Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AGBL5	0	genome.wustl.edu	37	2	27282091	27282091	+	Missense_Mutation	SNP	G	G	C			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	2	27282091	27282091	G	C	SNP	AGBL5	ENST00000360131	human	ensembl	74_37	+1	known	missense	c.1908	p.L636F	1.000	NULL	pfam_Peptidase_M14	-	no_errors	AGBL5	HGNC	ENSG00000084693	tier1	-	-	250	0	0.00	260	26	9.09
ALOX15	0	genome.wustl.edu	37	17	4542894	4542894	+	Silent	SNP	A	A	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	17	4542894	4542894	A	G	SNP	ALOX15	ENST00000545513	human	ensembl	74_37	-1	known	silent	c.234	p.Y78	0.465	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C	-	no_errors	ALOX15	HGNC	ENSG00000161905				31	0	0.00	31	6	16.22
ANKRD35	0	genome.wustl.edu	37	1	145562089	145562089	+	Missense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	145562089	145562089	G	A	SNP	ANKRD35	ENST00000355594	human	ensembl	74_37	+1	known	missense	c.1777	p.G593R	0.797	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD35	HGNC	ENSG00000198483	tier1	-	-	89	0	0.00	82	16	16.33
ARMCX2	0	genome.wustl.edu	37	X	100911184	100911184	+	Missense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	X	100911184	100911184	C	T	SNP	ARMCX2	ENST00000328766	human	ensembl	74_37	-1	known	missense	c.1391	p.R464Q	1.000	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ARMCX2	HGNC	ENSG00000184867	tier1	-	-	135	0	0.00	69	89	56.33
CDC42BPA	0	genome.wustl.edu	37	1	227182042	227182042	+	Frame_Shift_Del	DEL	G	G	-			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	227182042	227182042	G	-	DEL	CDC42BPA	ENST00000334218	human	ensembl	74_37	-1	known	frame_shift_del	c.5273	p.P1758fs	1.000	NULL	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Pkinase_C,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,superfamily_WD40_repeat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPA	HGNC	ENSG00000143776	tier1			28	0	0.00	25	2	7.41
CNTNAP4	0	genome.wustl.edu	37	16	76389352	76389352	+	Missense_Mutation	SNP	A	A	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	16	76389352	76389352	A	G	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	missense	c.331	p.M111V	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	tier1	-	-	140	0	0.00	99	27	21.26
DNAH9	0	genome.wustl.edu	37	17	11837345	11837345	+	Missense_Mutation	SNP	G	G	C			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	17	11837345	11837345	G	C	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.12446	p.G4149A	0.987	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	103	0	0.00	65	14	17.72
DSCAML1	0	genome.wustl.edu	37	11	117306455	117306455	+	Missense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	11	117306455	117306455	G	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.4961	p.T1654I	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103	tier1	-	-	84	0	0.00	71	11	13.41
DYRK2	0	genome.wustl.edu	37	12	68050889	68050889	+	Missense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	12	68050889	68050889	G	A	SNP	DYRK2	ENST00000344096	human	ensembl	74_37	+1	known	missense	c.202	p.G68S	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK2	HGNC	ENSG00000127334	tier1	-	-	65	0	0.00	71	12	14.29
ERI1	0	genome.wustl.edu	37	8	8877957	8877957	+	Missense_Mutation	SNP	T	T	C			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	8	8877957	8877957	T	C	SNP	ERI1	ENST00000250263	human	ensembl	74_37	+1	known	missense	c.790	p.Y264H	1.000	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,pfam_SAP_dom,superfamily_RNaseH-like_dom,smart_SAP_dom,smart_Exonuclease,pfscan_SAP_dom	-	no_errors	ERI1	HGNC	ENSG00000104626	tier1	-	-	52	0	0.00	61	7	10.29
