Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCB10	0	genome.wustl.edu	37	1	229685137	229685137	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	229685137	229685137	C	T	SNP	ABCB10	ENST00000344517	human	ensembl	74_37	-1	known	missense	c.562	p.A188T	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB10	HGNC	ENSG00000135776	tier1	-	-	26	0	0.00	17	7	29.17
ABCD3	0	genome.wustl.edu	37	1	94982784	94982785	+	RNA	INS	-	-	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	94982784	94982785	-	A	INS	ABCD3	ENST00000464165	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.274:0.002	-	-	-	no_errors	ABCD3	HGNC	ENSG00000117528	tier1			27	0	0.00	18	3	14.29
ACAN	0	genome.wustl.edu	37	15	89400524	89400524	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	15	89400524	89400524	C	T	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	missense	c.4708	p.P1570S	0.393	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766	tier1	-	-	94	0	0.00	70	11	13.58
ACVR2A	0	genome.wustl.edu	37	2	148602753	148602753	+	Missense_Mutation	SNP	T	T	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	148602753	148602753	T	A	SNP	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	missense	c.32	p.V11D	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989	tier1	-	-	73	0	0.00	66	18	21.43
ADAM17	0	genome.wustl.edu	37	2	9663399	9663399	+	Silent	SNP	G	G	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	9663399	9663399	G	C	SNP	ADAM17	ENST00000310823	human	ensembl	74_37	-1	known	silent	c.822	p.G274	0.933	pfscan_Peptidase_M12B	pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM17	HGNC	ENSG00000151694	tier1	-	-	94	0	0.00	112	16	12.50
AMD1	0	genome.wustl.edu	37	6	111213629	111213629	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	6	111213629	111213629	G	C	SNP	AMD1	ENST00000368885	human	ensembl	74_37	+1	known	missense	c.598	p.A200P	1.000	pfam_S-AdoMet_decarboxylase,superfamily_S-AdoMet_deCO2ase_core,pirsf_S-AdoMet_decarboxylase_subgr,tigrfam_S-AdoMet_decarboxylase_subgr	pfam_S-AdoMet_decarboxylase,superfamily_S-AdoMet_deCO2ase_core,pirsf_S-AdoMet_decarboxylase_subgr,tigrfam_S-AdoMet_decarboxylase_subgr	-	no_errors	AMD1	HGNC	ENSG00000123505	tier1	-	-	100	0	0.00	66	15	18.52
AMER2	0	genome.wustl.edu	37	13	25744090	25744091	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	13	25744090	25744091	AT	-	DEL	AMER2	ENST00000515384	human	ensembl	74_37	-1	known	frame_shift_del	c.1668_1667	p.Y556fs	0.926:0.994	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	-	no_errors	AMER2	HGNC	ENSG00000165566	tier1			60	0	0.00	41	4	8.89
AMER2	0	genome.wustl.edu	37	13	25744091	25744091	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	13	25744091	25744091	T	G	SNP	AMER2	ENST00000515384	human	ensembl	74_37	-1	known	missense	c.1667	p.Y556S	0.994	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	-	no_errors	AMER2	HGNC	ENSG00000165566	tier1	-	-	59	0	0.00	36	5	12.20
ARHGAP36	0	genome.wustl.edu	37	X	130219900	130219900	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	X	130219900	130219900	G	A	SNP	ARHGAP36	ENST00000276211	human	ensembl	74_37	+1	known	missense	c.1118	p.R373H	0.996	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP36	HGNC	ENSG00000147256	tier1	-	-	131	0	0.00	52	120	69.77
ARHGEF11	0	genome.wustl.edu	37	1	156914897	156914898	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	156914897	156914898	TC	-	DEL	ARHGEF11	ENST00000368194	human	ensembl	74_37	-1	known	frame_shift_del	c.2905_2904	p.N969fs	1.000:1.000	superfamily_DH-domain	pfam_RGS-like_dom,pfam_DH-domain,pfam_PDZ,pfam_RGS_dom,superfamily_DH-domain,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_Regulat_G_prot_signal_superfam,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_DH-domain	-	no_errors	ARHGEF11	HGNC	ENSG00000132694	tier1			134	0	0.00	101	39	27.86
ASB10	0	genome.wustl.edu	37	7	150878216	150878216	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	150878216	150878216	C	T	SNP	ASB10	ENST00000422024	human	ensembl	74_37	-1	known	missense	c.1049	p.G350D	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB10	HGNC	ENSG00000146926	tier1	-	-	42	0	0.00	17	15	45.45
BTBD3	0	genome.wustl.edu	37	20	11898962	11898964	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	20	11898962	11898964	CTT	-	DEL	BTBD3	ENST00000378226	human	ensembl	74_37	+1	known	in_frame_del	c.39_41	p.F15in_frame_del	1.000:1.000:1.000	NULL	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD3	HGNC	ENSG00000132640	tier1			254	0	0.00	221	68	23.53
BTN3A3	0	genome.wustl.edu	37	6	26444340	26444340	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	6	26444340	26444340	G	C	SNP	BTN3A3	ENST00000244519	human	ensembl	74_37	+1	known	missense	c.241	p.D81H	0.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like_dom,prints_Butyrophylin	-	no_errors	BTN3A3	HGNC	ENSG00000111801	tier1	-	-	110	0	0.00	80	24	23.08
C1orf186	0	genome.wustl.edu	37	1	206239537	206239537	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	206239537	206239537	G	A	SNP	C1orf186	ENST00000331555	human	ensembl	74_37	-1	novel	missense	c.361	p.P121S	0.000	NULL	NULL	-	no_errors	C1orf186	HGNC	ENSG00000196533	tier1	-	-	49	0	0.00	60	5	7.69
CALD1	0	genome.wustl.edu	37	7	134632475	134632475	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	134632475	134632475	G	A	SNP	CALD1	ENST00000361388	human	ensembl	74_37	+1	known	silent	c.1062	p.E354	1.000	pfam_Caldesmon_LSP	pfam_Caldesmon_LSP,prints_Caldesmon	-	no_errors	CALD1	HGNC	ENSG00000122786	tier1	-	-	21	0	0.00	8	9	52.94
