Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCG4	0	genome.wustl.edu	37	11	119031791	119031791	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	119031791	119031791	G	A	SNP	ABCG4	ENST00000307417	human	ensembl	74_37	+1	known	missense	c.1916	p.R639H	0.999	NULL	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCG4	HGNC	ENSG00000172350	tier1	-	-	60	0	0.00	42	16	27.59
ADAMTS14	0	genome.wustl.edu	37	10	72468396	72468396	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	10	72468396	72468396	G	A	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	silent	c.732	p.L244	0.999	NULL	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316	tier1	-	-	133	0	0.00	44	9	16.98
ADAMTS14	0	genome.wustl.edu	37	10	72509617	72509617	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	10	72509617	72509617	C	G	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	missense	c.2312	p.P771R	1.000	pfam_ADAM_spacer1	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316	tier1	-	-	57	0	0.00	28	9	24.32
ADCK5	0	genome.wustl.edu	37	8	145617194	145617194	+	Silent	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	145617194	145617194	C	T	SNP	ADCK5	ENST00000308860	human	ensembl	74_37	+1	known	silent	c.1068	p.F356	1.000	superfamily_Kinase-like_dom	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK5	HGNC	ENSG00000173137	tier1	-	-	130	0	0.00	76	24	24.00
ADCY8	0	genome.wustl.edu	37	8	131896989	131896989	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	131896989	131896989	T	C	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.1930	p.R644G	1.000	pfam_Adenylate_cyclase-like	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	195	0	0.00	113	32	22.07
AGBL2	0	genome.wustl.edu	37	11	47698917	47698917	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	47698917	47698917	G	A	SNP	AGBL2	ENST00000357610	human	ensembl	74_37	-1	known	nonsense	c.2053	p.R685*	1.000	NULL	pfam_Peptidase_M14	-	no_errors	AGBL2	HGNC	ENSG00000165923	tier1	-	-	39	0	0.00	36	4	10.00
AGBL5	0	genome.wustl.edu	37	2	27278796	27278796	+	Silent	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	27278796	27278796	C	T	SNP	AGBL5	ENST00000360131	human	ensembl	74_37	+1	known	silent	c.1155	p.N385	0.001	NULL	pfam_Peptidase_M14	-	no_errors	AGBL5	HGNC	ENSG00000084693	tier1	rs113809750	-	121	0	0.00	64	33	34.02
AGPAT4	0	genome.wustl.edu	37	6	161653136	161653136	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	6	161653136	161653136	A	G	SNP	AGPAT4	ENST00000320285	human	ensembl	74_37	-1	known	missense	c.110	p.L37P	0.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	AGPAT4	HGNC	ENSG00000026652	tier1	-	-	64	0	0.00	26	11	29.73
AMELY	0	genome.wustl.edu	37	Y	6736491	6736491	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	Y	6736491	6736491	C	T	SNP	AMELY	ENST00000383036	human	ensembl	74_37	-1	known	missense	c.202	p.G68S	1.000	pfam_Amelogenin,smart_Amelogenin	pfam_Amelogenin,smart_Amelogenin,prints_Amelogenin	-	no_errors	AMELY	HGNC	ENSG00000099721	tier1	-	-	32	0	0.00	6	20	76.92
AMIGO3	0	genome.wustl.edu	37	3	49756654	49756654	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	49756654	49756654	G	A	SNP	AMIGO3	ENST00000320431	human	ensembl	74_37	-1	known	missense	c.245	p.A82V	0.115	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	AMIGO3	HGNC	ENSG00000176020	tier1	-	-	129	0	0.00	52	18	25.71
ANKRD30A	0	genome.wustl.edu	37	10	37421265	37421265	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	10	37421265	37421265	A	G	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.440	p.K147R	0.001	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513				109	0	0.00	43	26	37.68
APC	0	genome.wustl.edu	37	5	112174187	112174187	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	5	112174187	112174187	A	G	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.2896	p.S966G	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1	-	-	58	0	0.00	26	7	21.21
APLP1	0	genome.wustl.edu	37	19	36370054	36370054	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	36370054	36370054	G	A	SNP	APLP1	ENST00000221891	human	ensembl	74_37	+1	known	missense	c.1792	p.V598I	0.983	pfam_APP_amyloid_C,prints_Amyloid_glyco	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,smart_Amyloid_glyco_extra,prints_Amyloid_glyco	-	no_errors	APLP1	HGNC	ENSG00000105290	tier1	-	-	62	0	0.00	22	38	63.33
ATP8A2	0	genome.wustl.edu	37	13	26163784	26163784	+	Nonsense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	26163784	26163784	C	T	SNP	ATP8A2	ENST00000381655	human	ensembl	74_37	+1	known	nonsense	c.2158	p.R720*	0.312	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A2	HGNC	ENSG00000132932	tier1	-	-	172	0	0.00	91	16	14.95
BAD	0	genome.wustl.edu	37	11	64037708	64037708	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	64037708	64037708	G	A	SNP	BAD	ENST00000544785	human	ensembl	74_37	-1	putative	nonsense	c.289	p.Q97*	0.669	NULL	pfam_Bcl-2_BAD	-	no_errors	BAD	HGNC	ENSG00000002330	tier1	-	-	50	0	0.00	25	6	18.75
BAI3	0	genome.wustl.edu	37	6	69640508	69640508	+	Frame_Shift_Del	DEL	A	A	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	6	69640508	69640508	A	-	DEL	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	frame_shift_del	c.815	p.R274fs	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1			72	0	0.00	33	2	5.71
BMS1P20	0	genome.wustl.edu	37	22	22661478	22661478	+	RNA	SNP	T	T	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	22	22661478	22661478	T	G	SNP	BMS1P20	ENST00000426066	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	BMS1P20	HGNC	ENSG00000236850	tier1	-	-	67	0	0.00	36	4	10.00
CACNA2D4	0	genome.wustl.edu	37	12	1993439	1993439	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	12	1993439	1993439	G	A	SNP	CACNA2D4	ENST00000382722	human	ensembl	74_37	-1	known	missense	c.1321	p.R441C	0.969	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D4	HGNC	ENSG00000151062	tier1	-	-	41	0	0.00	20	7	25.93
CBX4	0	genome.wustl.edu	37	17	77808241	77808243	+	In_Frame_Del	DEL	GTG	GTG	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	GTG	GTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	77808241	77808243	GTG	-	DEL	CBX4	ENST00000269397	human	ensembl	74_37	-1	known	in_frame_del	c.1200_1198	p.H400in_frame_del	0.632:0.816:0.840	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,prints_Chromo_dom_subgr,pfscan_Chromo_domain/shadow	-	no_errors	CBX4	HGNC	ENSG00000141582	tier1			26	0	0.00	6	2	25.00
CD81	0	genome.wustl.edu	37	11	2418061	2418061	+	Silent	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	2418061	2418061	C	T	SNP	CD81	ENST00000263645	human	ensembl	74_37	+1	known	silent	c.676	p.L226	1.000	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	CD81	HGNC	ENSG00000110651				75	0	0.00	22	3	12.00
