Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
LOXL4	84171	broad.mit.edu	37	10	100010909	100010909	+	Missense_Mutation	SNP	C	C	T	rs141069497		TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr10:100010909C>T	ENST00000260702.3	-	14	2263	c.2113G>A	c.(2113-2115)Gtg>Atg	p.V705M		NM_032211.6	NP_115587.6	Q96JB6	LOXL4_HUMAN	lysyl oxidase-like 4	705	Lysyl-oxidase like.					extracellular space|membrane	copper ion binding|protein binding|scavenger receptor activity			breast(1)|endometrium(6)|kidney(1)|large_intestine(3)|lung(8)|ovary(4)|prostate(1)|skin(2)	26		Colorectal(252;0.234)		Epithelial(162;2.14e-11)|all cancers(201;2.49e-09)		GACTCTGCCACTTCATAGTGG	0.498000													3	51					0	0	1	0	0
SERPINH1	871	broad.mit.edu	37	11	75283017	75283017	+	Missense_Mutation	SNP	C	C	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr11:75283017C>A	ENST00000524558.1	+	5	2581	c.1146C>A	c.(1144-1146)ttC>ttA	p.F382L	SERPINH1_ENST00000525876.1_Missense_Mutation_p.F165L|SERPINH1_ENST00000533603.1_Missense_Mutation_p.F382L|SERPINH1_ENST00000358171.3_Missense_Mutation_p.F382L			P50454	SERPH_HUMAN	serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)	382					regulation of proteolysis|response to unfolded protein	endoplasmic reticulum lumen|ER-Golgi intermediate compartment	collagen binding|serine-type endopeptidase inhibitor activity			endometrium(4)|large_intestine(3)|liver(1)|lung(4)|ovary(2)|stomach(1)	15	Ovarian(111;0.11)					CCAAGCTGTTCTACGCCGACC	0.617000													26	23					1.66031e-10	1.74925e-10	1	1	0
EXOSC4	54512	broad.mit.edu	37	8	145134875	145134875	+	Silent	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr8:145134875G>A	ENST00000316052.5	+	2	304	c.201G>A	c.(199-201)ccG>ccA	p.P67P	EXOSC4_ENST00000525936.1_Silent_p.P67P	NM_019037.2	NP_061910.1	Q9NPD3	EXOS4_HUMAN	exosome component 4	67					DNA deamination|exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay|histone mRNA catabolic process|maturation of 5.8S rRNA|nuclear mRNA surveillance|positive regulation of cell growth	cytosol|exosome (RNase complex)|nucleolus|transcriptionally active chromatin	3'-5'-exoribonuclease activity|AU-rich element binding|protein binding			lung(4)|prostate(1)|upper_aerodigestive_tract(2)	7	all_cancers(97;2.87e-11)|all_epithelial(106;2.16e-09)|Lung NSC(106;5.89e-05)|all_lung(105;0.000174)|Ovarian(258;0.0173)|Acute lymphoblastic leukemia(118;0.155)		OV - Ovarian serous cystadenocarcinoma(54;6.79e-41)|Epithelial(56;1.02e-39)|all cancers(56;3.48e-35)|Colorectal(110;0.055)|BRCA - Breast invasive adenocarcinoma(115;0.105)			GAGCCCTGCCGGACAGGGCCC	0.617000													7	222					0	0	1	0	0
CADM2	253559	broad.mit.edu	37	3	85961619	85961619	+	Missense_Mutation	SNP	C	C	T	rs145952783	by1000genomes	TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr3:85961619C>T	ENST00000383699.3	+	6	1253	c.626C>T	c.(625-627)gCg>gTg	p.A209V	CADM2_ENST00000407528.2_Missense_Mutation_p.A200V|CADM2_ENST00000405615.2_Missense_Mutation_p.A202V	NM_001167675.1|NM_001256504.1|NM_001256505.1	NP_001161147.1|NP_001243433.1|NP_001243434.1	Q8N3J6	CADM2_HUMAN	cell adhesion molecule 2	200	Ig-like C2-type 1.				adherens junction organization|cell junction assembly	integral to membrane|plasma membrane				endometrium(1)|haematopoietic_and_lymphoid_tissue(2)|kidney(5)|large_intestine(9)|lung(15)|ovary(1)|prostate(1)|skin(4)	38		Lung NSC(201;0.0148)		LUSC - Lung squamous cell carcinoma(29;0.000815)|Lung(72;0.00304)|BRCA - Breast invasive adenocarcinoma(55;0.156)|Epithelial(33;0.157)		GATGGAGTGGCGGTCATCTGC	0.478000													3	48					0	0	1	0	0
GPR3	2827	broad.mit.edu	37	1	27721052	27721052	+	Silent	SNP	C	C	T	rs149402253		TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr1:27721052C>T	ENST00000374024.3	+	2	849	c.750C>T	c.(748-750)gcC>gcT	p.A250A		NM_005281.3	NP_005272.1	P46089	GPR3_HUMAN	G protein-coupled receptor 3	250					activation of adenylate cyclase activity by G-protein signaling pathway	integral to plasma membrane				endometrium(3)|lung(3)|ovary(1)|skin(1)	8		Breast(348;1.53e-05)|Ovarian(437;0.0606)|all_lung(284;0.157)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0415)|OV - Ovarian serous cystadenocarcinoma(117;2.81e-26)|Colorectal(126;1.24e-08)|KIRC - Kidney renal clear cell carcinoma(1967;3.23e-08)|COAD - Colon adenocarcinoma(152;1.7e-06)|BRCA - Breast invasive adenocarcinoma(304;4.45e-06)|Lung(427;0.00163)|STAD - Stomach adenocarcinoma(196;0.00303)|LUSC - Lung squamous cell carcinoma(448;0.008)|READ - Rectum adenocarcinoma(331;0.0419)		CCACACTGGCCGTGGTGCTTG	0.627000													4	84					0	0	1	0	0
SNHG14	104472715	broad.mit.edu	37	15	25334890	25334890	+	RNA	SNP	G	G	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr15:25334890G>T	ENST00000546682.1	+	0	716				SNHG14_ENST00000549804.2_RNA|SNHG14_ENST00000553108.1_RNA	NR_003361.1																						GGTGGTGTTGGTATAAAAAGC	0.542000													3	4					6.4e-05	6.51034e-05	1	1	0
LOC101927648	101927648	broad.mit.edu	37	1	143403554	143403554	+	RNA	SNP	T	T	G			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr1:143403554T>G	ENST00000423249.1	-	0	59																											GGAACAGGATTTCTTTGGCCA	0.468000													2	4					0	0	1	0	0
