Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCF3	0	genome.wustl.edu	37	3	183905743	183905743	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	183905743	183905743	G	C	SNP	ABCF3	ENST00000429586	human	ensembl	69_37n	+1	known	missense	c.541	p.E181Q	1.000	pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF3	HGNC	ENSG00000161204	154	0	0.00	128	23	15.23	-	-	-
AKAP9	0	genome.wustl.edu	37	7	91729014	91729014	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	7	91729014	91729014	C	A	SNP	AKAP9	ENST00000359028	human	ensembl	69_37n	+1	known	missense	c.10739	p.S3580Y	0.012	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB-like	-	no_errors	AKAP9	HGNC	ENSG00000127914	97	0	0.00	40	20	33.33	-	-	-
ALG10B	0	genome.wustl.edu	37	12	38712083	38712083	+	Missense_Mutation	SNP	A	A	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	12	38712083	38712083	A	C	SNP	ALG10B	ENST00000548240	human	ensembl	69_37n	+1	known	missense	c.166	p.I56L	0.443	NULL	pfam_Glycosyltransferase_ALG10	-	no_errors	ALG10B	HGNC	ENSG00000175548	224	0	0.00	308	42	12.00	-	-	-
AP1S1	0	genome.wustl.edu	37	7	100802408	100802408	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	7	100802408	100802408	G	T	SNP	AP1S1	ENST00000429457	human	ensembl	69_37n	+1	putative	missense	c.485	p.G162V	0.052	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom	-	no_start_codon:pseudogene:no_stop_codon	AP1S1	HGNC	ENSG00000106367	84	0	0.00	36	24	40.00	-	-	-
AP3B1	0	genome.wustl.edu	37	5	77590365	77590365	+	Silent	SNP	T	T	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	5	77590365	77590365	T	A	SNP	AP3B1	ENST00000255194	human	ensembl	69_37n	-1	known	silent	c.39	p.G13	0.796	pirsf_AP3_complex_bsu	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_bsu	-	no_errors	AP3B1	HGNC	ENSG00000132842	72	0	0.00	37	12	24.49	-	-	-
ARID3C	0	genome.wustl.edu	37	9	34622463	34622463	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	9	34622463	34622463	C	G	SNP	ARID3C	ENST00000378909	human	ensembl	69_37n	-1	known	missense	c.929	p.R310P	0.912	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3C	HGNC	ENSG00000205143	52	0	0.00	39	9	18.00	-	-	-
ATAD5	0	genome.wustl.edu	37	17	29196617	29196617	+	Nonsense_Mutation	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	29196617	29196617	C	G	SNP	ATAD5	ENST00000321990	human	ensembl	69_37n	+1	known	nonsense	c.3560	p.S1187*	1.000	pfam_ATPase_AAA_core,smart_AAA+_ATPase	pfam_ATPase_AAA_core,smart_AAA+_ATPase	-	no_errors	ATAD5	HGNC	ENSG00000176208	167	0	0.00	121	40	24.84	-	-	-
C3orf30	0	genome.wustl.edu	37	3	118867057	118867057	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	118867057	118867057	G	T	SNP	C3orf30	ENST00000295622	human	ensembl	69_37n	+1	known	missense	c.1429	p.G477C	0.000	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C3orf30	HGNC	ENSG00000163424	130	0	0.00	165	21	11.29	-	-	-
C3orf36	0	genome.wustl.edu	37	3	133647451	133647451	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	133647451	133647451	G	C	SNP	C3orf36	ENST00000408895	human	ensembl	69_37n	-1	known	missense	c.197	p.S66C	0.004	NULL	NULL	-	no_errors	C3orf36	HGNC	ENSG00000221972	65	0	0.00	56	9	13.85	-	-	-
CACNA1F	0	genome.wustl.edu	37	X	49065105	49065105	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	X	49065105	49065105	C	T	SNP	CACNA1F	ENST00000376265	human	ensembl	69_37n	-1	known	missense	c.5026	p.G1676R	0.066	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	67	0	0.00	12	19	61.29	-	-	-
CCDC83	0	genome.wustl.edu	37	11	85623726	85623726	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	11	85623726	85623726	C	T	SNP	CCDC83	ENST00000280245	human	ensembl	69_37n	+1	known	missense	c.829	p.P277S	0.000	NULL	NULL	-	no_errors	CCDC83	HGNC	ENSG00000150676	250	0	0.00	169	54	24.11	-	-	-
