Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACY3	0	genome.wustl.edu	37	11	67414330	67414331	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	11	67414330	67414331	-	G	INS	ACY3	ENST00000255082	human	ensembl	69_37n	-1	known	frame_shift_ins	c.185_184	p.R62fs	0.864:0.864	pfam_Aste_AspA,pirsf_Aspartoacylase	pfam_Aste_AspA,pirsf_Aspartoacylase	-	no_errors	ACY3	HGNC	ENSG00000132744	17	0	0.00	5	2	28.57	-	-	-
ADAM10	0	genome.wustl.edu	37	15	58974428	58974428	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	15	58974428	58974428	C	G	SNP	ADAM10	ENST00000260408	human	ensembl	69_37n	-1	known	missense	c.292	p.D98H	1.000	pfam_Peptidase_M12B_N	pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM10	HGNC	ENSG00000137845	122	0	0.00	53	6	10.17	-	-	-
AMN1	0	genome.wustl.edu	37	12	31862280	31862280	+	Silent	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	12	31862280	31862280	G	A	SNP	AMN1	ENST00000281471	human	ensembl	69_37n	-1	known	silent	c.118	p.L40	0.983	NULL	smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	AMN1	HGNC	ENSG00000151743	345	0	0.00	273	37	11.90	-	-	-
ARHGAP17	0	genome.wustl.edu	37	16	24971256	24971256	+	Silent	SNP	C	C	G			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	16	24971256	24971256	C	G	SNP	ARHGAP17	ENST00000289968	human	ensembl	69_37n	-1	known	silent	c.618	p.G206	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP17	HGNC	ENSG00000140750	349	2	0.57	163	59	26.58	-	-	-
ATP2B3	0	genome.wustl.edu	37	X	152822475	152822475	+	Silent	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	X	152822475	152822475	C	T	SNP	ATP2B3	ENST00000263519	human	ensembl	69_37n	+1	known	silent	c.2427	p.F809	0.601	pfam_HAD-SF_hydro-like_3,superfamily_HAD-like_dom,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2B3	HGNC	ENSG00000067842	77	0	0.00	13	7	35.00	-	-	-
BAI2	0	genome.wustl.edu	37	1	32208507	32208508	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	1	32208507	32208508	-	G	INS	BAI2	ENST00000373658	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1184_1183	p.Q395fs	1.000:1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	25	0	0.00	5	3	37.50	-	-	-
CACNA1G	0	genome.wustl.edu	37	17	48646555	48646555	+	Silent	SNP	T	T	C			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	17	48646555	48646555	T	C	SNP	CACNA1G	ENST00000359106	human	ensembl	69_37n	+1	known	silent	c.384	p.F128	0.999	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	401	0	0.00	224	47	17.28	-	-	-
CCDC127	0	genome.wustl.edu	37	5	216868	216868	+	Missense_Mutation	SNP	G	G	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	5	216868	216868	G	T	SNP	CCDC127	ENST00000296824	human	ensembl	69_37n	-1	known	missense	c.97	p.P33T	1.000	NULL	NULL	-	no_errors	CCDC127	HGNC	ENSG00000164366	80	0	0.00	22	3	12.00	-	-	-
CCDC136	0	genome.wustl.edu	37	7	128446752	128446752	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	7	128446752	128446752	G	A	SNP	CCDC136	ENST00000297788	human	ensembl	69_37n	+1	known	missense	c.1259	p.C420Y	0.798	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596	22	0	0.00	36	12	24.49	-	-	-
CCL11	0	genome.wustl.edu	37	17	32614626	32614626	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	17	32614626	32614626	G	A	SNP	CCL11	ENST00000305869	human	ensembl	69_37n	+1	known	missense	c.211	p.D71N	0.001	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL11	HGNC	ENSG00000172156	156	1	0.64	101	17	14.41	-	-	-
