Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ADRA2C	0	genome.wustl.edu	37	4	3768801	3768801	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	4	3768801	3768801	C	T	SNP	ADRA2C	ENST00000330055	human	ensembl	74_37	+1	known	silent	c.468	p.A156	0.945	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA2C_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRA2C	HGNC	ENSG00000184160	tier1	-	-	73	0	0.00	27	11	28.95
AHNAK	0	genome.wustl.edu	37	11	62291191	62291191	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	62291191	62291191	G	A	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	silent	c.10698	p.P3566	0.983	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	tier1	-	-	258	0	0.00	136	54	28.27
AKAP6	0	genome.wustl.edu	37	14	33014440	33014440	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	14	33014440	33014440	G	A	SNP	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	missense	c.581	p.R194Q	1.000	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320	tier1	-	-	117	0	0.00	46	23	33.33
AP4E1	0	genome.wustl.edu	37	15	51221244	51221244	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	15	51221244	51221244	A	G	SNP	AP4E1	ENST00000261842	human	ensembl	74_37	+1	known	missense	c.581	p.K194R	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_bsu_C,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	-	no_errors	AP4E1	HGNC	ENSG00000081014	tier1	-	-	86	0	0.00	61	8	11.59
APOB	0	genome.wustl.edu	37	2	21228760	21228760	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	21228760	21228760	G	A	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	silent	c.10980	p.D3660	0.001	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	57	0	0.00	43	9	17.31
ARMC2	0	genome.wustl.edu	37	6	109220981	109220981	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	6	109220981	109220981	G	A	SNP	ARMC2	ENST00000392644	human	ensembl	74_37	+1	known	missense	c.833	p.R278H	0.866	NULL	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ARMC2	HGNC	ENSG00000118690	tier1	-	-	27	0	0.00	22	4	15.38
ATRN	0	genome.wustl.edu	37	20	3543010	3543010	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	20	3543010	3543010	G	A	SNP	ATRN	ENST00000262919	human	ensembl	74_37	+1	known	missense	c.1535	p.R512K	0.149	NULL	pfam_Kelch_1,pfam_Plexin_repeat,pfam_CUB_dom,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRN	HGNC	ENSG00000088812	tier1	-	-	163	0	0.00	243	17	6.51
BATF2	0	genome.wustl.edu	37	11	64757255	64757255	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	64757255	64757255	G	A	SNP	BATF2	ENST00000301887	human	ensembl	74_37	-1	known	silent	c.171	p.L57	0.151	pfam_bZIP,smart_bZIP,pfscan_bZIP	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	BATF2	HGNC	ENSG00000168062	tier1	-	-	38	0	0.00	40	9	18.37
BCAM	0	genome.wustl.edu	37	19	45316790	45316790	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	45316790	45316790	G	A	SNP	BCAM	ENST00000270233	human	ensembl	74_37	+1	known	missense	c.697	p.A233T	0.931	pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BCAM	HGNC	ENSG00000187244	tier1	-	-	62	0	0.00	38	18	31.58
C10orf137	0	genome.wustl.edu	37	10	127424321	127424321	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	10	127424321	127424321	A	G	SNP	C10orf137	ENST00000356792	human	ensembl	74_37	+1	known	missense	c.1606	p.S536G	1.000	NULL	NULL	-	no_errors	C10orf137	HGNC	ENSG00000107938	tier1	-	-	96	0	0.00	61	6	8.96
C11orf84	0	genome.wustl.edu	37	11	63586445	63586445	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	63586445	63586445	G	A	SNP	C11orf84	ENST00000294244	human	ensembl	74_37	+1	known	missense	c.905	p.G302D	0.001	NULL	NULL	-	no_errors	C11orf84	HGNC	ENSG00000168005	tier1	-	-	46	0	0.00	31	12	27.91
C7orf63	0	genome.wustl.edu	37	7	89929259	89929259	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	7	89929259	89929259	G	A	SNP	C7orf63	ENST00000389297	human	ensembl	74_37	+1	known	missense	c.1936	p.V646I	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792	tier1	-	-	53	0	0.00	38	7	15.56
CADM1	0	genome.wustl.edu	37	11	115102201	115102201	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	115102201	115102201	C	T	SNP	CADM1	ENST00000452722	human	ensembl	74_37	-1	known	missense	c.434	p.R145H	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like_dom	-	no_errors	CADM1	HGNC	ENSG00000182985	tier1	-	-	143	0	0.00	58	44	43.14
CATSPERD	0	genome.wustl.edu	37	19	5776311	5776311	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	5776311	5776311	T	A	SNP	CATSPERD	ENST00000381624	human	ensembl	74_37	+1	known	missense	c.2081	p.V694E	0.939	NULL	superfamily_WD40_repeat_dom	-	no_errors	CATSPERD	HGNC	ENSG00000174898	tier1	-	-	33	0	0.00	32	4	11.11
CBX6	0	genome.wustl.edu	37	22	39262839	39262839	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	22	39262839	39262839	C	T	SNP	CBX6	ENST00000407418	human	ensembl	74_37	-1	known	missense	c.614	p.R205Q	0.997	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX6	HGNC	ENSG00000183741	tier1	-	-	76	0	0.00	39	20	33.90
CGNL1	0	genome.wustl.edu	37	15	57730382	57730382	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	15	57730382	57730382	G	A	SNP	CGNL1	ENST00000281282	human	ensembl	74_37	+1	known	missense	c.185	p.R62Q	0.985	NULL	pfam_Myosin_tail,prints_Tropomyosin	-	no_errors	CGNL1	HGNC	ENSG00000128849	tier1	-	-	74	0	0.00	53	14	20.90
CHDC2	0	genome.wustl.edu	37	X	36156550	36156550	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	X	36156550	36156550	T	G	SNP	CHDC2	ENST00000313548	human	ensembl	74_37	+1	known	missense	c.1229	p.L410R	0.009	pfam_CH-domain	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain	-	no_errors	CHDC2	HGNC	ENSG00000176034	tier1	-	-	71	0	0.00	29	13	30.95
CLP1	0	genome.wustl.edu	37	11	57428712	57428712	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	57428712	57428712	T	C	SNP	CLP1	ENST00000525602	human	ensembl	74_37	+1	known	missense	c.1082	p.M361T	1.000	pfam_Pre-mRNA_cleavage_cplxII_Clp1	pfam_Pre-mRNA_cleavage_cplxII_Clp1,superfamily_P-loop_NTPase	-	no_errors	CLP1	HGNC	ENSG00000172409	tier1	-	-	91	0	0.00	41	13	24.07