CD79B	0	genome.wustl.edu	37	17	62007688	62007688	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	62007688	62007688	A	G	SNP	CD79B	ENST00000392795	human	ensembl	69_37n	-1	known	missense	c.179	p.F60S	0.000	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Phos_immunorcpt_sig_ITAM,smart_Ig_sub,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM,pfscan_Ig-like	-	no_errors	CD79B	HGNC	ENSG00000007312	55	0	0.00	62	13	17.33	-	-	-
CHD3	0	genome.wustl.edu	37	17	7800561	7800561	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	7800561	7800561	G	A	SNP	CHD3	ENST00000330494	human	ensembl	69_37n	+1	known	missense	c.1868	p.R623H	1.000	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	54	0	0.00	34	4	10.53	-	-	-
CLDN9	0	genome.wustl.edu	37	16	3063852	3063852	+	Silent	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	16	3063852	3063852	C	G	SNP	CLDN9	ENST00000445369	human	ensembl	69_37n	+1	known	silent	c.489	p.S163	0.951	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin9	-	no_errors	CLDN9	HGNC	ENSG00000213937	15	0	0.00	6	4	40.00	-	-	-
COL6A3	0	genome.wustl.edu	37	2	238245104	238245104	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	2	238245104	238245104	G	A	SNP	COL6A3	ENST00000295550	human	ensembl	69_37n	-1	known	missense	c.8639	p.T2880M	0.001	NULL	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359	265	0	0.00	205	66	24.35	-	-	-
CTNNA2	0	genome.wustl.edu	37	2	80801302	80801302	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	2	80801302	80801302	G	A	SNP	CTNNA2	ENST00000361291	human	ensembl	69_37n	+1	known	missense	c.1858	p.A620T	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	157	0	0.00	81	32	28.32	-	-	-
DENND2D	0	genome.wustl.edu	37	1	111742287	111742287	+	Silent	SNP	T	T	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	1	111742287	111742287	T	C	SNP	DENND2D	ENST00000357640	human	ensembl	69_37n	-1	known	silent	c.201	p.S67	0.000	pfam_uDENN_dom,smart_uDENN_dom,pfscan_uDENN_dom	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2D	HGNC	ENSG00000162777	62	0	0.00	41	16	28.07	-	-	-
DMRTA1	0	genome.wustl.edu	37	9	22451752	22451752	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	9	22451752	22451752	T	C	SNP	DMRTA1	ENST00000325870	human	ensembl	69_37n	+1	known	missense	c.1357	p.S453P	1.000	NULL	pfam_DM_DNA-bd,pfam_DMA,superfamily_DM_DNA-bd,superfamily_UBA-like,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRTA1	HGNC	ENSG00000176399	161	0	0.00	130	28	17.72	-	-	-
DNA2	0	genome.wustl.edu	37	10	70190364	70190364	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	10	70190364	70190364	G	A	SNP	DNA2	ENST00000440722	human	ensembl	69_37n	-1	putative	missense	c.1	p.L1F	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	DNA2	HGNC	ENSG00000138346	130	0	0.00	116	18	13.43	-	-	-
DNAH2	0	genome.wustl.edu	37	17	7708622	7708622	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	7708622	7708622	G	A	SNP	DNAH2	ENST00000389173	human	ensembl	69_37n	+1	known	missense	c.9353	p.R3118Q	1.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914	100	1	0.98	36	54	60.00	-	-	-
DYTN	0	genome.wustl.edu	37	2	207557962	207557962	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	2	207557962	207557962	G	A	SNP	DYTN	ENST00000452335	human	ensembl	69_37n	-1	known	missense	c.917	p.A306V	0.000	NULL	pfam_EF-hand_dom_typ2,pfam_EF-hand_dom_typ1,pfam_Znf_ZZ,smart_Znf_ZZ,pfscan_Znf_ZZ	-	no_errors	DYTN	HGNC	ENSG00000232125	108	0	0.00	78	22	22.00	-	-	-
