Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABLIM2	0	genome.wustl.edu	37	4	8034384	8034384	+	Silent	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	4	8034384	8034384	C	T	SNP	ABLIM2	ENST00000361737	human	ensembl	69_37n	-1	known	silent	c.1071	p.T357	0.929	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM2	HGNC	ENSG00000163995	60	0	0.00	21	33	61.11	-	-	-
ACOXL	0	genome.wustl.edu	37	2	111559229	111559229	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	2	111559229	111559229	G	A	SNP	ACOXL	ENST00000439055	human	ensembl	69_37n	+1	known	missense	c.548	p.G183D	0.930	superfamily_AcylCoA_DH/oxidase,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_Oxase/DH_1,superfamily_AcylCoA_DH/oxidase,superfamily_AcylCo_DH/oxidase_C,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOXL	HGNC	ENSG00000153093	111	0	0.00	86	30	25.86	-	-	-
ADARB2	0	genome.wustl.edu	37	10	1246063	1246063	+	Silent	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	10	1246063	1246063	G	A	SNP	ADARB2	ENST00000381312	human	ensembl	69_37n	-1	known	silent	c.1707	p.G569	0.002	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_Ds-RNA-bd,smart_Ds-RNA-bd,smart_A_deamin,pfscan_Ds-RNA-bd,pfscan_A_deamin	-	no_errors	ADARB2	HGNC	ENSG00000185736	63	0	0.00	70	30	30.00	-	-	-
AMMECR1L	0	genome.wustl.edu	37	2	128622763	128622763	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	2	128622763	128622763	C	T	SNP	AMMECR1L	ENST00000272647	human	ensembl	69_37n	-1	known	missense	c.838	p.V280M	1.000	pfam_AMMECR1_domain,pfscan_AMMECR1_domain	pfam_AMMECR1_domain,pfscan_AMMECR1_domain,tigrfam_AMMECR1	-	no_errors	AMMECR1L	HGNC	ENSG00000144233	36	0	0.00	38	8	17.39	-	-	-
ARHGAP40	0	genome.wustl.edu	37	20	37258255	37258255	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	20	37258255	37258255	C	T	SNP	ARHGAP40	ENST00000373345	human	ensembl	69_37n	+1	known	missense	c.586	p.R196W	0.001	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP40	HGNC	ENSG00000124143	35	0	0.00	32	9	21.95	-	-	-
ARHGEF26	0	genome.wustl.edu	37	3	153943664	153943664	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	3	153943664	153943664	C	T	SNP	ARHGEF26	ENST00000356448	human	ensembl	69_37n	+1	known	missense	c.1955	p.S652F	1.000	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF26	HGNC	ENSG00000114790	64	0	0.00	106	15	12.40	-	-	-
BAP1	0	genome.wustl.edu	37	3	52440864	52440865	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	3	52440864	52440865	-	A	INS	BAP1	ENST00000460680	human	ensembl	69_37n	-1	known	frame_shift_ins	c.640_639	p.I213fs	1.000:0.846	pfam_Peptidase_C12	pfam_Peptidase_C12,prints_Peptidase_C12	-	no_errors	BAP1	HGNC	ENSG00000163930	57	0	0.00	7	30	81.08	-	-	-
BNC2	0	genome.wustl.edu	37	9	16431421	16431421	+	Silent	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	9	16431421	16431421	G	A	SNP	BNC2	ENST00000411752	human	ensembl	69_37n	-1	known	silent	c.945	p.S315	0.000	NULL	pfscan_Znf_C2H2	-	no_start_codon	BNC2	HGNC	ENSG00000173068	51	0	0.00	92	25	21.37	-	-	-
CACNA1E	0	genome.wustl.edu	37	1	181689359	181689359	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	1	181689359	181689359	G	A	SNP	CACNA1E	ENST00000367573	human	ensembl	69_37n	+1	known	missense	c.1769	p.R590Q	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_HAND_2,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	53	0	0.00	88	35	28.23	-	-	-