CCDC13	0	genome.wustl.edu	37	3	42798565	42798565	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	3	42798565	42798565	G	A	SNP	CCDC13	ENST00000310232	human	ensembl	74_37	-1	known	silent	c.363	p.A121	0.999	NULL	superfamily_Prefoldin	-	no_errors	CCDC13	HGNC	ENSG00000244607	tier1	-	-	76	0	0.00	71	25	26.04
CCKBR	0	genome.wustl.edu	37	11	6291461	6291461	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	6291461	6291461	G	A	SNP	CCKBR	ENST00000525462	human	ensembl	74_37	+1	known	missense	c.547	p.G183R	0.030	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Gastrin_rcpt,prints_Cholcskin_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	CCKBR	HGNC	ENSG00000110148	tier1	-	-	46	0	0.00	27	13	32.50
CCT6B	0	genome.wustl.edu	37	17	33258013	33258013	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	33258013	33258013	C	T	SNP	CCT6B	ENST00000314144	human	ensembl	74_37	-1	known	missense	c.1405	p.E469K	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_zeta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_zeta	-	no_errors	CCT6B	HGNC	ENSG00000132141	tier1	-	-	83	0	0.00	95	21	18.10
CDKN2A	0	genome.wustl.edu	37	9	21971120	21971120	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	9	21971120	21971120	G	A	SNP	CDKN2A	ENST00000446177	human	ensembl	74_37	-1	known	nonsense	c.238	p.R80*	0.990	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889	tier1	rs121913388	-	20	0	0.00	4	12	75.00
CNTN6	0	genome.wustl.edu	37	3	1415615	1415615	+	Missense_Mutation	SNP	A	A	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	3	1415615	1415615	A	T	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.1953	p.E651D	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	113	0	0.00	75	12	13.79
CNTNAP4	0	genome.wustl.edu	37	16	76569471	76569471	+	Silent	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	16	76569471	76569471	C	T	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	silent	c.2782	p.L928	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	tier1	-	-	78	0	0.00	57	20	25.97
COL11A1	0	genome.wustl.edu	37	1	103380319	103380319	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	103380319	103380319	C	A	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.3901	p.A1301S	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	21	0	0.00	10	6	37.50
CREBBP	0	genome.wustl.edu	37	16	3781862	3781862	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	16	3781862	3781862	C	T	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	missense	c.4805	p.R1602H	1.000	pfam_Histone_H3-K56_AcTrfase_RTT109	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	tier1	-	-	95	0	0.00	99	19	16.10
CSMD2	0	genome.wustl.edu	37	1	33998789	33998789	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	33998789	33998789	G	A	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	silent	c.10032	p.N3344	0.984	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	18	0	0.00	11	7	38.89
CTDSPL	0	genome.wustl.edu	37	3	38012952	38012952	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	3	38012952	38012952	C	T	SNP	CTDSPL	ENST00000273179	human	ensembl	74_37	+1	known	missense	c.481	p.L161F	1.000	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF,tigrfam_Dullard_phosphatase	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF,tigrfam_Dullard_phosphatase	-	no_errors	CTDSPL	HGNC	ENSG00000144677				42	0	0.00	33	4	10.81
CYP7B1	0	genome.wustl.edu	37	8	65527756	65527756	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	8	65527756	65527756	G	T	SNP	CYP7B1	ENST00000310193	human	ensembl	74_37	-1	known	missense	c.884	p.A295E	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817	tier1	-	-	34	0	0.00	28	16	35.56
DLEU7	0	genome.wustl.edu	37	13	51417425	51417425	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	13	51417425	51417425	C	T	SNP	DLEU7	ENST00000504404	human	ensembl	74_37	-1	known	missense	c.358	p.A120T	0.995	NULL	NULL	-	no_errors	DLEU7	HGNC	ENSG00000186047	tier1	-	-	21	0	0.00	16	7	30.43
DNM1P46	0	genome.wustl.edu	37	15	100340362	100340362	+	RNA	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	15	100340362	100340362	C	T	SNP	DNM1P46	ENST00000341853	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	tier1	-	-	26	0	0.00	15	6	28.57
DOCK2	0	genome.wustl.edu	37	5	169474564	169474564	+	Silent	SNP	A	A	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	5	169474564	169474564	A	G	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	silent	c.4017	p.K1339	0.995	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516	tier1	-	-	86	0	0.00	52	30	36.59
DOT1L	0	genome.wustl.edu	37	19	2226927	2226927	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	2226927	2226927	G	A	SNP	DOT1L	ENST00000398665	human	ensembl	74_37	+1	known	silent	c.4407	p.P1469	0.078	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885	tier1	-	-	26	0	0.00	9	7	43.75
EIF1AY	0	genome.wustl.edu	37	Y	22749994	22749994	+	RNA	DEL	A	A	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	Y	22749994	22749994	A	-	DEL	EIF1AY	ENST00000464196	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.985	-	-	-	no_errors	EIF1AY	HGNC	ENSG00000198692	tier1			9	0	0.00	4	2	33.33
EMILIN3	0	genome.wustl.edu	37	20	39991417	39991417	+	Silent	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	20	39991417	39991417	G	T	SNP	EMILIN3	ENST00000332312	human	ensembl	74_37	-1	known	silent	c.792	p.T264	1.000	NULL	pfam_EMI_domain,pfscan_EMI_domain	-	no_errors	EMILIN3	HGNC	ENSG00000183798	tier1	-	-	70	0	0.00	40	22	35.48