CDH2	0	genome.wustl.edu	37	18	25585874	25585874	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	18	25585874	25585874	G	A	SNP	CDH2	ENST00000269141	human	ensembl	74_37	-1	known	silent	c.786	p.D262	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH2	HGNC	ENSG00000170558	tier1	-	-	110	0	0.00	55	20	26.67
CDH22	0	genome.wustl.edu	37	20	44815287	44815287	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	20	44815287	44815287	A	G	SNP	CDH22	ENST00000372262	human	ensembl	74_37	-1	known	missense	c.1603	p.Y535H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,superfamily_MFS_dom_general_subst_transpt,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH22	HGNC	ENSG00000149654	tier1	-	-	65	0	0.00	48	9	15.79
CDK12	0	genome.wustl.edu	37	17	37681103	37681103	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	37681103	37681103	C	T	SNP	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	missense	c.3272	p.P1091L	0.996	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	tier1	-	-	60	0	0.00	37	15	28.85
CILP2	0	genome.wustl.edu	37	19	19655211	19655211	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	19655211	19655211	G	A	SNP	CILP2	ENST00000291495	human	ensembl	74_37	+1	known	silent	c.1857	p.A619	0.009	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,superfamily_Carb-bd-like_fold,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP2	HGNC	ENSG00000160161	tier1	rs145144323	-	146	0	0.00	60	13	17.81
CLCA4	0	genome.wustl.edu	37	1	87029391	87029391	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	87029391	87029391	G	C	SNP	CLCA4	ENST00000370563	human	ensembl	74_37	+1	known	missense	c.496	p.D166H	1.000	pfam_Cl_channel_Ca,tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,superfamily_Fibronectin_type3,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA4	HGNC	ENSG00000016602	tier1	-	-	50	0	0.00	44	4	8.33
CMTM1	0	genome.wustl.edu	37	16	66600575	66600575	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	16	66600575	66600575	C	-	DEL	CMTM1	ENST00000533953	human	ensembl	74_37	+1	putative	frame_shift_del	c.159	p.A55fs	0.000	NULL	NULL	-	no_errors	CMTM1	HGNC	ENSG00000089505	tier1			32	0	0.00	13	2	13.33
COL11A1	0	genome.wustl.edu	37	1	103355033	103355033	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	103355033	103355033	G	C	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.4478	p.S1493C	0.999	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	147	0	0.00	66	4	5.71
COL14A1	0	genome.wustl.edu	37	8	121237326	121237326	+	Splice_Site	SNP	G	G	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	121237326	121237326	G	T	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	splice_site	c.1738-1	e14-1	1.000	-	-	-	no_errors	COL14A1	HGNC	ENSG00000187955	tier1	-	-	106	0	0.00	136	18	11.61
CSNK2A2	0	genome.wustl.edu	37	16	58201157	58201157	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	16	58201157	58201157	A	C	SNP	CSNK2A2	ENST00000262506	human	ensembl	74_37	-1	known	missense	c.680	p.I227S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK2A2	HGNC	ENSG00000070770	tier1	-	-	43	0	0.00	21	6	22.22
CYP7B1	0	genome.wustl.edu	37	8	65537035	65537035	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	65537035	65537035	A	C	SNP	CYP7B1	ENST00000310193	human	ensembl	74_37	-1	known	missense	c.184	p.L62V	0.009	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817	tier1	-	-	172	0	0.00	90	21	18.92
DAAM1	0	genome.wustl.edu	37	14	59793352	59793352	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	14	59793352	59793352	G	C	SNP	DAAM1	ENST00000351081	human	ensembl	74_37	+1	known	missense	c.1299	p.K433N	1.000	pfam_FH3_dom,superfamily_ARM-type_fold,superfamily_tRNA-bd_arm	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,superfamily_tRNA-bd_arm,smart_FH2_Formin	-	no_errors	DAAM1	HGNC	ENSG00000100592	tier1	-	-	89	0	0.00	38	33	46.48
DBF4	0	genome.wustl.edu	37	7	87537265	87537265	+	Silent	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	7	87537265	87537265	A	G	SNP	DBF4	ENST00000265728	human	ensembl	74_37	+1	known	silent	c.1812	p.T604	0.263	NULL	pfam_Znf_DBF,superfamily_BRCT_dom,smart_Znf_DBF	-	no_errors	DBF4	HGNC	ENSG00000006634				65	0	0.00	38	2	5.00
DCDC1	0	genome.wustl.edu	37	11	31327321	31327321	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	31327321	31327321	G	T	SNP	DCDC1	ENST00000452803	human	ensembl	74_37	-1	known	missense	c.595	p.L199M	1.000	pfscan_Doublecortin_dom	pfscan_Doublecortin_dom	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	102	0	0.00	41	8	16.33
DENND4B	0	genome.wustl.edu	37	1	153910210	153910210	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	153910210	153910210	G	C	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.2095	p.P699A	0.689	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	tier1	-	-	203	0	0.00	97	9	8.41
DLD	0	genome.wustl.edu	37	7	107558430	107558430	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	7	107558430	107558430	C	T	SNP	DLD	ENST00000205402	human	ensembl	74_37	+1	known	missense	c.1298	p.A433V	1.000	pfam_Pyr_nucl-diS_OxRdtase_dimer,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_Hg_reductase,tigrfam_Lipoamide_DH	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_FAD_bind_dom,pfam_GIDA-rel,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,prints_Pyridine_nuc-diS_OxRdtase_2,tigrfam_Lipoamide_DH	-	no_errors	DLD	HGNC	ENSG00000091140	tier1	-	-	120	0	0.00	48	29	37.66
DLGAP1	0	genome.wustl.edu	37	18	3742349	3742349	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	18	3742349	3742349	T	C	SNP	DLGAP1	ENST00000315677	human	ensembl	74_37	-1	known	missense	c.1336	p.S446G	1.000	NULL	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579				29	0	0.00	31	4	11.43
DOK3	0	genome.wustl.edu	37	5	176931353	176931353	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	5	176931353	176931353	G	A	SNP	DOK3	ENST00000357198	human	ensembl	74_37	-1	known	silent	c.1122	p.N374	0.000	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK3	HGNC	ENSG00000146094	tier1	-	-	35	0	0.00	10	5	33.33
DPY19L2	0	genome.wustl.edu	37	12	63954354	63954354	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	12	63954354	63954354	C	T	SNP	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	missense	c.2215	p.A739T	0.035	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990	tier1	-	-	103	0	0.00	76	10	11.63
DSP	0	genome.wustl.edu	37	6	7580988	7580988	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	6	7580988	7580988	C	G	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.4565	p.T1522R	0.001	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696	tier1	-	-	107	0	0.00	73	7	8.75