ELP5	0	genome.wustl.edu	37	17	7162022	7162022	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	7162022	7162022	C	G	SNP	ELP5	ENST00000356683	human	ensembl	69_37n	+1	known	missense	c.755	p.A252G	0.000	NULL	pfam_Histone_acetylation_protein_2	-	no_errors	ELP5	HGNC	ENSG00000170291	104	0	0.00	51	51	50.00	-	-	-
ENSG00000226232	0	genome.wustl.edu	37	16	70010517	70010519	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	16	70010517	70010519	TGT	-	DEL	ENSG00000226232	ENST00000532298	human	ensembl	69_37n	-1	novel	in_frame_del	c.761_759	p.Q253in_frame_del	0.600:0.610:0.620	pfam_NPIP	pfam_NPIP	-	no_errors	RP11-419C5.2	Clone_based_vega_gene	ENSG00000226232	14	0	0.00	7	4	36.36	-	-	-
FLG	0	genome.wustl.edu	37	1	152278649	152278649	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	1	152278649	152278649	C	G	SNP	FLG	ENST00000368799	human	ensembl	69_37n	-1	known	missense	c.8713	p.E2905Q	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	304	1	0.33	333	92	21.65	-	-	-
FNDC7	0	genome.wustl.edu	37	1	109273351	109273351	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	1	109273351	109273351	C	G	SNP	FNDC7	ENST00000271311	human	ensembl	69_37n	+1	known	missense	c.1683	p.N561K	0.996	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC7	HGNC	ENSG00000143107	127	0	0.00	108	18	14.29	-	-	-
GLT8D1	0	genome.wustl.edu	37	3	52729961	52729961	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	52729961	52729961	G	A	SNP	GLT8D1	ENST00000266014	human	ensembl	69_37n	-1	known	missense	c.628	p.R210C	1.000	pfam_Glyco_trans_8	pfam_Glyco_trans_8	-	no_errors	GLT8D1	HGNC	ENSG00000016864	110	0	0.00	94	21	18.26	-	-	-
GNL3	0	genome.wustl.edu	37	3	52726938	52726938	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	52726938	52726938	C	T	SNP	GNL3	ENST00000418458	human	ensembl	69_37n	+1	known	missense	c.920	p.P307L	1.000	pfam_GTP_binding_domain	pfam_Gnl3_N_dom,pfam_GTP_binding_domain	-	no_errors	GNL3	HGNC	ENSG00000163938	93	0	0.00	72	24	25.00	-	-	-
GRAMD1B	0	genome.wustl.edu	37	11	123479407	123479407	+	Silent	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	11	123479407	123479407	G	A	SNP	GRAMD1B	ENST00000322282	human	ensembl	69_37n	+1	known	silent	c.1125	p.Q375	1.000	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD1B	HGNC	ENSG00000023171	86	0	0.00	14	28	66.67	-	-	-
HECTD1	0	genome.wustl.edu	37	14	31675003	31675003	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	14	31675003	31675003	G	C	SNP	HECTD1	ENST00000399332	human	ensembl	69_37n	-1	known	missense	c.140	p.T47R	1.000	superfamily_ARM-type_fold	pfam_HECT,pfam_Sad1_UNC_C,pfam_Mib_Herc2,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,superfamily_Galactose-bd-like,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT	-	no_errors	HECTD1	HGNC	ENSG00000092148	116	0	0.00	59	31	34.07	-	-	-
HIST1H4L	0	genome.wustl.edu	37	6	27841182	27841182	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	6	27841182	27841182	C	T	SNP	HIST1H4L	ENST00000355981	human	ensembl	69_37n	-1	known	missense	c.107	p.R36Q	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4L	HGNC	ENSG00000198558	66	0	0.00	71	15	17.44	-	-	-
HIVEP3	0	genome.wustl.edu	37	1	42048715	42048715	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	1	42048715	42048715	C	T	SNP	HIVEP3	ENST00000247584	human	ensembl	69_37n	-1	known	missense	c.1754	p.R585Q	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124	45	0	0.00	285	83	22.49	-	-	-
HN1	0	genome.wustl.edu	37	17	73132265	73132265	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	73132265	73132265	C	A	SNP	HN1	ENST00000409753	human	ensembl	69_37n	-1	known	missense	c.397	p.V133L	0.987	NULL	NULL	-	no_errors	HN1	HGNC	ENSG00000189159	21	0	0.00	26	7	21.21	-	-	-