CARD9	0	genome.wustl.edu	37	9	139258462	139258462	+	RNA	SNP	A	A	G			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	9	139258462	139258462	A	G	SNP	CARD9	ENST00000460290	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CARD9	HGNC	ENSG00000187796	20	0	0.00	22	5	18.52	-	-	-
CES1P1	0	genome.wustl.edu	37	16	55794533	55794533	+	RNA	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	16	55794533	55794533	C	T	SNP	CES1P1	ENST00000571348	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CES1P1	HGNC	ENSG00000228695	99	0	0.00	49	27	35.53	-	-	-
CGB1	0	genome.wustl.edu	37	19	49538955	49538955	+	Missense_Mutation	SNP	G	G	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	19	49538955	49538955	G	T	SNP	CGB1	ENST00000301407	human	ensembl	69_37n	-1	known	missense	c.380	p.T127N	0.977	pfam_Cys_knot,smart_Gonadotropin_bsu	pfam_Cys_knot,smart_Gonadotropin_bsu	-	no_errors	CGB1	HGNC	ENSG00000267631	83	0	0.00	77	24	23.76	-	-	-
CHST9-AS1	0	genome.wustl.edu	37	18	24510658	24510658	+	RNA	SNP	T	T	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	18	24510658	24510658	T	A	SNP	CHST9-AS1	ENST00000568797	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CHST9-AS1	HGNC	ENSG00000260372	46	0	0.00	32	5	13.51	-	-	-
CLCN7	0	genome.wustl.edu	37	16	1511617	1511617	+	Missense_Mutation	SNP	G	G	C			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	16	1511617	1511617	G	C	SNP	CLCN7	ENST00000382745	human	ensembl	69_37n	-1	known	missense	c.272	p.S91C	1.000	prints_Cl_channel-7	pfam_Cl-channel_volt-gated,pfam_Cysta_beta_synth_core,superfamily_Cl-channel_core,smart_Cysta_beta_synth_core,prints_Cl-channel_volt-gated,prints_Cl_channel-7	-	no_errors	CLCN7	HGNC	ENSG00000103249	54	0	0.00	55	22	28.57	-	-	-
CNIH2	0	genome.wustl.edu	37	11	66045953	66045953	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	11	66045953	66045953	G	A	SNP	CNIH2	ENST00000311445	human	ensembl	69_37n	+1	known	missense	c.26	p.C9Y	1.000	pfam_Cornichon	pfam_Cornichon	-	no_errors	CNIH2	HGNC	ENSG00000174871	8	0	0.00	18	11	37.93	-	-	-
CPSF1	0	genome.wustl.edu	37	8	145626185	145626185	+	Missense_Mutation	SNP	T	T	C			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	8	145626185	145626185	T	C	SNP	CPSF1	ENST00000349769	human	ensembl	69_37n	-1	known	missense	c.566	p.Y189C	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894	56	0	0.00	43	38	46.91	-	-	-
DIP2A	0	genome.wustl.edu	37	21	47983837	47983837	+	Silent	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	21	47983837	47983837	C	T	SNP	DIP2A	ENST00000318711	human	ensembl	69_37n	+1	known	silent	c.4159	p.L1387	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305	34	0	0.00	30	19	38.78	-	-	-
DMD	0	genome.wustl.edu	37	X	31279129	31279129	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	X	31279129	31279129	C	T	SNP	DMD	ENST00000357033	human	ensembl	69_37n	-1	known	missense	c.9229	p.E3077K	1.000	pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,pirsf_Dystrophin/utrophin,pfscan_WW_Rsp5_WWP	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	38	0	0.00	25	17	40.48	-	-	-
FAM75A6	0	genome.wustl.edu	37	9	43628235	43628235	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	9	43628235	43628235	G	A	SNP	FAM75A6	ENST00000332857	human	ensembl	69_37n	-1	known	missense	c.452	p.P151L	0.000	NULL	NULL	-	no_errors	FAM75A6	HGNC	ENSG00000185775	9	0	0.00	10	6	37.50	-	-	-