DTNBP1	0	genome.wustl.edu	37	6	15663053	15663053	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	6	15663053	15663053	G	A	SNP	DTNBP1	ENST00000355917	human	ensembl	74_37	-1	known	silent	c.48	p.F16	1.000	NULL	pfam_Dysbindin,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	-	no_errors	DTNBP1	HGNC	ENSG00000047579	tier1	-	-	82	0	0.00	52	22	29.73
ENSG00000257514	0	genome.wustl.edu	37	12	102040745	102040745	+	RNA	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	12	102040745	102040745	C	A	SNP	ENSG00000257514	ENST00000547027	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-755O11.2	Clone_based_vega_gene	ENSG00000257514	tier1	-	-	38	0	0.00	21	7	25.00
ENSG00000258027	0	genome.wustl.edu	37	14	20086382	20086383	+	Splice_Site	INS	-	-	AAAA			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	14	20086382	20086383	-	AAAA	INS	ENSG00000258027	ENST00000548217	human	ensembl	74_37	+1	known	splice_site_ins	c.NULL	NULL	1.000:0.986	-	-	-	no_errors	RP11-597A11.1	Clone_based_vega_gene	ENSG00000258027	tier1			12	0	0.00	10	7	41.18
ESRRG	0	genome.wustl.edu	37	1	216692636	216692638	+	In_Frame_Del	DEL	ATA	ATA	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	ATA	ATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	216692636	216692638	ATA	-	DEL	ESRRG	ENST00000408911	human	ensembl	74_37	-1	known	in_frame_del	c.990_988	p.Y330in_frame_del	1.000:1.000:1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	ESRRG	HGNC	ENSG00000196482	tier1			86	0	0.00	18	19	51.35
FAM13C	0	genome.wustl.edu	37	10	61028353	61028353	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	10	61028353	61028353	C	T	SNP	FAM13C	ENST00000373868	human	ensembl	74_37	-1	known	missense	c.902	p.R301Q	1.000	NULL	NULL	-	no_errors	FAM13C	HGNC	ENSG00000148541	tier1	-	-	110	0	0.00	35	19	35.19
FAM161A	0	genome.wustl.edu	37	2	62067292	62067292	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	62067292	62067292	G	A	SNP	FAM161A	ENST00000405894	human	ensembl	74_37	-1	known	nonsense	c.847	p.R283*	1.000	pfam_UPF0564	pfam_UPF0564	-	no_errors	FAM161A	HGNC	ENSG00000170264	tier1	-	-	127	0	0.00	94	6	6.00
FAM84A	0	genome.wustl.edu	37	2	14774300	14774300	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	14774300	14774300	A	G	SNP	FAM84A	ENST00000295092	human	ensembl	74_37	+1	known	missense	c.197	p.E66G	1.000	NULL	pfam_LRAT-like_dom	-	no_errors	FAM84A	HGNC	ENSG00000162981	tier1	-	-	23	0	0.00	9	6	40.00
FMNL1	0	genome.wustl.edu	37	17	43322438	43322438	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	43322438	43322438	C	A	SNP	FMNL1	ENST00000328118	human	ensembl	74_37	+1	known	missense	c.2691	p.F897L	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL1	HGNC	ENSG00000184922	tier1	-	-	53	0	0.00	30	5	14.29
FPR2	0	genome.wustl.edu	37	19	52272018	52272018	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	52272018	52272018	C	A	SNP	FPR2	ENST00000340023	human	ensembl	74_37	+1	known	missense	c.107	p.T36N	0.995	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt,prints_DEZorph_rcpt	-	no_errors	FPR2	HGNC	ENSG00000171049	tier1	-	-	93	0	0.00	45	6	11.76
FRY	0	genome.wustl.edu	37	13	32759257	32759257	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	32759257	32759257	G	C	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.3291	p.M1097I	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910	tier1	-	-	98	0	0.00	66	14	17.50
FSD2	0	genome.wustl.edu	37	15	83434004	83434004	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	15	83434004	83434004	G	A	SNP	FSD2	ENST00000334574	human	ensembl	74_37	-1	known	silent	c.1734	p.T578	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,prints_Butyrophylin	-	no_errors	FSD2	HGNC	ENSG00000186628	tier1	-	-	37	0	0.00	16	12	42.86
FXR1	0	genome.wustl.edu	37	3	180666230	180666230	+	Silent	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	180666230	180666230	A	G	SNP	FXR1	ENST00000357559	human	ensembl	74_37	+1	known	silent	c.366	p.K122	1.000	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,superfamily_NA-bd_OB-fold,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR1	HGNC	ENSG00000114416	tier1	-	-	70	0	0.00	48	8	14.29
GABRG1	0	genome.wustl.edu	37	4	46066500	46066500	+	Missense_Mutation	SNP	A	A	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	4	46066500	46066500	A	T	SNP	GABRG1	ENST00000295452	human	ensembl	74_37	-1	known	missense	c.583	p.F195I	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg1_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG1	HGNC	ENSG00000163285	tier1	-	-	137	0	0.00	57	11	16.18
GBP1	0	genome.wustl.edu	37	1	89525062	89525062	+	Silent	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	89525062	89525062	C	T	SNP	GBP1	ENST00000370473	human	ensembl	74_37	-1	known	silent	c.366	p.L122	1.000	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP1	HGNC	ENSG00000117228	tier1	-	-	160	0	0.00	80	8	9.09
GDPD3	0	genome.wustl.edu	37	16	30123665	30123665	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	16	30123665	30123665	C	T	SNP	GDPD3	ENST00000406256	human	ensembl	74_37	-1	known	missense	c.445	p.V149I	0.038	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD3	HGNC	ENSG00000102886	tier1	-	-	92	0	0.00	40	13	24.53
GPATCH8	0	genome.wustl.edu	37	17	42476441	42476441	+	Nonsense_Mutation	SNP	T	T	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	42476441	42476441	T	A	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	nonsense	c.3004	p.R1002*	1.000	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566	tier1	-	-	53	0	0.00	27	4	12.90
GPC5	0	genome.wustl.edu	37	13	92345469	92345469	+	Silent	SNP	A	A	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	92345469	92345469	A	T	SNP	GPC5	ENST00000377067	human	ensembl	74_37	+1	known	silent	c.354	p.A118	1.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399	tier1	-	-	45	0	0.00	15	35	70.00
GPR179	0	genome.wustl.edu	37	17	36499028	36499028	+	Silent	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	36499028	36499028	C	G	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	silent	c.645	p.P215	0.050	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888	tier1	-	-	67	0	0.00	42	5	10.64
GPR37	0	genome.wustl.edu	37	7	124387291	124387291	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	7	124387291	124387291	G	T	SNP	GPR37	ENST00000303921	human	ensembl	74_37	-1	known	missense	c.1130	p.S377Y	0.448	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR37_orph,prints_GPCR_Rhodpsn	-	no_errors	GPR37	HGNC	ENSG00000170775	tier1	-	-	60	0	0.00	35	6	14.63