HPGDS	0	genome.wustl.edu	37	4	95223325	95223325	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	4	95223325	95223325	C	A	SNP	HPGDS	ENST00000295256	human	ensembl	69_37n	-1	known	missense	c.407	p.G136V	0.723	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold	-	no_errors	HPGDS	HGNC	ENSG00000163106	145	0	0.00	102	66	39.29	-	-	-
IGSF22	0	genome.wustl.edu	37	11	18733928	18733928	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	11	18733928	18733928	C	T	SNP	IGSF22	ENST00000513874	human	ensembl	69_37n	-1	known	missense	c.2099	p.R700H	0.591	superfamily_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	IGSF22	HGNC	ENSG00000179057	74	0	0.00	46	11	19.30	-	-	-
KCND2	0	genome.wustl.edu	37	7	119915032	119915032	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	7	119915032	119915032	G	A	SNP	KCND2	ENST00000331113	human	ensembl	69_37n	+1	known	missense	c.346	p.D116N	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv3	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.2,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND2	HGNC	ENSG00000184408	36	0	0.00	22	5	17.86	-	-	-
KIAA0368	0	genome.wustl.edu	37	9	114156470	114156470	+	Silent	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	9	114156470	114156470	G	A	SNP	KIAA0368	ENST00000259335	human	ensembl	69_37n	-1	known	silent	c.3426	p.V1142	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA0368	HGNC	ENSG00000136813	142	0	0.00	62	45	42.06	-	-	-
KIF1B	0	genome.wustl.edu	37	1	10355754	10355754	+	Silent	SNP	A	A	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	1	10355754	10355754	A	T	SNP	KIF1B	ENST00000263934	human	ensembl	69_37n	+1	known	silent	c.1569	p.I523	0.989	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523	75	0	0.00	37	9	19.57	-	-	-
MYH15	0	genome.wustl.edu	37	3	108220616	108220616	+	Silent	SNP	G	G	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	108220616	108220616	G	C	SNP	MYH15	ENST00000273353	human	ensembl	69_37n	-1	known	silent	c.342	p.L114	0.997	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821	94	0	0.00	96	19	16.52	-	-	-
NLRC4	0	genome.wustl.edu	37	2	32476335	32476335	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	2	32476335	32476335	C	A	SNP	NLRC4	ENST00000360906	human	ensembl	69_37n	-1	known	missense	c.598	p.V200F	0.982	pfscan_NACHT_NTPase	pfam_CARD,superfamily_DEATH-like,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NLRC4	HGNC	ENSG00000091106	94	0	0.00	61	10	14.08	-	-	-
NMT2	0	genome.wustl.edu	37	10	15151734	15151734	+	Nonsense_Mutation	SNP	G	G	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	10	15151734	15151734	G	T	SNP	NMT2	ENST00000378143	human	ensembl	69_37n	-1	known	nonsense	c.1536	p.Y512*	1.000	pfam_MyristoylCoA_TrFase_C,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	pfam_MyristoylCoA_TrFase_C,pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	-	no_errors	NMT2	HGNC	ENSG00000152465	153	0	0.00	95	40	29.41	-	-	-
NSUN7	0	genome.wustl.edu	37	4	40810797	40810797	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	4	40810797	40810797	C	G	SNP	NSUN7	ENST00000381782	human	ensembl	69_37n	+1	known	missense	c.1998	p.I666M	0.023	NULL	pfam_Fmu/NOL1/Nop2p	-	no_errors	NSUN7	HGNC	ENSG00000179299	111	0	0.00	75	23	23.47	-	-	-
NUP62	0	genome.wustl.edu	37	19	50411501	50411501	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	19	50411501	50411501	C	G	SNP	NUP62	ENST00000352066	human	ensembl	69_37n	-1	known	missense	c.1564	p.D522H	0.991	NULL	pfam_Nucleoporin_NSP1_C	-	no_errors	NUP62	HGNC	ENSG00000213024	37	0	0.00	18	9	33.33	-	-	-