FBLN1	0	genome.wustl.edu	37	22	45958895	45958895	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	22	45958895	45958895	G	A	SNP	FBLN1	ENST00000262722	human	ensembl	69_37n	+1	known	missense	c.1801	p.A601T	1.000	pirsf_Fibulin-1	pfam_EGF-like_Ca-bd,pfam_Anaphylatoxin/fibulin,smart_Anaphylatoxin/fibulin,smart_EGF-like,smart_EGF-like_Ca-bd,pirsf_Fibulin-1,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN1	HGNC	ENSG00000077942	55	0	0.00	44	23	34.33	-	-	-
FBXL19	0	genome.wustl.edu	37	16	30939090	30939090	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	16	30939090	30939090	C	T	SNP	FBXL19	ENST00000380310	human	ensembl	69_37n	+1	known	missense	c.493	p.R165C	1.000	NULL	pfam_Znf_CXXC,pfam_F-box_dom_cyclin-like,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_F-box_dom_cyclin-like,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	FBXL19	HGNC	ENSG00000099364	127	0	0.00	144	35	19.55	-	-	-
FOXL2	0	genome.wustl.edu	37	3	138665358	138665358	+	Missense_Mutation	SNP	C	C	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	3	138665358	138665358	C	A	SNP	FOXL2	ENST00000330315	human	ensembl	69_37n	-1	known	missense	c.207	p.E69D	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXL2	HGNC	ENSG00000183770	27	0	0.00	63	10	13.70	-	-	-
GGN	0	genome.wustl.edu	37	19	38876632	38876632	+	Missense_Mutation	SNP	C	C	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	19	38876632	38876632	C	A	SNP	GGN	ENST00000334928	human	ensembl	69_37n	-1	known	missense	c.1270	p.G424C	0.855	NULL	NULL	-	no_errors	GGN	HGNC	ENSG00000179168	18	0	0.00	7	20	74.07	-	-	-
GIGYF1	0	genome.wustl.edu	37	7	100284299	100284299	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	7	100284299	100284299	C	T	SNP	GIGYF1	ENST00000275732	human	ensembl	69_37n	-1	known	missense	c.667	p.G223S	0.994	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830	49	0	0.00	36	10	21.74	-	-	-
HHIPL1	0	genome.wustl.edu	37	14	100118715	100118715	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	14	100118715	100118715	C	T	SNP	HHIPL1	ENST00000330710	human	ensembl	69_37n	+1	known	missense	c.410	p.A137V	0.903	pfam_Folate_rcpt-like	pfam_Srcr_rcpt,pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Srcr_rcpt-rel,superfamily_Quinoprot_gluc/sorb_DH,smart_Srcr_rcpt-rel,prints_Srcr_rcpt,pfscan_Srcr_rcpt	-	no_errors	HHIPL1	HGNC	ENSG00000182218	26	0	0.00	18	16	47.06	-	-	-
HIST1H3B	0	genome.wustl.edu	37	6	26032052	26032052	+	Missense_Mutation	SNP	G	G	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	6	26032052	26032052	G	T	SNP	HIST1H3B	ENST00000244661	human	ensembl	69_37n	-1	known	missense	c.237	p.F79L	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3B	HGNC	ENSG00000124693	79	0	0.00	133	46	25.70	-	-	-
HTR2C	0	genome.wustl.edu	37	X	114141231	114141231	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	X	114141231	114141231	C	T	SNP	HTR2C	ENST00000371950	human	ensembl	69_37n	+1	known	nonsense	c.535	p.R179*	0.946	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_5HT2C_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	HTR2C	HGNC	ENSG00000147246	103	0	0.00	125	79	38.54	-	-	-
ITGA1	0	genome.wustl.edu	37	5	52227951	52227951	+	Missense_Mutation	SNP	G	G	C			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	5	52227951	52227951	G	C	SNP	ITGA1	ENST00000282588	human	ensembl	69_37n	+1	known	missense	c.2846	p.G949A	0.863	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA1	HGNC	ENSG00000213949	59	0	0.00	38	20	34.48	-	-	-