ENSG00000254815	0	genome.wustl.edu	37	11	558078	558078	+	RNA	SNP	T	T	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	558078	558078	T	C	SNP	ENSG00000254815	ENST00000527620	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-496I9.1	Clone_based_vega_gene	ENSG00000254815	tier1	-	-	55	0	0.00	48	14	22.58
EPHA3	0	genome.wustl.edu	37	3	89456459	89456459	+	Silent	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	3	89456459	89456459	C	T	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	silent	c.1635	p.I545	0.003	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524	tier1	rs200724434	-	43	0	0.00	59	16	21.33
ERCC3	0	genome.wustl.edu	37	2	128051230	128051230	+	Silent	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	128051230	128051230	C	T	SNP	ERCC3	ENST00000285398	human	ensembl	74_37	-1	known	silent	c.93	p.G31	0.687	NULL	pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_Helicase_Ercc3,tigrfam_Helicase_Ercc3	-	no_errors	ERCC3	HGNC	ENSG00000163161	tier1	-	-	69	0	0.00	63	7	10.00
EVPL	0	genome.wustl.edu	37	17	74006588	74006588	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	74006588	74006588	C	T	SNP	EVPL	ENST00000301607	human	ensembl	74_37	-1	known	missense	c.2698	p.A900T	0.000	NULL	pfam_Plectin_repeat,superfamily_Ferritin-like_SF,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880	tier1	-	-	37	0	0.00	32	9	21.95
EYA4	0	genome.wustl.edu	37	6	133789787	133789787	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	6	133789787	133789787	G	A	SNP	EYA4	ENST00000355167	human	ensembl	74_37	+1	known	silent	c.888	p.S296	0.684	NULL	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA4	HGNC	ENSG00000112319	tier1	-	-	66	0	0.00	58	18	23.68
EZH1	0	genome.wustl.edu	37	17	40872369	40872369	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	40872369	40872369	C	T	SNP	EZH1	ENST00000428826	human	ensembl	74_37	-1	known	missense	c.586	p.D196N	0.947	smart_SANT/Myb	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH1	HGNC	ENSG00000108799	tier1	-	-	63	0	0.00	64	24	27.27
FILIP1	0	genome.wustl.edu	37	6	76024397	76024397	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	6	76024397	76024397	C	T	SNP	FILIP1	ENST00000237172	human	ensembl	74_37	-1	known	missense	c.1151	p.R384Q	1.000	NULL	pfam_Cortactin-binding_p2_N,prints_Tropomyosin	-	no_errors	FILIP1	HGNC	ENSG00000118407	tier1	rs147080592	-	177	0	0.00	98	29	22.66
FKBP7	0	genome.wustl.edu	37	2	179343268	179343268	+	RNA	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	179343268	179343268	G	A	SNP	FKBP7	ENST00000464248	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FKBP7	HGNC	ENSG00000079150	tier1	-	-	100	0	0.00	143	27	15.88
FLJ20444	0	genome.wustl.edu	37	9	66513587	66513587	+	RNA	SNP	T	T	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	9	66513587	66513587	T	G	SNP	FLJ20444	ENST00000586625	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-262H14.3	Clone_based_vega_gene	ENSG00000234665	tier1	rs200425428	-	11	0	0.00	13	9	40.91
FUT10	0	genome.wustl.edu	37	8	33247251	33247251	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	8	33247251	33247251	G	C	SNP	FUT10	ENST00000327671	human	ensembl	74_37	-1	known	missense	c.442	p.H148D	1.000	pfam_Glyco_trans_10,pirsf_Alpha-1_3-FUT_met	pfam_Glyco_trans_10,pirsf_Alpha-1_3-FUT_met	-	no_errors	FUT10	HGNC	ENSG00000172728	tier1	-	-	118	0	0.00	59	42	41.58
GPR141	0	genome.wustl.edu	37	7	37780483	37780483	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	37780483	37780483	A	G	SNP	GPR141	ENST00000334425	human	ensembl	74_37	+1	known	missense	c.488	p.E163G	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR141	HGNC	ENSG00000187037	tier1	-	-	75	0	0.00	85	29	25.44
GTF3C3	0	genome.wustl.edu	37	2	197639839	197639839	+	Splice_Site	SNP	C	C	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	197639839	197639839	C	G	SNP	GTF3C3	ENST00000263956	human	ensembl	74_37	-1	known	splice_site	c.1831+1	e13+1	1.000	-	-	-	no_errors	GTF3C3	HGNC	ENSG00000119041	tier1	-	-	56	0	0.00	39	15	27.78
H1FX-AS1	0	genome.wustl.edu	37	3	129042828	129042828	+	RNA	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	3	129042828	129042828	C	T	SNP	H1FX-AS1	ENST00000502789	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.242	-	-	-	no_errors	H1FX-AS1	HGNC	ENSG00000206417	tier1	-	-	24	0	0.00	18	8	29.63
HIST1H4L	0	genome.wustl.edu	37	6	27841205	27841205	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	6	27841205	27841205	C	G	SNP	HIST1H4L	ENST00000355981	human	ensembl	74_37	-1	known	missense	c.84	p.Q28H	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4L	HGNC	ENSG00000198558	tier1	-	-	55	0	0.00	48	6	11.11
HMX2	0	genome.wustl.edu	37	10	124908149	124908149	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	10	124908149	124908149	T	-	DEL	HMX2	ENST00000339992	human	ensembl	74_37	+1	known	frame_shift_del	c.255	p.P87fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HMX2	HGNC	ENSG00000188816	tier1			51	0	0.00	35	2	5.41
HOXB7	0	genome.wustl.edu	37	17	46688089	46688090	+	Frame_Shift_Ins	INS	-	-	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	46688089	46688090	-	C	INS	HOXB7	ENST00000239165	human	ensembl	74_37	-1	known	frame_shift_ins	c.192_191	p.M65fs	1.000:1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXB7	HGNC	ENSG00000260027	tier1			21	0	0.00	18	3	14.29
HPSE2	0	genome.wustl.edu	37	10	100481499	100481499	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	10	100481499	100481499	G	T	SNP	HPSE2	ENST00000370552	human	ensembl	74_37	-1	known	missense	c.871	p.Q291K	1.000	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE2	HGNC	ENSG00000172987	tier1	-	-	115	0	0.00	101	34	25.19