COL7A1	0	genome.wustl.edu	37	3	48618753	48618753	+	Silent	SNP	T	T	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	48618753	48618753	T	A	SNP	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	silent	c.4839	p.G1613	0.996	NULL	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270	tier1	-	-	28	0	0.00	15	4	21.05
CWH43	0	genome.wustl.edu	37	4	49046859	49046859	+	Silent	SNP	G	G	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	4	49046859	49046859	G	C	SNP	CWH43	ENST00000226432	human	ensembl	74_37	+1	known	silent	c.1860	p.L620	1.000	superfamily_Endo/exonuclease/phosphatase	superfamily_Endo/exonuclease/phosphatase	-	no_errors	CWH43	HGNC	ENSG00000109182	tier1	-	-	232	0	0.00	127	11	7.97
DAB2IP	0	genome.wustl.edu	37	9	124519371	124519371	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	9	124519371	124519371	G	A	SNP	DAB2IP	ENST00000408936	human	ensembl	74_37	+1	known	missense	c.442	p.D148N	1.000	smart_Pleckstrin_homology	pfam_DUF3498,pfam_RasGAP,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	DAB2IP	HGNC	ENSG00000136848				49	0	0.00	15	3	16.67
DAPK3	0	genome.wustl.edu	37	19	3961031	3961031	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	3961031	3961031	C	T	SNP	DAPK3	ENST00000301264	human	ensembl	74_37	-1	known	missense	c.758	p.R253H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DAPK3	HGNC	ENSG00000167657	tier1	-	-	77	0	0.00	50	9	15.25
DDX4	0	genome.wustl.edu	37	5	55088578	55088578	+	Nonsense_Mutation	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	55088578	55088578	C	G	SNP	DDX4	ENST00000505374	human	ensembl	74_37	+1	known	nonsense	c.1412	p.S471*	0.998	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX4	HGNC	ENSG00000152670	tier1	-	-	64	0	0.00	48	13	21.31
DEAF1	0	genome.wustl.edu	37	11	674690	674690	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	674690	674690	G	A	SNP	DEAF1	ENST00000382409	human	ensembl	74_37	-1	known	missense	c.1349	p.P450L	0.271	NULL	pfam_SAND_dom,pfam_Znf_MYND,superfamily_SAND_dom-like,smart_SAND_dom,pfscan_Znf_MYND,pfscan_SAND_dom	-	no_errors	DEAF1	HGNC	ENSG00000177030	tier1	-	-	120	0	0.00	106	18	14.52
DIRC2	0	genome.wustl.edu	37	3	122552295	122552295	+	Splice_Site	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	122552295	122552295	T	C	SNP	DIRC2	ENST00000261038	human	ensembl	74_37	+1	known	splice_site	c.833+2	e4+2	0.993	-	-	-	no_errors	DIRC2	HGNC	ENSG00000138463	tier1	-	-	116	0	0.00	61	35	36.08
DLC1	0	genome.wustl.edu	37	8	13356838	13356838	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	8	13356838	13356838	C	A	SNP	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	missense	c.743	p.S248I	0.000	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	-	-	279	0	0.00	143	28	16.37
DNAAF3	0	genome.wustl.edu	37	19	55670605	55670605	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	55670605	55670605	T	C	SNP	DNAAF3	ENST00000527223	human	ensembl	74_37	-1	known	missense	c.1652	p.E551G	0.000	NULL	NULL	-	no_errors	DNAAF3	HGNC	ENSG00000167646	tier1	-	-	33	0	0.00	29	6	17.14
DNAH3	0	genome.wustl.edu	37	16	21073962	21073962	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	16	21073962	21073962	G	A	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	silent	c.3561	p.S1187	0.945	pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	tier1	-	-	62	0	0.00	30	20	40.00
ECT2L	0	genome.wustl.edu	37	6	139164235	139164235	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	6	139164235	139164235	G	C	SNP	ECT2L	ENST00000367682	human	ensembl	74_37	+1	known	missense	c.462	p.W154C	0.995	NULL	pfam_DH-domain,pfam_F-box_dom,superfamily_DH-domain,superfamily_F-box_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ECT2L	HGNC	ENSG00000203734	tier1	-	-	124	0	0.00	62	17	21.52
EFCAB7	0	genome.wustl.edu	37	1	63999296	63999296	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	63999296	63999296	G	C	SNP	EFCAB7	ENST00000371088	human	ensembl	74_37	+1	known	missense	c.658	p.D220H	0.799	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB7	HGNC	ENSG00000203965	tier1	-	-	121	0	0.00	68	15	18.07
ELL2	0	genome.wustl.edu	37	5	95297443	95297445	+	RNA	DEL	GCC	GCC	-			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	95297443	95297445	GCC	-	DEL	ELL2	ENST00000506628	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:0.999:0.938	-	-	-	no_errors	ELL2	HGNC	ENSG00000118985	tier1			9	0	0.00	4	2	33.33
EMP1	0	genome.wustl.edu	37	12	13364426	13364427	+	RNA	INS	-	-	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	13364426	13364427	-	A	INS	EMP1	ENST00000542289	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	EMP1	HGNC	ENSG00000134531	tier1			145	0	0.00	102	9	8.11
ENSG00000180574	0	genome.wustl.edu	37	12	10658769	10658769	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	10658769	10658769	C	A	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	missense	c.268	p.Q90K	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574	tier1	-	-	65	0	0.00	46	6	11.54
ENSG00000180574	0	genome.wustl.edu	37	12	10658771	10658771	+	Silent	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	10658771	10658771	A	G	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	silent	c.270	p.Q90	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574	tier1	-	-	67	0	0.00	48	6	11.11
ENSG00000180574	0	genome.wustl.edu	37	12	10658875	10658875	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	10658875	10658875	G	A	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	missense	c.374	p.R125K	0.996	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574	tier1	rs2230568	-	97	0	0.00	66	6	8.33
