AGAT	0	DEL	MRPL45	ENST00000312513	human	ensembl	74_37	+1	known	frame_shift_del	c.708_711	p.D237fs	1.000:1.000:1.000:1.000	pfam_Tim44-like_dom,smart_Tim44-like_dom	pfam_Tim44-like_dom,smart_Tim44-like_dom	-	no_errors	MRPL45	HGNC	ENSG00000174100				113	0	0.00	224	16	6.67
MTBP	0	genome.wustl.edu	37	8	121457710	121457712	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	121457710	121457712	GAT	-	DEL	MTBP	ENST00000305949	human	ensembl	74_37	+1	known	in_frame_del	c.2_2	p.Y4in_frame_del*	0.174:0.974:1.000	NULL	NULL	-	no_errors	MTBP	HGNC	ENSG00000172167	tier1			72	0	0.00	55	21	27.63
MTBP	0	genome.wustl.edu	37	8	121457713	121457713	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	121457713	121457713	G	C	SNP	MTBP	ENST00000305949	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	1.000	NULL	NULL	-	no_errors	MTBP	HGNC	ENSG00000172167	tier1	-	-	71	0	0.00	51	21	29.17
MTERFD3	0	genome.wustl.edu	37	12	107371502	107371503	+	Frame_Shift_Ins	INS	-	-	TACT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	107371502	107371503	-	TACT	INS	MTERFD3	ENST00000240050	human	ensembl	74_37	-1	known	frame_shift_ins	c.991_990	p.Q330fs	0.983:0.028	pfam_Mit_transcrip_term-rel	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD3	HGNC	ENSG00000120832	tier1			225	0	0.00	150	41	21.47
MUC7	0	genome.wustl.edu	37	4	71347114	71347114	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	4	71347114	71347114	C	T	SNP	MUC7	ENST00000304887	human	ensembl	74_37	+1	known	missense	c.653	p.P218L	0.051	NULL	NULL	-	no_errors	MUC7	HGNC	ENSG00000171195	tier1	-	-	90	0	0.00	72	18	20.00
NCSTN	0	genome.wustl.edu	37	1	160326468	160326468	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	160326468	160326468	A	G	SNP	NCSTN	ENST00000294785	human	ensembl	74_37	+1	known	missense	c.1718	p.N573S	1.000	NULL	pfam_Nicastrin	-	no_errors	NCSTN	HGNC	ENSG00000162736	tier1	-	-	65	0	0.00	49	21	30.00
NEDD9	0	genome.wustl.edu	37	6	11185795	11185795	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	11185795	11185795	G	T	SNP	NEDD9	ENST00000379446	human	ensembl	74_37	-1	known	missense	c.2105	p.A702D	0.005	pfam_CAS_DUF3513	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859	tier1	-	-	67	0	0.00	36	12	25.00
NEDD9	0	genome.wustl.edu	37	6	11185798	11185798	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	11185798	11185798	C	T	SNP	NEDD9	ENST00000379446	human	ensembl	74_37	-1	known	missense	c.2102	p.S701N	0.199	pfam_CAS_DUF3513	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859	tier1	rs146839387	-	66	0	0.00	33	11	24.44
NOD2	0	genome.wustl.edu	37	16	50744629	50744629	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	16	50744629	50744629	G	A	SNP	NOD2	ENST00000300589	human	ensembl	74_37	+1	known	silent	c.807	p.P269	0.001	superfamily_P-loop_NTPase	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD2	HGNC	ENSG00000167207	tier1	-	-	22	0	0.00	15	7	31.82
OR8B2	0	genome.wustl.edu	37	11	124253168	124253168	+	Silent	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	124253168	124253168	C	T	SNP	OR8B2	ENST00000375013	human	ensembl	74_37	-1	known	silent	c.72	p.R24	0.012	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8B2	HGNC	ENSG00000204293	tier1	-	-	244	0	0.00	188	74	28.24
OR9A4	0	genome.wustl.edu	37	7	141619259	141619259	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	7	141619259	141619259	C	T	SNP	OR9A4	ENST00000548136	human	ensembl	74_37	+1	known	missense	c.584	p.T195M	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9A4	HGNC	ENSG00000258083	tier1	-	-	129	0	0.00	70	28	28.57
PBRM1	0	genome.wustl.edu	37	3	52620539	52620540	+	Frame_Shift_Del	DEL	CG	CG	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	CG	CG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	3	52620539	52620540	CG	-	DEL	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	frame_shift_del	c.3289_3288	p.V1097fs	1.000:0.963	NULL	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939	tier1			106	0	0.00	53	10	15.87