CD3G	0	genome.wustl.edu	37	11	118221279	118221279	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	11	118221279	118221279	G	A	SNP	CD3G	ENST00000532917	human	ensembl	69_37n	+1	known	missense	c.320	p.C107Y	1.000	NULL	pfam_Phos_immunorcpt_sig_ITAM,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM	-	no_errors	CD3G	HGNC	ENSG00000160654	254	0	0.00	155	20	11.43	-	-	-
CNTNAP4	0	genome.wustl.edu	37	16	76350228	76350228	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	16	76350228	76350228	T	C	SNP	CNTNAP4	ENST00000476707	human	ensembl	69_37n	+1	putative	missense	c.13	p.Y5H	0.000	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EGF-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	69	0	0.00	18	19	51.35	-	-	-
COL14A1	0	genome.wustl.edu	37	8	121209087	121209087	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	8	121209087	121209087	G	A	SNP	COL14A1	ENST00000523142	human	ensembl	69_37n	+1	putative	nonsense	c.48	p.W16*	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,superfamily_Fibronectin_type3,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_start_codon:pseudogene:no_stop_codon	COL14A1	HGNC	ENSG00000187955	132	1	0.75	89	27	23.08	-	-	-
CTCF	0	genome.wustl.edu	37	16	67645507	67645507	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	16	67645507	67645507	A	G	SNP	CTCF	ENST00000264010	human	ensembl	69_37n	+1	known	missense	c.772	p.K258E	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCF	HGNC	ENSG00000102974	92	0	0.00	26	20	43.48	-	-	-
DNAH3	0	genome.wustl.edu	37	16	21145740	21145740	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	16	21145740	21145740	G	A	SNP	DNAH3	ENST00000261383	human	ensembl	69_37n	-1	known	missense	c.922	p.R308W	0.923	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	135	1	0.74	106	57	34.97	-	-	-
DNMT1	0	genome.wustl.edu	37	19	10290875	10290875	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	19	10290875	10290875	T	-	DEL	DNMT1	ENST00000359526	human	ensembl	69_37n	-1	known	frame_shift_del	c.481	p.T161fs	0.022	pirsf_DNA_C5-MeTrfase_1_euk	pirsf_DNA_C5-MeTrfase_1_euk,pfam_C5_MeTfrase,pfam_BAH_dom,pfam_Cytosine_MeTrfase1_RFD,pfam_DMAP1-bd,pfam_Znf_CXXC,smart_BAH_dom,prints_C5_MeTfrase,pfscan_BAH_dom,pfscan_Znf_CXXC	-	no_errors	DNMT1	HGNC	ENSG00000130816	8	0	0.00	10	33	76.74	-	-	-
DNMT1	0	genome.wustl.edu	37	19	10290878	10290879	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	19	10290878	10290879	-	T	INS	DNMT1	ENST00000359526	human	ensembl	69_37n	-1	known	frame_shift_ins	c.478_477	p.V159fs	0.010:0.007	pirsf_DNA_C5-MeTrfase_1_euk	pirsf_DNA_C5-MeTrfase_1_euk,pfam_C5_MeTfrase,pfam_BAH_dom,pfam_Cytosine_MeTrfase1_RFD,pfam_DMAP1-bd,pfam_Znf_CXXC,smart_BAH_dom,prints_C5_MeTfrase,pfscan_BAH_dom,pfscan_Znf_CXXC	-	no_errors	DNMT1	HGNC	ENSG00000130816	10	0	0.00	9	34	79.07	-	-	-
DTX2	0	genome.wustl.edu	37	7	76121509	76121509	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	7	76121509	76121509	C	T	SNP	DTX2	ENST00000435251	human	ensembl	69_37n	+1	known	missense	c.40	p.R14C	0.015	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	DTX2	Clone_based_vega_gene	ENSG00000091073	12	0	0.00	19	10	33.33	-	-	-
ENTPD6	0	genome.wustl.edu	37	20	25196322	25196322	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	20	25196322	25196322	G	A	SNP	ENTPD6	ENST00000433417	human	ensembl	69_37n	+1	known	missense	c.446	p.R149H	0.027	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ENTPD6	HGNC	ENSG00000197586	82	0	0.00	27	15	35.71	-	-	-
EPHA3	0	genome.wustl.edu	37	3	89391074	89391074	+	Silent	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	3	89391074	89391074	C	T	SNP	EPHA3	ENST00000336596	human	ensembl	69_37n	+1	known	silent	c.1140	p.V380	0.709	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524	139	0	0.00	84	25	22.94	-	-	-