POM121L9P	29774	broad.mit.edu	37	22	24659813	24659813	+	RNA	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr22:24659813C>T	ENST00000414583.2	+	0	3338					NR_003714.1																						ATCTGCGCACCCGGAGGTGGG	0.607000													4	6					0	0	1	0	0
GABRQ	55879	broad.mit.edu	37	X	151821061	151821061	+	Missense_Mutation	SNP	G	G	C			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chrX:151821061G>C	ENST00000370306.2	+	9	1236	c.1216G>C	c.(1216-1218)Gcc>Ccc	p.A406P		NM_018558.2	NP_061028.3	Q9UN88	GBRT_HUMAN	gamma-aminobutyric acid (GABA) A receptor, theta	406						cell junction|chloride channel complex|integral to plasma membrane|postsynaptic membrane	chloride channel activity|extracellular ligand-gated ion channel activity|GABA-A receptor activity|neurotransmitter transporter activity			breast(1)|central_nervous_system(1)|endometrium(1)|kidney(4)|large_intestine(9)|lung(25)|ovary(3)|pancreas(2)|prostate(2)|skin(3)|upper_aerodigestive_tract(1)	52	Acute lymphoblastic leukemia(192;6.56e-05)					CCCAGCGCAGGCCCCCCTGGC	0.587000													46	52					0	0	1	0	0
ACACB	32	broad.mit.edu	37	12	109687811	109687811	+	Missense_Mutation	SNP	G	G	A	rs3742025		TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr12:109687811G>A	ENST00000338432.7	+	41	5811	c.5692G>A	c.(5692-5694)Ggg>Agg	p.G1898R	ACACB_ENST00000543201.1_Missense_Mutation_p.G564R|ACACB_ENST00000377854.5_Missense_Mutation_p.G1828R|ACACB_ENST00000377848.3_Missense_Mutation_p.G1898R			O00763	ACACB_HUMAN	acetyl-CoA carboxylase beta	1898	Carboxyltransferase.				acetyl-CoA metabolic process|carnitine shuttle|energy reserve metabolic process|fatty acid biosynthetic process|positive regulation of cellular metabolic process|protein homotetramerization|regulation of fatty acid oxidation	cytosol|endomembrane system|Golgi apparatus|membrane	acetyl-CoA carboxylase activity|ATP binding|biotin carboxylase activity|metal ion binding|protein binding			NS(1)|breast(2)|endometrium(9)|kidney(5)|large_intestine(20)|lung(40)|ovary(6)|pancreas(1)|prostate(3)|skin(4)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(2)	95					Biotin(DB00121)	GGATATCATCGGGAAGGATGA	0.507000													6	97					0	0	1	0	0
VWF	7450	broad.mit.edu	37	12	6078430	6078430	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr12:6078430G>A	ENST00000261405.5	-	45	7930	c.7676C>T	c.(7675-7677)tCg>tTg	p.S2559L		NM_000552.3	NP_000543	P04275	VWF_HUMAN	von Willebrand factor	2559					blood coagulation, intrinsic pathway|cell-substrate adhesion|platelet activation|platelet degranulation|protein homooligomerization	endoplasmic reticulum|platelet alpha granule lumen|proteinaceous extracellular matrix|Weibel-Palade body	chaperone binding|collagen binding|glycoprotein binding|immunoglobulin binding|integrin binding|protease binding|protein homodimerization activity|protein N-terminus binding	p.S2559L(1)		NS(1)|breast(6)|central_nervous_system(5)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(8)|large_intestine(25)|lung(41)|ovary(7)|pancreas(2)|prostate(6)|skin(15)|stomach(1)|upper_aerodigestive_tract(5)	129					Antihemophilic Factor(DB00025)	CTGAAAGCCCGAGGGGCAGAC	0.592000													12	27					0	0	1	0	0
ABCA12	26154	broad.mit.edu	37	2	215976354	215976354	+	Silent	SNP	A	A	C			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr2:215976354A>C	ENST00000272895.7	-	2	348	c.129T>G	c.(127-129)acT>acG	p.T43T	ABCA12_ENST00000412081.1_Silent_p.T43T	NM_173076.2	NP_775099.2	Q86UK0	ABCAC_HUMAN	ATP-binding cassette, sub-family A (ABC1), member 12	43					cellular homeostasis|lipid transport	integral to membrane	ATP binding|ATPase activity			NS(3)|breast(5)|central_nervous_system(2)|cervix(1)|endometrium(9)|haematopoietic_and_lymphoid_tissue(2)|kidney(5)|large_intestine(45)|lung(44)|ovary(8)|pancreas(2)|prostate(4)|skin(6)|upper_aerodigestive_tract(2)|urinary_tract(1)	139		Renal(323;0.127)		Epithelial(149;1.01e-05)|all cancers(144;0.00112)|LUSC - Lung squamous cell carcinoma(224;0.00829)|Lung(261;0.011)		ATTTGGTCCGAGTAATAGCCA	0.299000													3	14					0	0	1	0	0
POM121L9P	29774	broad.mit.edu	37	22	24659809	24659809	+	RNA	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr22:24659809G>A	ENST00000414583.2	+	0	3334					NR_003714.1																						CCCTATCTGCGCACCCGGAGG	0.612000													4	5					0	0	1	0	0
HRAS	3265	broad.mit.edu	37	11	534285	534285	+	Missense_Mutation	SNP	C	C	T	rs104894226		TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr11:534285C>T	ENST00000417302.1	-	2	225	c.38G>A	c.(37-39)gGt>gAt	p.G13D	HRAS_ENST00000468682.2_5'UTR|HRAS_ENST00000311189.7_Missense_Mutation_p.G13D|HRAS_ENST00000397596.2_Missense_Mutation_p.G13D|HRAS_ENST00000451590.1_Missense_Mutation_p.G13D|HRAS_ENST00000397594.1_Missense_Mutation_p.G13D	NM_176795.3	NP_789765.1	P01112	RASH_HUMAN	Harvey rat sarcoma viral oncogene homolog	13			G -> C (in FCSS).|G -> D (in FCSS).		