HS6ST1	0	genome.wustl.edu	37	2	129025965	129025965	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	129025965	129025965	C	T	SNP	HS6ST1	ENST00000259241	human	ensembl	74_37	-1	known	missense	c.1007	p.R336H	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	tier1	-	-	48	0	0.00	43	27	38.57
HS6ST1	0	genome.wustl.edu	37	2	129075939	129075939	+	Nonsense_Mutation	SNP	T	T	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	129075939	129075939	T	A	SNP	HS6ST1	ENST00000259241	human	ensembl	74_37	-1	known	nonsense	c.199	p.K67*	1.000	NULL	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	tier1	rs202247387	-	45	0	0.00	44	5	10.20
IRGC	0	genome.wustl.edu	37	19	44223140	44223140	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	44223140	44223140	C	T	SNP	IRGC	ENST00000244314	human	ensembl	74_37	+1	known	missense	c.430	p.R144C	0.862	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	-	no_errors	IRGC	HGNC	ENSG00000124449	tier1	-	-	23	0	0.00	9	10	52.63
ITFG1	0	genome.wustl.edu	37	16	47494837	47494837	+	Silent	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	16	47494837	47494837	C	T	SNP	ITFG1	ENST00000320640	human	ensembl	74_37	-1	known	silent	c.120	p.E40	1.000	NULL	NULL	-	no_errors	ITFG1	HGNC	ENSG00000129636	tier1	-	-	33	0	0.00	22	7	24.14
ITGAL	0	genome.wustl.edu	37	16	30485517	30485517	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	16	30485517	30485517	C	T	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	missense	c.62	p.A21V	0.001	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844	tier1	-	-	10	0	0.00	10	5	33.33
KHK	0	genome.wustl.edu	37	2	27317348	27317348	+	Silent	SNP	T	T	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	27317348	27317348	T	C	SNP	KHK	ENST00000260599	human	ensembl	74_37	+1	known	silent	c.213	p.F71	1.000	pfam_PfkB_dom	pfam_PfkB_dom	-	no_errors	KHK	HGNC	ENSG00000138030	tier1	-	-	103	0	0.00	74	36	32.43
KIAA0907	0	genome.wustl.edu	37	1	155903495	155903497	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	155903495	155903497	CAG	-	DEL	KIAA0907	ENST00000368321	human	ensembl	74_37	-1	known	in_frame_del	c.184_182	p.A61in_frame_del	1.000:0.057:0.997	NULL	NULL	-	no_errors	KIAA0907	HGNC	ENSG00000132680	tier1			33	0	0.00	36	2	5.26
KMT2A	0	genome.wustl.edu	37	11	118352737	118352737	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	118352737	118352737	G	A	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	silent	c.3942	p.P1314	0.005	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058	tier1	-	-	41	0	0.00	32	9	21.95
KNDC1	0	genome.wustl.edu	37	10	135025189	135025189	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	10	135025189	135025189	C	-	DEL	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	frame_shift_del	c.4069	p.L1358fs	0.996	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798	tier1			51	0	0.00	33	12	26.67
KRT38	0	genome.wustl.edu	37	17	39595484	39595484	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	39595484	39595484	G	A	SNP	KRT38	ENST00000246646	human	ensembl	74_37	-1	known	nonsense	c.703	p.Q235*	0.996	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT38	HGNC	ENSG00000171360				34	0	0.00	30	6	16.67
LDHA	0	genome.wustl.edu	37	11	18427050	18427051	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	18427050	18427051	TG	-	DEL	LDHA	ENST00000540430	human	ensembl	74_37	+1	known	frame_shift_del	c.852_853	p.V285fs	0.999:1.000	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,tigrfam_L-lactate_DH	pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	-	no_errors	LDHA	HGNC	ENSG00000134333	tier1			93	0	0.00	74	13	14.94
LILRP2	0	genome.wustl.edu	37	19	55221420	55221420	+	RNA	SNP	C	C	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	55221420	55221420	C	G	SNP	LILRP2	ENST00000413439	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	LILRP2	HGNC	ENSG00000170858	tier1	-	-	25	0	0.00	35	10	22.22
LOC101927905	0	genome.wustl.edu	37	12	8388252	8388252	+	RNA	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	12	8388252	8388252	C	T	SNP	LOC101927905	ENST00000304751	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	RP11-266K4.9	Clone_based_vega_gene	ENSG00000215241	tier1	-	-	38	0	0.00	7	20	74.07
LOC284100	0	genome.wustl.edu	37	17	36233832	36233832	+	RNA	SNP	T	T	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	36233832	36233832	T	A	SNP	LOC284100	ENST00000590732	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-115K3.2	Clone_based_vega_gene	ENSG00000267671	tier1	-	-	29	0	0.00	23	19	45.24
LRIG2	0	genome.wustl.edu	37	1	113657114	113657114	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	113657114	113657114	C	G	SNP	LRIG2	ENST00000361127	human	ensembl	74_37	+1	known	missense	c.2146	p.Q716E	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG2	HGNC	ENSG00000198799	tier1	-	-	59	0	0.00	28	23	45.10
LRIT1	0	genome.wustl.edu	37	10	85991841	85991841	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	10	85991841	85991841	C	T	SNP	LRIT1	ENST00000372105	human	ensembl	74_37	-1	known	missense	c.1714	p.V572I	0.880	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRIT1	HGNC	ENSG00000148602	tier1	-	-	41	0	0.00	20	5	20.00
LRP1B	0	genome.wustl.edu	37	2	141739804	141739804	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	141739804	141739804	G	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.2812	p.R938C	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	57	0	0.00	36	17	31.48
LRP5	0	genome.wustl.edu	37	11	68201222	68201222	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	68201222	68201222	G	A	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	missense	c.3916	p.A1306T	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337	tier1	-	-	110	0	0.00	82	19	18.81