PBRM1	0	genome.wustl.edu	37	3	52620544	52620545	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	3	52620544	52620545	AC	-	DEL	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	frame_shift_del	c.3284_3283	p.V1095fs	1.000:1.000	NULL	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939	tier1			100	0	0.00	42	11	20.75
PCDH10	0	genome.wustl.edu	37	4	134072318	134072319	+	Frame_Shift_Ins	INS	-	-	TT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	4	134072318	134072319	-	TT	INS	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	frame_shift_ins	c.1023_1024	p.C341fs	1.000:1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	tier1			104	0	0.00	81	13	13.83
PCDH17	0	genome.wustl.edu	37	13	58208475	58208475	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	13	58208475	58208475	C	T	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.1795	p.R599C	0.950	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	42	0	0.00	31	11	26.19
PCDHA12	0	genome.wustl.edu	37	5	140256803	140256803	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	5	140256803	140256803	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	silent	c.1746	p.P582	0.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	161	0	0.00	93	37	28.46
PCDHGA5	0	genome.wustl.edu	37	5	140745573	140745573	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	5	140745573	140745573	C	T	SNP	PCDHGA5	ENST00000518069	human	ensembl	74_37	+1	known	missense	c.1676	p.T559M	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA5	HGNC	ENSG00000253485	tier1	-	-	178	0	0.00	137	40	22.60
PCM1	0	genome.wustl.edu	37	8	17794817	17794817	+	Nonsense_Mutation	SNP	C	C	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	17794817	17794817	C	T	SNP	PCM1	ENST00000325083	human	ensembl	74_37	+1	known	nonsense	c.271	p.Q91*	1.000	NULL	NULL	-	no_errors	PCM1	HGNC	ENSG00000078674	tier1	-	-	16	0	0.00	15	5	25.00
PCSK1	0	genome.wustl.edu	37	5	95746490	95746490	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	5	95746490	95746490	G	A	SNP	PCSK1	ENST00000311106	human	ensembl	74_37	-1	known	silent	c.1083	p.T361	0.962	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,pfam_Proho_convert,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK1	HGNC	ENSG00000175426	tier1	-	-	102	0	0.00	73	17	18.89
PEX3	0	genome.wustl.edu	37	6	143780224	143780225	+	Frame_Shift_Ins	INS	-	-	TATA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	143780224	143780225	-	TATA	INS	PEX3	ENST00000367591	human	ensembl	74_37	+1	known	frame_shift_ins	c.76_77	p.L29fs	1.000:1.000	pfam_Peroxin-3	pfam_Peroxin-3	-	no_errors	PEX3	HGNC	ENSG00000034693	tier1			40	0	0.00	31	7	18.42
PIFO	0	genome.wustl.edu	37	1	111890366	111890367	+	Frame_Shift_Ins	INS	-	-	AGCT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	111890366	111890367	-	AGCT	INS	PIFO	ENST00000369738	human	ensembl	74_37	+1	known	frame_shift_ins	c.230_231	p.V79fs	0.984:0.142	NULL	NULL	-	no_errors	PIFO	HGNC	ENSG00000173947	tier1			80	0	0.00	63	9	12.50
PITPNM1	0	genome.wustl.edu	37	11	67265104	67265105	+	Frame_Shift_Ins	INS	-	-	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	67265104	67265105	-	G	INS	PITPNM1	ENST00000356404	human	ensembl	74_37	-1	known	frame_shift_ins	c.1829_1828	p.L610fs	1.000:1.000	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697	tier1			88	0	0.00	65	20	23.53
PKD2L2	0	genome.wustl.edu	37	5	137259161	137259164	+	Frame_Shift_Del	DEL	ATTC	ATTC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	ATTC	ATTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	5	137259161	137259164	ATTC	-	DEL	PKD2L2	ENST00000508883	human	ensembl	74_37	+1	known	frame_shift_del	c.1502_1505	p.Y501fs	0.998:0.998:0.997:0.999	NULL	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2	-	no_errors	PKD2L2	HGNC	ENSG00000078795	tier1			154	0	0.00	109	10	8.40