GTF2H1	0	genome.wustl.edu	37	11	18361172	18361172	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	18361172	18361172	T	C	SNP	GTF2H1	ENST00000265963	human	ensembl	74_37	+1	known	missense	c.575	p.I192T	1.000	pfam_BSD,smart_BSD,pfscan_BSD	pfam_BSD,pfam_TFIIH_BTF_p62_N,smart_BSD,pfscan_BSD	-	no_errors	GTF2H1	HGNC	ENSG00000110768	tier1	-	-	111	0	0.00	63	7	10.00
HNRNPCL1	0	genome.wustl.edu	37	1	12907828	12907828	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	12907828	12907828	G	A	SNP	HNRNPCL1	ENST00000317869	human	ensembl	74_37	-1	known	silent	c.315	p.Y105	0.998	pirsf_hnRNP_C_Raly	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	HNRNPCL1	HGNC	ENSG00000179172	tier1	-	-	112	0	0.00	81	12	12.90
IDO1	0	genome.wustl.edu	37	8	39775661	39775661	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	39775661	39775661	C	T	SNP	IDO1	ENST00000518237	human	ensembl	74_37	+1	known	missense	c.238	p.R80C	0.991	pfam_Indolamine_dOase	pfam_Indolamine_dOase	-	no_errors	IDO1	HGNC	ENSG00000131203	tier1	-	-	125	0	0.00	64	51	44.35
IFT46	0	genome.wustl.edu	37	11	118428468	118428469	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	118428468	118428469	-	CT	INS	IFT46	ENST00000264020	human	ensembl	74_37	-1	known	frame_shift_ins	c.183_182	p.S61fs	0.920:0.873	NULL	pfam_Intraflagellar_transp_cmplxB	-	no_errors	IFT46	HGNC	ENSG00000118096	tier1			114	0	0.00	103	19	15.57
IGF2BP2	0	genome.wustl.edu	37	3	185414441	185414441	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	185414441	185414441	C	G	SNP	IGF2BP2	ENST00000382199	human	ensembl	74_37	-1	known	missense	c.299	p.G100A	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_KH_dom_type_1,pfam_RRM_dom,smart_RRM_dom,smart_KH_dom,pfscan_KH_dom_type_1,pfscan_RRM_dom	-	no_errors	IGF2BP2	HGNC	ENSG00000073792	tier1	-	-	89	0	0.00	48	11	18.33
ILK	0	genome.wustl.edu	37	11	6630832	6630832	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	6630832	6630832	C	T	SNP	ILK	ENST00000299421	human	ensembl	74_37	+1	known	missense	c.818	p.P273L	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Integrin-linked_kinase,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ankyrin_rpt,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Integrin-linked_kinase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ILK	HGNC	ENSG00000166333	tier1	-	-	118	0	0.00	49	6	10.91
KANK4	0	genome.wustl.edu	37	1	62713316	62713316	+	Missense_Mutation	SNP	A	A	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	62713316	62713316	A	T	SNP	KANK4	ENST00000371153	human	ensembl	74_37	-1	known	missense	c.2711	p.V904D	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_KN_motif,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK4	HGNC	ENSG00000132854	tier1	-	-	46	0	0.00	32	4	11.11
KIAA1683	0	genome.wustl.edu	37	19	18368167	18368167	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	18368167	18368167	G	A	SNP	KIAA1683	ENST00000392413	human	ensembl	74_37	-1	known	silent	c.3927	p.S1309	0.000	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC	ENSG00000130518	tier1	-	-	63	0	0.00	37	9	19.57
KIAA2018	0	genome.wustl.edu	37	3	113377491	113377491	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	113377491	113377491	T	G	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.3038	p.K1013T	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1	-	-	162	0	0.00	76	16	17.39
KIAA2018	0	genome.wustl.edu	37	3	113377643	113377643	+	Silent	SNP	T	T	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	113377643	113377643	T	G	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	silent	c.2886	p.S962	0.970	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1	-	-	167	0	0.00	80	12	13.04
KIF20B	0	genome.wustl.edu	37	10	91483747	91483748	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	10	91483747	91483748	-	A	INS	KIF20B	ENST00000416354	human	ensembl	74_37	+1	known	frame_shift_ins	c.1749_1750	p.L586fs	1.000:1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20B	HGNC	ENSG00000138182	tier1			65	0	0.00	29	3	9.38
KLHDC10	0	genome.wustl.edu	37	7	129769339	129769339	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	7	129769339	129769339	C	G	SNP	KLHDC10	ENST00000335420	human	ensembl	74_37	+1	known	missense	c.1042	p.L348V	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1	-	no_errors	KLHDC10	HGNC	ENSG00000128607	tier1	-	-	139	0	0.00	51	25	32.89
LRP1B	0	genome.wustl.edu	37	2	141473667	141473667	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	141473667	141473667	G	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.5898	p.N1966	1.000	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	137	0	0.00	83	8	8.79
MTOR	0	genome.wustl.edu	37	1	11182172	11182172	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	11182172	11182172	T	C	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.6674	p.Y2225C	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793	tier1	-	-	26	0	0.00	16	5	23.81
MUC16	0	genome.wustl.edu	37	19	9073647	9073647	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	9073647	9073647	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.13799	p.T4600I	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	45	0	0.00	25	5	16.67
NBEA	0	genome.wustl.edu	37	13	35692561	35692561	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	35692561	35692561	G	A	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	silent	c.2193	p.S731	1.000	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	21	0	0.00	7	6	46.15
NBEA	0	genome.wustl.edu	37	13	36223864	36223864	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	36223864	36223864	C	-	DEL	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	frame_shift_del	c.7780	p.P2594fs	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1			136	0	0.00	62	30	32.61
NCKAP5L	0	genome.wustl.edu	37	12	50189471	50189471	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	12	50189471	50189471	C	-	DEL	NCKAP5L	ENST00000335999	human	ensembl	74_37	-1	known	frame_shift_del	c.2172	p.I725fs	0.000	NULL	NULL	-	no_errors	NCKAP5L	HGNC	ENSG00000167566	tier1			19	0	0.00	19	2	9.52
NDFIP1	0	genome.wustl.edu	37	5	141511525	141511526	+	RNA	INS	-	-	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	5	141511525	141511526	-	A	INS	NDFIP1	ENST00000509436	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NDFIP1	HGNC	ENSG00000131507	tier1			28	0	0.00	20	3	13.04
NDST1	0	genome.wustl.edu	37	5	149927838	149927838	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	5	149927838	149927838	C	A	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	missense	c.2204	p.T735N	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614	tier1	-	-	57	0	0.00	22	6	21.43