ENSG00000180574	0	genome.wustl.edu	37	12	10659014	10659014	+	Silent	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	10659014	10659014	T	G	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	silent	c.513	p.S171	0.995	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574	tier1	-	-	176	0	0.00	131	15	10.27
ENSG00000180574	0	genome.wustl.edu	37	12	10659128	10659128	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	10659128	10659128	G	A	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	silent	c.627	p.A209	0.997	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574	tier1	-	-	160	0	0.00	112	11	8.87
ENSG00000180574	0	genome.wustl.edu	37	12	10659176	10659176	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	10659176	10659176	G	A	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	silent	c.675	p.S225	0.989	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574	tier1	-	-	180	0	0.00	120	15	11.11
ENSG00000180574	0	genome.wustl.edu	37	12	10659458	10659458	+	Silent	SNP	T	T	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	10659458	10659458	T	A	SNP	ENSG00000180574	ENST00000538173	human	ensembl	74_37	+1	known	silent	c.957	p.V319	0.955	pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_TIF2_gsu_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_Transl_elong_EF1A/Init_IF2_C,prints_EF_GTP-bd_dom	-	no_errors	EIF2S3L	Uniprot_gn	ENSG00000180574	tier1	-	-	106	0	0.00	53	7	11.67
ENSG00000254420	0	genome.wustl.edu	37	11	78154811	78154811	+	RNA	DEL	A	A	-			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	78154811	78154811	A	-	DEL	ENSG00000254420	ENST00000534168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-452H21.1	Clone_based_vega_gene	ENSG00000254420	tier1			32	0	0.00	29	3	9.38
ENSG00000266560	0	genome.wustl.edu	37	X	151284076	151284076	+	RNA	SNP	G	G	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	X	151284076	151284076	G	T	SNP	ENSG00000266560	ENST00000509345	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-1007I13.4	Clone_based_vega_gene	ENSG00000266560	tier1	-	-	46	0	0.00	13	13	50.00
EPB41L1	0	genome.wustl.edu	37	20	34776350	34776350	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	20	34776350	34776350	T	A	SNP	EPB41L1	ENST00000338074	human	ensembl	74_37	+1	known	missense	c.955	p.F319I	0.998	pfam_FERM_PH-like_C,pirsf_Band_41_protein,pfscan_FERM_domain	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB_dom,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L1	HGNC	ENSG00000088367	tier1	-	-	56	0	0.00	78	11	12.36
EPB41L1	0	genome.wustl.edu	37	20	34776351	34776351	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	20	34776351	34776351	T	A	SNP	EPB41L1	ENST00000338074	human	ensembl	74_37	+1	known	missense	c.956	p.F319Y	0.999	pfam_FERM_PH-like_C,pirsf_Band_41_protein,pfscan_FERM_domain	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB_dom,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L1	HGNC	ENSG00000088367	tier1	-	-	56	0	0.00	75	11	12.79
EPB41L1	0	genome.wustl.edu	37	20	34776352	34776352	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	20	34776352	34776352	T	A	SNP	EPB41L1	ENST00000338074	human	ensembl	74_37	+1	known	missense	c.957	p.F319L	0.920	pfam_FERM_PH-like_C,pirsf_Band_41_protein,pfscan_FERM_domain	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB_dom,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L1	HGNC	ENSG00000088367	tier1	-	-	56	0	0.00	77	11	12.50
EPPK1	0	genome.wustl.edu	37	8	144941849	144941849	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	8	144941849	144941849	T	G	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.5573	p.D1858A	0.895	NULL	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184	tier1	-	-	187	0	0.00	102	8	7.27
FAM179B	0	genome.wustl.edu	37	14	45432407	45432407	+	Silent	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	14	45432407	45432407	C	G	SNP	FAM179B	ENST00000361577	human	ensembl	74_37	+1	known	silent	c.783	p.A261	0.991	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718	tier1	-	-	95	0	0.00	28	10	26.32
FAM47C	0	genome.wustl.edu	37	X	37027568	37027568	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	X	37027568	37027568	G	A	SNP	FAM47C	ENST00000358047	human	ensembl	74_37	+1	known	missense	c.1085	p.R362H	0.306	NULL	NULL	-	no_errors	FAM47C	HGNC	ENSG00000198173	tier1	rs149671724	-	58	0	0.00	42	15	26.32
FMO1	0	genome.wustl.edu	37	1	171254505	171254505	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	171254505	171254505	G	A	SNP	FMO1	ENST00000354841	human	ensembl	74_37	+1	known	missense	c.1421	p.R474H	1.000	pfam_Flavin_mOase-like,pirsf_DiMe-aniline_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO1	HGNC	ENSG00000010932	tier1	rs28360433	-	89	0	0.00	53	20	27.40
FPGT-TNNI3K	0	genome.wustl.edu	37	1	74808531	74808531	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	74808531	74808531	G	A	SNP	FPGT-TNNI3K	ENST00000557284	human	ensembl	74_37	+1	known	missense	c.1030	p.A344T	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	FPGT-TNNI3K	HGNC	ENSG00000259030	tier1	-	-	163	0	0.00	75	33	30.56
FUK	0	genome.wustl.edu	37	16	70502789	70502789	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	16	70502789	70502789	A	G	SNP	FUK	ENST00000378912	human	ensembl	74_37	+1	known	missense	c.797	p.E266G	1.000	pfam_Fucokinase	pfam_Fucokinase,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Trimer_LpxA-like,prints_Galkinase	-	no_errors	FUK	HGNC	ENSG00000157353	tier1	-	-	174	0	0.00	132	17	11.41
GNPTAB	0	genome.wustl.edu	37	12	102151074	102151074	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	102151074	102151074	C	T	SNP	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	missense	c.3350	p.G1117E	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	tier1	-	-	65	0	0.00	18	6	25.00
GTF2H4	0	genome.wustl.edu	37	6	30881662	30881662	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	6	30881662	30881662	C	G	SNP	GTF2H4	ENST00000259895	human	ensembl	74_37	+1	known	missense	c.1291	p.L431V	1.000	tigrfam_TFIIH_p52/Tfb2	pfam_TFIIH_p52/Tfb2,tigrfam_TFIIH_p52/Tfb2	-	no_errors	GTF2H4	HGNC	ENSG00000213780	tier1	-	-	18	0	0.00	11	9	45.00