POLG	0	genome.wustl.edu	37	15	89876827	89876828	+	In_Frame_Ins	INS	-	-	TGC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	89876827	89876828	-	TGC	INS	POLG	ENST00000268124	human	ensembl	74_37	-1	known	in_frame_ins	c.159_158	p.56in_frame_insQ	0.004:0.005	pirsf_DNA-dir_DNA_pol_A_mt_sub	pirsf_DNA-dir_DNA_pol_A_mt_sub,pfam_DNA-dir_DNA_pol_A_palm_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_A_palm_dom,prints_DNA-dir_DNA_pol_A_mt	-	no_errors	POLG	HGNC	ENSG00000140521	tier1			17	0	0.00	10	3	23.08
POM121	0	genome.wustl.edu	37	7	72416125	72416125	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	7	72416125	72416125	G	A	SNP	POM121	ENST00000434423	human	ensembl	74_37	+1	known	missense	c.3530	p.G1177D	0.970	NULL	NULL	-	no_errors	POM121	HGNC	ENSG00000196313	tier1	-	-	37	0	0.00	26	4	13.33
PREX1	0	genome.wustl.edu	37	20	47259053	47259054	+	RNA	INS	-	-	TCAG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	20	47259053	47259054	-	TCAG	INS	PREX1	ENST00000496915	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005:0.114	-	-	-	no_errors	PREX1	HGNC	ENSG00000124126	tier1			26	0	0.00	20	5	20.00
PRIM2	0	genome.wustl.edu	37	6	57393160	57393160	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	57393160	57393160	G	A	SNP	PRIM2	ENST00000607273	human	ensembl	74_37	+1	known	silent	c.810	p.K270	1.000	pfam_DNA_primase_lsu_euk/arc	pfam_DNA_primase_lsu_euk/arc	-	no_errors	PRIM2	HGNC	ENSG00000146143	tier1	rs76686926	-	14	0	0.00	7	6	46.15
PRMT3	0	genome.wustl.edu	37	11	20417463	20417463	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	20417463	20417463	C	A	SNP	PRMT3	ENST00000331079	human	ensembl	74_37	+1	known	missense	c.515	p.A172D	1.000	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_mo5U34_MeTrfas-like,pfam_Methyltransf_11,pfam_Arg_MeTrfase,pfam_Small_mtfrase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT3	HGNC	ENSG00000185238	tier1	-	-	105	0	0.00	70	9	11.25
PSMB3	0	genome.wustl.edu	37	17	36909536	36909537	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	36909536	36909537	GT	-	DEL	PSMB3	ENST00000225426	human	ensembl	74_37	+1	known	frame_shift_del	c.137_138	p.D47fs	0.999:0.242	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b	-	no_errors	PSMB3	HGNC	ENSG00000108294	tier1			58	0	0.00	67	8	10.67
PTEN	0	genome.wustl.edu	37	10	89720779	89720780	+	Frame_Shift_Ins	INS	-	-	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	10	89720779	89720780	-	C	INS	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	frame_shift_ins	c.930_931	p.N310fs	1.000:1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	tier1			134	0	0.00	77	32	29.36
PVRL2	0	genome.wustl.edu	37	19	45377717	45377717	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	45377717	45377717	C	A	SNP	PVRL2	ENST00000252483	human	ensembl	74_37	+1	known	missense	c.1024	p.Q342K	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL2	HGNC	ENSG00000130202	tier1	-	-	34	0	0.00	30	8	21.05
RALGPS2	0	genome.wustl.edu	37	1	178858804	178858805	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	178858804	178858805	-	AG	INS	RALGPS2	ENST00000367635	human	ensembl	74_37	+1	known	frame_shift_ins	c.1220_1221	p.T409fs	1.000:1.000	NULL	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_RasGRF_CDC25	-	no_errors	RALGPS2	HGNC	ENSG00000116191	tier1			117	0	0.00	102	19	15.70
RFXANK	0	genome.wustl.edu	37	19	19308961	19308962	+	In_Frame_Ins	INS	-	-	AGC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	19308961	19308962	-	AGC	INS	RFXANK	ENST00000303088	human	ensembl	74_37	+1	known	in_frame_ins	c.484_485	p.SLAS162in_frame_ins*	1.000:0.999	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_DNA-bd_RFXANK,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_DNA-bd_RFXANK,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	RFXANK	HGNC	ENSG00000064490	tier1			79	0	0.00	38	9	19.15