NPIPB1P	0	genome.wustl.edu	37	18	11625952	11625952	+	RNA	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	18	11625952	11625952	G	C	SNP	NPIPB1P	ENST00000547442	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NPIPB1P	HGNC	ENSG00000257513	tier1	-	-	164	0	0.00	113	10	8.13
NRXN1	0	genome.wustl.edu	37	2	51254743	51254743	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	51254743	51254743	G	A	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.669	p.G223	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	16	0	0.00	3	5	62.50
NXPE4	0	genome.wustl.edu	37	11	114465479	114465479	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	114465479	114465479	C	A	SNP	NXPE4	ENST00000375478	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	0.677	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE4	HGNC	ENSG00000137634	tier1	-	-	92	0	0.00	56	9	13.85
OR4S2	0	genome.wustl.edu	37	11	55418592	55418592	+	Nonsense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	55418592	55418592	C	A	SNP	OR4S2	ENST00000312422	human	ensembl	74_37	+1	known	nonsense	c.213	p.Y71*	0.035	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	tier1	-	-	219	0	0.00	126	30	19.23
PAQR9	0	genome.wustl.edu	37	3	142681926	142681926	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	142681926	142681926	G	A	SNP	PAQR9	ENST00000340634	human	ensembl	74_37	-1	known	missense	c.253	p.L85F	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR9	HGNC	ENSG00000188582	tier1	-	-	23	0	0.00	9	5	35.71
PCBP4	0	genome.wustl.edu	37	3	51992878	51992878	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	51992878	51992878	G	C	SNP	PCBP4	ENST00000395014	human	ensembl	74_37	-1	known	missense	c.914	p.A305G	0.997	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	PCBP4	HGNC	ENSG00000090097	tier1	-	-	119	0	0.00	21	9	30.00
PCDH10	0	genome.wustl.edu	37	4	134084218	134084218	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	4	134084218	134084218	G	A	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	missense	c.2884	p.D962N	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	tier1	-	-	116	0	0.00	50	12	19.35
PCDH15	0	genome.wustl.edu	37	10	55912914	55912914	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	10	55912914	55912914	C	T	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.1730	p.R577Q	0.016	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	72	0	0.00	18	11	37.93
PEX1	0	genome.wustl.edu	37	7	92147523	92147523	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	7	92147523	92147523	C	T	SNP	PEX1	ENST00000248633	human	ensembl	74_37	-1	known	missense	c.404	p.R135Q	1.000	pfam_PEX-1N	pfam_ATPase_AAA_core,pfam_Peroxisome_synth_fac_1_a/b,pfam_PEX-1N,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase	-	no_errors	PEX1	HGNC	ENSG00000127980	tier1	-	-	101	0	0.00	40	21	34.43
PGD	0	genome.wustl.edu	37	1	10479548	10479548	+	Silent	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	10479548	10479548	C	T	SNP	PGD	ENST00000270776	human	ensembl	74_37	+1	known	silent	c.1284	p.S428	1.000	pfam_6PGDH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_6PGDH_decarbox	pfam_6PGDH_C,pfam_6PGDH_NADP-bd,superfamily_6-PGluconate_DH_C-like,tigrfam_6PGDH_decarbox	-	no_errors	PGD	HGNC	ENSG00000142657	tier1	-	-	97	0	0.00	40	54	57.45
PHACTR2	0	genome.wustl.edu	37	6	144109947	144109947	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	6	144109947	144109947	G	A	SNP	PHACTR2	ENST00000440869	human	ensembl	74_37	+1	known	missense	c.1745	p.R582Q	1.000	smart_RPEL_repeat,pfscan_RPEL_repeat	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR2	HGNC	ENSG00000112419	tier1	-	-	63	0	0.00	39	8	17.02
PHLPP1	0	genome.wustl.edu	37	18	60570267	60570267	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	18	60570267	60570267	C	G	SNP	PHLPP1	ENST00000262719	human	ensembl	74_37	+1	known	missense	c.2515	p.R839G	0.890	smart_Leu-rich_rpt_typical-subtyp	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom,pfscan_Pleckstrin_homology	-	no_errors	PHLPP1	HGNC	ENSG00000081913	tier1	-	-	61	0	0.00	30	4	11.76
PKD1	0	genome.wustl.edu	37	16	2159273	2159273	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	16	2159273	2159273	G	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	silent	c.5895	p.I1965	0.003	superfamily_PKD_dom,smart_PKD/Chitinase_dom,tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	56	0	0.00	9	9	50.00
PLB1	0	genome.wustl.edu	37	2	28802542	28802542	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	28802542	28802542	G	A	SNP	PLB1	ENST00000422425	human	ensembl	74_37	+1	known	missense	c.1567	p.G523S	0.988	pfam_Lipase_GDSL	pfam_Lipase_GDSL	-	no_errors	PLB1	HGNC	ENSG00000163803	tier1	-	-	165	0	0.00	98	48	32.88
PMS2P3	0	genome.wustl.edu	37	7	75145530	75145530	+	RNA	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	7	75145530	75145530	T	C	SNP	PMS2P3	ENST00000394921	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	PMS2P3	HGNC	ENSG00000127957	tier1	-	-	52	0	0.00	59	7	10.61
POLI	0	genome.wustl.edu	37	18	51820216	51820216	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	18	51820216	51820216	G	A	SNP	POLI	ENST00000579534	human	ensembl	74_37	+1	known	silent	c.1602	p.Q534	0.984	NULL	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,superfamily_DNA_pol_Y-fam_little_finger,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	POLI	HGNC	ENSG00000101751				17	0	0.00	9	2	18.18
POU4F2	0	genome.wustl.edu	37	4	147561240	147561240	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	4	147561240	147561240	G	A	SNP	POU4F2	ENST00000281321	human	ensembl	74_37	+1	known	silent	c.510	p.T170	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615	tier1	-	-	28	0	0.00	8	4	33.33
PRG4	0	genome.wustl.edu	37	1	186277646	186277646	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	186277646	186277646	C	T	SNP	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	missense	c.2795	p.T932I	0.081	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690	tier1	-	-	126	0	0.00	28	26	48.15
PTRF	0	genome.wustl.edu	37	17	40557081	40557081	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	40557081	40557081	G	A	SNP	PTRF	ENST00000357037	human	ensembl	74_37	-1	known	missense	c.797	p.T266M	1.000	NULL	NULL	-	no_errors	PTRF	HGNC	ENSG00000177469	tier1	-	-	65	0	0.00	33	14	29.79
RAB20	0	genome.wustl.edu	37	13	111213750	111213750	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	111213750	111213750	G	A	SNP	RAB20	ENST00000267328	human	ensembl	74_37	-1	known	silent	c.117	p.G39	0.996	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB20	HGNC	ENSG00000139832	tier1	-	-	17	0	0.00	9	6	40.00