LRRK2	0	genome.wustl.edu	37	12	40699585	40699585	+	Splice_Site	SNP	A	A	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	12	40699585	40699585	A	C	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	splice_site	c.3778-2	e28-2	1.000	-	-	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	75	0	0.00	38	32	45.71
MAGI2	0	genome.wustl.edu	37	7	77885755	77885755	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	77885755	77885755	C	A	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.1552	p.D518Y	1.000	superfamily_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391				30	0	0.00	33	5	13.16
MAMDC4	0	genome.wustl.edu	37	9	139751427	139751427	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	9	139751427	139751427	C	-	DEL	MAMDC4	ENST00000445819	human	ensembl	74_37	+1	known	frame_shift_del	c.2143	p.Q716fs	0.015	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	MAMDC4	HGNC	ENSG00000177943	tier1			35	0	0.00	36	2	5.26
MAP1A	0	genome.wustl.edu	37	15	43816012	43816013	+	In_Frame_Ins	INS	-	-	GTA			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	15	43816012	43816013	-	GTA	INS	MAP1A	ENST00000399453	human	ensembl	74_37	+1	known	in_frame_ins	c.2341_2342	p.A781in_frame_insGT	0.995:0.998	NULL	NULL	-	no_errors	MAP1A	HGNC	ENSG00000166963	tier1			36	0	0.00	15	5	25.00
MDGA2	0	genome.wustl.edu	37	14	47389232	47389232	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	14	47389232	47389232	G	A	SNP	MDGA2	ENST00000439988	human	ensembl	74_37	-1	known	missense	c.2221	p.R741W	1.000	superfamily_Fibronectin_type3	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA2	Uniprot_gn	ENSG00000272781	tier1	-	-	46	0	0.00	34	8	19.05
MED13L	0	genome.wustl.edu	37	12	116457089	116457089	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	12	116457089	116457089	C	A	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	missense	c.949	p.D317Y	1.000	pfam_Mediator_Med13_N_met/fun	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066	tier1	-	-	43	0	0.00	21	18	46.15
MIPEP	0	genome.wustl.edu	37	13	24411894	24411894	+	Missense_Mutation	SNP	T	T	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	13	24411894	24411894	T	C	SNP	MIPEP	ENST00000382172	human	ensembl	74_37	-1	known	missense	c.1340	p.D447G	1.000	pfam_Pept_M3A_M3B	pfam_Pept_M3A_M3B	-	no_errors	MIPEP	HGNC	ENSG00000027001	tier1	-	-	87	0	0.00	80	24	23.08
MKI67	0	genome.wustl.edu	37	10	129913474	129913474	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	10	129913474	129913474	G	A	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	nonsense	c.1198	p.R400*	0.001	NULL	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	tier1	rs142132992	-	155	0	0.00	118	34	22.37
MRC2	0	genome.wustl.edu	37	17	60755974	60755974	+	Missense_Mutation	SNP	A	A	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	60755974	60755974	A	G	SNP	MRC2	ENST00000303375	human	ensembl	74_37	+1	known	missense	c.2162	p.H721R	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC2	HGNC	ENSG00000011028	tier1	-	-	35	0	0.00	23	8	25.81
MRGBP	0	genome.wustl.edu	37	20	61430981	61430981	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	20	61430981	61430981	C	T	SNP	MRGBP	ENST00000370487	human	ensembl	74_37	+1	known	missense	c.601	p.R201W	1.000	NULL	pfam_Eaf7/MRGBP	-	no_errors	MRGBP	HGNC	ENSG00000101189	tier1	-	-	66	0	0.00	50	10	16.67
MROH2B	0	genome.wustl.edu	37	5	41058242	41058242	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	5	41058242	41058242	G	A	SNP	MROH2B	ENST00000399564	human	ensembl	74_37	-1	known	missense	c.679	p.R227C	0.171	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH2B	HGNC	ENSG00000171495	tier1	-	-	19	0	0.00	49	16	24.62
MRPL44	0	genome.wustl.edu	37	2	224828559	224828559	+	Frame_Shift_Del	DEL	G	G	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	224828559	224828559	G	-	DEL	MRPL44	ENST00000258383	human	ensembl	74_37	+1	known	frame_shift_del	c.735	p.K246fs	1.000	pfscan_dsRNA-bd_dom	superfamily_RNase_III_dom,pfscan_dsRNA-bd_dom	-	no_errors	MRPL44	HGNC	ENSG00000135900	tier1			73	0	0.00	91	21	18.75
MS4A13	0	genome.wustl.edu	37	11	60292797	60292797	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	60292797	60292797	G	T	SNP	MS4A13	ENST00000378186	human	ensembl	74_37	+1	known	missense	c.304	p.A102S	1.000	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A13	HGNC	ENSG00000204979	tier1	-	-	77	0	0.00	44	28	38.89
MUC16	0	genome.wustl.edu	37	19	9083304	9083304	+	Silent	SNP	C	C	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	9083304	9083304	C	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.8511	p.L2837	0.003	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	26	0	0.00	7	13	65.00
MUC17	0	genome.wustl.edu	37	7	100686436	100686436	+	Silent	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	100686436	100686436	C	T	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.11739	p.A3913	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	114	0	0.00	115	18	13.53
NAA11	0	genome.wustl.edu	37	4	80246785	80246785	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	4	80246785	80246785	G	A	SNP	NAA11	ENST00000286794	human	ensembl	74_37	-1	known	missense	c.247	p.R83C	1.000	pfam_GNAT_dom,pfam_FR47,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,pfam_FR47,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAA11	HGNC	ENSG00000156269	tier1	-	-	65	0	0.00	51	15	22.73