RGS2	0	genome.wustl.edu	37	1	192778212	192778213	+	Frame_Shift_Ins	INS	-	-	TA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	192778212	192778213	-	TA	INS	RGS2	ENST00000235382	human	ensembl	74_37	+1	known	frame_shift_ins	c.11_12	p.M5fs	0.991:0.948	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS2	HGNC	ENSG00000116741	tier1			64	0	0.00	34	12	26.09
RLF	0	genome.wustl.edu	37	1	40705774	40705777	+	Frame_Shift_Del	DEL	TTCT	TTCT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	TTCT	TTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	40705774	40705777	TTCT	-	DEL	RLF	ENST00000372771	human	ensembl	74_37	+1	known	frame_shift_del	c.5400_5403	p.S1801fs	0.791:0.888:0.999:0.999	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RLF	HGNC	ENSG00000117000	tier1			76	0	0.00	71	13	15.48
RNF111	0	genome.wustl.edu	37	15	59347956	59347956	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	59347956	59347956	G	A	SNP	RNF111	ENST00000434298	human	ensembl	74_37	+1	known	silent	c.1083	p.E361	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF111	HGNC	ENSG00000157450	tier1	-	-	43	0	0.00	48	10	17.24
RNF20	0	genome.wustl.edu	37	9	104313017	104313017	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	104313017	104313017	C	G	SNP	RNF20	ENST00000389120	human	ensembl	74_37	+1	known	missense	c.1222	p.L408V	1.000	NULL	superfamily_STAT_TF_coiled-coil,superfamily_Prefoldin,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF20	HGNC	ENSG00000155827	tier1	-	-	142	0	0.00	103	19	15.57
RPL24	0	genome.wustl.edu	37	3	101404713	101404713	+	Silent	SNP	C	C	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	3	101404713	101404713	C	G	SNP	RPL24	ENST00000394077	human	ensembl	74_37	-1	known	silent	c.141	p.R47	1.000	pfam_Ribosomal_L24e_rel	pfam_Ribosomal_L24e_rel,smart_TRASH_dom	-	no_errors	RPL24	HGNC	ENSG00000114391	tier1	-	-	157	0	0.00	133	35	20.83
RPP25L	0	genome.wustl.edu	37	9	34611089	34611090	+	Frame_Shift_Ins	INS	-	-	GACA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	34611089	34611090	-	GACA	INS	RPP25L	ENST00000297613	human	ensembl	74_37	-1	known	frame_shift_ins	c.205_204	p.S68fs	1.000:1.000	pfam_DNA/RNA-bd_Alba-like	pfam_DNA/RNA-bd_Alba-like	-	no_errors	RPP25L	HGNC	ENSG00000164967	tier1			38	0	0.00	25	3	10.71
RPRD2	0	genome.wustl.edu	37	1	150445772	150445772	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	150445772	150445772	T	G	SNP	RPRD2	ENST00000369068	human	ensembl	74_37	+1	known	missense	c.4348	p.F1450V	1.000	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,superfamily_Ricin_B_lectin,smart_CID_dom	-	no_errors	RPRD2	HGNC	ENSG00000163125	tier1	-	-	83	0	0.00	58	18	23.68
SAV1	0	genome.wustl.edu	37	14	51132284	51132285	+	In_Frame_Ins	INS	-	-	ATC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	51132284	51132285	-	ATC	INS	SAV1	ENST00000324679	human	ensembl	74_37	-1	known	in_frame_ins	c.148_147	p.49in_frame_insD	1.000:1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_SARAH_dom,pfscan_WW_dom	-	no_errors	SAV1	HGNC	ENSG00000151748	tier1			53	0	0.00	44	12	21.43
SCN3A	0	genome.wustl.edu	37	2	166021007	166021008	+	Frame_Shift_Ins	INS	-	-	TA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	2	166021007	166021008	-	TA	INS	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	frame_shift_ins	c.497_496	p.T166fs	1.000:1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN3A	HGNC	ENSG00000153253	tier1			34	0	0.00	35	10	22.22
SEC16A	0	genome.wustl.edu	37	9	139362892	139362892	+	Silent	SNP	A	A	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	139362892	139362892	A	G	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	silent	c.3777	p.Y1259	0.008	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396	tier1	-	-	82	0	0.00	57	21	26.92
SETBP1	0	genome.wustl.edu	37	18	42449206	42449207	+	Frame_Shift_Ins	INS	-	-	AGTG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	18	42449206	42449207	-	AGTG	INS	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	frame_shift_ins	c.498_499	p.D167fs	1.000:1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217	tier1			152	0	0.00	128	13	9.22