EPO	0	genome.wustl.edu	37	7	100320315	100320316	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	7	100320315	100320316	-	G	INS	EPO	ENST00000252723	human	ensembl	69_37n	+1	known	frame_shift_ins	c.275_276	p.L94fs	1.000:1.000	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,pirsf_Erythroptn,prints_Erythroptn	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,pirsf_Erythroptn,prints_Erythroptn	-	no_errors	EPO	HGNC	ENSG00000130427	42	0	0.00	29	5	14.71	-	-	-
FAM71E2	0	genome.wustl.edu	37	19	55870662	55870662	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	19	55870662	55870662	G	-	DEL	FAM71E2	ENST00000424985	human	ensembl	69_37n	-1	novel	frame_shift_del	c.1574	p.P525fs	0.001	NULL	pfam_DUF3699	-	no_errors	FAM71E2	HGNC	ENSG00000180043	33	0	0.00	6	2	25.00	-	-	-
FGFR4	0	genome.wustl.edu	37	5	176524359	176524359	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	5	176524359	176524359	G	-	DEL	FGFR4	ENST00000292408	human	ensembl	69_37n	+1	known	frame_shift_del	c.2220	p.E741fs	0.999	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_fibroblast_GF_rcpt,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_fibroblast_GF_rcpt,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	FGFR4	HGNC	ENSG00000160867	71	0	0.00	15	2	11.76	-	-	-
GAS7	0	genome.wustl.edu	37	17	9837520	9837520	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	17	9837520	9837520	G	A	SNP	GAS7	ENST00000432992	human	ensembl	69_37n	-1	known	missense	c.848	p.A283V	0.798	pfam_FCH,smart_FCH,pfscan_FCH	pfam_FCH,pfam_WW_Rsp5_WWP,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_WW_Rsp5_WWP,smart_SH3_domain,smart_WW_Rsp5_WWP,smart_FCH,pfscan_FCH,pfscan_SH3_domain,pfscan_WW_Rsp5_WWP	-	no_errors	GAS7	HGNC	ENSG00000007237	210	0	0.00	78	37	31.90	-	-	-
GPR155	0	genome.wustl.edu	37	2	175335282	175335282	+	Missense_Mutation	SNP	G	G	C			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	2	175335282	175335282	G	C	SNP	GPR155	ENST00000295500	human	ensembl	69_37n	-1	known	missense	c.862	p.L288V	1.000	pfam_Auxin_eff	pfam_Auxin_eff,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	GPR155	HGNC	ENSG00000163328	78	0	0.00	41	7	14.58	-	-	-
HDAC4	0	genome.wustl.edu	37	2	240011772	240011772	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	2	240011772	240011772	C	T	SNP	HDAC4	ENST00000345617	human	ensembl	69_37n	-1	known	missense	c.2306	p.G769E	0.998	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024	35	0	0.00	50	32	39.02	-	-	-
HMHA1	0	genome.wustl.edu	37	19	1081038	1081039	+	Frame_Shift_Ins	INS	-	-	CGGC			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	19	1081038	1081039	-	CGGC	INS	HMHA1	ENST00000313093	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2165_2166	p.F723fs	1.000:1.000	smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448	12	0	0.00	3	5	62.50	-	-	-
IGHV1-18	0	genome.wustl.edu	37	14	106641745	106641745	+	Silent	SNP	G	G	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	14	106641745	106641745	G	T	SNP	IGHV1-18	ENST00000390605	human	ensembl	69_37n	-1	known	silent	c.169	p.R57	0.897	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV1-18	HGNC	ENSG00000211945	192	1	0.52	134	73	35.10	-	-	-
IRS1	0	genome.wustl.edu	37	2	227661200	227661200	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	2	227661200	227661200	C	-	DEL	IRS1	ENST00000305123	human	ensembl	69_37n	-1	known	frame_shift_del	c.2255	p.G752fs	0.406	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047	34	0	0.00	8	2	20.00	-	-	-
