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2016_01_28 Data Snapshot

Table 1.  Get Full Table

Barcode UUID Date Type Category Notes
TCGA-3M-AB46-01A-11R-A414-31 ffa0dfbd-83fa-4e47-b448-a7d922ca4e4a 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-BR-4184-11A-01D-1130-01 f3eb81ae-4fc0-40e1-ab56-51086da7bb49 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-4194-11A-01D-1130-01 7be2642e-010b-4003-a152-b8e4bcd78ed4 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-6453-11A-01D-1799-01 9046acce-0767-48c7-b094-ee0a3aea31b9 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-7704-01A-11R-2055-13 3796ed18-1911-4d81-8d69-40bba4542703 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-BR-7704-01A-11R-2055-13 3796ed18-1911-4d81-8d69-40bba4542703 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-BR-8077-10A-01D-2338-01 9d9155d0-d3d2-4c48-afbb-bed3c1430946 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8289-10A-01D-2338-01 845595dd-cf82-4598-b845-c8cb79a459b0 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8295-01A-11R-2343-13 9c2721cf-ca2e-4a60-91c1-1f45cb49bf91 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-BR-8295-01A-11R-2343-13 9c2721cf-ca2e-4a60-91c1-1f45cb49bf91 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-BR-8295-10A-01D-2338-01 dde98c27-0d5c-4d4b-aab0-f8ff439b2798 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8296-01A-11R-2343-13 0d1267c5-ad37-4942-923f-f38c2b0d3127 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-BR-8296-01A-11R-2343-13 0d1267c5-ad37-4942-923f-f38c2b0d3127 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-BR-8296-10A-01D-2338-01 7a1e551b-0a3b-4c05-8ba7-68264e2ff0f9 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8297-10A-01D-2338-01 82dddf9d-e8b5-4b2a-9b4a-e2b846047fe9 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8366-10A-01D-2339-01 266bf4bf-f43b-40d3-8ec4-2f054a254299 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8485-10A-01D-2390-01 5233d33c-af0a-432e-9545-174ff420a1a6 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8487-10A-01D-2390-01 e69f5d60-6d72-4a26-9fe0-19ca09d7a174 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8676-01A-11R-2402-13 f4b00f16-43de-4703-8d7c-4d7e9fca0920 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-BR-8676-01A-11R-2402-13 f4b00f16-43de-4703-8d7c-4d7e9fca0920 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-BR-8677-10A-01D-2390-01 f9d14691-cc84-40e3-bd2d-671e4a16e357 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8679-10A-01D-2390-01 df3ef7d8-c2d2-4904-bf41-86892e56ec09 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8687-10A-01D-2390-01 24b4da1f-bd81-431a-9a67-9c3d9d3dd92d 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-8690-01A-11R-2402-13 f8af1ec3-7b69-4fa1-a0f1-5b61ea471b2e 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-BR-8690-01A-11R-2402-13 f8af1ec3-7b69-4fa1-a0f1-5b61ea471b2e 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-BR-8690-10A-01D-2390-01 f376c284-00b1-44b3-8f21-11af11ee9b02 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-BR-A44U-01A-11R-A36D-31 5d1ed8da-88b6-4a5a-9144-76156df0e255 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-BR-A4QL-01A-31R-A251-31 b52a9ebf-2c18-41da-9518-b874d0e4432c 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-BR-A4QL-01A-31R-A251-31 b52a9ebf-2c18-41da-9518-b874d0e4432c 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-BR-A4QM-01A-12R-A251-31 762812df-03a7-4e9b-aefc-26cf355c87de 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-BR-A4QM-01A-12R-A251-31 762812df-03a7-4e9b-aefc-26cf355c87de 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-CD-5799-10A-01D-1599-01 ca044457-f735-4a04-95d1-0b1883352a0e 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-CD-5813-01A-11D-1599-01 e29cd557-ea94-4a15-b02e-f32e1c2e78cc 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-CD-8525-01A-11R-2343-13 21db6663-def9-49c6-9184-4479aad5d6f1 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-CD-8525-01A-11R-2343-13 21db6663-def9-49c6-9184-4479aad5d6f1 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-CD-8527-01A-11R-2343-13 0f16f1f6-a243-451a-a915-1db1f5ceae02 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-CD-8527-01A-11R-2343-13 0f16f1f6-a243-451a-a915-1db1f5ceae02 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-CD-8533-10A-01D-2339-01 a589164d-6b53-4dca-93d9-6e5e54a607a6 