SH2D4A	0	genome.wustl.edu	37	8	19250920	19250921	+	Frame_Shift_Ins	INS	-	-	TA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	8	19250920	19250921	-	TA	INS	SH2D4A	ENST00000265807	human	ensembl	74_37	+1	known	frame_shift_ins	c.1140_1141	p.A381fs	1.000:1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	SH2D4A	HGNC	ENSG00000104611	tier1			101	0	0.00	49	18	26.87
SLC2A6	0	genome.wustl.edu	37	9	136337221	136337222	+	In_Frame_Ins	INS	-	-	CAG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	136337221	136337222	-	CAG	INS	SLC2A6	ENST00000371899	human	ensembl	74_37	-1	known	in_frame_ins	c.1446_1445	p.483in_frame_insC	0.644:0.990	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A6	HGNC	ENSG00000160326	tier1			62	0	0.00	37	15	28.85
SLC30A7	0	genome.wustl.edu	37	1	101362205	101362206	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	101362205	101362206	CT	-	DEL	SLC30A7	ENST00000357650	human	ensembl	74_37	+1	novel	frame_shift_del	c.160_161	p.Y55fs	0.920:0.946	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A7	HGNC	ENSG00000162695	tier1			56	0	0.00	34	12	26.09
SNAPC4	0	genome.wustl.edu	37	9	139275294	139275294	+	Silent	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	139275294	139275294	G	A	SNP	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	silent	c.2397	p.H799	0.999	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684	tier1	-	-	37	0	0.00	19	7	26.92
SNORA3	0	genome.wustl.edu	37	11	8705833	8705834	+	RNA	INS	-	-	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	11	8705833	8705834	-	G	INS	SNORA3	ENST00000364113	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999:0.998	-	-	-	no_errors	SNORA3	HGNC	ENSG00000200983	tier1			149	0	0.00	124	34	21.52
SOCS7	0	genome.wustl.edu	37	17	36523899	36523899	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	36523899	36523899	T	0	DEL	SOCS7	ENST00000577233	human	ensembl	74_37	+1	known	frame_shift_del	c.1326	p.I443fs	0.992	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS7	HGNC	ENSG00000174111				60	0	0.00	87	9	9.38
SP100	0	genome.wustl.edu	37	2	231308929	231308930	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	2	231308929	231308930	-	AG	INS	SP100	ENST00000340126	human	ensembl	74_37	+1	known	frame_shift_ins	c.307_308	p.V105fs	0.000:0.000	pfam_Sp100	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP100	HGNC	ENSG00000067066	tier1			127	0	0.00	84	28	25.00
SRCIN1	0	genome.wustl.edu	37	17	36719075	36719078	+	Frame_Shift_Del	DEL	GTTG	GTTG	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	GTTG	GTTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	36719075	36719078	GTTG	-	DEL	SRCIN1	ENST00000264659	human	ensembl	74_37	-1	known	frame_shift_del	c.822_819	p.N274fs	1.000:1.000:1.000:1.000	NULL	pfam_AIP3_C	-	no_errors	SRCIN1	HGNC	ENSG00000017373	tier1			36	0	0.00	42	6	12.50
SSBP1	0	genome.wustl.edu	37	7	141438992	141438993	+	Splice_Site	INS	-	-	AGTC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	7	141438992	141438993	-	AGTC	INS	SSBP1	ENST00000265304	human	ensembl	74_37	+1	known	splice_site_ins	c.24+2_24+1	e1+2	0.999:0.917	-	-	-	no_errors	SSBP1	HGNC	ENSG00000106028	tier1			136	0	0.00	125	17	11.97
STX1A	0	genome.wustl.edu	37	7	73118740	73118741	+	Frame_Shift_Ins	INS	-	-	GACT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	7	73118740	73118741	-	GACT	INS	STX1A	ENST00000222812	human	ensembl	74_37	-1	known	frame_shift_ins	c.297_296	p.I100fs	1.000:1.000	pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX1A	HGNC	ENSG00000106089	tier1			56	0	0.00	36	13	26.53
SYNPO2	0	genome.wustl.edu	37	4	119951944	119951944	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	4	119951944	119951944	G	T	SNP	SYNPO2	ENST00000307142	human	ensembl	74_37	+1	known	nonsense	c.2014	p.E672*	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2	HGNC	ENSG00000172403	tier1	-	-	44	0	0.00	26	11	29.73