OR5T3	0	genome.wustl.edu	37	11	56019960	56019960	+	Silent	SNP	T	T	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	11	56019960	56019960	T	C	SNP	OR5T3	ENST00000303059	human	ensembl	69_37n	+1	known	silent	c.285	p.V95	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR5T3	HGNC	ENSG00000172489	161	0	0.00	147	44	23.04	-	-	-
OR6K2	0	genome.wustl.edu	37	1	158669827	158669827	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	1	158669827	158669827	C	A	SNP	OR6K2	ENST00000359610	human	ensembl	69_37n	-1	known	missense	c.616	p.V206L	0.551	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR6K2	HGNC	ENSG00000196171	87	0	0.00	85	30	26.09	-	-	-
PCDHA12	0	genome.wustl.edu	37	5	140256728	140256728	+	Silent	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	5	140256728	140256728	C	T	SNP	PCDHA12	ENST00000398631	human	ensembl	69_37n	+1	known	silent	c.1671	p.D557	0.527	superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	43	0	0.00	26	6	18.75	-	-	-
PEX6	0	genome.wustl.edu	37	6	42934186	42934186	+	Splice_Site	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	6	42934186	42934186	C	T	SNP	PEX6	ENST00000304611	human	ensembl	69_37n	-1	known	splice_site	c.2095-1	e11-1	1.000	-	-	-	no_errors	PEX6	HGNC	ENSG00000124587	45	0	0.00	46	9	16.36	-	-	-
PLCL2	0	genome.wustl.edu	37	3	17051565	17051565	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	17051565	17051565	G	C	SNP	PLCL2	ENST00000418129	human	ensembl	69_37n	+1	known	missense	c.349	p.V117L	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL2	HGNC	ENSG00000154822	96	0	0.00	66	11	14.29	-	-	-
POU6F1	0	genome.wustl.edu	37	12	51584232	51584232	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	12	51584232	51584232	C	T	SNP	POU6F1	ENST00000333640	human	ensembl	69_37n	-1	known	missense	c.704	p.R235H	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_POU,pfscan_Homeodomain	pfam_POU_specific,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeodomain,prints_POU,pfscan_Homeodomain,pfscan_POU_specific	-	no_errors	POU6F1	HGNC	ENSG00000184271	64	0	0.00	34	15	30.61	-	-	-
PRKG2	0	genome.wustl.edu	37	4	82092953	82092953	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	4	82092953	82092953	G	A	SNP	PRKG2	ENST00000264399	human	ensembl	69_37n	-1	known	nonsense	c.634	p.R212*	0.009	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	pfam_Prot_kinase_cat_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_cat_dom,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin	-	no_errors	PRKG2	HGNC	ENSG00000138669	134	1	0.74	93	41	30.60	-	-	-
PSTPIP1	0	genome.wustl.edu	37	15	77310845	77310845	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	15	77310845	77310845	G	A	SNP	PSTPIP1	ENST00000559785	human	ensembl	69_37n	+1	known	missense	c.380	p.R127Q	1.000	pfam_FCH,superfamily_Prismane-like,smart_FCH,pfscan_FCH	pfam_FCH,superfamily_Prismane-like,smart_FCH,pfscan_FCH	-	no_errors	PSTPIP1	HGNC	ENSG00000140368	70	0	0.00	35	10	22.22	-	-	-
SCN11A	0	genome.wustl.edu	37	3	38924780	38924780	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	38924780	38924780	G	T	SNP	SCN11A	ENST00000302328	human	ensembl	69_37n	-1	known	missense	c.3163	p.H1055N	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	90	0	0.00	76	22	22.45	-	-	-
SDAD1	0	genome.wustl.edu	37	4	76891502	76891502	+	Silent	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	4	76891502	76891502	C	G	SNP	SDAD1	ENST00000356260	human	ensembl	69_37n	-1	known	silent	c.843	p.V281	1.000	superfamily_ARM-type_fold	pfam_SDA1,pfam_Uncharacterised_NUC130/133_N,superfamily_ARM-type_fold	-	no_errors	SDAD1	HGNC	ENSG00000198301	125	0	0.00	96	47	32.87	-	-	-