KIAA1328	0	genome.wustl.edu	37	18	34647216	34647216	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	18	34647216	34647216	C	T	SNP	KIAA1328	ENST00000280020	human	ensembl	69_37n	+1	known	missense	c.940	p.R314C	0.290	NULL	NULL	-	no_errors	KIAA1328	HGNC	ENSG00000150477	62	0	0.00	41	14	25.45	-	-	-
LILRA5	0	genome.wustl.edu	37	19	54823368	54823368	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	19	54823368	54823368	G	A	SNP	LILRA5	ENST00000301219	human	ensembl	69_37n	-1	known	missense	c.175	p.R59W	0.000	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2	-	no_errors	LILRA5	HGNC	ENSG00000187116	45	0	0.00	32	12	27.27	-	-	-
LINC00200	0	genome.wustl.edu	37	10	1208631	1208631	+	RNA	SNP	A	A	G			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	10	1208631	1208631	A	G	SNP	LINC00200	ENST00000425630	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00200	HGNC	ENSG00000229205	8	0	0.00	13	13	50.00	-	-	-
LTK	0	genome.wustl.edu	37	15	41797455	41797455	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	15	41797455	41797455	C	T	SNP	LTK	ENST00000263800	human	ensembl	69_37n	-1	known	missense	c.1876	p.D626N	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LTK	HGNC	ENSG00000062524	37	0	0.00	34	13	27.66	-	-	-
LUZP2	0	genome.wustl.edu	37	11	24759771	24759771	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	11	24759771	24759771	G	T	SNP	LUZP2	ENST00000336930	human	ensembl	69_37n	+1	known	nonsense	c.256	p.E86*	1.000	NULL	NULL	-	no_errors	LUZP2	HGNC	ENSG00000187398	60	0	0.00	38	16	29.63	-	-	-
MAEL	0	genome.wustl.edu	37	1	166959030	166959030	+	Silent	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	1	166959030	166959030	C	T	SNP	MAEL	ENST00000367872	human	ensembl	69_37n	+1	known	silent	c.189	p.A63	0.934	pfam_HMG_superfamily,superfamily_HMG_superfamily	pfam_HMG_superfamily,superfamily_HMG_superfamily,superfamily_CH-domain	-	no_errors	MAEL	HGNC	ENSG00000143194	42	0	0.00	52	9	14.75	-	-	-
MAN1B1	0	genome.wustl.edu	37	9	139998223	139998223	+	RNA	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	9	139998223	139998223	C	T	SNP	MAN1B1	ENST00000540391	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.521	-	-	-	no_errors	MAN1B1	HGNC	ENSG00000177239	151	1	0.66	158	26	14.13	-	-	-
MAVS	0	genome.wustl.edu	37	20	3846631	3846631	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	20	3846631	3846631	C	T	SNP	MAVS	ENST00000428216	human	ensembl	69_37n	+1	known	missense	c.1460	p.A487V	0.000	NULL	NULL	-	no_errors	MAVS	HGNC	ENSG00000088888	34	0	0.00	17	7	29.17	-	-	-
MCF2L2	0	genome.wustl.edu	37	3	182947467	182947467	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	3	182947467	182947467	C	T	SNP	MCF2L2	ENST00000328913	human	ensembl	69_37n	-1	known	missense	c.2032	p.E678K	0.998	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2L2	HGNC	ENSG00000053524	19	0	0.00	28	5	15.15	-	-	-
MCU	0	genome.wustl.edu	37	10	74451957	74451958	+	In_Frame_Ins	INS	-	-	GGC			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	10	74451957	74451958	-	GGC	INS	MCU	ENST00000373053	human	ensembl	69_37n	+1	known	in_frame_ins	c.48_49	p.20in_frame_insG	1.000:0.997	NULL	pfam_Coiled-coil-dom_prot_109_C	-	no_errors	MCU	HGNC	ENSG00000156026	8	0	0.00	11	6	35.29	-	-	-
MLLT4	0	genome.wustl.edu	37	6	168363149	168363149	+	Missense_Mutation	SNP	G	G	C			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	6	168363149	168363149	G	C	SNP	MLLT4	ENST00000366806	human	ensembl	69_37n	+1	known	missense	c.4849	p.E1617Q	1.000	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396	79	0	0.00	93	13	12.26	-	-	-