SZT2	0	genome.wustl.edu	37	1	43916082	43916082	+	Silent	SNP	C	C	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	43916082	43916082	C	G	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	silent	c.10059	p.V3353	0.993	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198	tier1	-	-	95	0	0.00	53	9	14.52
TCF20	0	genome.wustl.edu	37	22	42610776	42610778	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	22	42610776	42610778	TGC	-	DEL	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	in_frame_del	c.536_534	p.Q179in_frame_del	1.000:1.000:1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	tier1			76	0	0.00	32	4	11.11
TET1	0	genome.wustl.edu	37	10	70332153	70332153	+	Frame_Shift_Del	DEL	A	A	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	10	70332153	70332153	A	-	DEL	TET1	ENST00000373644	human	ensembl	74_37	+1	known	frame_shift_del	c.58	p.K22fs	0.855	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	tier1			32	0	0.00	14	2	12.50
TGM7	0	genome.wustl.edu	37	15	43585724	43585725	+	Frame_Shift_Ins	INS	-	-	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	43585724	43585725	-	G	INS	TGM7	ENST00000452443	human	ensembl	74_37	-1	known	frame_shift_ins	c.116_115	p.Q39fs	0.998:1.000	pfam_Transglutaminase_N,superfamily_Ig_E-set	pfam_Transglutaminase_N,pfam_Transglutaminase_C,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM7	HGNC	ENSG00000159495	tier1			136	0	0.00	92	20	17.86
TIE1	0	genome.wustl.edu	37	1	43782996	43782996	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	43782996	43782996	G	A	SNP	TIE1	ENST00000372476	human	ensembl	74_37	+1	known	missense	c.2536	p.G846R	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TIE1	HGNC	ENSG00000066056	tier1	-	-	70	0	0.00	39	6	13.33
TNFRSF8	0	genome.wustl.edu	37	1	12157225	12157228	+	Frame_Shift_Del	DEL	CTAC	CTAC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	CTAC	CTAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	12157225	12157228	CTAC	-	DEL	TNFRSF8	ENST00000263932	human	ensembl	74_37	+1	known	frame_shift_del	c.219_222	p.Y74fs	0.948:0.945:0.941:0.866	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_8	-	no_errors	TNFRSF8	HGNC	ENSG00000120949	tier1			43	0	0.00	31	7	18.42
TNFRSF8	0	genome.wustl.edu	37	1	12157232	12157233	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	12157232	12157233	GA	-	DEL	TNFRSF8	ENST00000263932	human	ensembl	74_37	+1	known	frame_shift_del	c.226_227	p.D76fs	0.000:0.000	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_8	-	no_errors	TNFRSF8	HGNC	ENSG00000120949	tier1			37	0	0.00	28	7	20.00
TOP2A	0	genome.wustl.edu	37	17	38560458	38560458	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	38560458	38560458	C	A	SNP	TOP2A	ENST00000423485	human	ensembl	74_37	-1	known	missense	c.2229	p.K743N	1.000	pfam_Topo_IIA_A/C,superfamily_Topo_IIA_like_dom,smart_Topo_IIA_A/C,prints_TopoII_euk	pfam_Topo_IIA_A/C,pfam_Topo_IIA_bsu_dom2,pfam_DTHCT,pfam_HATPase_ATP-bd,superfamily_Topo_IIA_like_dom,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_Topo_IIA,smart_Topo_IIA_A/C,prints_TopoII_euk,prints_Topo_IIA,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	TOP2A	HGNC	ENSG00000131747	tier1	-	-	180	0	0.00	324	41	11.23
TP53	0	genome.wustl.edu	37	17	7577565	7577566	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	7577565	7577566	TT	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	frame_shift_del	c.716_715	p.N239fs	1.000:1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1			79	0	0.00	30	9	23.08
TP53BP1	0	genome.wustl.edu	37	15	43783889	43783890	+	Frame_Shift_Ins	INS	-	-	TAAC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	43783889	43783890	-	TAAC	INS	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	frame_shift_ins	c.349_348	p.P116fs	1.000:1.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369	tier1			211	0	0.00	116	28	19.44