HIST1H3F	0	genome.wustl.edu	37	6	26250476	26250476	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	6	26250476	26250476	T	G	SNP	HIST1H3F	ENST00000446824	human	ensembl	74_37	-1	known	missense	c.358	p.I120L	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3F	HGNC	ENSG00000256316	tier1	-	-	101	0	0.00	72	8	10.00
HNRNPL	0	genome.wustl.edu	37	19	39328080	39328080	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	39328080	39328080	T	C	SNP	HNRNPL	ENST00000221419	human	ensembl	74_37	-1	known	missense	c.1655	p.K552R	1.000	tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPL	HGNC	ENSG00000104824	tier1	-	-	72	0	0.00	55	7	11.29
HOXB3	0	genome.wustl.edu	37	17	46629818	46629818	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	17	46629818	46629818	A	G	SNP	HOXB3	ENST00000311626	human	ensembl	74_37	-1	known	missense	c.19	p.Y7H	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB3	HGNC	ENSG00000120093	tier1	-	-	46	0	0.00	17	9	34.62
IFT80	0	genome.wustl.edu	37	3	160099334	160099334	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	160099334	160099334	C	T	SNP	IFT80	ENST00000326448	human	ensembl	74_37	-1	known	silent	c.216	p.K72	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT80	HGNC	ENSG00000068885	tier1	-	-	110	0	0.00	46	45	48.91
IPO7	0	genome.wustl.edu	37	11	9462002	9462002	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	9462002	9462002	A	C	SNP	IPO7	ENST00000379719	human	ensembl	74_37	+1	known	missense	c.2696	p.E899A	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,pfam_Cse1,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO7	HGNC	ENSG00000205339	tier1	-	-	40	0	0.00	42	6	12.50
ITGB3BP	0	genome.wustl.edu	37	1	63912564	63912564	+	RNA	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	63912564	63912564	C	G	SNP	ITGB3BP	ENST00000492655	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	ITGB3BP	HGNC	ENSG00000142856	tier1	-	-	27	0	0.00	17	4	19.05
KIAA2022	0	genome.wustl.edu	37	X	73964227	73964227	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	X	73964227	73964227	T	G	SNP	KIAA2022	ENST00000055682	human	ensembl	74_37	-1	known	missense	c.165	p.K55N	0.995	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030	tier1	-	-	10	0	0.00	9	8	47.06
KIF6	0	genome.wustl.edu	37	6	39328204	39328204	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	6	39328204	39328204	T	G	SNP	KIF6	ENST00000287152	human	ensembl	74_37	-1	known	missense	c.2049	p.E683D	0.997	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627	tier1	-	-	77	0	0.00	68	33	32.67
KMT2E	0	genome.wustl.edu	37	7	104716496	104716496	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	7	104716496	104716496	C	T	SNP	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	missense	c.736	p.R246C	1.000	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483	tier1	-	-	55	0	0.00	26	9	25.71
KRTAP8-1	0	genome.wustl.edu	37	21	32185461	32185461	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	21	32185461	32185461	G	C	SNP	KRTAP8-1	ENST00000329621	human	ensembl	74_37	-1	known	missense	c.78	p.S26R	0.261	pfam_KRTAP_type6/8/16/19/20	pfam_KRTAP_type6/8/16/19/20	-	no_errors	KRTAP8-1	HGNC	ENSG00000183640	tier1	-	-	84	0	0.00	58	6	9.38
LAMA5	0	genome.wustl.edu	37	20	60903969	60903969	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	20	60903969	60903969	G	A	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.4378	p.H1460Y	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	63	0	0.00	76	15	16.48
LCP2	0	genome.wustl.edu	37	5	169693852	169693852	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	169693852	169693852	A	C	SNP	LCP2	ENST00000046794	human	ensembl	74_37	-1	known	missense	c.732	p.D244E	0.253	NULL	pfam_SH2,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,smart_SH2,pfscan_SH2	-	no_errors	LCP2	HGNC	ENSG00000043462	tier1	-	-	211	0	0.00	115	11	8.66
LMOD1	0	genome.wustl.edu	37	1	201868560	201868560	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	201868560	201868560	T	-	DEL	LMOD1	ENST00000367288	human	ensembl	74_37	-1	known	frame_shift_del	c.1581	p.G529fs	0.999	NULL	pfam_Tropomodulin,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	LMOD1	HGNC	ENSG00000163431	tier1			47	0	0.00	35	2	5.41
LOC101243545	0	genome.wustl.edu	37	3	161147240	161147240	+	RNA	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	161147240	161147240	G	A	SNP	LOC101243545	ENST00000473595	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-3P17.4	Clone_based_vega_gene	ENSG00000240567	tier1	-	-	46	0	0.00	36	5	12.20
LTF	0	genome.wustl.edu	37	3	46501208	46501208	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	46501208	46501208	G	A	SNP	LTF	ENST00000231751	human	ensembl	74_37	-1	known	missense	c.145	p.R49C	0.000	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	LTF	HGNC	ENSG00000012223	tier1	-	-	69	0	0.00	41	13	24.07
MACC1	0	genome.wustl.edu	37	7	20198861	20198861	+	Missense_Mutation	SNP	A	A	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	7	20198861	20198861	A	T	SNP	MACC1	ENST00000332878	human	ensembl	74_37	-1	known	missense	c.1123	p.Y375N	1.000	NULL	pfam_SH3_2,superfamily_DEATH-like_dom	-	no_errors	MACC1	HGNC	ENSG00000183742	tier1	-	-	87	0	0.00	36	15	29.41
MAGEC1	0	genome.wustl.edu	37	X	140996328	140996328	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	X	140996328	140996328	A	C	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.3138	p.K1046N	0.031	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	81	0	0.00	76	33	30.28
MAP3K15	0	genome.wustl.edu	37	X	19425334	19425334	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	X	19425334	19425334	A	C	SNP	MAP3K15	ENST00000338883	human	ensembl	74_37	-1	known	missense	c.1816	p.Y606D	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K15	HGNC	ENSG00000180815	tier1	-	-	54	0	0.00	30	22	42.31