MOSPD1	0	genome.wustl.edu	37	X	134033520	134033520	+	RNA	SNP	G	G	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	X	134033520	134033520	G	T	SNP	MOSPD1	ENST00000462060	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.726	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928	64	0	0.00	77	13	14.44	-	-	-
MSX2	0	genome.wustl.edu	37	5	174156477	174156477	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	5	174156477	174156477	C	T	SNP	MSX2	ENST00000239243	human	ensembl	69_37n	+1	known	missense	c.695	p.A232V	0.996	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	MSX2	HGNC	ENSG00000120149	65	0	0.00	26	22	45.83	-	-	-
MUS81	0	genome.wustl.edu	37	11	65633368	65633368	+	Silent	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	11	65633368	65633368	G	A	SNP	MUS81	ENST00000529742	human	ensembl	69_37n	+1	putative	silent	c.191	p.*64	1.000	NULL	NULL	-	no_start_codon	MUS81	HGNC	ENSG00000172732	66	0	0.00	46	16	25.40	-	-	-
NBPF1	0	genome.wustl.edu	37	1	16901044	16901044	+	RNA	SNP	T	T	G			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	1	16901044	16901044	T	G	SNP	NBPF1	ENST00000287968	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NBPF1	HGNC	ENSG00000219481	237	0	0.00	144	20	12.05	-	-	-
NLRX1	0	genome.wustl.edu	37	11	119043620	119043620	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	11	119043620	119043620	C	T	SNP	NLRX1	ENST00000292199	human	ensembl	69_37n	+1	known	missense	c.151	p.R51C	0.061	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRX1	HGNC	ENSG00000160703	32	0	0.00	26	9	25.71	-	-	-
NTN5	0	genome.wustl.edu	37	19	49164994	49164996	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	19	49164994	49164996	CTC	-	DEL	NTN5	ENST00000270235	human	ensembl	69_37n	-1	known	in_frame_del	c.1410_1408	p.E470in_frame_del	0.961:1.000:1.000	superfamily_TIMP-like_OB-fold,pfscan_Netrin_domain	pfam_Netrin_module_non-TIMP,pfam_EGF_laminin,superfamily_TIMP-like_OB-fold,smart_EGF_laminin,smart_Netrin_module_non-TIMP,pfscan_EGF_laminin,pfscan_Netrin_domain	-	no_errors	NTN5	HGNC	ENSG00000142233	9	0	0.00	2	4	66.67	-	-	-
OAS2	0	genome.wustl.edu	37	12	113425098	113425098	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	12	113425098	113425098	G	A	SNP	OAS2	ENST00000342315	human	ensembl	69_37n	+1	known	missense	c.433	p.A145T	0.871	NULL	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS2	HGNC	ENSG00000111335	23	0	0.00	21	5	19.23	-	-	-
ODZ3	0	genome.wustl.edu	37	4	183720880	183720880	+	Silent	SNP	C	C	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	4	183720880	183720880	C	A	SNP	ODZ3	ENST00000406950	human	ensembl	69_37n	+1	known	silent	c.7476	p.V2492	0.997	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c_dom,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ3	HGNC	ENSG00000218336	26	0	0.00	16	6	27.27	-	-	-
OGFRL1	0	genome.wustl.edu	37	6	72011241	72011241	+	Missense_Mutation	SNP	A	A	G			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	6	72011241	72011241	A	G	SNP	OGFRL1	ENST00000370435	human	ensembl	69_37n	+1	known	missense	c.845	p.Y282C	1.000	pfam_OGF_rcpt	pfam_OGF_rcpt	-	no_errors	OGFRL1	HGNC	ENSG00000119900	58	0	0.00	84	14	14.29	-	-	-
OR2Y1	0	genome.wustl.edu	37	5	180166345	180166345	+	Silent	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	5	180166345	180166345	C	T	SNP	OR2Y1	ENST00000307832	human	ensembl	69_37n	-1	known	silent	c.714	p.G238	0.039	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2Y1	HGNC	ENSG00000174339	25	0	0.00	11	6	35.29	-	-	-