activation of MAPKK activity|axon guidance|blood coagulation|cell cycle arrest|cellular senescence|epidermal growth factor receptor signaling pathway|insulin receptor signaling pathway|leukocyte migration|mitotic cell cycle G1/S transition checkpoint|negative regulation of cell proliferation|nerve growth factor receptor signaling pathway|organ morphogenesis|positive regulation of DNA replication|positive regulation of epithelial cell proliferation|Ras protein signal transduction|synaptic transmission	cytosol|Golgi membrane|plasma membrane	GTP binding|GTPase activity|protein C-terminus binding	p.G13V(14)|p.G13D(10)|p.G12_G13insAG(1)		adrenal_gland(1)|bone(3)|breast(7)|cervix(23)|endometrium(4)|haematopoietic_and_lymphoid_tissue(12)|kidney(1)|large_intestine(2)|liver(1)|lung(16)|oesophagus(2)|penis(2)|pituitary(10)|prostate(31)|salivary_gland(24)|skin(184)|soft_tissue(38)|stomach(14)|testis(5)|thymus(1)|thyroid(173)|upper_aerodigestive_tract(122)|urinary_tract(225)	901		all_cancers(49;4.37e-09)|all_epithelial(84;2.09e-06)|Breast(177;0.000162)|Ovarian(85;0.000953)|Medulloblastoma(188;0.0109)|all_neural(188;0.0299)|Lung NSC(207;0.0538)|all_lung(207;0.0713)		all cancers(45;7.63e-28)|Epithelial(43;7.29e-27)|OV - Ovarian serous cystadenocarcinoma(40;7.15e-21)|BRCA - Breast invasive adenocarcinoma(625;3.56e-05)|Lung(200;0.0375)|LUSC - Lung squamous cell carcinoma(625;0.0703)	Sulindac(DB00605)	CTTGCCCACACCGCCGGCGCC	0.642000		6	Mis		"""infrequent sarcomas, rare other types"""	"""rhadomyosarcoma, ganglioneuroblastoma, bladder"""			Costello syndrome	HNSCC(11;0.0054)			11	35					0	0	1	0	0
ANKRD17	26057	broad.mit.edu	37	4	73956393	73956393	+	Missense_Mutation	SNP	T	T	C			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr4:73956393T>C	ENST00000358602.4	-	29	7068	c.6952A>G	c.(6952-6954)Agt>Ggt	p.S2318G	ANKRD17_ENST00000330838.6_Missense_Mutation_p.S2067G|ANKRD17_ENST00000509867.2_Missense_Mutation_p.S2205G	NM_032217.3	NP_115593.3	O75179	ANR17_HUMAN	ankyrin repeat domain 17	2318					interspecies interaction between organisms	cytoplasm|nucleus	RNA binding			NS(3)|breast(2)|central_nervous_system(1)|endometrium(11)|haematopoietic_and_lymphoid_tissue(1)|kidney(6)|large_intestine(15)|lung(39)|ovary(6)|pancreas(1)|prostate(3)|skin(5)|upper_aerodigestive_tract(3)	96	Breast(15;0.000295)		Epithelial(6;8.86e-07)|OV - Ovarian serous cystadenocarcinoma(6;6.22e-06)|all cancers(17;1.51e-05)|Lung(101;0.103)|LUSC - Lung squamous cell carcinoma(112;0.154)			CCTGAGGGACTTGGAGCAGGT	0.378000													27	33					0	0	1	0	0
RELN	5649	broad.mit.edu	37	7	103301857	103301857	+	Silent	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr7:103301857G>A	ENST00000428762.1	-	12	1566	c.1407C>T	c.(1405-1407)acC>acT	p.T469T	RELN_ENST00000343529.5_Silent_p.T469T|RELN_ENST00000424685.2_Silent_p.T469T	NM_005045.3	NP_005036.2	P78509	RELN_HUMAN	reelin	469					axon guidance|cell adhesion|cerebral cortex tangential migration|glial cell differentiation|neuron migration|peptidyl-tyrosine phosphorylation|positive regulation of protein kinase activity|positive regulation of small GTPase mediated signal transduction|response to pain|spinal cord patterning	cytoplasm|dendrite|extracellular space|proteinaceous extracellular matrix	metal ion binding|protein serine/threonine/tyrosine kinase activity|serine-type peptidase activity			NS(3)|breast(8)|central_nervous_system(3)|cervix(1)|endometrium(13)|haematopoietic_and_lymphoid_tissue(4)|kidney(6)|large_intestine(43)|lung(101)|ovary(9)|pancreas(2)|prostate(4)|skin(14)|stomach(2)|upper_aerodigestive_tract(12)|urinary_tract(2)	227				COAD - Colon adenocarcinoma(1;8.98e-05)|Colorectal(1;0.00184)		TCCCATAACCGGTAGTGTCCA	0.448000													3	45					0	0	1	0	0
SLITRK4	139065	broad.mit.edu	37	X	142717033	142717033	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chrX:142717033G>A	ENST00000381779.4	-	2	2117	c.1892C>T	c.(1891-1893)aCg>aTg	p.T631M	SLITRK4_ENST00000338017.4_Missense_Mutation_p.T631M|SLITRK4_ENST00000356928.1_Missense_Mutation_p.T631M	NM_001184749.2|NM_001184750.1|NM_173078.4	NP_001171678.1|NP_001171679.1|NP_775101.1	Q8IW52	SLIK4_HUMAN	SLIT and NTRK-like family, member 4	631						integral to membrane				autonomic_ganglia(1)|breast(1)|endometrium(6)|kidney(2)|large_intestine(11)|lung(27)|ovary(2)|pancreas(2)|prostate(4)|skin(2)|upper_aerodigestive_tract(2)	60	Acute lymphoblastic leukemia(192;6.56e-05)					AACAAACACCGTTAAAATGAG	0.473000													45	81					0	0	1	0	0
C5AR1	728	broad.mit.edu	37	19	47823367	47823367	+	Silent	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr19:47823367C>T	ENST00000355085.3	+	2	355	c.333C>T	c.(331-333)atC>atT	p.I111I		NM_001736.3	NP_001727.1	P21730	C5AR_HUMAN	complement component 5a receptor 1	111					activation of MAPK activity|activation of phospholipase C activity|cellular defense response|elevation of cytosolic calcium ion concentration|immune response|sensory perception of chemical stimulus	integral to plasma membrane	C5a anaphylatoxin receptor activity			central_nervous_system(1)|endometrium(1)|large_intestine(3)|lung(11)|ovary(2)|prostate(1)|skin(1)	20		all_cancers(25;2e-09)|all_epithelial(76;9.95e-08)|all_lung(116;7.27e-07)|Lung NSC(112;1.6e-06)|Ovarian(192;0.0139)|all_neural(266;0.026)|Breast(70;0.0503)		all cancers(93;0.000267)|OV - Ovarian serous cystadenocarcinoma(262;0.000618)|Epithelial(262;0.0142)|GBM - Glioblastoma multiforme(486;0.0242)		CCTGCAGCATCCTGCCCTCCC	0.617000													42	46					0	0	1	0	0