MAP6	0	genome.wustl.edu	37	11	75298480	75298480	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	75298480	75298480	T	G	SNP	MAP6	ENST00000304771	human	ensembl	74_37	-1	known	missense	c.2066	p.E689A	0.075	NULL	pfam_MAP6/FAM154	-	no_errors	MAP6	HGNC	ENSG00000171533	tier1	-	-	135	0	0.00	66	22	25.00
MARVELD3	0	genome.wustl.edu	37	16	71674709	71674709	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	16	71674709	71674709	G	A	SNP	MARVELD3	ENST00000299952	human	ensembl	74_37	+1	known	missense	c.1012	p.E338K	1.000	NULL	NULL	-	no_errors	MARVELD3	HGNC	ENSG00000140832	tier1	-	-	61	0	0.00	40	11	21.57
MRPL36	0	genome.wustl.edu	37	5	1798960	1798960	+	Silent	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	1798960	1798960	T	C	SNP	MRPL36	ENST00000382647	human	ensembl	74_37	-1	known	silent	c.90	p.L30	0.000	NULL	pfam_Ribosomal_L36,superfamily_Ribosomal_L36,tigrfam_Ribosomal_L36	-	no_errors	MRPL36	HGNC	ENSG00000171421	tier1	-	-	77	0	0.00	61	13	17.57
MYH7	0	genome.wustl.edu	37	14	23894183	23894183	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	14	23894183	23894183	T	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.2474	p.K825M	1.000	superfamily_P-loop_NTPase	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	-	-	112	0	0.00	61	10	14.08
MYOCD	0	genome.wustl.edu	37	17	12647645	12647645	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	17	12647645	12647645	G	C	SNP	MYOCD	ENST00000425538	human	ensembl	74_37	+1	known	missense	c.863	p.R288P	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MYOCD	HGNC	ENSG00000141052	tier1	-	-	49	0	0.00	27	5	15.62
MYOG	0	genome.wustl.edu	37	1	203055020	203055020	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	203055020	203055020	G	A	SNP	MYOG	ENST00000241651	human	ensembl	74_37	-1	known	missense	c.70	p.P24S	1.000	pfam_Basic,smart_Basic	pfam_Basic,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYOG	HGNC	ENSG00000122180	tier1	-	-	59	0	0.00	39	8	17.02
NCAPD3	0	genome.wustl.edu	37	11	134063917	134063917	+	Silent	SNP	G	G	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	134063917	134063917	G	T	SNP	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	silent	c.1818	p.L606	0.809	superfamily_ARM-type_fold,pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503	tier1	-	-	78	0	0.00	37	5	11.90
NEXN	0	genome.wustl.edu	37	1	78401632	78401632	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	78401632	78401632	C	G	SNP	NEXN	ENST00000334785	human	ensembl	74_37	+1	known	missense	c.1376	p.S459C	1.000	NULL	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	NEXN	HGNC	ENSG00000162614	tier1	-	-	71	0	0.00	40	6	13.04
NPIPB11	0	genome.wustl.edu	37	16	29394314	29394314	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	16	29394314	29394314	C	T	SNP	NPIPB11	ENST00000524087	human	ensembl	74_37	-1	putative	missense	c.1939	p.V647I	0.000	NULL	NULL	-	no_errors	NPIPB11	HGNC	ENSG00000254206	tier1	-	-	60	0	0.00	45	10	18.18
NSA2	0	genome.wustl.edu	37	5	74066624	74066624	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	74066624	74066624	A	G	SNP	NSA2	ENST00000296802	human	ensembl	74_37	+1	known	missense	c.511	p.I171V	1.000	pfam_Ribosomal_S8e/biogenesis_NSA2	pfam_Ribosomal_S8e/biogenesis_NSA2	-	no_errors	NSA2	HGNC	ENSG00000164346				50	0	0.00	26	2	7.14
NTNG1	0	genome.wustl.edu	37	1	107691405	107691405	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	107691405	107691405	A	G	SNP	NTNG1	ENST00000370068	human	ensembl	74_37	+1	known	missense	c.190	p.K64E	1.000	smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_N,pfam_EGF_laminin,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	NTNG1	HGNC	ENSG00000162631	tier1	-	-	164	0	0.00	67	12	15.19
NUP205	0	genome.wustl.edu	37	7	135303240	135303240	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	7	135303240	135303240	G	A	SNP	NUP205	ENST00000285968	human	ensembl	74_37	+1	known	silent	c.3852	p.E1284	1.000	pfam_Nup186/Nup192/Nup205	pfam_Nup186/Nup192/Nup205	-	no_errors	NUP205	HGNC	ENSG00000155561	tier1	-	-	99	0	0.00	84	8	8.70
OR5D14	0	genome.wustl.edu	37	11	55563539	55563539	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	55563539	55563539	T	G	SNP	OR5D14	ENST00000335605	human	ensembl	74_37	+1	known	missense	c.508	p.F170V	0.265	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113	tier1	-	-	174	0	0.00	84	39	31.71
OR8K5	0	genome.wustl.edu	37	11	55927393	55927393	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	55927393	55927393	A	C	SNP	OR8K5	ENST00000313447	human	ensembl	74_37	-1	known	missense	c.401	p.V134G	0.006	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K5	HGNC	ENSG00000181752	tier1	-	-	96	0	0.00	43	8	15.38
PAPPA	0	genome.wustl.edu	37	9	119094664	119094664	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	9	119094664	119094664	C	T	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	missense	c.3314	p.T1105M	1.000	NULL	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752	tier1	-	-	97	0	0.00	78	13	14.29
PCDH17	0	genome.wustl.edu	37	13	58207807	58207807	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	13	58207807	58207807	T	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.1127	p.V376D	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	45	0	0.00	20	14	41.18
PCDHB2	0	genome.wustl.edu	37	5	140475855	140475855	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	140475855	140475855	C	T	SNP	PCDHB2	ENST00000194155	human	ensembl	74_37	+1	known	missense	c.1481	p.P494L	0.320	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB2	HGNC	ENSG00000112852	tier1	-	-	175	0	0.00	59	26	30.59
PCDHGA2	0	genome.wustl.edu	37	5	140720293	140720293	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	140720293	140720293	C	T	SNP	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	silent	c.1755	p.G585	0.984	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853				172	0	0.00	132	11	7.64