F13B	0	genome.wustl.edu	37	1	197031090	197031090	+	Missense_Mutation	SNP	G	G	C			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	197031090	197031090	G	C	SNP	F13B	ENST00000367412	human	ensembl	74_37	-1	known	missense	c.275	p.T92S	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	F13B	HGNC	ENSG00000143278	tier1	-	-	56	0	0.00	42	7	14.29
FAM134A	0	genome.wustl.edu	37	2	220045419	220045419	+	Missense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	2	220045419	220045419	G	A	SNP	FAM134A	ENST00000430297	human	ensembl	74_37	+1	known	missense	c.583	p.A195T	0.984	pfam_Reticulon	pfam_Reticulon	-	no_errors	FAM134A	HGNC	ENSG00000144567	tier1	-	-	301	0	0.00	237	51	17.65
FLII	0	genome.wustl.edu	37	17	18155351	18155351	+	Missense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	17	18155351	18155351	G	A	SNP	FLII	ENST00000327031	human	ensembl	74_37	-1	known	missense	c.1208	p.A403V	1.000	NULL	pfam_Gelsolin_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	FLII	HGNC	ENSG00000177731	tier1	-	-	132	0	0.00	84	21	20.00
GAB4	0	genome.wustl.edu	37	22	17473053	17473053	+	Missense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	22	17473053	17473053	C	T	SNP	GAB4	ENST00000400588	human	ensembl	74_37	-1	known	missense	c.188	p.R63H	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB4	HGNC	ENSG00000215568	tier1	-	-	175	0	0.00	139	40	22.35
GFPT2	0	genome.wustl.edu	37	5	179765564	179765564	+	Missense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	5	179765564	179765564	G	A	SNP	GFPT2	ENST00000253778	human	ensembl	74_37	-1	known	missense	c.44	p.T15M	0.997	pfam_GATase_dom	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT2	HGNC	ENSG00000131459	tier1	-	-	45	0	0.00	30	9	23.08
GRIN2A	0	genome.wustl.edu	37	16	10032264	10032264	+	Missense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	16	10032264	10032264	C	T	SNP	GRIN2A	ENST00000330684	human	ensembl	74_37	-1	known	missense	c.559	p.V187I	0.999	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454	tier1	-	-	108	0	0.00	73	14	15.91
HERC5	0	genome.wustl.edu	37	4	89410411	89410411	+	Missense_Mutation	SNP	G	G	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	4	89410411	89410411	G	T	SNP	HERC5	ENST00000264350	human	ensembl	74_37	+1	known	missense	c.2057	p.R686I	1.000	superfamily_HECT	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_RCC1/BLIP-II,superfamily_Haem_Oase-like_multi-hlx,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC5	HGNC	ENSG00000138646	tier1	-	-	124	0	0.00	143	20	12.27
HGF	0	genome.wustl.edu	37	7	81374361	81374361	+	Missense_Mutation	SNP	C	C	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	7	81374361	81374361	C	G	SNP	HGF	ENST00000222390	human	ensembl	74_37	-1	known	missense	c.701	p.R234P	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGF	HGNC	ENSG00000019991	tier1	-	-	78	0	0.00	82	10	10.87
INTS7	0	genome.wustl.edu	37	1	212190316	212190316	+	Missense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	212190316	212190316	G	A	SNP	INTS7	ENST00000440600	human	ensembl	74_37	-1	known	missense	c.274	p.H92Y	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	INTS7	HGNC	ENSG00000143493	tier1	-	-	136	0	0.00	118	24	16.90
ITGAV	0	genome.wustl.edu	37	2	187521024	187521024	+	Nonsense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	2	187521024	187521024	C	T	SNP	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	nonsense	c.1615	p.R539*	0.999	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448	tier1	-	-	172	0	0.00	88	38	29.92
KIR2DL2	0	genome.wustl.edu	37	GL000209.1	88388	88388	+	Missense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	GL000209.1	88388	88388	C	T	SNP	KIR2DL2	ENST00000391731	human	ensembl	74_37	+1	known	missense	c.148	p.R50C	NULL	pfam_Immunoglobulin,smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL2	HGNC	ENSG00000215764	tier1	-	-	71	0	0.00	51	17	24.64