KCNA3	0	genome.wustl.edu	37	1	111216103	111216104	+	Frame_Shift_Ins	INS	-	-	AA			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	1	111216103	111216104	-	AA	INS	KCNA3	ENST00000369769	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1329_1328	p.T444fs	0.746:1.000	pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.3,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA3	HGNC	ENSG00000177272	81	0	0.00	24	14	36.84	-	-	-
KLHL22	0	genome.wustl.edu	37	22	20800742	20800742	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	22	20800742	20800742	C	T	SNP	KLHL22	ENST00000429594	human	ensembl	69_37n	-1	known	missense	c.166	p.G56R	0.875	NULL	pfam_Kelch_1	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	KLHL22	HGNC	ENSG00000099910	189	1	0.53	89	167	64.98	-	-	-
KRI1	0	genome.wustl.edu	37	19	10670359	10670359	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	19	10670359	10670359	G	A	SNP	KRI1	ENST00000312962	human	ensembl	69_37n	-1	known	missense	c.971	p.A324V	0.039	NULL	pfam_KRR1-interact_protein_1	-	no_errors	KRI1	HGNC	ENSG00000129347	156	1	0.64	52	156	74.29	-	-	-
KRTAP4-3	0	genome.wustl.edu	37	17	39324182	39324182	+	Silent	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	17	39324182	39324182	C	T	SNP	KRTAP4-3	ENST00000391356	human	ensembl	69_37n	-1	known	silent	c.243	p.R81	0.000	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-3	HGNC	ENSG00000196156	123	0	0.00	48	10	17.24	-	-	-
KRTAP4-3	0	genome.wustl.edu	37	17	39324272	39324272	+	Silent	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	17	39324272	39324272	C	T	SNP	KRTAP4-3	ENST00000391356	human	ensembl	69_37n	-1	known	silent	c.153	p.R51	0.000	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-3	HGNC	ENSG00000196156	134	0	0.00	75	11	12.50	-	-	-
LPGAT1	0	genome.wustl.edu	37	1	211956599	211956600	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	1	211956599	211956600	-	CT	INS	LPGAT1	ENST00000366996	human	ensembl	69_37n	-1	known	frame_shift_ins	c.699_698	p.S233fs	1.000:1.000	NULL	pfam_Acyltransferase,smart_Acyltransferase	-	no_errors	LPGAT1	HGNC	ENSG00000123684	90	0	0.00	52	59	53.15	-	-	-
MAN1A2	0	genome.wustl.edu	37	1	117910860	117910860	+	Silent	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	1	117910860	117910860	C	T	SNP	MAN1A2	ENST00000356554	human	ensembl	69_37n	+1	known	silent	c.55	p.L19	1.000	NULL	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1A2	HGNC	ENSG00000198162	68	0	0.00	57	33	36.67	-	-	-
MAP1A	0	genome.wustl.edu	37	15	43820168	43820168	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	15	43820168	43820168	C	A	SNP	MAP1A	ENST00000399453	human	ensembl	69_37n	+1	known	nonsense	c.6497	p.S2166*	1.000	NULL	NULL	-	no_errors	MAP1A	HGNC	ENSG00000166963	67	0	0.00	16	6	27.27	-	-	-
MPHOSPH10	0	genome.wustl.edu	37	2	71360269	71360269	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	2	71360269	71360269	G	A	SNP	MPHOSPH10	ENST00000244230	human	ensembl	69_37n	+1	known	missense	c.331	p.E111K	0.206	pfam_Mpp10,pirsf_snoRNP_Mpp10	pfam_Mpp10,pirsf_snoRNP_Mpp10	-	no_errors	MPHOSPH10	HGNC	ENSG00000124383	113	0	0.00	66	8	10.81	-	-	-
MTMR7	0	genome.wustl.edu	37	8	17188758	17188758	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	8	17188758	17188758	C	T	SNP	MTMR7	ENST00000180173	human	ensembl	69_37n	-1	known	missense	c.766	p.G256S	1.000	pfam_Myotub-related	pfam_Myotub-related,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase	-	no_errors	MTMR7	HGNC	ENSG00000003987	170	0	0.00	68	52	43.33	-	-	-