SORCS3	22986	broad.mit.edu	37	10	106927094	106927094	+	Missense_Mutation	SNP	G	G	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr10:106927094G>T	ENST00000369701.3	+	13	2115	c.1888G>T	c.(1888-1890)Gtc>Ttc	p.V630F		NM_014978.1	NP_055793.1	Q9UPU3	SORC3_HUMAN	sortilin-related VPS10 domain containing receptor 3	630						integral to membrane	neuropeptide receptor activity			autonomic_ganglia(1)|breast(3)|central_nervous_system(1)|cervix(1)|endometrium(6)|haematopoietic_and_lymphoid_tissue(2)|kidney(6)|large_intestine(19)|lung(63)|ovary(6)|pancreas(1)|prostate(6)|skin(8)|stomach(3)|upper_aerodigestive_tract(3)|urinary_tract(2)	131		Colorectal(252;0.134)|Breast(234;0.142)|Lung NSC(174;0.191)		Epithelial(162;1.58e-07)|all cancers(201;1.02e-05)|BRCA - Breast invasive adenocarcinoma(275;0.0628)		ACCTCTGCCAGTCAGGCATTT	0.458000													17	22					1.02788e-11	1.10264e-11	1	1	0
TRPV3	162514	broad.mit.edu	37	17	3433367	3433367	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr17:3433367G>A	ENST00000301365.4	-	9	1327	c.1196C>T	c.(1195-1197)aCg>aTg	p.T399M	TRPV3_ENST00000572519.1_Missense_Mutation_p.T399M|TRPV3_ENST00000576742.1_Missense_Mutation_p.T399M			Q8NET8	TRPV3_HUMAN	transient receptor potential cation channel, subfamily V, member 3	399						integral to membrane	calcium channel activity	p.T399M(1)		breast(1)|endometrium(4)|kidney(1)|large_intestine(6)|lung(12)|ovary(5)|prostate(1)|skin(2)|stomach(1)|urinary_tract(2)	35					Menthol(DB00825)	TGAGTTGTCCGTGGTGGTGTC	0.607000													29	34					0	0	1	0	0
MCM7	4176	broad.mit.edu	37	7	99695255	99695255	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr7:99695255G>A	ENST00000303887.5	-	9	1744	c.1099C>T	c.(1099-1101)Cga>Tga	p.R367*	MCM7_ENST00000354230.3_Nonsense_Mutation_p.R191*|MCM7_ENST00000343023.6_Intron	NM_005916.3	NP_005907.3	P33993	MCM7_HUMAN	minichromosome maintenance complex component 7	367	MCM.				cell cycle checkpoint|DNA strand elongation involved in DNA replication|DNA-dependent DNA replication initiation|G1/S transition of mitotic cell cycle|M/G1 transition of mitotic cell cycle|regulation of phosphorylation|response to DNA damage stimulus|S phase of mitotic cell cycle	chromatin|MCM complex	ATP binding|protein binding			endometrium(1)|kidney(5)|large_intestine(5)|lung(4)|ovary(1)|stomach(1)	17	Lung NSC(181;0.0181)|all_lung(186;0.0284)|Esophageal squamous(72;0.0439)				Atorvastatin(DB01076)	TTCATGCCTCGAGGAGACTGG	0.517000													21	372					0	0	1	0	0
SALL3	27164	broad.mit.edu	37	18	76753467	76753467	+	Silent	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr18:76753467C>T	ENST00000536229.3	+	1	1786	c.1077C>T	c.(1075-1077)ccC>ccT	p.P359P	SALL3_ENST00000537592.2_Silent_p.P492P|SALL3_ENST00000575389.2_Silent_p.P492P			Q9BXA9	SALL3_HUMAN	spalt-like transcription factor 3	492					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding	p.P492P(1)		NS(2)|breast(1)|central_nervous_system(1)|endometrium(5)|kidney(3)|large_intestine(8)|lung(40)|ovary(4)|prostate(5)|skin(2)|stomach(1)|upper_aerodigestive_tract(2)	74		Esophageal squamous(42;0.129)|Melanoma(33;0.16)|Prostate(75;0.167)		OV - Ovarian serous cystadenocarcinoma(15;4.69e-06)|BRCA - Breast invasive adenocarcinoma(31;0.0256)		ACAACGTGCCCACCTGCTCGG	0.647000													12	1					0	0	1	0	0
GNL3	26354	broad.mit.edu	37	3	52727447	52727447	+	Missense_Mutation	SNP	A	A	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr3:52727447A>T	ENST00000394799.2	+	12	1385	c.1175A>T	c.(1174-1176)cAt>cTt	p.H392L	GNL3_ENST00000418458.1_Missense_Mutation_p.H404L	NM_206825.1	NP_996561.1	Q9BVP2	GNL3_HUMAN	guanine nucleotide binding protein-like 3 (nucleolar)	404	Intermediate (By similarity).				regulation of cell proliferation	nucleolus	GTP binding|protein binding			breast(4)|endometrium(3)|large_intestine(3)|lung(2)	12				BRCA - Breast invasive adenocarcinoma(193;6.75e-05)|Kidney(197;0.000611)|KIRC - Kidney renal clear cell carcinoma(197;0.000773)|OV - Ovarian serous cystadenocarcinoma(275;0.048)		TACTATTGCCATCCCCCTACA	0.378000													58	66					0	0	1	0	0
SLC25A15	10166	broad.mit.edu	37	13	41383686	41383686	+	Silent	SNP	G	G	A	rs144478411		TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr13:41383686G>A	ENST00000338625.4	+	7	1025	c.789G>A	c.(787-789)acG>acA	p.T263T		NM_014252.3	NP_055067.1	Q9Y619	ORNT1_HUMAN	solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15	263					cellular amino acid metabolic process|mitochondrial ornithine transport|urea cycle	integral to membrane|mitochondrial inner membrane	L-ornithine transmembrane transporter activity			endometrium(4)|kidney(1)|large_intestine(3)|lung(4)|stomach(1)|urinary_tract(1)	14		Lung NSC(96;3.55e-06)|Breast(139;0.00394)|Prostate(109;0.0181)|Lung SC(185;0.0262)|Hepatocellular(188;0.194)		all cancers(112;1.48e-08)|Epithelial(112;7.51e-06)|OV - Ovarian serous cystadenocarcinoma(117;0.000191)|GBM - Glioblastoma multiforme(144;0.00231)|BRCA - Breast invasive adenocarcinoma(63;0.0704)	L-Ornithine(DB00129)	TAGGAATAACGGCCTTATATT	0.443000													4	58					0	0	1	0	0