TRIM15	0	genome.wustl.edu	37	6	30131658	30131659	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	30131658	30131659	-	AG	INS	TRIM15	ENST00000376694	human	ensembl	74_37	+1	known	frame_shift_ins	c.197_198	p.T68fs	0.000:0.000	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM15	HGNC	ENSG00000204610	tier1			35	0	0.00	12	4	25.00
TRIM28	0	genome.wustl.edu	37	19	59060419	59060420	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	59060419	59060420	-	A	INS	TRIM28	ENST00000253024	human	ensembl	74_37	+1	known	frame_shift_ins	c.1474_1475	p.R492fs	1.000:1.000	NULL	pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	TRIM28	HGNC	ENSG00000130726	tier1			34	0	0.00	17	5	22.73
TRIM40	0	genome.wustl.edu	37	6	30115318	30115321	+	Frame_Shift_Del	DEL	AGGT	AGGT	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	AGGT	AGGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	6	30115318	30115321	AGGT	-	DEL	TRIM40	ENST00000376724	human	ensembl	74_37	+1	known	frame_shift_del	c.688_689	p.R230fs	0.966:0.998	NULL	pfam_Znf_C3HC4_RING-type,superfamily_tRNA-bd_arm,smart_Znf_RING,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM40	HGNC	ENSG00000204614	tier1			112	0	0.00	51	12	19.05
TSR2	0	genome.wustl.edu	37	X	54470970	54470970	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	X	54470970	54470970	G	T	SNP	TSR2	ENST00000375151	human	ensembl	74_37	+1	known	missense	c.563	p.R188L	1.000	NULL	pfam_Pre-rRNA_process_TSR2	-	no_errors	TSR2	HGNC	ENSG00000158526	tier1	-	-	44	0	0.00	26	4	13.33
TUBGCP6	0	genome.wustl.edu	37	22	50682868	50682869	+	Frame_Shift_Ins	INS	-	-	AGCT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	22	50682868	50682869	-	AGCT	INS	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	frame_shift_ins	c.21_20	p.F8fs	1.000:1.000	NULL	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159	tier1			20	0	0.00	11	6	35.29
UBE2Z	0	genome.wustl.edu	37	17	46988208	46988209	+	Frame_Shift_Ins	INS	-	-	GTTC			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	46988208	46988209	-	GTTC	INS	UBE2Z	ENST00000360943	human	ensembl	74_37	+1	known	frame_shift_ins	c.356_357	p.V122fs	1.000:1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2Z	HGNC	ENSG00000159202	tier1			201	0	0.00	173	38	18.01
UNC79	0	genome.wustl.edu	37	14	94121677	94121678	+	In_Frame_Ins	INS	-	-	TAG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	14	94121677	94121678	-	TAG	INS	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	in_frame_ins	c.6563_6564	p.2191in_frame_insS	1.000:0.697	superfamily_ARM-type_fold	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958	tier1			206	0	0.00	149	44	22.80
URM1	0	genome.wustl.edu	37	9	131151586	131151587	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	9	131151586	131151587	-	TG	INS	URM1	ENST00000452446	human	ensembl	74_37	+1	known	frame_shift_ins	c.235_236	p.V80fs	1.000:1.000	NULL	pfam_Urm1,superfamily_Mopterin_synth/thiamin_S_b	-	no_errors	URM1	HGNC	ENSG00000167118	tier1			60	0	0.00	27	10	27.03
VCX3B	0	genome.wustl.edu	37	X	8433557	8433557	+	Silent	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	X	8433557	8433557	C	A	SNP	VCX3B	ENST00000444481	human	ensembl	74_37	+1	known	silent	c.66	p.S22	0.004	NULL	NULL	-	no_errors	VCX3B	HGNC	ENSG00000205642	tier1	-	-	155	0	0.00	110	20	15.38
VEZF1	0	genome.wustl.edu	37	17	56060137	56060140	+	Frame_Shift_Del	DEL	CATC	CATC	-			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	CATC	CATC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	17	56060137	56060140	CATC	0	DEL	VEZF1	ENST00000581208	human	ensembl	74_37	-1	known	frame_shift_del	c.651_648	p.M217fs	1.000:1.000:1.000:1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	VEZF1	HGNC	ENSG00000136451				50	0	0.00	57	6	9.52
VSIG1	0	genome.wustl.edu	37	X	107316531	107316532	+	In_Frame_Ins	INS	-	-	TTA			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	X	107316531	107316532	-	TTA	INS	VSIG1	ENST00000415430	human	ensembl	74_37	+1	known	in_frame_ins	c.728_729	p.246in_frame_insY	1.000:0.997	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	VSIG1	HGNC	ENSG00000101842	tier1			419	0	0.00	353	84	19.22