RBBP7	0	genome.wustl.edu	37	X	16887282	16887282	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	X	16887282	16887282	A	C	SNP	RBBP7	ENST00000380087	human	ensembl	74_37	-1	known	missense	c.78	p.N26K	1.000	pfam_Histone-bd_RBBP4_N	pfam_WD40_repeat,pfam_Histone-bd_RBBP4_N,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RBBP7	HGNC	ENSG00000102054	tier1	-	-	45	0	0.00	33	10	23.26
RBM26	0	genome.wustl.edu	37	13	79940095	79940095	+	RNA	SNP	A	A	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	79940095	79940095	A	T	SNP	RBM26	ENST00000461008	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RBM26	HGNC	ENSG00000139746	tier1	-	-	16	0	0.00	14	6	30.00
RETSAT	0	genome.wustl.edu	37	2	85576705	85576705	+	Splice_Site	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	85576705	85576705	C	T	SNP	RETSAT	ENST00000295802	human	ensembl	74_37	-1	known	splice_site	c.800-1	e5-1	1.000	-	-	-	no_errors	RETSAT	HGNC	ENSG00000042445	tier1	-	-	25	0	0.00	22	9	29.03
RNA5-8SP2	0	genome.wustl.edu	37	16	33965563	33965563	+	RNA	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	16	33965563	33965563	C	T	SNP	RNA5-8SP2	ENST00000363564	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP2	HGNC	ENSG00000200434	tier1	-	-	36	0	0.00	30	6	16.67
SAAL1	0	genome.wustl.edu	37	11	18127531	18127533	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	18127531	18127533	CCT	-	DEL	SAAL1	ENST00000524803	human	ensembl	74_37	-1	known	in_frame_del	c.58_56	p.E19in_frame_del	0.002:0.001:0.002	NULL	superfamily_ARM-type_fold	-	no_errors	SAAL1	HGNC	ENSG00000166788	tier1			9	0	0.00	1	2	66.67
SAMD15	0	genome.wustl.edu	37	14	77844392	77844392	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	14	77844392	77844392	C	G	SNP	SAMD15	ENST00000216471	human	ensembl	74_37	+1	known	missense	c.631	p.Q211E	0.051	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD15	HGNC	ENSG00000100583	tier1	-	-	60	0	0.00	43	7	14.00
SBNO1	0	genome.wustl.edu	37	12	123810118	123810118	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	12	123810118	123810118	C	A	SNP	SBNO1	ENST00000420886	human	ensembl	74_37	-1	known	missense	c.1904	p.G635V	1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697	tier1	-	-	202	0	0.00	165	36	17.91
SCAPER	0	genome.wustl.edu	37	15	77087632	77087632	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	15	77087632	77087632	G	A	SNP	SCAPER	ENST00000324767	human	ensembl	74_37	-1	known	missense	c.761	p.S254L	0.374	NULL	smart_Znf_U1	-	no_errors	SCAPER	HGNC	ENSG00000140386	tier1	-	-	114	0	0.00	66	7	9.59
SCN2A	0	genome.wustl.edu	37	2	166187845	166187845	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	166187845	166187845	G	C	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.2155	p.E719Q	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	-	-	98	0	0.00	62	10	13.89
SCYL3	0	genome.wustl.edu	37	1	169823714	169823714	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	169823714	169823714	C	A	SNP	SCYL3	ENST00000367770	human	ensembl	74_37	-1	known	missense	c.1866	p.K622N	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_HEAT_type_2,pfscan_Prot_kinase_dom	-	no_errors	SCYL3	HGNC	ENSG00000000457	tier1	-	-	126	0	0.00	70	6	7.89
SHROOM3	0	genome.wustl.edu	37	4	77660209	77660209	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	4	77660209	77660209	C	T	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	missense	c.883	p.L295F	1.000	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	tier1	-	-	44	0	0.00	27	5	15.62
SIPA1L3	0	genome.wustl.edu	37	19	38655374	38655374	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	38655374	38655374	G	A	SNP	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	missense	c.4036	p.G1346R	0.421	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738	tier1	-	-	25	0	0.00	20	6	22.22
SLC25A1	0	genome.wustl.edu	37	22	19163689	19163689	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	22	19163689	19163689	T	C	SNP	SLC25A1	ENST00000215882	human	ensembl	74_37	-1	known	missense	c.890	p.Y297C	0.999	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A1	HGNC	ENSG00000100075	tier1	-	-	154	0	0.00	64	9	12.33
SLC4A11	0	genome.wustl.edu	37	20	3211642	3211642	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	20	3211642	3211642	C	T	SNP	SLC4A11	ENST00000380059	human	ensembl	74_37	-1	known	missense	c.1234	p.A412T	1.000	pfam_HCO3_transpt_C	pfam_HCO3_transpt_C,pfam_PTS_EIIA_type-2_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk	-	no_errors	SLC4A11	HGNC	ENSG00000088836	tier1	-	-	74	0	0.00	51	13	20.31
SLC6A15	0	genome.wustl.edu	37	12	85277680	85277680	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	12	85277680	85277680	C	A	SNP	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	missense	c.714	p.M238I	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041	tier1	-	-	38	0	0.00	24	5	17.24
SLC9A8	0	genome.wustl.edu	37	20	48439644	48439644	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	20	48439644	48439644	T	0	DEL	SLC9A8	ENST00000417961	human	ensembl	74_37	+1	known	frame_shift_del	c.255	p.F86fs	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC	ENSG00000197818				156	0	0.00	172	17	8.99
SMC2	0	genome.wustl.edu	37	9	106885429	106885429	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	9	106885429	106885429	G	A	SNP	SMC2	ENST00000286398	human	ensembl	74_37	+1	known	missense	c.2173	p.E725K	1.000	superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC2	HGNC	ENSG00000136824	tier1	-	-	53	0	0.00	19	10	34.48
SMO	0	genome.wustl.edu	37	7	128846031	128846031	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	7	128846031	128846031	G	A	SNP	SMO	ENST00000249373	human	ensembl	74_37	+1	known	missense	c.961	p.V321M	1.000	pfam_Frizzled,pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,pfam_GPCR_2_secretin-like,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	SMO	HGNC	ENSG00000128602	tier1	-	-	136	0	0.00	63	26	29.21
SNRPN	0	genome.wustl.edu	37	15	25219561	25219561	+	RNA	SNP	A	A	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	15	25219561	25219561	A	C	SNP	SNRPN	ENST00000553597	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNRPN	HGNC	ENSG00000128739	tier1	-	-	83	0	0.00	34	10	22.22
SNX16	0	genome.wustl.edu	37	8	82751863	82751863	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	82751863	82751863	T	G	SNP	SNX16	ENST00000345957	human	ensembl	74_37	-1	known	missense	c.359	p.E120A	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX16	HGNC	ENSG00000104497	tier1	-	-	162	0	0.00	153	22	12.57
SORCS1	0	genome.wustl.edu	37	10	108439088	108439088	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	10	108439088	108439088	T	C	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.1666	p.N556D	0.991	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018	tier1	-	-	131	0	0.00	60	9	13.04