OR52A5	0	genome.wustl.edu	37	11	5153189	5153189	+	Silent	SNP	G	G	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	11	5153189	5153189	G	T	SNP	OR52A5	ENST00000307388	human	ensembl	69_37n	-1	known	silent	c.684	p.V228	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR52A5	HGNC	ENSG00000171944	26	0	0.00	23	6	20.69	-	-	-
PALLD	0	genome.wustl.edu	37	4	169611772	169611772	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	4	169611772	169611772	G	A	SNP	PALLD	ENST00000261509	human	ensembl	69_37n	+1	known	missense	c.1354	p.V452M	0.692	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	PALLD	HGNC	ENSG00000129116	59	0	0.00	31	16	34.04	-	-	-
PLEKHA6	0	genome.wustl.edu	37	1	204199663	204199663	+	Missense_Mutation	SNP	C	C	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	1	204199663	204199663	C	A	SNP	PLEKHA6	ENST00000272203	human	ensembl	69_37n	-1	known	missense	c.2461	p.V821L	0.998	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	58	0	0.00	56	51	47.66	-	-	-
PLEKHF1	0	genome.wustl.edu	37	19	30165101	30165101	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	19	30165101	30165101	C	T	SNP	PLEKHF1	ENST00000436066	human	ensembl	69_37n	+1	known	missense	c.355	p.R119C	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Znf_FYVE,pfam_Pleckstrin_homology,superfamily_Znf_FYVE_PHD,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel	-	no_errors	PLEKHF1	HGNC	ENSG00000166289	54	0	0.00	55	17	23.61	-	-	-
PNISR	0	genome.wustl.edu	37	6	99848141	99848141	+	RNA	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	6	99848141	99848141	C	T	SNP	PNISR	ENST00000481229	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	PNISR	HGNC	ENSG00000132424	40	0	0.00	80	9	10.11	-	-	-
RBM3	0	genome.wustl.edu	37	X	48434060	48434060	+	RNA	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	X	48434060	48434060	G	A	SNP	RBM3	ENST00000485213	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	RBM3	HGNC	ENSG00000102317	66	0	0.00	79	23	22.55	-	-	-
SALL1	0	genome.wustl.edu	37	16	51173053	51173053	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	16	51173053	51173053	C	T	SNP	SALL1	ENST00000251020	human	ensembl	69_37n	-1	known	missense	c.3080	p.R1027K	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449	35	0	0.00	11	10	47.62	-	-	-
SEL1L3	0	genome.wustl.edu	37	4	25750062	25750062	+	Silent	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	4	25750062	25750062	C	T	SNP	SEL1L3	ENST00000399878	human	ensembl	69_37n	-1	known	silent	c.3384	p.P1128	0.001	NULL	pfam_Sel1-like,superfamily_ConA-like_lec_gl,smart_Sel1-like	-	no_errors	SEL1L3	HGNC	ENSG00000091490	73	0	0.00	31	40	56.34	-	-	-
SEZ6	0	genome.wustl.edu	37	17	27296881	27296881	+	Missense_Mutation	SNP	G	G	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	17	27296881	27296881	G	T	SNP	SEZ6	ENST00000317338	human	ensembl	69_37n	-1	known	missense	c.948	p.F316L	0.998	superfamily_CUB	pfam_Sushi_SCR_CCP,pfam_CUB,superfamily_CUB,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,smart_CUB,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6	HGNC	ENSG00000063015	101	0	0.00	15	61	80.26	-	-	-
TEAD3	0	genome.wustl.edu	37	6	35442832	35442832	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	6	35442832	35442832	C	T	SNP	TEAD3	ENST00000402886	human	ensembl	69_37n	-1	novel	missense	c.1117	p.V373I	1.000	pirsf_TEF	pfam_TEA/ATTS,pirsf_TEF	-	no_errors	TEAD3	HGNC	ENSG00000007866	53	0	0.00	95	16	14.41	-	-	-