WDFY1	0	genome.wustl.edu	37	2	224743393	224743393	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	2	224743393	224743393	G	A	SNP	WDFY1	ENST00000233055	human	ensembl	74_37	-1	known	missense	c.1228	p.H410Y	0.995	NULL	pfam_WD40_repeat,pfam_Znf_FYVE,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,smart_WD40_repeat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDFY1	HGNC	ENSG00000085449	tier1	-	-	35	0	0.00	24	8	25.00
WFS1	0	genome.wustl.edu	37	4	6302945	6302945	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	4	6302945	6302945	C	A	SNP	WFS1	ENST00000226760	human	ensembl	74_37	+1	known	missense	c.1423	p.P475T	1.000	NULL	NULL	-	no_errors	WFS1	HGNC	ENSG00000109501	tier1	-	-	48	0	0.00	44	14	24.14
XXYLT1	0	genome.wustl.edu	37	3	194991489	194991490	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	3	194991489	194991490	-	GG	INS	XXYLT1	ENST00000310380	human	ensembl	74_37	-1	known	frame_shift_ins	c.299_298	p.H100fs	1.000:1.000	NULL	pfam_Glyco_trans_8	-	no_errors	XXYLT1	HGNC	ENSG00000173950	tier1			23	0	0.00	23	3	11.54
YBX3	0	genome.wustl.edu	37	12	10868335	10868335	+	Silent	SNP	T	T	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	12	10868335	10868335	T	C	SNP	YBX3	ENST00000228251	human	ensembl	74_37	-1	known	silent	c.408	p.G136	0.698	pfam_CSP_DNA-bd,superfamily_NA-bd_OB-fold,smart_Cold_shock_prot,prints_CSP_DNA-bd	pfam_CSP_DNA-bd,superfamily_NA-bd_OB-fold,smart_Cold_shock_prot,prints_CSP_DNA-bd	-	no_errors	YBX3	HGNC	ENSG00000060138	tier1	-	-	85	0	0.00	58	23	28.40
ZFP14	0	genome.wustl.edu	37	19	36832189	36832190	+	In_Frame_Ins	INS	-	-	TCT			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	36832189	36832190	-	TCT	INS	ZFP14	ENST00000270001	human	ensembl	74_37	-1	known	in_frame_ins	c.539_538	p.180in_frame_insK	0.743:0.782	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP14	HGNC	ENSG00000142065	tier1			140	0	0.00	142	23	13.94
ZMYND12	0	genome.wustl.edu	37	1	42905657	42905658	+	Frame_Shift_Ins	INS	-	-	G			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	1	42905657	42905658	0	G	INS	ZMYND12	ENST00000372565	human	ensembl	74_37	-1	known	frame_shift_ins	c.464_463	p.Q155fs	1.000:1.000	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND12	HGNC	ENSG00000066185				94	0	0.00	90	9	9.09
ZNF248	0	genome.wustl.edu	37	10	38121464	38121465	+	In_Frame_Ins	INS	-	-	CTG			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	10	38121464	38121465	-	CTG	INS	ZNF248	ENST00000357328	human	ensembl	74_37	-1	known	in_frame_ins	c.819_818	p.274in_frame_insS	0.799:0.814	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF248	HGNC	ENSG00000198105	tier1			107	0	0.00	93	21	18.42
ZNF280D	0	genome.wustl.edu	37	15	56958914	56958914	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	15	56958914	56958914	T	C	SNP	ZNF280D	ENST00000267807	human	ensembl	74_37	-1	known	missense	c.1816	p.K606E	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280D	HGNC	ENSG00000137871	tier1	-	-	56	0	0.00	53	15	22.06
ZNF544	0	genome.wustl.edu	37	19	58773442	58773442	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	19	58773442	58773442	A	C	SNP	ZNF544	ENST00000269829	human	ensembl	74_37	+1	known	missense	c.1470	p.K490N	0.946	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF544	HGNC	ENSG00000198131	tier1	-	-	103	0	0.00	87	18	17.14
ZNRF3	0	genome.wustl.edu	37	22	29446678	29446678	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8DL-01A-11D-A364-08	TCGA-VQ-A8DL-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d45d7fff-d7b2-42f1-b3d5-98a42d632967	783a1259-e426-489b-a4bb-aff944a6790a	22	29446678	29446678	G	C	SNP	ZNRF3	ENST00000544604	human	ensembl	74_37	+1	known	missense	c.2509	p.D837H	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF3	HGNC	ENSG00000183579	tier1	-	-	20	0	0.00	20	5	20.00