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-CD-8534-10A-01D-2339-01 645376d8-8ccd-449e-bbe2-f0fbc3512775 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-CD-A4MI-10A-01D-A255-01 300def07-9244-4a90-84d2-143a7c55d9e1 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-D7-8576-10A-01D-2339-01 36202c0f-6b0c-4f38-a5a5-bad580ea76f6 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-D7-A4Z0-10A-01D-A255-01 d2447188-c089-46eb-954c-3d8b1cc0546a 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-EQ-8122-11A-01D-2338-01 7a2bfc62-f324-40c0-9929-6556e979e2a1 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-F1-A448-10A-01D-A24E-01 361c91e2-21cf-49b4-aa05-416db1fdf83b 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-FP-A4BE-01A-12D-A24C-01 24e20c8a-d4c6-4c8a-91e7-b3b98cbab616 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-HJ-7597-01A-21R-2203-13 21403bdb-d56b-4b59-af62-fd97528b0051 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-HJ-7597-01A-21R-2203-13 21403bdb-d56b-4b59-af62-fd97528b0051 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-HU-8243-01A-11R-2343-13 ace3edd6-14a9-42cc-84f3-6127237f2913 12/11/2015 STAD Item flagged DNU QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
TCGA-HU-8243-01A-11R-2343-13 ace3edd6-14a9-42cc-84f3-6127237f2913 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-HU-8243-11A-01D-2338-01 6e5789d7-4988-457a-86eb-e618c7ab06eb 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-HU-8602-10A-01D-2390-01 f2746914-a04d-4cf3-92e9-27a646687686 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-HU-A4G3-10A-01D-A24E-01 64eb5ba7-caee-41bb-ba60-3bff0e16885d 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-HU-A4GD-01A-11R-A36D-31 beb0290c-4c9a-4092-9dc3-cbff2f549b18 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-HU-A4GD-10A-01D-A255-01 dd84bb47-9510-4fd5-94e8-3c040b94e1d1 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-HU-A4GN-10A-01D-A255-01 dbd34591-cd21-4238-b2ee-1606eb794565 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-HU-A4H3-10A-01D-A255-01 06855da0-4d3c-4ad3-aaf8-1090ddf83894 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-IN-8462-10A-01D-2339-01 f5c8f819-75a3-4b64-b056-30c7c4a34afb 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-IN-A6RJ-01A-21R-A33Y-31 2211f388-87e7-478f-a4e5-e6237b152b82 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-IN-A6RN-01A-12R-A33Y-31 f6589f0a-4b2c-4931-8915-9d71ce834bb3 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-IN-A7NR-01A-11R-A354-31 f34fb02c-fe1d-4f3d-a57c-4413dd6b524c 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-IN-A7NT-01A-21R-A354-31 48105f07-87e2-4d36-9f1e-9905d041d1be 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-IN-A7NU-01A-22R-A354-31 d52b9b70-e7ee-4474-857a-eb40c10d1746 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-KB-A93G-01A-11R-A39F-13 912d64d6-406b-431f-9141-0504ad9cba65 06/18/2015 STAD Item flagged DNU Sample identity uncertain
TCGA-KB-A93H-01A-11R-A39E-31 2b1e486f-03f8-4c35-8897-034faefbd086 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-KB-A93H-01A-11R-A39F-13 37aa99a2-c867-4409-bf14-5bc35f61cce1 06/18/2015 STAD Item flagged DNU Sample identity uncertain
TCGA-RD-A7BS-01A-11R-A32D-31 3268d287-7b2f-4a81-8399-10a77e4367d7 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-RD-A7C1-01A-11R-A32D-31 dce8a7c9-5d7d-454d-aa9a-949ae0754b34 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-RD-A8N5-10A-01D-A361-01 4c9ac512-5ad1-4795-804e-f1639a28944e 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-RD-A8NB-10A-01D-A399-01 a94f40b2-3d43-428b-b3dd-364c9a43bff0 09/28/2015 STAD Item flagged DNU The aliquot failed Broad pipeline QC and not all files are suitable for use. Consult the SDRF file to determine which files are usable.
TCGA-SW-A7EB-01A-11R-A354-31 459fb55c-3922-4adf-97fb-26ccf298bc45 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-VQ-A8DV-01A-12R-A36D-31 ad25f0c1-833a-48f5-8835-be6a288381aa 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-VQ-A8PH-01A-12R-A414-31 d841b3a0-831e-46bf-bab7-529b23f1e4f0 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.
TCGA-ZQ-A9CR-01A-11R-A39E-31 4b0753d0-c301-4fcf-a08f-33919d3a33bc 12/14/2015 STAD Item Flagged Low Quality QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are below average for this file, which should be used with caution for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable results.