MYH13	0	genome.wustl.edu	37	17	10233721	10233721	+	Silent	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	17	10233721	10233721	C	T	SNP	MYH13	ENST00000252172	human	ensembl	69_37n	-1	known	silent	c.2418	p.K806	1.000	pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH13	HGNC	ENSG00000006788	136	0	0.00	121	21	14.79	-	-	-
NACC1	0	genome.wustl.edu	37	19	13246395	13246395	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	19	13246395	13246395	C	-	DEL	NACC1	ENST00000292431	human	ensembl	69_37n	+1	known	frame_shift_del	c.374	p.P126fs	1.000	NULL	pfam_BTB_POZ,pfam_BEN_domain,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	NACC1	HGNC	ENSG00000160877	27	0	0.00	4	2	33.33	-	-	-
NHS	0	genome.wustl.edu	37	X	17744061	17744061	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	X	17744061	17744061	C	T	SNP	NHS	ENST00000380060	human	ensembl	69_37n	+1	known	missense	c.1772	p.T591M	0.998	NULL	NULL	-	no_errors	NHS	HGNC	ENSG00000188158	125	0	0.00	54	18	25.00	-	-	-
NINL	0	genome.wustl.edu	37	20	25477324	25477324	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	20	25477324	25477324	C	T	SNP	NINL	ENST00000278886	human	ensembl	69_37n	-1	known	missense	c.1285	p.E429K	1.000	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	NINL	HGNC	ENSG00000101004	93	0	0.00	25	11	30.56	-	-	-
ODZ2	0	genome.wustl.edu	37	5	167631625	167631625	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	5	167631625	167631625	C	T	SNP	ODZ2	ENST00000518659	human	ensembl	69_37n	+1	known	nonsense	c.3823	p.R1275*	1.000	superfamily_ConA-like_lec_gl	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl,superfamily_Cytokine_IL1-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ2	HGNC	ENSG00000145934	117	0	0.00	72	31	30.10	-	-	-
PCOLCE	0	genome.wustl.edu	37	7	100202789	100202790	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	7	100202789	100202790	-	C	INS	PCOLCE	ENST00000223061	human	ensembl	69_37n	+1	known	frame_shift_ins	c.539_540	p.G184fs	1.000:1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Netrin_module_non-TIMP,superfamily_CUB,superfamily_TIMP-like_OB-fold,smart_CUB,smart_Netrin_module_non-TIMP,pfscan_CUB,pfscan_Netrin_domain	-	no_errors	PCOLCE	HGNC	ENSG00000106333	80	0	0.00	13	2	13.33	-	-	-
PCSK5	0	genome.wustl.edu	37	9	78790207	78790207	+	Silent	SNP	C	C	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	9	78790207	78790207	C	A	SNP	PCSK5	ENST00000376767	human	ensembl	69_37n	+1	known	silent	c.2062	p.R688	0.000	NULL	pfam_Peptidase_S8/S53,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK5	HGNC	ENSG00000099139	16	0	0.00	8	7	46.67	-	-	-
PIGO	0	genome.wustl.edu	37	9	35091522	35091523	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	9	35091522	35091523	-	G	INS	PIGO	ENST00000341666	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2362_2361	p.T787fs	0.637:0.393	NULL	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGO	HGNC	ENSG00000165282	72	0	0.00	40	5	11.11	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	124	0	0.00	92	20	17.86	-	-	-
PIWIL1	0	genome.wustl.edu	37	12	130856048	130856048	+	Missense_Mutation	SNP	C	C	G			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	12	130856048	130856048	C	G	SNP	PIWIL1	ENST00000245255	human	ensembl	69_37n	+1	known	missense	c.2491	p.P831A	1.000	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	615	0	0.00	208	24	10.30	-	-	-
PKN1	0	genome.wustl.edu	37	19	14574911	14574911	+	Silent	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	19	14574911	14574911	G	A	SNP	PKN1	ENST00000342216	human	ensembl	69_37n	+1	known	silent	c.1695	p.S565	0.000	NULL	pfam_Prot_kinase_cat_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_cat_dom	-	no_errors	PKN1	HGNC	ENSG00000123143	46	0	0.00	25	13	34.21	-	-	-