SH3KBP1	30011	broad.mit.edu	37	X	19854267	19854267	+	Silent	SNP	A	A	C			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chrX:19854267A>C	ENST00000397821.3	-	2	428	c.138T>G	c.(136-138)ggT>ggG	p.G46G	SH3KBP1_ENST00000379697.3_Silent_p.G46G	NM_031892.2	NP_114098.1	Q96B97	SH3K1_HUMAN	SH3-domain kinase binding protein 1	46	SH3 1.				apoptosis|cell-cell signaling|endocytosis|epidermal growth factor receptor signaling pathway|negative regulation of epidermal growth factor receptor signaling pathway	cytoplasmic vesicle membrane|cytoskeleton|cytosol|focal adhesion|nucleus|synapse|synaptosome	SH3 domain binding			breast(3)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(8)|lung(8)|skin(4)	29						CAGGGAACAAACCTCTCCTGC	0.522000													8	160					0	0	1	0	0
TRIM42	287015	broad.mit.edu	37	3	140407315	140407315	+	Silent	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr3:140407315C>T	ENST00000286349.3	+	3	1982	c.1791C>T	c.(1789-1791)aaC>aaT	p.N597N		NM_152616.4	NP_689829.3	Q8IWZ5	TRI42_HUMAN	tripartite motif containing 42	597						intracellular	zinc ion binding			breast(1)|central_nervous_system(1)|cervix(2)|endometrium(2)|large_intestine(11)|lung(33)|ovary(2)|pancreas(1)|prostate(6)|skin(6)|upper_aerodigestive_tract(2)|urinary_tract(2)	69						ACTCATTCAACGATGGCTCTG	0.547000													53	71					0	0	1	0	0
CAD	790	broad.mit.edu	37	2	27445903	27445903	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr2:27445903G>A	ENST00000264705.4	+	6	969	c.807G>A	c.(805-807)atG>atA	p.M269I	CAD_ENST00000403525.1_Missense_Mutation_p.M269I	NM_004341.3	NP_004332.2	P27708	PYR1_HUMAN	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	269	GATase (Glutamine amidotransferase).|Glutamine amidotransferase type-1.				'de novo' pyrimidine base biosynthetic process|drug metabolic process|glutamine metabolic process|peptidyl-threonine phosphorylation|protein autophosphorylation|pyrimidine nucleoside biosynthetic process|pyrimidine nucleotide biosynthetic process	cytosol|neuronal cell body|nuclear matrix|terminal button	aspartate binding|aspartate carbamoyltransferase activity|ATP binding|carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|dihydroorotase activity|enzyme binding|identical protein binding|metal ion binding|protein kinase activity			NS(1)|breast(1)|cervix(1)|endometrium(9)|haematopoietic_and_lymphoid_tissue(1)|kidney(7)|large_intestine(19)|lung(40)|ovary(6)|pancreas(2)|prostate(2)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	92	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)				L-Aspartic Acid(DB00128)|L-Glutamine(DB00130)	CTTACAAGATGAGGTGGGACT	0.522000													36	35					0	0	1	0	0
CROT	54677	broad.mit.edu	37	7	86991093	86991093	+	Missense_Mutation	SNP	C	C	G			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr7:86991093C>G	ENST00000331536.3	+	6	657	c.472C>G	c.(472-474)Caa>Gaa	p.Q158E	CROT_ENST00000442291.1_Missense_Mutation_p.Q158E|CROT_ENST00000419147.2_Missense_Mutation_p.Q186E	NM_021151.3	NP_066974.2	Q9UKG9	OCTC_HUMAN	carnitine O-octanoyltransferase	158					fatty acid beta-oxidation using acyl-CoA oxidase|generation of precursor metabolites and energy|transport	peroxisomal matrix	carnitine O-octanoyltransferase activity			NS(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(4)|lung(21)|ovary(2)|prostate(2)|skin(1)|upper_aerodigestive_tract(1)	37	Esophageal squamous(14;0.0058)|all_lung(186;0.201)|Lung NSC(181;0.203)				L-Carnitine(DB00583)	AGATATGAATCAATTCCGAAT	0.299000													3	33					0	0	1	0	0
KRTAP4-6	81871	broad.mit.edu	37	17	39296167	39296167	+	Silent	SNP	A	A	G			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr17:39296167A>G	ENST00000345847.4	-	1	572	c.573T>C	c.(571-573)atT>atC	p.I191I		NM_030976.1	NP_112238.1	Q9BYQ5	KRA46_HUMAN	keratin associated protein 4-6	187						keratin filament				endometrium(3)|haematopoietic_and_lymphoid_tissue(2)|kidney(1)|lung(1)|prostate(1)|urinary_tract(1)	9						GGCAGGTGGAAATGACACAGG	0.627000													4	14					0	0	1	0	0
MID1	4281	broad.mit.edu	37	X	10417481	10417481	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chrX:10417481C>T	ENST00000317552.4	-	10	2331	c.1931G>A	c.(1930-1932)tGg>tAg	p.W644*	MID1_ENST00000380780.1_Nonsense_Mutation_p.W644*|MID1_ENST00000380779.1_Nonsense_Mutation_p.W644*|MID1_ENST00000453318.2_Nonsense_Mutation_p.W644*|MID1_ENST00000380785.1_Nonsense_Mutation_p.W644*|MID1_ENST00000380787.1_Nonsense_Mutation_p.W644*|MID1_ENST00000380782.2_3'UTR	NM_000381.3|NM_033289.1	NP_000372.1|NP_150631.1	O15344	TRI18_HUMAN	midline 1 (Opitz/BBB syndrome)	644	B30.2/SPRY.				microtubule cytoskeleton organization|pattern specification process|positive regulation of stress-activated MAPK cascade	cytoplasm|microtubule|microtubule associated complex|spindle	ligase activity|ubiquitin protein ligase binding|zinc ion binding			breast(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(5)|lung(9)|ovary(2)|pancreas(1)|skin(3)|upper_aerodigestive_tract(1)	26						ACACTTGTTCCACACGGTGAA	0.537000													44	46					0	0	1	0	0
DNAJC6	9829	broad.mit.edu	37	1	65854979	65854979	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr1:65854979C>T	ENST00000395325.3	+	10	1220	c.1063C>T	c.(1063-1065)Cag>Tag	p.Q355*	DNAJC6_ENST00000371069.4_Nonsense_Mutation_p.Q412*|DNAJC6_ENST00000263441.7_Nonsense_Mutation_p.Q342*	NM_014787.3	NP_055602.1	O75061	AUXI_HUMAN	DnaJ (Hsp40) homolog, subfamily C, member 6	355	C2 tensin-type.				cellular membrane organization|post-Golgi vesicle-mediated transport	cytosol	heat shock protein binding|protein tyrosine phosphatase activity|SH3 domain binding			NS(1)|breast(3)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(3)|lung(22)|ovary(1)|prostate(2)|skin(1)	39						AAAATATCCTCAGCTATTTCA	0.373000													12	22					0	0	1	0	0