NACA2	0	genome.wustl.edu	37	17	59667899	59667899	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	59667899	59667899	C	T	SNP	NACA2	ENST00000521764	human	ensembl	74_37	-1	known	missense	c.643	p.V215M	0.097	pirsf_EGD2/NACA	pfam_Nas_poly-pep-assoc_cplx_dom,superfamily_UBA-like,pirsf_EGD2/NACA,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	NACA2	HGNC	ENSG00000253506	tier1	-	-	138	0	0.00	182	15	7.61
NACA2	0	genome.wustl.edu	37	17	59667948	59667948	+	Silent	SNP	A	A	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	59667948	59667948	A	G	SNP	NACA2	ENST00000521764	human	ensembl	74_37	-1	known	silent	c.594	p.A198	0.999	superfamily_UBA-like,pirsf_EGD2/NACA	pfam_Nas_poly-pep-assoc_cplx_dom,superfamily_UBA-like,pirsf_EGD2/NACA,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	NACA2	HGNC	ENSG00000253506	tier1	-	-	184	0	0.00	175	15	7.89
NBPF1	0	genome.wustl.edu	37	1	16905823	16905823	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	16905823	16905823	C	T	SNP	NBPF1	ENST00000432949	human	ensembl	74_37	-1	known	missense	c.40	p.E14K	0.019	NULL	pfam_NBPF_dom	-	no_errors	NBPF1	HGNC	ENSG00000219481	tier1	-	-	43	0	0.00	30	3	9.09
NKPD1	0	genome.wustl.edu	37	19	45656074	45656074	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	45656074	45656074	G	A	SNP	NKPD1	ENST00000317951	human	ensembl	74_37	-1	known	silent	c.1621	p.L541	1.000	pfam_KAP_NTPase	pfam_KAP_NTPase	-	no_errors	NKPD1	HGNC	ENSG00000179846	tier1	-	-	8	0	0.00	15	7	31.82
NMRK1	0	genome.wustl.edu	37	9	77683990	77683990	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	9	77683990	77683990	G	A	SNP	NMRK1	ENST00000361092	human	ensembl	74_37	-1	known	missense	c.418	p.P140S	0.998	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,prints_Uridine_kinase	-	no_errors	NMRK1	HGNC	ENSG00000106733	tier1	-	-	66	0	0.00	55	25	31.25
NUP214	0	genome.wustl.edu	37	9	134021655	134021655	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	9	134021655	134021655	G	A	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.1909	p.V637M	0.000	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883	tier1	-	-	206	0	0.00	150	102	40.32
OR2F2	0	genome.wustl.edu	37	7	143632834	143632834	+	Missense_Mutation	SNP	C	C	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	143632834	143632834	C	G	SNP	OR2F2	ENST00000408955	human	ensembl	74_37	+1	known	missense	c.509	p.T170S	0.004	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2F2	HGNC	ENSG00000221910				71	0	0.00	29	10	25.64
OR2F2	0	genome.wustl.edu	37	7	143632835	143632835	+	Silent	SNP	T	T	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	143632835	143632835	T	A	SNP	OR2F2	ENST00000408955	human	ensembl	74_37	+1	known	silent	c.510	p.T170	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2F2	HGNC	ENSG00000221910				72	0	0.00	29	10	25.64
OR4C16	0	genome.wustl.edu	37	11	55340006	55340006	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	55340006	55340006	A	C	SNP	OR4C16	ENST00000314634	human	ensembl	74_37	+1	known	missense	c.403	p.S135R	0.130	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C16	HGNC	ENSG00000181935	tier1	-	-	160	0	0.00	125	29	18.83
OR51B6	0	genome.wustl.edu	37	11	5373582	5373582	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	5373582	5373582	C	T	SNP	OR51B6	ENST00000380219	human	ensembl	74_37	+1	known	missense	c.845	p.P282L	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR51B6	HGNC	ENSG00000176239	tier1	-	-	99	0	0.00	87	16	15.53
ORC5	0	genome.wustl.edu	37	7	103848369	103848369	+	RNA	SNP	G	G	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	103848369	103848369	G	C	SNP	ORC5	ENST00000485726	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ORC5	HGNC	ENSG00000164815	tier1	-	-	29	0	0.00	6	59	9.92
OSBPL5	0	genome.wustl.edu	37	11	3111809	3111809	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	3111809	3111809	G	T	SNP	OSBPL5	ENST00000263650	human	ensembl	74_37	-1	known	missense	c.2377	p.Q793K	0.695	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL5	HGNC	ENSG00000021762	tier1	-	-	64	0	0.00	39	10	20.41
OVCH2	0	genome.wustl.edu	37	11	7725334	7725334	+	Silent	SNP	T	T	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	7725334	7725334	T	C	SNP	OVCH2	ENST00000454689	human	ensembl	74_37	-1	known	silent	c.201	p.V67	0.998	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_CUB_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,smart_Peptidase_S1,smart_CUB_dom,pfscan_CUB_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	OVCH2	HGNC	ENSG00000183378	tier1	-	-	15	0	0.00	15	4	21.05
PAK1IP1	0	genome.wustl.edu	37	6	10697691	10697691	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	6	10697691	10697691	T	G	SNP	PAK1IP1	ENST00000379568	human	ensembl	74_37	+1	known	missense	c.219	p.I73M	0.228	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PAK1IP1	HGNC	ENSG00000111845	tier1	-	-	70	0	0.00	63	18	21.95
PCDHA3	0	genome.wustl.edu	37	5	140181070	140181070	+	Silent	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	5	140181070	140181070	C	T	SNP	PCDHA3	ENST00000522353	human	ensembl	74_37	+1	known	silent	c.288	p.C96	0.979	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA3	HGNC	ENSG00000255408	tier1	-	-	227	0	0.00	222	49	18.01
PCLO	0	genome.wustl.edu	37	7	82585440	82585440	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	82585440	82585440	C	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.4829	p.R1610L	0.878	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	196	0	0.00	212	69	24.56