PPL	0	genome.wustl.edu	37	16	4935600	4935600	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	16	4935600	4935600	G	-	DEL	PPL	ENST00000345988	human	ensembl	69_37n	-1	known	frame_shift_del	c.3056	p.A1019fs	0.703	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898	31	0	0.00	8	4	33.33	-	-	-
PPL	0	genome.wustl.edu	37	16	4935601	4935602	+	Frame_Shift_Ins	INS	-	-	TT			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	16	4935601	4935602	-	TT	INS	PPL	ENST00000345988	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3055_3054	p.A1018fs	0.989:0.989	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898	31	0	0.00	8	4	33.33	-	-	-
PROX2	0	genome.wustl.edu	37	14	75321979	75321979	+	Silent	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	14	75321979	75321979	G	A	SNP	PROX2	ENST00000445876	human	ensembl	69_37n	-1	known	silent	c.1635	p.A545	1.000	pfam_Prox1,superfamily_Homeodomain-like	pfam_Prox1,superfamily_Homeodomain-like	-	no_errors	PROX2	HGNC	ENSG00000119608	72	0	0.00	61	23	27.38	-	-	-
SAT1	0	genome.wustl.edu	37	X	23801965	23801965	+	Missense_Mutation	SNP	T	T	C			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	X	23801965	23801965	T	C	SNP	SAT1	ENST00000379270	human	ensembl	69_37n	+1	known	missense	c.167	p.V56A	1.000	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	SAT1	HGNC	ENSG00000130066	139	1	0.71	61	60	49.59	-	-	-
SDR9C7	0	genome.wustl.edu	37	12	57323336	57323336	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	12	57323336	57323336	G	A	SNP	SDR9C7	ENST00000293502	human	ensembl	69_37n	-1	known	missense	c.562	p.R188C	1.000	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	SDR9C7	HGNC	ENSG00000170426	140	1	0.71	81	36	30.77	-	-	-
SLC22A11	0	genome.wustl.edu	37	11	64323714	64323715	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	11	64323714	64323715	-	C	INS	SLC22A11	ENST00000301891	human	ensembl	69_37n	+1	known	frame_shift_ins	c.243_244	p.H82fs	0.011:0.110	NULL	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A11	HGNC	ENSG00000168065	52	0	0.00	5	4	44.44	-	-	-
SLC25A31	0	genome.wustl.edu	37	4	128665852	128665852	+	Silent	SNP	T	T	C			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	4	128665852	128665852	T	C	SNP	SLC25A31	ENST00000281154	human	ensembl	69_37n	+1	known	silent	c.258	p.N86	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,prints_Mit_carrier,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,prints_Mit_carrier,prints_Aden_trnslctor,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A31	HGNC	ENSG00000151475	237	0	0.00	202	28	12.17	-	-	-
SLC27A3	0	genome.wustl.edu	37	1	153747748	153747748	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	1	153747748	153747748	C	-	DEL	SLC27A3	ENST00000271857	human	ensembl	69_37n	+1	novel	frame_shift_del	c.159	p.W54fs	0.808	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A3	HGNC	ENSG00000143554	8	0	0.00	7	4	36.36	-	-	-
SNX8	0	genome.wustl.edu	37	7	2297060	2297062	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	7	2297060	2297062	GCT	-	DEL	SNX8	ENST00000222990	human	ensembl	69_37n	-1	known	in_frame_del	c.1074_1072	p.S358in_frame_del	0.983:1.000:1.000	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX8	HGNC	ENSG00000106266	25	0	0.00	3	4	57.14	-	-	-