ZNF781	163115	broad.mit.edu	37	19	38161002	38161002	+	Silent	SNP	A	A	G			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr19:38161002A>G	ENST00000358582.4	-	4	796	c.48T>C	c.(46-48)tgT>tgC	p.C16C	ZNF781_ENST00000590008.1_Silent_p.C16C|ZFP30_ENST00000586732.1_Intron	NM_152605.3	NP_689818.2	Q8N8C0	ZN781_HUMAN	zinc finger protein 781	16					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			NS(1)|breast(2)|large_intestine(5)|lung(11)|prostate(2)|skin(2)|upper_aerodigestive_tract(1)	24						GTTGAAAGTTACAAGCAGTCT	0.363000													10	40					0	0	1	0	0
HECA	51696	broad.mit.edu	37	6	139488110	139488110	+	Missense_Mutation	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr6:139488110C>T	ENST00000367658.2	+	2	1246	c.961C>T	c.(961-963)Cac>Tac	p.H321Y	RP1-225E12.2_ENST00000586266.1_RNA|RP1-225E12.2_ENST00000590679.1_RNA|RP1-225E12.2_ENST00000587577.1_RNA|RP1-225E12.2_ENST00000588638.1_RNA|RP1-225E12.2_ENST00000586229.1_RNA|RP1-225E12.2_ENST00000588529.1_RNA|RP1-225E12.3_ENST00000585874.1_RNA|RP1-225E12.2_ENST00000589192.1_RNA|RP1-225E12.2_ENST00000415194.2_RNA	NM_016217.2	NP_057301.1	Q9UBI9	HDC_HUMAN	headcase homolog (Drosophila)	321					respiratory tube development					endometrium(4)|kidney(1)|large_intestine(3)|lung(4)|ovary(1)|prostate(1)|skin(1)	15				GBM - Glioblastoma multiforme(68;0.000252)|OV - Ovarian serous cystadenocarcinoma(155;0.000387)		CAGAAATGCCCACTTTGATTA	0.602000													33	64					0	0	1	0	0
ZNF614	80110	broad.mit.edu	37	19	52519708	52519708	+	Silent	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr19:52519708G>A	ENST00000270649.6	-	5	1687	c.1143C>T	c.(1141-1143)acC>acT	p.T381T	ZNF614_ENST00000356322.6_Intron	NM_025040.3	NP_079316.2	Q8N883	ZN614_HUMAN	zinc finger protein 614	381					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding	p.T381T(1)		NS(1)|endometrium(2)|kidney(1)|large_intestine(6)|lung(9)|ovary(2)|pancreas(1)|skin(1)|upper_aerodigestive_tract(1)	24		all_neural(266;0.0505)		GBM - Glioblastoma multiforme(134;0.00513)|OV - Ovarian serous cystadenocarcinoma(262;0.0177)		TGCTCTTCACGGTAAAGCCTT	0.453000													5	151					0	0	1	0	0
STAT6	6778	broad.mit.edu	37	12	57490852	57490852	+	Splice_Site	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr12:57490852G>A	ENST00000300134.3	-	20	2549	c.2224C>T	c.(2224-2226)Cag>Tag	p.Q742*	STAT6_ENST00000454075.3_Splice_Site_p.Q742*|STAT6_ENST00000543873.2_Splice_Site_p.Q742*|STAT6_ENST00000537215.2_Splice_Site_p.Q632*|STAT6_ENST00000538913.2_Splice_Site_p.Q632*|STAT6_ENST00000556155.1_Splice_Site_p.Q742*	NM_001178078.1|NM_003153.4	NP_001171549.1|NP_003144.3	P42226	STAT6_HUMAN	signal transducer and activator of transcription 6, interleukin-4 induced	742					regulation of transcription from RNA polymerase II promoter	cytosol|nucleus	calcium ion binding|DNA binding|protein binding|sequence-specific DNA binding transcription factor activity|signal transducer activity			breast(1)|cervix(1)|endometrium(4)|haematopoietic_and_lymphoid_tissue(5)|kidney(2)|large_intestine(2)|lung(8)|ovary(4)|skin(1)	28						GTCACTCACTGGGGGTGAGGC	0.617000													30	39					0	0	1	0	0
MUM1L1	139221	broad.mit.edu	37	X	105450563	105450563	+	Missense_Mutation	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chrX:105450563C>T	ENST00000337685.2	+	5	1923	c.1138C>T	c.(1138-1140)Cgc>Tgc	p.R380C	MUM1L1_ENST00000372552.1_Missense_Mutation_p.R380C|MUM1L1_ENST00000357175.2_Missense_Mutation_p.R380C	NM_152423.4	NP_689636.3	Q5H9M0	MUML1_HUMAN	melanoma associated antigen (mutated) 1-like 1	380										autonomic_ganglia(1)|breast(3)|central_nervous_system(1)|endometrium(2)|kidney(1)|large_intestine(6)|lung(11)|ovary(2)|pancreas(1)|skin(2)|upper_aerodigestive_tract(1)	31						AGAACTTCCACGCTTCATTTT	0.373000													5	10					0	0	1	0	0
MUC17	140453	broad.mit.edu	37	7	100680389	100680389	+	Missense_Mutation	SNP	G	G	C			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr7:100680389G>C	ENST00000306151.4	+	3	5756	c.5692G>C	c.(5692-5694)Gtg>Ctg	p.V1898L		NM_001040105.1	NP_001035194.1	Q685J3	MUC17_HUMAN	mucin 17, cell surface associated	1898	59 X approximate tandem repeats.|Ser-rich.					extracellular region|integral to membrane|plasma membrane	extracellular matrix constituent, lubricant activity			NS(3)|breast(14)|central_nervous_system(2)|cervix(2)|endometrium(27)|haematopoietic_and_lymphoid_tissue(2)|kidney(18)|large_intestine(28)|lung(179)|ovary(19)|pancreas(1)|prostate(13)|skin(26)|stomach(2)|upper_aerodigestive_tract(3)|urinary_tract(4)	343	Lung NSC(181;0.136)|all_lung(186;0.182)					CAGCACACCTGTGACCACTTA	0.493000													154	186					0	0	1	0	0
RFPL2	10739	broad.mit.edu	37	22	32587237	32587237	+	Missense_Mutation	SNP	A	A	G			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr22:32587237A>G	ENST00000400236.3	-	5	1594	c.389T>C	c.(388-390)cTt>cCt	p.L130P	RFPL2_ENST00000489846.1_5'UTR|RFPL2_ENST00000248980.4_Missense_Mutation_p.L159P|RFPL2_ENST00000400237.1_Missense_Mutation_p.L220P|RFPL2_ENST00000248983.4_Missense_Mutation_p.L130P	NM_001098527.2	NP_001091997.2	O75678	RFPL2_HUMAN	ret finger protein-like 2	220							zinc ion binding			endometrium(2)|kidney(4)|large_intestine(3)|lung(9)|ovary(1)|skin(2)	21						TCTCTCGGCAAGGTCTTGCCG	0.567000													66	61					0	0	1	0	0