LLGL2	0	genome.wustl.edu	37	17	73569677	73569677	+	Silent	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	17	73569677	73569677	C	T	SNP	LLGL2	ENST00000392550	human	ensembl	74_37	+1	known	silent	c.2841	p.N947	0.000	NULL	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL2	HGNC	ENSG00000073350	tier1	-	-	65	0	0.00	53	12	18.18
LRRC37A4P	0	genome.wustl.edu	37	17	43591861	43591861	+	RNA	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	17	43591861	43591861	G	A	SNP	LRRC37A4P	ENST00000579913	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	LRRC37A4P	HGNC	ENSG00000214425	tier1	rs199946580	-	21	0	0.00	18	4	18.18
MATN1	0	genome.wustl.edu	37	1	31189635	31189635	+	Splice_Site	SNP	A	A	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	31189635	31189635	A	G	SNP	MATN1	ENST00000373765	human	ensembl	74_37	-1	known	splice_site	c.790+2	e4+2	1.000	-	-	-	no_errors	MATN1	HGNC	ENSG00000162510	tier1	-	-	41	0	0.00	26	6	18.75
MED15	0	genome.wustl.edu	37	22	20922844	20922844	+	Nonsense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	22	20922844	20922844	C	T	SNP	MED15	ENST00000263205	human	ensembl	74_37	+1	known	nonsense	c.1078	p.Q360*	0.991	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917	tier1	-	-	39	0	0.00	28	7	20.00
MEX3B	0	genome.wustl.edu	37	15	82336140	82336140	+	Frame_Shift_Del	DEL	G	G	-			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	15	82336140	82336140	G	-	DEL	MEX3B	ENST00000329713	human	ensembl	74_37	-1	known	frame_shift_del	c.1071	p.E358fs	0.008	NULL	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3B	HGNC	ENSG00000183496	tier1			67	0	0.00	54	12	18.18
MLLT11	0	genome.wustl.edu	37	1	151039754	151039754	+	Silent	SNP	C	C	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	151039754	151039754	C	A	SNP	MLLT11	ENST00000368921	human	ensembl	74_37	+1	known	silent	c.54	p.P18	0.998	NULL	NULL	-	no_errors	MLLT11	HGNC	ENSG00000213190	tier1	-	-	130	0	0.00	95	22	18.80
MXRA8	0	genome.wustl.edu	37	1	1290110	1290110	+	Frame_Shift_Del	DEL	G	G	-			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	1290110	1290110	G	-	DEL	MXRA8	ENST00000445648	human	ensembl	74_37	-1	known	frame_shift_del	c.901	p.R301fs	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	MXRA8	HGNC	ENSG00000162576	tier1			33	0	0.00	21	2	8.70
NCAPG2	0	genome.wustl.edu	37	7	158448978	158448978	+	Missense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	7	158448978	158448978	G	A	SNP	NCAPG2	ENST00000409339	human	ensembl	74_37	-1	known	missense	c.2362	p.L788F	0.996	pfam_Condensin2_G2	pfam_Condensin2_G2,superfamily_ARM-type_fold	-	no_errors	NCAPG2	HGNC	ENSG00000146918	tier1	-	-	100	0	0.00	99	16	13.91
NKAPL	0	genome.wustl.edu	37	6	28227901	28227901	+	Nonsense_Mutation	SNP	C	C	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	6	28227901	28227901	C	G	SNP	NKAPL	ENST00000343684	human	ensembl	74_37	+1	known	nonsense	c.752	p.S251*	1.000	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134	tier1	-	-	37	0	0.00	24	5	17.24
OR52K1	0	genome.wustl.edu	37	11	4511001	4511001	+	Missense_Mutation	SNP	C	C	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	11	4511001	4511001	C	G	SNP	OR52K1	ENST00000307632	human	ensembl	74_37	+1	known	missense	c.871	p.P291A	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52K1	HGNC	ENSG00000196778	tier1	-	-	189	0	0.00	149	34	18.58
OR8A1	0	genome.wustl.edu	37	11	124440326	124440326	+	Missense_Mutation	SNP	T	T	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	11	124440326	124440326	T	G	SNP	OR8A1	ENST00000284287	human	ensembl	74_37	+1	known	missense	c.362	p.F121C	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8A1	HGNC	ENSG00000196119	tier1	-	-	78	0	0.00	52	18	25.71