SPATA31A3	0	genome.wustl.edu	37	9	40704212	40704212	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	9	40704212	40704212	G	A	SNP	SPATA31A3	ENST00000356699	human	ensembl	74_37	+1	known	silent	c.1869	p.L623	0.000	NULL	NULL	-	no_errors	SPATA31A3	HGNC	ENSG00000147926	tier1	-	-	88	0	0.00	59	23	28.05
SPRR2A	0	genome.wustl.edu	37	1	153029034	153029034	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	1	153029034	153029034	A	G	SNP	SPRR2A	ENST00000392653	human	ensembl	74_37	-1	known	missense	c.178	p.S60P	0.000	NULL	NULL	-	no_errors	SPRR2A	HGNC	ENSG00000241794	tier1	-	-	195	0	0.00	70	45	39.13
STAB1	0	genome.wustl.edu	37	3	52539106	52539106	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	52539106	52539106	G	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.1465	p.V489M	0.003	superfamily_FAS1_domain,smart_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	147	0	0.00	52	20	27.78
SYNCRIP	0	genome.wustl.edu	37	6	86329066	86329066	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	6	86329066	86329066	G	A	SNP	SYNCRIP	ENST00000369622	human	ensembl	74_37	-1	known	nonsense	c.1078	p.Q360*	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	SYNCRIP	HGNC	ENSG00000135316	tier1	-	-	75	0	0.00	50	18	26.47
TAS2R8	0	genome.wustl.edu	37	12	10958845	10958846	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	12	10958845	10958846	-	A	INS	TAS2R8	ENST00000240615	human	ensembl	74_37	-1	known	frame_shift_ins	c.735_734	p.L246fs	0.000:0.001	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	TAS2R8	HGNC	ENSG00000121314	tier1			67	0	0.00	23	12	34.29
TBC1D3F	0	genome.wustl.edu	37	17	36288251	36288251	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	36288251	36288251	G	C	SNP	TBC1D3F	ENST00000327454	human	ensembl	74_37	+1	known	missense	c.337	p.V113L	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D3F	HGNC	ENSG00000185128	tier1	-	-	732	0	0.00	359	53	12.86
TBC1D3P5	0	genome.wustl.edu	37	17	25753494	25753494	+	RNA	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	25753494	25753494	C	A	SNP	TBC1D3P5	ENST00000586223	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TBC1D3P5	HGNC	ENSG00000266433	tier1	-	-	61	0	0.00	40	10	20.00
TENM1	0	genome.wustl.edu	37	X	123540242	123540243	+	Frame_Shift_Ins	INS	-	-	TA			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	X	123540242	123540243	-	TA	INS	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	frame_shift_ins	c.5080_5079	p.D1693fs	1.000:0.851	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694	tier1			120	0	0.00	51	30	37.04
THSD7B	0	genome.wustl.edu	37	2	137814476	137814476	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	137814476	137814476	C	T	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	missense	c.626	p.P209L	0.984	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	tier1	-	-	252	0	0.00	125	49	28.16
THSD7B	0	genome.wustl.edu	37	2	138400112	138400112	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	138400112	138400112	C	T	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	missense	c.3863	p.P1288L	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	tier1	-	-	109	0	0.00	54	8	12.90
TLN1	0	genome.wustl.edu	37	9	35700200	35700200	+	Silent	SNP	A	A	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	9	35700200	35700200	A	T	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	silent	c.6648	p.L2216	0.998	NULL	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076	tier1	-	-	93	0	0.00	39	6	13.33
TMF1	0	genome.wustl.edu	37	3	69097302	69097302	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	69097302	69097302	G	A	SNP	TMF1	ENST00000543976	human	ensembl	74_37	-1	known	missense	c.554	p.S185L	0.051	NULL	pfam_TMF_TATA-bd,pfam_TMF_DNA-bd	-	no_errors	TMF1	HGNC	ENSG00000144747				160	0	0.00	73	4	5.19
TOP1MT	0	genome.wustl.edu	37	8	144407589	144407589	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	144407589	144407589	G	A	SNP	TOP1MT	ENST00000329245	human	ensembl	74_37	-1	known	missense	c.598	p.R200C	1.000	pfam_TopoI_DNA-bd_euk,superfamily_TopoI_DNA-bd_euk,smart_TopoI_euk,prints_TopoI	pfam_TopoI_DNA-bd_euk,pfam_TopoI_cat_euk,superfamily_TopoI_DNA-bd_euk,superfamily_DNA_brk_join_enz,smart_TopoI_euk,prints_TopoI	-	no_errors	TOP1MT	HGNC	ENSG00000184428	tier1	rs146761712	-	72	0	0.00	45	12	21.05
TOR1B	0	genome.wustl.edu	37	9	132569559	132569559	+	Silent	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	9	132569559	132569559	C	A	SNP	TOR1B	ENST00000259339	human	ensembl	74_37	+1	known	silent	c.558	p.I186	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,pirsf_Torsin_subgr	pfam_Torsin,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,pirsf_Torsin_subgr	-	no_errors	TOR1B	HGNC	ENSG00000136816	tier1	-	-	159	0	0.00	63	21	25.00
TP53	0	genome.wustl.edu	37	17	7578263	7578263	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	17	7578263	7578263	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.586	p.R196*	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	56	0	0.00	11	15	57.69
TPM2	0	genome.wustl.edu	37	9	35685726	35685726	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	9	35685726	35685726	C	T	SNP	TPM2	ENST00000360958	human	ensembl	74_37	-1	known	missense	c.292	p.E98K	1.000	pfam_Tropomyosin,prints_Tropomyosin	pfam_Tropomyosin,prints_Tropomyosin	-	no_errors	TPM2	HGNC	ENSG00000198467	tier1	-	-	89	0	0.00	44	14	24.14
TRIM28	0	genome.wustl.edu	37	19	59061584	59061584	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	59061584	59061584	A	G	SNP	TRIM28	ENST00000253024	human	ensembl	74_37	+1	known	missense	c.2264	p.Y755C	0.721	superfamily_Bromodomain,smart_Bromodomain	pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	TRIM28	HGNC	ENSG00000130726	tier1	-	-	47	0	0.00	15	8	34.78
TRIM3	0	genome.wustl.edu	37	11	6477712	6477712	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	6477712	6477712	C	T	SNP	TRIM3	ENST00000345851	human	ensembl	74_37	-1	known	missense	c.1244	p.R415H	0.996	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM3	HGNC	ENSG00000110171				26	0	0.00	3	2	40.00
TRPS1	0	genome.wustl.edu	37	8	116599813	116599813	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	116599813	116599813	G	A	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	silent	c.2115	p.Y705	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447	tier1	-	-	117	0	0.00	105	12	10.26
TRUB2	0	genome.wustl.edu	37	9	131072106	131072106	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	9	131072106	131072106	T	C	SNP	TRUB2	ENST00000372890	human	ensembl	74_37	-1	known	missense	c.719	p.H240R	1.000	superfamily_PsdUridine_synth_cat_dom	pfam_PsdUridine_synth,superfamily_PsdUridine_synth_cat_dom	-	no_errors	TRUB2	HGNC	ENSG00000167112				60	0	0.00	25	3	10.71