PCDHGA8	0	genome.wustl.edu	37	5	140774056	140774056	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	140774056	140774056	C	T	SNP	PCDHGA8	ENST00000398604	human	ensembl	74_37	+1	known	missense	c.1676	p.A559V	0.004	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767	tier1	-	-	194	0	0.00	141	14	9.03
PDE3B	0	genome.wustl.edu	37	11	14793484	14793484	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	11	14793484	14793484	T	C	SNP	PDE3B	ENST00000282096	human	ensembl	74_37	+1	known	missense	c.980	p.M327T	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3B	HGNC	ENSG00000152270	tier1	-	-	78	0	0.00	58	5	7.94
PGS1	0	genome.wustl.edu	37	17	76400045	76400045	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	17	76400045	76400045	G	A	SNP	PGS1	ENST00000262764	human	ensembl	74_37	+1	known	missense	c.1277	p.G426D	0.998	pirsf_PLipase-D_PtdSer-synthase-type	pirsf_PLipase-D_PtdSer-synthase-type,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PGS1	HGNC	ENSG00000087157	tier1	-	-	83	0	0.00	51	11	17.74
PHYKPL	0	genome.wustl.edu	37	5	177657057	177657057	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	177657057	177657057	C	T	SNP	PHYKPL	ENST00000308158	human	ensembl	74_37	-1	known	silent	c.222	p.Q74	1.000	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase	-	no_errors	PHYKPL	HGNC	ENSG00000175309	tier1	-	-	123	0	0.00	75	19	20.21
PIKFYVE	0	genome.wustl.edu	37	2	209207357	209207357	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	209207357	209207357	A	G	SNP	PIKFYVE	ENST00000264380	human	ensembl	74_37	+1	known	missense	c.5011	p.I1671V	1.000	NULL	pfam_PInositol-4-P-5-kinase_core,pfam_Cpn60/TCP-1,pfam_DEP_dom,pfam_Znf_FYVE,superfamily_GroEL-like_apical_dom,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,smart_DEP_dom,smart_PInositol-4P-5-kinase_core_sub,pfscan_DEP_dom,pfscan_Znf_FYVE-rel	-	no_errors	PIKFYVE	HGNC	ENSG00000115020	tier1	-	-	117	0	0.00	91	10	9.90
PM20D1	0	genome.wustl.edu	37	1	205814572	205814572	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	205814572	205814572	C	T	SNP	PM20D1	ENST00000367136	human	ensembl	74_37	-1	known	missense	c.370	p.A124T	1.000	pfam_Peptidase_M20	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer	-	no_errors	PM20D1	HGNC	ENSG00000162877	tier1	-	-	82	0	0.00	66	5	7.04
PSG6	0	genome.wustl.edu	37	19	43411955	43411955	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	43411955	43411955	T	C	SNP	PSG6	ENST00000292125	human	ensembl	74_37	-1	known	missense	c.758	p.K253R	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG6	HGNC	ENSG00000170848	tier1	-	-	249	0	0.00	224	35	13.51
RABGAP1	0	genome.wustl.edu	37	9	125827753	125827753	+	Frame_Shift_Del	DEL	A	A	-			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	9	125827753	125827753	A	-	DEL	RABGAP1	ENST00000456584	human	ensembl	74_37	+1	known	frame_shift_del	c.1717	p.K576fs	0.000	pfscan_Rab-GTPase-TBC_dom	pfam_Kinesin-like,pfam_Rab-GTPase-TBC_dom,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454	tier1			30	0	0.00	20	4	16.67
RAP1GAP	0	genome.wustl.edu	37	1	21978087	21978088	+	RNA	DEL	AC	AC	-			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	21978087	21978088	AC	-	DEL	RAP1GAP	ENST00000374757	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013:0.018	-	-	-	no_errors	RAP1GAP	HGNC	ENSG00000076864	tier1			9	0	0.00	12	3	20.00
RFC2	0	genome.wustl.edu	37	7	73654326	73654326	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	7	73654326	73654326	G	C	SNP	RFC2	ENST00000055077	human	ensembl	74_37	-1	known	missense	c.635	p.P212R	0.009	superfamily_P-loop_NTPase	pfam_Rep_factorC_C_dom,pfam_ATPase_AAA_core,pfam_(+)RNA_virus_helicase_core_dom,superfamily_P-loop_NTPase,superfamily_DNA_pol3_clamp-load_cplx_C,smart_AAA+_ATPase	-	no_errors	RFC2	HGNC	ENSG00000049541				14	0	0.00	17	2	10.53
RNF10	0	genome.wustl.edu	37	12	120984304	120984304	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	120984304	120984304	G	C	SNP	RNF10	ENST00000413266	human	ensembl	74_37	+1	known	missense	c.254	p.S85T	0.999	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF10	HGNC	ENSG00000022840	tier1	-	-	112	0	0.00	71	15	17.44
RPTN	0	genome.wustl.edu	37	1	152128574	152128574	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	152128574	152128574	G	A	SNP	RPTN	ENST00000316073	human	ensembl	74_37	-1	known	missense	c.1001	p.P334L	0.029	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	RPTN	HGNC	ENSG00000215853	tier1	-	-	822	0	0.00	580	76	11.59
RTN2	0	genome.wustl.edu	37	19	45997874	45997874	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	45997874	45997874	C	T	SNP	RTN2	ENST00000245923	human	ensembl	74_37	-1	known	missense	c.469	p.G157R	0.815	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN2	HGNC	ENSG00000125744	tier1	-	-	65	0	0.00	58	15	20.27
RYR3	0	genome.wustl.edu	37	15	34140622	34140622	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	15	34140622	34140622	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.13628	p.P4543L	1.000	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	65	0	0.00	60	11	15.49
SCN10A	0	genome.wustl.edu	37	3	38805071	38805072	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	38805071	38805072	-	TG	INS	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	frame_shift_ins	c.616_615	p.I205fs	0.003:0.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313	tier1			83	0	0.00	65	8	10.96
SCN11A	0	genome.wustl.edu	37	3	38949575	38949575	+	Silent	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	38949575	38949575	A	C	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	silent	c.1338	p.T446	0.995	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	tier1	-	-	138	0	0.00	88	9	9.28
SCN5A	0	genome.wustl.edu	37	3	38649647	38649647	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	38649647	38649647	G	A	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	silent	c.993	p.D331	0.852	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873	tier1	-	-	138	0	0.00	91	14	13.33