PDE9A	0	genome.wustl.edu	37	21	44188344	44188344	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	21	44188344	44188344	G	A	SNP	PDE9A	ENST00000291539	human	ensembl	74_37	+1	known	missense	c.1403	p.R468H	0.994	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE9A	HGNC	ENSG00000160191	tier1	-	-	41	0	0.00	32	20	38.46
PPP1R12C	0	genome.wustl.edu	37	19	55623852	55623852	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	55623852	55623852	G	A	SNP	PPP1R12C	ENST00000263433	human	ensembl	74_37	-1	known	missense	c.554	p.A185V	0.015	pirsf_Pase-1_reg_su_12A/B/C_euk,superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pirsf_Pase-1_reg_su_12A/B/C_euk,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R12C	HGNC	ENSG00000125503	tier1	-	-	36	0	0.00	21	10	30.30
PRICKLE3	0	genome.wustl.edu	37	X	49033350	49033350	+	Frame_Shift_Del	DEL	G	G	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	X	49033350	49033350	G	-	DEL	PRICKLE3	ENST00000376317	human	ensembl	74_37	-1	known	frame_shift_del	c.1157	p.P386fs	0.027	NULL	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE3	HGNC	ENSG00000012211	tier1			25	0	0.00	15	9	37.50
PRKACG	0	genome.wustl.edu	37	9	71628963	71628963	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	9	71628963	71628963	C	T	SNP	PRKACG	ENST00000377276	human	ensembl	74_37	-1	known	missense	c.46	p.V16M	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059	tier1	-	-	48	0	0.00	50	11	18.03
PRKCI	0	genome.wustl.edu	37	3	170011281	170011281	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	3	170011281	170011281	G	T	SNP	PRKCI	ENST00000295797	human	ensembl	74_37	+1	known	missense	c.1402	p.D468Y	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_PKC_zeta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCI	HGNC	ENSG00000163558	tier1	-	-	97	0	0.00	73	12	14.12
PZP	0	genome.wustl.edu	37	12	9345298	9345298	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	12	9345298	9345298	G	T	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	nonsense	c.1292	p.S431*	0.000	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838	tier1	-	-	84	0	0.00	33	31	48.44
RHOXF2	0	genome.wustl.edu	37	X	119293306	119293306	+	Silent	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	X	119293306	119293306	C	T	SNP	RHOXF2	ENST00000371388	human	ensembl	74_37	+1	known	silent	c.465	p.R155	0.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	RHOXF2	HGNC	ENSG00000131721	tier1	-	-	20	0	0.00	18	11	37.93
RP1L1	0	genome.wustl.edu	37	8	10470341	10470341	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	8	10470341	10470341	G	A	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.1267	p.R423W	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	63	0	0.00	61	534	89.75
SDK1	0	genome.wustl.edu	37	7	3658797	3658797	+	Silent	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	3658797	3658797	C	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	silent	c.384	p.A128	0.002	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555	tier1	-	-	27	0	0.00	22	12	35.29
SLC12A9	0	genome.wustl.edu	37	7	100457596	100457596	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	100457596	100457596	C	T	SNP	SLC12A9	ENST00000354161	human	ensembl	74_37	+1	known	missense	c.1067	p.S356L	0.999	pfam_AA-permease/SLC12A_dom	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC12A9	HGNC	ENSG00000146828	tier1	-	-	83	0	0.00	42	59	58.42
SLC39A8	0	genome.wustl.edu	37	4	103184242	103184242	+	Missense_Mutation	SNP	G	G	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	4	103184242	103184242	G	C	SNP	SLC39A8	ENST00000356736	human	ensembl	74_37	-1	known	missense	c.1342	p.L448V	0.999	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A8	HGNC	ENSG00000138821	tier1	-	-	94	0	0.00	68	12	14.81
SMG5	0	genome.wustl.edu	37	1	156220712	156220712	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	156220712	156220712	G	A	SNP	SMG5	ENST00000361813	human	ensembl	74_37	-1	known	silent	c.2904	p.G968	1.000	smart_PIN_dom	pfam_EST1,smart_PIN_dom	-	no_errors	SMG5	HGNC	ENSG00000198952	tier1	-	-	41	0	0.00	47	20	29.41
SNHG14	0	genome.wustl.edu	37	15	25326248	25326248	+	RNA	SNP	T	T	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	15	25326248	25326248	T	C	SNP	SNHG14	ENST00000383025	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	15	0	0.00	3	5	62.50
SYF2	0	genome.wustl.edu	37	1	25558879	25558879	+	RNA	SNP	C	C	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	25558879	25558879	C	A	SNP	SYF2	ENST00000474160	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SYF2	HGNC	ENSG00000117614	tier1	-	-	24	0	0.00	17	20	54.05
SYT9	0	genome.wustl.edu	37	11	7324553	7324553	+	Silent	SNP	G	G	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	7324553	7324553	G	C	SNP	SYT9	ENST00000318881	human	ensembl	74_37	+1	known	silent	c.429	p.G143	0.008	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT9	HGNC	ENSG00000170743	tier1	-	-	24	0	0.00	28	8	22.22
TDRP	0	genome.wustl.edu	37	8	442692	442692	+	Missense_Mutation	SNP	A	A	C			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	8	442692	442692	A	C	SNP	TDRP	ENST00000427263	human	ensembl	74_37	-1	known	missense	c.265	p.W89G	1.000	NULL	NULL	-	no_errors	TDRP	HGNC	ENSG00000180190	tier1	-	-	143	0	0.00	75	43	36.44
TM9SF3	0	genome.wustl.edu	37	10	98292920	98292921	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	10	98292920	98292921	-	A	INS	TM9SF3	ENST00000371142	human	ensembl	74_37	-1	known	frame_shift_ins	c.1213_1212	p.V404fs	1.000:1.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF3	HGNC	ENSG00000077147	tier1			50	0	0.00	35	12	25.53