SDHD	0	genome.wustl.edu	37	11	111958687	111958687	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	11	111958687	111958687	G	A	SNP	SDHD	ENST00000530923	human	ensembl	69_37n	+1	known	missense	c.149	p.R50Q	0.071	pfam_Cyt_b_succ_DH_CybS	pfam_Cyt_b_succ_DH_CybS	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SDHD	HGNC	ENSG00000204370	113	0	0.00	46	30	39.47	-	-	-
SH3BGR	0	genome.wustl.edu	37	21	40834367	40834367	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	21	40834367	40834367	G	A	SNP	SH3BGR	ENST00000333634	human	ensembl	69_37n	+1	known	missense	c.301	p.D101N	1.000	pfam_Glut_rich_SH3-bd,superfamily_Thioredoxin-like_fold	pfam_Glut_rich_SH3-bd,superfamily_Thioredoxin-like_fold	-	no_errors	SH3BGR	HGNC	ENSG00000185437	172	0	0.00	291	50	14.62	-	-	-
SHMT1	0	genome.wustl.edu	37	17	18232668	18232668	+	Silent	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	18232668	18232668	C	G	SNP	SHMT1	ENST00000316694	human	ensembl	69_37n	-1	known	silent	c.1206	p.R402	0.466	pfam_Ser_HO-MeTrfase,pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom,pirsf_Ser_HO-MeTrfase	pfam_Ser_HO-MeTrfase,pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom,pirsf_Ser_HO-MeTrfase	-	no_errors	SHMT1	HGNC	ENSG00000176974	57	0	0.00	59	8	11.94	-	-	-
SRBD1	0	genome.wustl.edu	37	2	45774701	45774701	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	2	45774701	45774701	G	-	DEL	SRBD1	ENST00000263736	human	ensembl	69_37n	-1	known	frame_shift_del	c.1726	p.R576fs	1.000	smart_YqgF/RNaseH-like_dom	pfam_Tex-like_N,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_NA-bd_OB-fold-like,superfamily_RuvA_2-like,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SRBD1	HGNC	ENSG00000068784	133	0	0.00	118	29	19.59	-	-	-
SRBD1	0	genome.wustl.edu	37	2	45774705	45774705	+	Silent	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	2	45774705	45774705	G	A	SNP	SRBD1	ENST00000263736	human	ensembl	69_37n	-1	known	silent	c.1722	p.G574	0.985	smart_YqgF/RNaseH-like_dom	pfam_Tex-like_N,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_NA-bd_OB-fold-like,superfamily_RuvA_2-like,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SRBD1	HGNC	ENSG00000068784	135	0	0.00	121	33	21.29	-	-	-
SVIL	0	genome.wustl.edu	37	10	29813436	29813436	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	10	29813436	29813436	G	A	SNP	SVIL	ENST00000355867	human	ensembl	69_37n	-1	known	nonsense	c.2551	p.Q851*	1.000	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321	231	0	0.00	142	98	40.66	-	-	-
SYCE1L	0	genome.wustl.edu	37	16	77240349	77240349	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	16	77240349	77240349	T	A	SNP	SYCE1L	ENST00000378644	human	ensembl	69_37n	+1	known	missense	c.73	p.S25T	0.002	NULL	NULL	-	no_errors	SYCE1L	HGNC	ENSG00000205078	115	0	0.00	61	19	23.46	-	-	-
SYNGAP1	0	genome.wustl.edu	37	6	33410890	33410890	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	6	33410890	33410890	G	A	SNP	SYNGAP1	ENST00000418600	human	ensembl	69_37n	+1	known	missense	c.2561	p.R854H	1.000	pfam_DUF3498	pfam_DUF3498,pfam_RasGAP,pfam_C2_Ca-dep,superfamily_Rho_GTPase_activation_prot,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_C2_Ca-dep,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	SYNGAP1	HGNC	ENSG00000197283	36	0	0.00	30	6	16.67	-	-	-
TAOK1	0	genome.wustl.edu	37	17	27825439	27825439	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	27825439	27825439	T	G	SNP	TAOK1	ENST00000261716	human	ensembl	69_37n	+1	known	missense	c.1103	p.V368G	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Homeodomain-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	TAOK1	HGNC	ENSG00000160551	65	0	0.00	38	26	40.62	-	-	-