IGHV1OR16-3	28313	broad.mit.edu	37	16	32070612	32070612	+	RNA	SNP	A	A	C			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr16:32070612A>C	ENST00000566806.1	-	0	499																											GGTCTCCTGCAAGGCTTCTGG	0.552000													6	71					0	0	1	0	0
COL11A1	1301	broad.mit.edu	37	1	103405911	103405911	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr1:103405911G>A	ENST00000358392.2	-	43	3709	c.3392C>T	c.(3391-3393)gCc>gTc	p.A1131V	COL11A1_ENST00000353414.4_Missense_Mutation_p.A1080V|COL11A1_ENST00000512756.1_Missense_Mutation_p.A1003V|COL11A1_ENST00000370096.3_Missense_Mutation_p.A1119V	NM_080629.2	NP_542196.2	P12107	COBA1_HUMAN	collagen, type XI, alpha 1	1119	Triple-helical region.				collagen fibril organization|detection of mechanical stimulus involved in sensory perception of sound|visual perception	collagen type XI	extracellular matrix binding|extracellular matrix structural constituent|protein binding, bridging			NS(3)|biliary_tract(1)|breast(5)|central_nervous_system(2)|cervix(1)|endometrium(17)|kidney(8)|large_intestine(28)|lung(157)|ovary(6)|pancreas(2)|prostate(6)|skin(9)|stomach(1)|upper_aerodigestive_tract(11)|urinary_tract(1)	258		all_epithelial(167;2.52e-07)|all_lung(203;3.11e-05)|Lung NSC(277;6.61e-05)|Breast(1374;0.181)		Lung(183;0.186)|all cancers(265;0.242)|Epithelial(280;0.248)		AGGGGAGCCGGCAGGACCAGC	0.473000													24	48					0	0	1	0	0
ABCB4	5244	broad.mit.edu	37	7	87092154	87092154	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr7:87092154G>A	ENST00000265723.4	-	4	317	c.206C>T	c.(205-207)tCa>tTa	p.S69L	ABCB4_ENST00000358400.3_Missense_Mutation_p.S69L|ABCB4_ENST00000545634.1_Missense_Mutation_p.S69L|ABCB4_ENST00000453593.1_Missense_Mutation_p.S69L|ABCB4_ENST00000359206.3_Missense_Mutation_p.S69L	NM_000443.3|NM_018849.2	NP_000434.1|NP_061337.1	P21439	MDR3_HUMAN	ATP-binding cassette, sub-family B (MDR/TAP), member 4	69	ABC transmembrane type-1 1.			IMAIAHGSGLP -> RGSSRVDLQAC (in Ref. 5; CAA84542).	cellular lipid metabolic process	apical plasma membrane|Golgi membrane|integral to plasma membrane|intercellular canaliculus|membrane fraction	ATP binding|xenobiotic-transporting ATPase activity			breast(5)|endometrium(7)|kidney(2)|large_intestine(15)|lung(32)|ovary(4)|pancreas(2)|prostate(4)|skin(4)|upper_aerodigestive_tract(1)|urinary_tract(1)	77	Esophageal squamous(14;0.0058)|all_lung(186;0.201)|Lung NSC(181;0.203)					GGGGAGACCTGATCCGTGAGC	0.393000													4	38					0	0	1	0	0
MEIS2	4212	broad.mit.edu	37	15	37385842	37385842	+	Silent	SNP	G	G	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr15:37385842G>A	ENST00000338564.5	-	7	1025	c.579C>T	c.(577-579)gaC>gaT	p.D193D	MEIS2_ENST00000557796.2_Silent_p.D180D|MEIS2_ENST00000382766.2_Silent_p.D193D|MEIS2_ENST00000340545.5_Silent_p.D180D|MEIS2_ENST00000397624.3_Silent_p.D105D|MEIS2_ENST00000559085.1_Silent_p.D180D|MEIS2_ENST00000559561.1_Silent_p.D193D|MEIS2_ENST00000424352.2_Silent_p.D193D|MEIS2_ENST00000561208.1_Silent_p.D193D|MEIS2_ENST00000444725.1_Silent_p.D193D|MEIS2_ENST00000397620.2_Silent_p.D105D|MEIS2_ENST00000219869.9_Silent_p.D47D	NM_001220482.1	NP_001207411.1	O14770	MEIS2_HUMAN	Meis homeobox 2	193					negative regulation of transcription from RNA polymerase II promoter|transcription from RNA polymerase II promoter	nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|transcription corepressor activity			breast(1)|central_nervous_system(1)|endometrium(2)|large_intestine(7)|lung(17)|ovary(3)|pancreas(1)|prostate(1)|skin(2)|urinary_tract(1)	36		all_epithelial(112;9.77e-14)|Lung NSC(122;1.42e-09)|all_lung(180;2.2e-08)|Ovarian(310;0.134)|Melanoma(134;0.155)		all cancers(64;9.33e-21)|GBM - Glioblastoma multiforme(113;1.71e-06)|BRCA - Breast invasive adenocarcinoma(123;0.0288)		TGGAGCTGCCGTCTCTTTCAT	0.478000													4	105					0	0	1	0	0
HIST1H1T	3010	broad.mit.edu	37	6	26107973	26107973	+	Missense_Mutation	SNP	G	G	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr6:26107973G>T	ENST00000338379.4	-	1	391	c.349C>A	c.(349-351)Cct>Act	p.P117T		NM_005323.3	NP_005314.2	P22492	H1T_HUMAN	histone cluster 1, H1t	117					cell differentiation|multicellular organismal development|nucleosome assembly|spermatogenesis	nucleosome	DNA binding			breast(2)|endometrium(1)|lung(3)|ovary(2)|prostate(1)	9						GTAGATTTAGGAATCACCTTC	0.453000													4	78					0.150653	0.150653	1	1	0
SMOC2	64094	broad.mit.edu	37	6	168910762	168910762	+	Silent	SNP	C	C	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr6:168910762C>T	ENST00000354536.5	+	2	472	c.252C>T	c.(250-252)tgC>tgT	p.C84C	SMOC2_ENST00000356284.2_Silent_p.C84C	NM_022138.2	NP_071421.1	Q9H3U7	SMOC2_HUMAN	SPARC related modular calcium binding 2	84	Kazal-like.				signal transduction	basement membrane	calcium ion binding			NS(1)|autonomic_ganglia(1)|breast(2)|endometrium(1)|kidney(1)|large_intestine(6)|lung(12)|ovary(2)|prostate(1)|skin(1)|upper_aerodigestive_tract(2)|urinary_tract(2)	32		Breast(66;0.000141)|Esophageal squamous(34;0.222)|Ovarian(120;0.231)		OV - Ovarian serous cystadenocarcinoma(33;1.31e-19)|BRCA - Breast invasive adenocarcinoma(81;3.06e-06)|GBM - Glioblastoma multiforme(31;0.00109)		GAGGAAACTGCAAAGGTAAGC	0.408000													3	33					0	0	1	0	0