TSTA3	0	genome.wustl.edu	37	8	144695748	144695748	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	144695748	144695748	G	C	SNP	TSTA3	ENST00000425753	human	ensembl	74_37	-1	known	missense	c.756	p.I252M	1.000	NULL	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct	-	no_errors	TSTA3	HGNC	ENSG00000104522	tier1	-	-	33	0	0.00	15	6	28.57
TTI1	0	genome.wustl.edu	37	20	36642206	36642206	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	20	36642206	36642206	C	G	SNP	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	missense	c.13	p.D5H	1.000	pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407	tier1	-	-	135	0	0.00	106	16	13.01
U2SURP	0	genome.wustl.edu	37	3	142762048	142762048	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	3	142762048	142762048	T	A	SNP	U2SURP	ENST00000473835	human	ensembl	74_37	+1	known	missense	c.2474	p.M825K	1.000	NULL	pfam_Surp,pfam_RRM_dom,superfamily_Surp,superfamily_ENTH_VHS,smart_RRM_dom,smart_Surp,smart_CID_dom,pfscan_Surp,pfscan_RRM_dom	-	no_errors	U2SURP	HGNC	ENSG00000163714	tier1	-	-	18	0	0.00	5	5	50.00
UBAC2	0	genome.wustl.edu	37	13	100037499	100037499	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	100037499	100037499	G	T	SNP	UBAC2	ENST00000376440	human	ensembl	74_37	+1	known	missense	c.840	p.E280D	1.000	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAC2	HGNC	ENSG00000134882	tier1	-	-	71	0	0.00	17	50	74.63
UBASH3B	0	genome.wustl.edu	37	11	122650400	122650400	+	Missense_Mutation	SNP	A	A	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	122650400	122650400	A	T	SNP	UBASH3B	ENST00000284273	human	ensembl	74_37	+1	known	missense	c.598	p.T200S	1.000	superfamily_RNA_ligase/cNuc_Pdiesterase	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_SH3_domain,superfamily_RNA_ligase/cNuc_Pdiesterase,smart_UBA/transl_elong_EF1B_N_euk,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3B	HGNC	ENSG00000154127	tier1	-	-	63	0	0.00	39	12	23.53
USE1	0	genome.wustl.edu	37	19	17330523	17330523	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	17330523	17330523	G	T	SNP	USE1	ENST00000263897	human	ensembl	74_37	+1	known	missense	c.681	p.Q227H	1.000	pfam_Vesicle_transport_protein_Use1	pfam_Vesicle_transport_protein_Use1	-	no_errors	USE1	HGNC	ENSG00000053501	tier1	-	-	103	0	0.00	38	16	29.63
USP29	0	genome.wustl.edu	37	19	57642046	57642046	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	57642046	57642046	A	C	SNP	USP29	ENST00000254181	human	ensembl	74_37	+1	known	missense	c.2003	p.K668T	0.114	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP29	HGNC	ENSG00000131864	tier1	-	-	32	0	0.00	25	5	16.67
USP9Y	0	genome.wustl.edu	37	Y	14924932	14924932	+	Silent	SNP	C	C	G			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	Y	14924932	14924932	C	G	SNP	USP9Y	ENST00000338981	human	ensembl	74_37	+1	known	silent	c.4554	p.L1518	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,superfamily_Glycoside_hydrolase_SF,pfscan_Peptidase_C19/C67	-	no_errors	USP9Y	HGNC	ENSG00000114374	tier1	-	-	46	0	0.00	30	8	20.51
VSNL1	0	genome.wustl.edu	37	2	17773404	17773404	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	2	17773404	17773404	G	A	SNP	VSNL1	ENST00000295156	human	ensembl	74_37	+1	known	silent	c.63	p.E21	1.000	prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	VSNL1	HGNC	ENSG00000163032	tier1	-	-	102	0	0.00	75	29	27.88
VWCE	0	genome.wustl.edu	37	11	61048588	61048588	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	11	61048588	61048588	G	A	SNP	VWCE	ENST00000335613	human	ensembl	74_37	-1	known	missense	c.907	p.P303S	0.975	NULL	pfam_VWF_C,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWF_C,smart_VWC_out,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	VWCE	HGNC	ENSG00000167992	tier1	-	-	54	0	0.00	46	14	23.33
WASF3	0	genome.wustl.edu	37	13	27259947	27259947	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	13	27259947	27259947	G	A	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	missense	c.1474	p.D492N	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970	tier1	-	-	52	0	0.00	30	4	11.76
ZCCHC2	0	genome.wustl.edu	37	18	60243776	60243776	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	18	60243776	60243776	C	-	DEL	ZCCHC2	ENST00000269499	human	ensembl	74_37	+1	known	frame_shift_del	c.3501	p.P1169fs	1.000	NULL	pfam_Znf_CCHC,superfamily_Phox,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC2	HGNC	ENSG00000141664	tier1			47	0	0.00	26	2	7.14
ZFHX4	0	genome.wustl.edu	37	8	77619911	77619911	+	Silent	SNP	T	T	C			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	77619911	77619911	T	C	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	silent	c.2721	p.A907	1.000	smart_Znf_C2H2-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	75	0	0.00	42	8	16.00
ZFHX4	0	genome.wustl.edu	37	8	77776510	77776510	+	Nonsense_Mutation	SNP	C	C	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	8	77776510	77776510	C	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	nonsense	c.10560	p.C3520*	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	66	0	0.00	32	6	15.79
ZNF292	0	genome.wustl.edu	37	6	87969690	87969690	+	Nonsense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	6	87969690	87969690	C	T	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	nonsense	c.6343	p.R2115*	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994	tier1	-	-	99	0	0.00	64	8	11.11
ZNF560	0	genome.wustl.edu	37	19	9583910	9583910	+	Silent	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	9583910	9583910	G	A	SNP	ZNF560	ENST00000301480	human	ensembl	74_37	-1	known	silent	c.183	p.V61	0.000	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF560	HGNC	ENSG00000198028	tier1	-	-	211	0	0.00	118	36	23.38
ZNF585A	0	genome.wustl.edu	37	19	37643387	37643387	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	37643387	37643387	C	T	SNP	ZNF585A	ENST00000356958	human	ensembl	74_37	-1	known	missense	c.1414	p.G472R	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585A	HGNC	ENSG00000196967	tier1	-	-	288	0	0.00	267	17	5.99
ZNF615	0	genome.wustl.edu	37	19	52496987	52496987	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-A8PE-01A-11D-A410-08	TCGA-VQ-A8PE-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c854b2f-cee6-4a3a-9868-7f7aab2dffdc	69460bfc-2305-402b-847b-ea8247913189	19	52496987	52496987	G	A	SNP	ZNF615	ENST00000594083	human	ensembl	74_37	-1	known	nonsense	c.1375	p.R459*	0.173	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF615	HGNC	ENSG00000197619	tier1	-	-	65	0	0.00	24	21	46.67