TASP1	0	genome.wustl.edu	37	20	13610600	13610601	+	In_Frame_Ins	INS	-	-	CCT			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	20	13610600	13610601	-	CCT	INS	TASP1	ENST00000337743	human	ensembl	69_37n	-1	known	in_frame_ins	c.126_125	p.43in_frame_insG	1.000:1.000	NULL	pfam_Peptidase_T2	-	no_errors	TASP1	HGNC	ENSG00000089123	173	0	0.00	126	21	14.29	-	-	-
TNRC18	0	genome.wustl.edu	37	7	5396789	5396789	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	7	5396789	5396789	C	G	SNP	TNRC18	ENST00000399537	human	ensembl	69_37n	-1	known	missense	c.4952	p.S1651T	0.056	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095	84	0	0.00	51	14	21.54	-	-	-
TP53	0	genome.wustl.edu	37	17	7574030	7574030	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	17	7574030	7574030	G	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_del	c.997	p.R333fs	0.645	pfam_p53_tetrameristn,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	43	0	0.00	16	20	55.56	-	-	-
TRA2B	0	genome.wustl.edu	37	3	185644497	185644497	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	3	185644497	185644497	C	T	SNP	TRA2B	ENST00000453386	human	ensembl	69_37n	-1	known	missense	c.62	p.G21E	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TRA2B	HGNC	ENSG00000136527	65	0	0.00	98	15	13.27	-	-	-
TUBA3D	0	genome.wustl.edu	37	2	132237879	132237879	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	2	132237879	132237879	G	A	SNP	TUBA3D	ENST00000321253	human	ensembl	69_37n	+1	known	missense	c.613	p.D205N	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3D	HGNC	ENSG00000075886	236	1	0.42	204	45	18.07	-	-	-
TYR	0	genome.wustl.edu	37	11	88911667	88911667	+	Silent	SNP	T	T	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	11	88911667	88911667	T	C	SNP	TYR	ENST00000263321	human	ensembl	69_37n	+1	known	silent	c.546	p.Y182	1.000	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498	94	0	0.00	70	21	23.08	-	-	-
UNC13A	0	genome.wustl.edu	37	19	17756618	17756618	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	19	17756618	17756618	G	A	SNP	UNC13A	ENST00000428389	human	ensembl	69_37n	-1	known	missense	c.2485	p.R829C	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting,prints_C2_dom	pfam_Munc13_subgr_dom-2,pfam_C2_Ca-dep,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477	100	1	0.99	45	36	44.44	-	-	-
WDR46	0	genome.wustl.edu	37	6	33248585	33248585	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	6	33248585	33248585	G	A	SNP	WDR46	ENST00000374617	human	ensembl	69_37n	-1	known	missense	c.1295	p.A432V	0.983	superfamily_WD40_repeat_dom	pfam_BING4_C_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR46	HGNC	ENSG00000227057	50	0	0.00	53	12	18.18	-	-	-
WDR65	0	genome.wustl.edu	37	1	43672428	43672428	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	1	43672428	43672428	T	C	SNP	WDR65	ENST00000528956	human	ensembl	69_37n	+1	known	missense	c.1580	p.L527P	1.000	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR65	HGNC	ENSG00000243710	121	0	0.00	117	283	70.75	-	-	-
ZNF687	0	genome.wustl.edu	37	1	151261988	151261988	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0YM-01A-11D-A10G-09	TCGA-A2-A0YM-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1125ec93-6d24-4537-9c89-526f2d6b2299	1b5a4092-b33a-442c-808c-abbaf60d033c	1	151261988	151261988	A	G	SNP	ZNF687	ENST00000324048	human	ensembl	69_37n	+1	known	missense	c.2606	p.Q869R	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373	86	0	0.00	125	15	10.64	-	-	-