PCDHB14	0	genome.wustl.edu	37	5	140603486	140603486	+	Nonsense_Mutation	SNP	G	G	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	5	140603486	140603486	G	T	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	nonsense	c.409	p.E137*	0.460	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327	tier1	-	-	106	0	0.00	108	17	13.60
PMS2P3	0	genome.wustl.edu	37	7	75145475	75145475	+	RNA	SNP	C	C	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	7	75145475	75145475	C	G	SNP	PMS2P3	ENST00000394921	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.713	-	-	-	no_errors	PMS2P3	HGNC	ENSG00000127957	tier1	-	-	78	0	0.00	67	11	14.10
PTGER3	0	genome.wustl.edu	37	1	71512621	71512621	+	Nonsense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	71512621	71512621	G	A	SNP	PTGER3	ENST00000354608	human	ensembl	74_37	-1	known	nonsense	c.640	p.R214*	0.004	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_EP3_rcpt_2	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srbc,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP3_rcpt,prints_Prostanoid_rcpt,prints_EP3_rcpt_2,prints_Prostglndn_DP_rcpt,prints_GPCR_Rhodpsn,prints_Thbox_rcpt	-	no_errors	PTGER3	HGNC	ENSG00000050628	tier1	-	-	116	0	0.00	108	14	11.29
QKI	0	genome.wustl.edu	37	6	163876423	163876423	+	Missense_Mutation	SNP	A	A	C			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	6	163876423	163876423	A	C	SNP	QKI	ENST00000361752	human	ensembl	74_37	+1	known	missense	c.255	p.K85N	1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531	tier1	-	-	145	0	0.00	127	28	18.06
RABGAP1	0	genome.wustl.edu	37	9	125748609	125748609	+	Silent	SNP	C	C	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	9	125748609	125748609	C	G	SNP	RABGAP1	ENST00000373647	human	ensembl	74_37	+1	known	silent	c.501	p.A167	0.999	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454	tier1	-	-	182	0	0.00	126	23	15.44
RHOA	0	genome.wustl.edu	37	3	49405969	49405969	+	Missense_Mutation	SNP	A	A	C			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	3	49405969	49405969	A	C	SNP	RHOA	ENST00000418115	human	ensembl	74_37	-1	known	missense	c.169	p.L57V	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOA	HGNC	ENSG00000067560	tier1	-	-	64	0	0.00	80	17	17.53
RNA5-8SP2	0	genome.wustl.edu	37	16	33965563	33965563	+	RNA	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	16	33965563	33965563	C	T	SNP	RNA5-8SP2	ENST00000363564	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP2	HGNC	ENSG00000200434	tier1	-	-	64	0	0.00	51	6	10.53
RNF14	0	genome.wustl.edu	37	5	141358326	141358326	+	Silent	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	5	141358326	141358326	C	T	SNP	RNF14	ENST00000347642	human	ensembl	74_37	+1	known	silent	c.765	p.I255	1.000	pfscan_Znf_RING	pfam_RWD-domain,pfam_Znf_C6HC,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,smart_Znf_C6HC,pfscan_RWD-domain,pfscan_Znf_RING	-	no_errors	RNF14	HGNC	ENSG00000013561	tier1	-	-	198	0	0.00	188	22	10.48
RYR2	0	genome.wustl.edu	37	1	237659974	237659974	+	Frame_Shift_Del	DEL	G	G	-			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	237659974	237659974	G	-	DEL	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	frame_shift_del	c.2119	p.G708fs	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1			105	0	0.00	81	17	17.35
RYR2	0	genome.wustl.edu	37	1	237659980	237659980	+	Frame_Shift_Del	DEL	G	G	-			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	237659980	237659980	G	-	DEL	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	frame_shift_del	c.2125	p.E709fs	0.993	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1			101	0	0.00	90	18	16.67