TNRC18	0	genome.wustl.edu	37	7	5410472	5410472	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	5410472	5410472	G	A	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	silent	c.3753	p.P1251	0.000	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095				26	0	0.00	20	2	9.09
TP53	0	genome.wustl.edu	37	17	7577094	7577094	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	7577094	7577094	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.844	p.R282W	0.997	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934574	-	23	0	0.00	13	11	45.83
TRPC6	0	genome.wustl.edu	37	11	101342970	101342970	+	Missense_Mutation	SNP	T	T	G			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	11	101342970	101342970	T	G	SNP	TRPC6	ENST00000344327	human	ensembl	74_37	-1	known	missense	c.2103	p.E701D	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC6_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC6	HGNC	ENSG00000137672	tier1	-	-	169	0	0.00	148	36	19.46
TTN	0	genome.wustl.edu	37	2	179574385	179574385	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	179574385	179574385	C	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.24929	p.R8310M	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	108	0	0.00	76	42	35.59
USH2A	0	genome.wustl.edu	37	1	215901379	215901379	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	1	215901379	215901379	G	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.12059	p.T4020K	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	120	0	0.00	72	54	42.86
VCX2	0	genome.wustl.edu	37	X	8138169	8138169	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	X	8138169	8138169	G	A	SNP	VCX2	ENST00000317103	human	ensembl	74_37	-1	known	silent	c.324	p.S108	0.004	NULL	NULL	-	no_errors	VCX2	HGNC	ENSG00000177504	tier1	rs200914527	-	39	0	0.00	33	47	58.75
VRK2	0	genome.wustl.edu	37	2	58366853	58366853	+	Missense_Mutation	SNP	G	G	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	2	58366853	58366853	G	T	SNP	VRK2	ENST00000340157	human	ensembl	74_37	+1	known	missense	c.909	p.K303N	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	VRK2	HGNC	ENSG00000028116	tier1	-	-	75	0	0.00	109	12	9.92
WRAP53	0	genome.wustl.edu	37	17	7605044	7605047	+	Frame_Shift_Del	DEL	CGGA	CGGA	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	CGGA	CGGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	17	7605044	7605047	CGGA	-	DEL	WRAP53	ENST00000316024	human	ensembl	74_37	+1	known	frame_shift_del	c.892_895	p.R298fs	1.000:1.000:1.000:1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WRAP53	HGNC	ENSG00000141499	tier1			64	0	0.00	43	10	18.87
ZMYND19	0	genome.wustl.edu	37	9	140482050	140482050	+	RNA	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	9	140482050	140482050	G	A	SNP	ZMYND19	ENST00000471957	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZMYND19	HGNC	ENSG00000165724	tier1	-	-	28	0	0.00	20	9	31.03
ZNF397	0	genome.wustl.edu	37	18	32822843	32822843	+	Missense_Mutation	SNP	C	C	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	18	32822843	32822843	C	A	SNP	ZNF397	ENST00000330501	human	ensembl	74_37	+1	known	missense	c.409	p.Q137K	0.331	pfam_Tscrpt_reg_SCAN,smart_Tscrpt_reg_SCAN	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF397	HGNC	ENSG00000186812	tier1	-	-	62	0	0.00	25	11	30.56
ZNF416	0	genome.wustl.edu	37	19	58084398	58084400	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	58084398	58084400	GGA	0	DEL	ZNF416	ENST00000196489	human	ensembl	74_37	-1	known	in_frame_del	c.874_872	p.IH291in_frame_delN	0.974:0.031:0.030	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF416	HGNC	ENSG00000083817				71	0	0.00	105	17	13.93
ZNF416	0	genome.wustl.edu	37	19	58084406	58084406	+	Missense_Mutation	SNP	C	C	T			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	58084406	58084406	C	T	SNP	ZNF416	ENST00000196489	human	ensembl	74_37	-1	known	missense	c.866	p.R289Q	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF416	HGNC	ENSG00000083817				74	0	0.00	110	21	16.03
ZNF518A	0	genome.wustl.edu	37	10	97918855	97918856	+	RNA	INS	-	-	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	10	97918855	97918856	-	A	INS	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997:0.867	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853	tier1			55	0	0.00	38	4	9.52
ZNF570	0	genome.wustl.edu	37	19	37975121	37975122	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	37975121	37975122	-	A	INS	ZNF570	ENST00000330173	human	ensembl	74_37	+1	known	frame_shift_ins	c.597_598	p.N201fs	0.003:0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF570	HGNC	ENSG00000171827	tier1			189	0	0.00	130	64	32.99
ZNF671	0	genome.wustl.edu	37	19	58232422	58232422	+	Silent	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	19	58232422	58232422	G	A	SNP	ZNF671	ENST00000317398	human	ensembl	74_37	-1	known	silent	c.1032	p.S344	0.004	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF671	HGNC	ENSG00000083814	tier1	-	-	86	0	0.00	142	34	19.32
ZNF862	0	genome.wustl.edu	37	7	149545076	149545076	+	Missense_Mutation	SNP	G	G	A			TCGA-VQ-AA6I-01A-11D-A410-08	TCGA-VQ-AA6I-10A-01D-A413-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2ffdc928-21ba-466c-b9a4-700f2015fb0d	7f65b783-4130-4b39-9a9c-aaf5a166e2f6	7	149545076	149545076	G	A	SNP	ZNF862	ENST00000223210	human	ensembl	74_37	+1	known	missense	c.494	p.R165Q	0.997	smart_Znf_TTF	pfam_Krueppel-associated_box,pfam_HATC_dom_C,superfamily_Krueppel-associated_box,superfamily_RNaseH-like_dom,smart_Krueppel-associated_box,smart_Znf_TTF,pfscan_Krueppel-associated_box	-	no_errors	ZNF862	HGNC	ENSG00000106479	tier1	-	-	21	0	0.00	17	6	26.09