SEMA6A	0	genome.wustl.edu	37	5	115783294	115783294	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	5	115783294	115783294	G	A	SNP	SEMA6A	ENST00000257414	human	ensembl	74_37	-1	known	missense	c.2159	p.T720I	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6A	HGNC	ENSG00000092421	tier1	-	-	134	0	0.00	60	16	21.05
SERTAD1	0	genome.wustl.edu	37	19	40929409	40929411	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	40929409	40929411	CTC	-	DEL	SERTAD1	ENST00000357949	human	ensembl	74_37	-1	known	in_frame_del	c.45_43	p.E15in_frame_del	0.888:0.889:0.928	NULL	pfam_SERTA,pfscan_SERTA	-	no_errors	SERTAD1	HGNC	ENSG00000197019	tier1			47	0	0.00	42	4	8.70
SIGLEC9	0	genome.wustl.edu	37	19	51629020	51629020	+	Silent	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	51629020	51629020	G	A	SNP	SIGLEC9	ENST00000440804	human	ensembl	74_37	+1	known	silent	c.588	p.S196	0.390	pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	SIGLEC9	HGNC	ENSG00000129450	tier1	rs146360536	-	84	0	0.00	43	5	10.42
SLAMF7	0	genome.wustl.edu	37	1	160720163	160720163	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	160720163	160720163	T	G	SNP	SLAMF7	ENST00000368043	human	ensembl	74_37	+1	known	missense	c.719	p.L240R	0.001	NULL	pfam_Ig_V-set,pfscan_Ig-like_dom	-	no_errors	SLAMF7	HGNC	ENSG00000026751	tier1	-	-	201	0	0.00	136	18	11.69
SLC25A38	0	genome.wustl.edu	37	3	39435988	39435988	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	39435988	39435988	C	A	SNP	SLC25A38	ENST00000273158	human	ensembl	74_37	+1	known	missense	c.713	p.A238E	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A38	HGNC	ENSG00000144659	tier1	-	-	188	0	0.00	119	11	8.46
SLC39A10	0	genome.wustl.edu	37	2	196581416	196581416	+	Silent	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	196581416	196581416	T	C	SNP	SLC39A10	ENST00000359634	human	ensembl	74_37	+1	known	silent	c.1752	p.D584	0.977	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A10	HGNC	ENSG00000196950	tier1	-	-	74	0	0.00	60	8	11.59
SLC7A6	0	genome.wustl.edu	37	16	68324429	68324430	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	16	68324429	68324430	-	A	INS	SLC7A6	ENST00000219343	human	ensembl	74_37	+1	known	frame_shift_ins	c.780_781	p.N261fs	1.000:1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A6	HGNC	ENSG00000103064	tier1			54	0	0.00	29	10	25.64
SMO	0	genome.wustl.edu	37	7	128845063	128845063	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	7	128845063	128845063	A	C	SNP	SMO	ENST00000249373	human	ensembl	74_37	+1	known	missense	c.557	p.K186T	1.000	superfamily_Frizzled_dom	pfam_Frizzled,pfam_Frizzled_dom,pfam_GPCR_2_secretin-like,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	SMO	HGNC	ENSG00000128602	tier1	-	-	30	0	0.00	33	18	35.29
SMOC1	0	genome.wustl.edu	37	14	70490004	70490004	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	14	70490004	70490004	C	T	SNP	SMOC1	ENST00000361956	human	ensembl	74_37	+1	known	silent	c.1131	p.N377	0.000	pfam_SPARC/Testican_Ca-bd-dom	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SMOC1	HGNC	ENSG00000198732	tier1	-	-	72	0	0.00	25	20	44.44
SOS1	0	genome.wustl.edu	37	2	39285941	39285941	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	39285941	39285941	C	G	SNP	SOS1	ENST00000402219	human	ensembl	74_37	-1	known	missense	c.218	p.R73P	1.000	superfamily_Histone-fold	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS1	HGNC	ENSG00000115904	tier1	-	-	63	0	0.00	41	9	18.00
SPTBN1	0	genome.wustl.edu	37	2	54856335	54856335	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	54856335	54856335	C	T	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	silent	c.2064	p.S688	0.878	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306	tier1	-	-	64	0	0.00	41	5	10.87
SRGAP3	0	genome.wustl.edu	37	3	9100117	9100117	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	9100117	9100117	A	C	SNP	SRGAP3	ENST00000383836	human	ensembl	74_37	-1	known	missense	c.841	p.F281V	1.000	NULL	pfam_RhoGAP_dom,pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_FCH_dom,smart_RhoGAP_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	SRGAP3	HGNC	ENSG00000196220	tier1	-	-	106	0	0.00	80	7	8.05
TANC1	0	genome.wustl.edu	37	2	160074022	160074022	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	160074022	160074022	G	A	SNP	TANC1	ENST00000263635	human	ensembl	74_37	+1	known	missense	c.3259	p.A1087T	0.996	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC1	HGNC	ENSG00000115183	tier1	-	-	159	0	0.00	112	15	11.81
TCHH	0	genome.wustl.edu	37	1	152081443	152081443	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	152081443	152081443	C	T	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.4250	p.R1417H	0.080	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450	tier1	-	-	174	0	0.00	64	64	50.00
TLE1	0	genome.wustl.edu	37	9	84268917	84268917	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	9	84268917	84268917	G	A	SNP	TLE1	ENST00000376499	human	ensembl	74_37	-1	known	missense	c.269	p.A90V	1.000	pfam_Groucho/TLE_N	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE1	HGNC	ENSG00000196781	tier1	-	-	66	0	0.00	41	6	12.50
TMEM38B	0	genome.wustl.edu	37	9	108483827	108483828	+	Frame_Shift_Ins	INS	-	-	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	9	108483827	108483828	-	T	INS	TMEM38B	ENST00000374692	human	ensembl	74_37	+1	known	frame_shift_ins	c.279_280	p.C95fs	0.034:0.996	pfam_TRIC_channel	pfam_TRIC_channel	-	no_errors	TMEM38B	HGNC	ENSG00000095209	tier1			59	0	0.00	55	11	16.67
TNS1	0	genome.wustl.edu	37	2	218683458	218683458	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	218683458	218683458	C	T	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	silent	c.3285	p.S1095	0.003	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308	tier1	-	-	54	0	0.00	46	17	26.98