SIPA1L3	0	genome.wustl.edu	37	19	38573722	38573722	+	Missense_Mutation	SNP	A	A	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	19	38573722	38573722	A	T	SNP	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	missense	c.1517	p.D506V	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738	tier1	-	-	76	0	0.00	51	20	28.17
SLC25A14	0	genome.wustl.edu	37	X	129492768	129492768	+	RNA	DEL	T	T	-			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	X	129492768	129492768	T	-	DEL	SLC25A14	ENST00000464184	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC25A14	HGNC	ENSG00000102078	tier1			16	0	0.00	29	4	12.12
SLC26A7	0	genome.wustl.edu	37	8	92406060	92406060	+	Silent	SNP	A	A	G			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	8	92406060	92406060	A	G	SNP	SLC26A7	ENST00000309536	human	ensembl	74_37	+1	known	silent	c.1812	p.V604	0.000	pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A7	HGNC	ENSG00000147606	tier1	-	-	134	0	0.00	125	23	15.44
SV2C	0	genome.wustl.edu	37	5	75591722	75591722	+	Frame_Shift_Del	DEL	C	C	-			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	5	75591722	75591722	C	-	DEL	SV2C	ENST00000502798	human	ensembl	74_37	+1	known	frame_shift_del	c.1457	p.T486fs	1.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2C	HGNC	ENSG00000122012	tier1			88	0	0.00	79	18	18.56
TEX37	0	genome.wustl.edu	37	2	88825182	88825182	+	Missense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	2	88825182	88825182	C	T	SNP	TEX37	ENST00000303254	human	ensembl	74_37	+1	known	missense	c.20	p.P7L	0.011	NULL	NULL	-	no_errors	TEX37	HGNC	ENSG00000172073	tier1	-	-	234	0	0.00	237	49	17.07
THEMIS	0	genome.wustl.edu	37	6	128134119	128134119	+	Missense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	6	128134119	128134119	C	T	SNP	THEMIS	ENST00000543064	human	ensembl	74_37	-1	known	missense	c.1667	p.R556H	0.874	NULL	NULL	-	no_errors	THEMIS	HGNC	ENSG00000172673	tier1	-	-	111	0	0.00	71	28	28.28
TMCC2	0	genome.wustl.edu	37	1	205238131	205238131	+	Silent	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	1	205238131	205238131	C	T	SNP	TMCC2	ENST00000358024	human	ensembl	74_37	+1	known	silent	c.801	p.T267	0.000	NULL	pfam_Predicted_TM_coiled-coil_2,superfamily_t-SNARE	-	no_errors	TMCC2	HGNC	ENSG00000133069	tier1	-	-	109	0	0.00	84	5	5.62
TMEM154	0	genome.wustl.edu	37	4	153573702	153573702	+	Missense_Mutation	SNP	C	C	T			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	4	153573702	153573702	C	T	SNP	TMEM154	ENST00000304385	human	ensembl	74_37	-1	known	missense	c.352	p.A118T	0.241	NULL	NULL	-	no_errors	TMEM154	HGNC	ENSG00000170006	tier1	-	-	176	0	0.00	143	24	14.29
TP53	0	genome.wustl.edu	37	17	7578375	7578375	+	Silent	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	17	7578375	7578375	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	silent	c.555	p.S185	0.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	87	0	0.00	64	13	16.46
UAP1L1	0	genome.wustl.edu	37	9	139972985	139972985	+	Missense_Mutation	SNP	C	C	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	9	139972985	139972985	C	A	SNP	UAP1L1	ENST00000409858	human	ensembl	74_37	+1	known	missense	c.526	p.P176T	1.000	pfam_UDPGP_trans	pfam_UDPGP_trans	-	no_errors	UAP1L1	HGNC	ENSG00000197355				90	0	0.00	80	5	5.88
VPS13C	0	genome.wustl.edu	37	15	62212323	62212323	+	Nonsense_Mutation	SNP	G	G	A			TCGA-ZA-A8F6-01A-23D-A364-08	TCGA-ZA-A8F6-10A-01D-A362-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ce7e4baa-89af-49a7-ab54-62141e36a0f5	68642cfe-c174-4703-a83b-c8f302502d2f	15	62212323	62212323	G	A	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	nonsense	c.7420	p.Q2474*	0.997	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	114	0	0.00	99	24	19.51