SVEP1	0	genome.wustl.edu	37	9	113169977	113169977	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	9	113169977	113169977	C	A	SNP	SVEP1	ENST00000401783	human	ensembl	69_37n	-1	known	nonsense	c.7903	p.E2635*	0.075	NULL	pfam_Sushi_SCR_CCP,pfam_EGF-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Complement_control_module,superfamily_Growth_fac_rcpt,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd,smart_EGF-like,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124	40	0	0.00	42	6	12.50	-	-	-
TBC1D10C	0	genome.wustl.edu	37	11	67174406	67174406	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	11	67174406	67174406	C	-	DEL	TBC1D10C	ENST00000312390	human	ensembl	69_37n	+1	known	frame_shift_del	c.757	p.E254fs	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D10C	HGNC	ENSG00000175463	45	0	0.00	8	2	20.00	-	-	-
TBC1D12	0	genome.wustl.edu	37	10	96291202	96291203	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	10	96291202	96291203	-	A	INS	TBC1D12	ENST00000225235	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2244_2245	p.W750fs	1.000:1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D12	HGNC	ENSG00000108239	27	0	0.00	18	2	10.00	-	-	-
TBX3	0	genome.wustl.edu	37	12	115115457	115115458	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	12	115115457	115115458	-	T	INS	TBX3	ENST00000257566	human	ensembl	69_37n	-1	known	frame_shift_ins	c.869_868	p.T290fs	1.000:1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX3	HGNC	ENSG00000135111	229	1	0.43	80	40	33.33	-	-	-
TIRAP	0	genome.wustl.edu	37	11	126162498	126162498	+	Missense_Mutation	SNP	C	C	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	11	126162498	126162498	C	T	SNP	TIRAP	ENST00000392678	human	ensembl	69_37n	+1	known	missense	c.194	p.T65M	0.000	pirsf_Tol-interleuk_rcpt_adapt_Tirap	pfam_TIR_dom,superfamily_TIR_dom,pirsf_Tol-interleuk_rcpt_adapt_Tirap,pfscan_TIR_dom	-	no_errors	TIRAP	HGNC	ENSG00000150455	175	0	0.00	60	72	54.55	-	-	-
TRPV6	0	genome.wustl.edu	37	7	142575020	142575020	+	Missense_Mutation	SNP	A	A	C			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	7	142575020	142575020	A	C	SNP	TRPV6	ENST00000359396	human	ensembl	69_37n	-1	known	missense	c.362	p.L121R	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6_channel,prints_TRPV6_channel,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV6	HGNC	ENSG00000165125	162	0	0.00	60	26	29.89	-	-	-
TUB	0	genome.wustl.edu	37	11	8118904	8118905	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	11	8118904	8118905	AA	-	DEL	TUB	ENST00000305253	human	ensembl	69_37n	+1	known	frame_shift_del	c.982_983	p.K328fs	1.000:1.000	pfam_Tubby_C,superfamily_Tubby_C-like	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_N,prints_Tubby_C	-	no_errors	TUB	HGNC	ENSG00000166402	98	0	0.00	59	53	47.32	-	-	-
TXLNG	0	genome.wustl.edu	37	X	16838307	16838307	+	Missense_Mutation	SNP	A	A	T			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	X	16838307	16838307	A	T	SNP	TXLNG	ENST00000380122	human	ensembl	69_37n	+1	known	missense	c.427	p.M143L	1.000	pfam_Taxilin	pfam_Taxilin	-	no_errors	TXLNG	HGNC	ENSG00000086712	99	0	0.00	81	36	30.77	-	-	-
VNN1	0	genome.wustl.edu	37	6	133004427	133004427	+	Missense_Mutation	SNP	G	G	A			TCGA-AN-A0FS-01A-11W-A050-09	TCGA-AN-A0FS-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bb76d20-cefb-4f7a-80c2-aa2178e302a9	608d90c1-f205-43fa-a9cd-dcdf54bb927d	6	133004427	133004427	G	A	SNP	VNN1	ENST00000367928	human	ensembl	69_37n	-1	known	missense	c.1394	p.P465L	0.713	pirsf_Biotinidase_euk	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	-	no_errors	VNN1	HGNC	ENSG00000112299	244	2	0.81	173	66	27.62	-	-	-