NEB	4703	broad.mit.edu	37	2	152589670	152589670	+	Translation_Start_Site	DEL	T	T	-			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr2:152589670delT	ENST00000427231.2	-	0	203				NEB_ENST00000603639.1_Start_Codon_Del|NEB_ENST00000409198.1_Start_Codon_Del|NEB_ENST00000172853.10_Start_Codon_Del|NEB_ENST00000397345.3_Start_Codon_Del|NEB_ENST00000604864.1_Start_Codon_Del	NM_001164507.1|NM_001271208.1	NP_001157979|NP_001258137.1	P20929	NEBU_HUMAN	nebulin						muscle filament sliding|muscle organ development|regulation of actin filament length|somatic muscle development	actin cytoskeleton|cytosol|Z disc	actin binding|structural constituent of muscle			NS(5)|autonomic_ganglia(3)|breast(9)|central_nervous_system(5)|cervix(3)|endometrium(35)|kidney(16)|large_intestine(77)|liver(1)|lung(99)|ovary(9)|pancreas(3)|prostate(13)|skin(7)|stomach(8)|upper_aerodigestive_tract(6)|urinary_tract(2)	301				BRCA - Breast invasive adenocarcinoma(221;0.219)		TCATCTGCCATTTTTCCAGAG	0.348													2	4	---	---	---	---					
FAM193A	8603	broad.mit.edu	37	4	2702235	2702237	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr4:2702235_2702237delAAG	ENST00000324666.5	+	17	3814_3816	c.3463_3465delAAG	c.(3463-3465)aagdel	p.K1158del	FAM193A_ENST00000545951.1_In_Frame_Del_p.K1158del|FAM193A_ENST00000505311.1_In_Frame_Del_p.K1158del|FAM193A_ENST00000382839.3_In_Frame_Del_p.K1158del|FAM193A_ENST00000502458.1_In_Frame_Del_p.K1180del	NM_001256666.1	NP_001243595.1	P78312	F193A_HUMAN	family with sequence similarity 193, member A	1158	Poly-Lys.									NS(2)|breast(1)|endometrium(4)|kidney(4)|large_intestine(3)|lung(12)|ovary(4)|prostate(1)|skin(5)|upper_aerodigestive_tract(1)|urinary_tract(3)	40						CAAGAAAAATAAGAAGAAGAAAG	0.488													16	34	---	---	---	---					
SSPO	23145	broad.mit.edu	37	7	149509596	149509597	+	RNA	INS	-	-	C			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr7:149509596_149509597insC	ENST00000378016.2	+	0	9922							A2VEC9	SSPO_HUMAN	SCO-spondin						cell adhesion	extracellular space	peptidase inhibitor activity					Melanoma(164;0.165)|Ovarian(565;0.177)		OV - Ovarian serous cystadenocarcinoma(82;0.00625)			CCAGGGAGAGAGGCCAGGGTGG	0.634													20	23	---	---	---	---					
RTN4RL2	349667	broad.mit.edu	37	11	57243990	57243990	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr11:57243990delC	ENST00000335099.3	+	3	1186	c.869delC	c.(868-870)accfs	p.T290fs	RP11-624G17.3_ENST00000528885.1_RNA	NM_178570.1	NP_848665.1	Q86UN3	R4RL2_HUMAN	reticulon 4 receptor-like 2	290	LRRCT.				axon regeneration	anchored to plasma membrane	receptor activity			NS(1)|endometrium(1)|large_intestine(2)|lung(2)	6						ACCTGCGCCACCCCCCCGGAG	0.796													2	4	---	---	---	---					
KMT2D	8085	broad.mit.edu	37	12	49434785	49434789	+	Frame_Shift_Del	DEL	AGCCA	AGCCA	-			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr12:49434785_49434789delAGCCA	ENST00000301067.7	-	31	6763_6767	c.6764_6768delTGGCT	c.(6763-6768)ttggctfs	p.LA2255fs		NM_003482.3	NP_003473.3			lysine (K)-specific methyltransferase 2D																		TCTCAGGCACAGCCAAGTTATCCAG	0.644													16	42	---	---	---	---					
TRAV9-1	28678	broad.mit.edu	37	14	22279845	22279846	+	RNA	INS	-	-	T			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr14:22279845_22279846insT	ENST00000390431.3	+	0	46																											TAATTTGTTTATTTTTTTTTCA	0.406													2	4	---	---	---	---					
KANSL1	284058	broad.mit.edu	37	17	44128062	44128062	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr17:44128062delC	ENST00000262419.6	-	7	2327	c.1857delG	c.(1855-1857)cggfs	p.R619fs	KANSL1_ENST00000572904.1_Frame_Shift_Del_p.R619fs|KANSL1_ENST00000574590.1_Frame_Shift_Del_p.R619fs|KANSL1_ENST00000575318.1_Frame_Shift_Del_p.R619fs|KANSL1_ENST00000393476.3_5'UTR|KANSL1_ENST00000432791.1_Frame_Shift_Del_p.R619fs	NM_001193466.1	NP_001180395	Q7Z3B3	K1267_HUMAN	KAT8 regulatory NSL complex subunit 1	619						MLL1 complex	protein binding										TTGTGCTGTTCCGGTGAACCT	0.473													10	20	---	---	---	---					
SIRT7	51547	broad.mit.edu	37	17	79872214	79872215	+	Frame_Shift_Ins	INS	-	-	A			TCGA-CF-A47T-01A-11D-A23U-08	TCGA-CF-A47T-10A-01D-A23U-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d629fc40-ebf2-4d3b-acc3-b5e23bc28dc6	80ca6d54-d867-4c1d-9a4b-4aa2a038566f	g.chr17:79872214_79872215insA	ENST00000328666.6	-	7	833_834	c.771_772insT	c.(769-774)gctgccfs	p.A258fs		NM_016538.2	NP_057622.1	Q9NRC8	SIRT7_HUMAN	sirtuin 7	258	Deacetylase sirtuin-type.				chromatin silencing|positive regulation of transcription on exit from mitosis|protein deacetylation|rRNA transcription	cytoplasm|nucleolus organizer region	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides|NAD+ binding|protein binding|zinc ion binding			breast(1)|endometrium(2)|kidney(1)|large_intestine(1)|lung(6)|prostate(1)|upper_aerodigestive_tract(1)	13	all_neural(118;0.0878)|Ovarian(332;0.12)		BRCA - Breast invasive adenocarcinoma(99;0.0165)|OV - Ovarian serous cystadenocarcinoma(97;0.0382)			GCTCTGCTGGCAGCCTCGGTCG	0.629													32	30	---	---	---	---					