TGM6	0	genome.wustl.edu	37	20	2413157	2413157	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	20	2413157	2413157	G	A	SNP	TGM6	ENST00000381423	human	ensembl	69_37n	+1	known	missense	c.1855	p.G619R	1.000	NULL	pfam_Transglutaminase_N,pfam_Transglutaminase_C,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM6	HGNC	ENSG00000166948	42	0	0.00	12	11	47.83	-	-	-
TMEM100	0	genome.wustl.edu	37	17	53798216	53798216	+	Silent	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	17	53798216	53798216	G	A	SNP	TMEM100	ENST00000424486	human	ensembl	69_37n	-1	known	silent	c.216	p.T72	0.181	NULL	NULL	-	no_errors	TMEM100	HGNC	ENSG00000166292	54	0	0.00	6	45	88.24	-	-	-
TMEM132C	0	genome.wustl.edu	37	12	129180413	129180413	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	12	129180413	129180413	G	A	SNP	TMEM132C	ENST00000435159	human	ensembl	69_37n	+1	known	missense	c.1694	p.R565Q	0.816	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	62	0	0.00	36	25	40.98	-	-	-
TNXB	0	genome.wustl.edu	37	6	32020477	32020477	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	6	32020477	32020477	C	T	SNP	TNXB	ENST00000375247	human	ensembl	69_37n	-1	known	missense	c.9079	p.V3027M	0.725	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C,superfamily_Fibronectin_type3,smart_EGF-like,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	57	0	0.00	80	20	20.00	-	-	-
TP53	0	genome.wustl.edu	37	17	7578265	7578265	+	Missense_Mutation	SNP	A	A	G			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	17	7578265	7578265	A	G	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.584	p.I195T	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	45	0	0.00	12	31	72.09	-	-	-
TXNDC11	0	genome.wustl.edu	37	16	11782284	11782284	+	Missense_Mutation	SNP	A	A	C			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	16	11782284	11782284	A	C	SNP	TXNDC11	ENST00000356957	human	ensembl	69_37n	-1	known	missense	c.1999	p.F667V	1.000	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC	ENSG00000153066	29	0	0.00	42	8	16.00	-	-	-
USP32P2	0	genome.wustl.edu	37	17	18415379	18415382	+	RNA	DEL	TATT	TATT	-			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	TATT	TATT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	17	18415379	18415382	TATT	-	DEL	USP32P2	ENST00000412260	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.702:0.636:0.550:0.518	-	-	-	no_errors	USP32P2	HGNC	ENSG00000233327	29	0	0.00	14	4	22.22	-	-	-
WDFY4	0	genome.wustl.edu	37	10	49998825	49998825	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	10	49998825	49998825	G	A	SNP	WDFY4	ENST00000325239	human	ensembl	69_37n	+1	known	missense	c.4120	p.G1374R	0.907	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815	56	0	0.00	73	14	16.09	-	-	-
ZNF541	0	genome.wustl.edu	37	19	48058876	48058876	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A62X-01A-11D-A29N-09	TCGA-AC-A62X-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c16a9047-5cff-4096-902f-de7ceca1c349	495a1629-20ff-41e2-b82f-c7d17da58369	19	48058876	48058876	C	T	SNP	ZNF541	ENST00000314121	human	ensembl	69_37n	-1	known	missense	c.238	p.G80R	0.972	NULL	pfam_ELM2_dom,pfam_Znf_C2H2,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	ZNF541	HGNC	ENSG00000118156	36	0	0.00	44	24	35.29	-	-	-