TP53	0	genome.wustl.edu	37	17	7577120	7577120	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	17	7577120	7577120	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.818	p.R273H	0.864	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934576	GMAF=0.0005	16	0	0.00	11	6	35.29
TRIM17	0	genome.wustl.edu	37	1	228602404	228602404	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	228602404	228602404	A	G	SNP	TRIM17	ENST00000295033	human	ensembl	74_37	-1	known	missense	c.370	p.S124P	1.000	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM17	HGNC	ENSG00000162931	tier1	-	-	49	0	0.00	60	6	9.09
TRO	0	genome.wustl.edu	37	X	54950059	54950059	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	X	54950059	54950059	A	G	SNP	TRO	ENST00000173898	human	ensembl	74_37	+1	known	missense	c.1094	p.Q365R	0.042	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	TRO	HGNC	ENSG00000067445	tier1	-	-	16	0	0.00	8	4	33.33
TROAP	0	genome.wustl.edu	37	12	49724683	49724683	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	12	49724683	49724683	T	-	DEL	TROAP	ENST00000257909	human	ensembl	74_37	+1	known	frame_shift_del	c.2055	p.I686fs	0.066	NULL	NULL	-	no_errors	TROAP	HGNC	ENSG00000135451	tier1			145	0	0.00	98	44	30.99
TRRAP	0	genome.wustl.edu	37	7	98609747	98609747	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	7	98609747	98609747	A	C	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	missense	c.11349	p.K3783N	0.880	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367	tier1	-	-	41	0	0.00	57	7	10.94
TSACC	0	genome.wustl.edu	37	1	156314403	156314403	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	156314403	156314403	C	G	SNP	TSACC	ENST00000368251	human	ensembl	74_37	+1	known	missense	c.67	p.L23V	1.000	NULL	NULL	-	no_errors	TSACC	HGNC	ENSG00000163467	tier1	-	-	113	0	0.00	99	11	10.00
UPK3A	0	genome.wustl.edu	37	22	45691480	45691480	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	22	45691480	45691480	C	T	SNP	UPK3A	ENST00000216211	human	ensembl	74_37	+1	known	silent	c.744	p.S248	0.998	NULL	NULL	-	no_errors	UPK3A	HGNC	ENSG00000100373	tier1	-	-	118	0	0.00	63	26	29.21
UROC1	0	genome.wustl.edu	37	3	126220082	126220082	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	126220082	126220082	T	C	SNP	UROC1	ENST00000290868	human	ensembl	74_37	-1	known	missense	c.944	p.H315R	1.000	pfam_Urocanase,superfamily_Urocanase,pirsf_Urocanase	pfam_Urocanase,superfamily_Urocanase,pirsf_Urocanase	-	no_errors	UROC1	HGNC	ENSG00000159650	tier1	-	-	281	0	0.00	197	22	10.05
USP34	0	genome.wustl.edu	37	2	61522155	61522155	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	61522155	61522155	C	G	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	missense	c.4390	p.D1464H	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464	tier1	-	-	59	0	0.00	44	11	20.00
USP48	0	genome.wustl.edu	37	1	22033386	22033386	+	Frame_Shift_Del	DEL	A	A	-			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	22033386	22033386	A	-	DEL	USP48	ENST00000529637	human	ensembl	74_37	-1	novel	frame_shift_del	c.1975	p.S659fs	0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67,pfscan_Ubiquitin_supergroup	-	no_errors	USP48	HGNC	ENSG00000090686	tier1			39	0	0.00	34	3	8.11
VDAC3	0	genome.wustl.edu	37	8	42256279	42256279	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	8	42256279	42256279	G	T	SNP	VDAC3	ENST00000392935	human	ensembl	74_37	+1	known	missense	c.170	p.G57V	1.000	pfam_Porin_Euk/Tom40	pfam_Porin_Euk/Tom40,prints_Porin_Euk	-	no_errors	VDAC3	HGNC	ENSG00000078668				91	0	0.00	50	4	7.41
WNT3A	0	genome.wustl.edu	37	1	228246735	228246735	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	1	228246735	228246735	G	A	SNP	WNT3A	ENST00000366753	human	ensembl	74_37	+1	known	missense	c.628	p.G210S	1.000	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt3	-	no_errors	WNT3A	HGNC	ENSG00000154342	tier1	-	-	38	0	0.00	24	8	25.00
XRCC5	0	genome.wustl.edu	37	2	216992348	216992348	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	2	216992348	216992348	C	G	SNP	XRCC5	ENST00000392132	human	ensembl	74_37	+1	known	missense	c.888	p.C296W	1.000	pfam_Ku70/Ku80_beta-barrel_dom,superfamily_SPOC_like_C_dom	pfam_Ku_N,pfam_Ku_PK_bind,pfam_Ku70/Ku80_beta-barrel_dom,pfam_Ku_C,superfamily_SPOC_like_C_dom,superfamily_Ku_PK_bind,smart_VWF_A,smart_Ku70/Ku80_beta-barrel_dom	-	no_errors	XRCC5	HGNC	ENSG00000079246	tier1	-	-	46	0	0.00	48	7	12.73
ZNF235	0	genome.wustl.edu	37	19	44792464	44792464	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	44792464	44792464	T	C	SNP	ZNF235	ENST00000291182	human	ensembl	74_37	-1	known	missense	c.1124	p.Y375C	0.599	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF235	HGNC	ENSG00000159917	tier1	-	-	47	0	0.00	32	11	25.58
ZNF257	0	genome.wustl.edu	37	19	22270805	22270805	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	19	22270805	22270805	C	A	SNP	ZNF257	ENST00000594947	human	ensembl	74_37	+1	known	missense	c.253	p.L85I	0.100	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF257	HGNC	ENSG00000197134	tier1	-	-	47	0	0.00	19	6	24.00
ZNF385D	0	genome.wustl.edu	37	3	21465499	21465499	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	3	21465499	21465499	A	C	SNP	ZNF385D	ENST00000281523	human	ensembl	74_37	-1	known	missense	c.910	p.Y304D	1.000	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZNF385D	HGNC	ENSG00000151789	tier1	-	-	155	0	0.00	62	7	10.14
ZNF451	0	genome.wustl.edu	37	6	57012446	57012446	+	Silent	SNP	C	C	T			TCGA-VQ-A8E2-01A-11D-A364-08	TCGA-VQ-A8E2-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	830888e7-ffcf-4145-92a1-8f649723c95e	57e6bffa-d7af-4d32-92b1-0a51b931434e	6	57012446	57012446	C	T	SNP	ZNF451	ENST00000370706	human	ensembl	74_37	+1	known	silent	c.1563	p.H521	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF451	HGNC	ENSG00000112200	tier1	rs143799111	-	208	0	0.00	145	12	7.64
