Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
CDC42BPG	0	genome.wustl.edu	37	11	64591956	64591956	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	11	64591956	64591956	T	G	SNP	CDC42BPG	ENST00000342711	human	ensembl	69_37n	-1	known	missense	c.4645	p.S1549R	0.754	NULL	pfam_Prot_kinase_cat_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_PAK_box_Rho-bd,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219	177	1	0.56	87	29	25.00	-	-	-
CDH1	0	genome.wustl.edu	37	16	68845694	68845694	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	16	68845694	68845694	A	-	DEL	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_del	c.940	p.N315fs	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	137	0	0.00	47	24	33.33	-	-	-
DNTT	0	genome.wustl.edu	37	10	98092128	98092128	+	Silent	SNP	C	C	T			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	10	98092128	98092128	C	T	SNP	DNTT	ENST00000371174	human	ensembl	69_37n	+1	known	silent	c.1134	p.D378	0.984	pfam_Nucleotidyltransferase,smart_DNA-dir_DNA_pol_X,pirsf_DNA_nucleotidylexotransferase	pfam_DNA_pol_lambd_fingers_domain,pfam_BRCT_dom,pfam_Nucleotidyltransferase,superfamily_DNA-dir_DNA_pol_X_beta-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_DNA-dir_DNA_pol_X,pirsf_DNA_nucleotidylexotransferase,pfscan_BRCT_dom,prints_DNA_nucleotidylexotransferase,prints_DNA_pol_X,prints_DNA_pol_X_beta-like	-	no_errors	DNTT	HGNC	ENSG00000107447	317	0	0.00	94	51	35.17	-	-	-
EPS15	0	genome.wustl.edu	37	1	51864825	51864825	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	1	51864825	51864825	C	A	SNP	EPS15	ENST00000371733	human	ensembl	69_37n	-1	known	missense	c.1931	p.G644V	1.000	NULL	smart_EPS15_homology,smart_EF_hand_Ca-bd,smart_Ubiquitin-int_motif,pfscan_EF_HAND_2,pfscan_EPS15_homology,pfscan_Ubiquitin-int_motif	-	no_errors	EPS15	HGNC	ENSG00000085832	146	1	0.68	69	27	28.12	-	-	-
FAM214A	0	genome.wustl.edu	37	15	52901580	52901580	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	15	52901580	52901580	G	C	SNP	FAM214A	ENST00000261844	human	ensembl	69_37n	-1	known	missense	c.1531	p.H511D	0.000	NULL	NULL	-	no_errors	FAM214A	HGNC	ENSG00000047346	105	0	0.00	55	22	28.57	-	-	-
FAM75D5	0	genome.wustl.edu	37	9	84532898	84532898	+	RNA	SNP	G	G	T			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	9	84532898	84532898	G	T	SNP	FAM75D5	ENST00000527857	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM75D5	HGNC	ENSG00000240632	53	0	0.00	19	4	17.39	-	-	-
FOXK1	0	genome.wustl.edu	37	7	4780597	4780597	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	7	4780597	4780597	C	T	SNP	FOXK1	ENST00000328914	human	ensembl	69_37n	+1	known	missense	c.689	p.P230L	1.000	NULL	pfam_TF_fork_head,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_TF_fork_head,pfscan_FHA_dom,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXK1	HGNC	ENSG00000164916	65	0	0.00	28	10	26.32	-	-	-
GOT1L1	0	genome.wustl.edu	37	8	37792595	37792595	+	Silent	SNP	G	G	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	8	37792595	37792595	G	A	SNP	GOT1L1	ENST00000307599	human	ensembl	69_37n	-1	known	silent	c.1068	p.L356	0.988	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom,prints_Asp_trans	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom,prints_Asp_trans	-	no_errors	GOT1L1	HGNC	ENSG00000169154	162	0	0.00	81	21	20.59	-	-	-
MAMDC2	0	genome.wustl.edu	37	9	72727930	72727930	+	Silent	SNP	T	T	C			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	9	72727930	72727930	T	C	SNP	MAMDC2	ENST00000377182	human	ensembl	69_37n	+1	known	silent	c.525	p.N175	0.943	pfam_MAM_dom,superfamily_ConA-like_lec_gl,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,superfamily_ConA-like_lec_gl,smart_MAM_dom,prints_MAM_dom,pfscan_MAM_dom	-	no_errors	MAMDC2	HGNC	ENSG00000165072	320	0	0.00	124	42	25.30	-	-	-
MLL	0	genome.wustl.edu	37	11	118354912	118354912	+	Silent	SNP	G	G	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	11	118354912	118354912	G	A	SNP	MLL	ENST00000389506	human	ensembl	69_37n	+1	known	silent	c.4101	p.P1367	0.002	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	MLL	HGNC	ENSG00000118058	220	0	0.00	81	26	24.30	-	-	-
MUC16	0	genome.wustl.edu	37	19	9085518	9085518	+	Silent	SNP	A	A	G			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	19	9085518	9085518	A	G	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	silent	c.6297	p.S2099	0.099	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	173	0	0.00	97	25	20.49	-	-	-
MYH9	0	genome.wustl.edu	37	22	36695005	36695005	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	22	36695005	36695005	C	-	DEL	MYH9	ENST00000216181	human	ensembl	69_37n	-1	known	frame_shift_del	c.3060	p.K1020fs	1.000	superfamily_Prefoldin	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH9	HGNC	ENSG00000100345	533	0	0.00	217	71	24.40	-	-	-
PCGF6	0	genome.wustl.edu	37	10	105107077	105107077	+	Splice_Site	SNP	C	C	G			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	10	105107077	105107077	C	G	SNP	PCGF6	ENST00000490296	human	ensembl	69_37n	-1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	PCGF6	HGNC	ENSG00000156374	363	0	0.00	135	46	25.41	-	-	-
PLCB2	0	genome.wustl.edu	37	15	40590117	40590117	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	15	40590117	40590117	G	A	SNP	PLCB2	ENST00000260402	human	ensembl	69_37n	-1	known	missense	c.1199	p.P400L	0.868	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLC-beta_C,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,prints_Pinositol_PLipase_C,pfscan_C2_membr_targeting,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB2	HGNC	ENSG00000137841	324	1	0.31	116	49	29.70	-	-	-
PUS7L	0	genome.wustl.edu	37	12	44130339	44130339	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	12	44130339	44130339	G	A	SNP	PUS7L	ENST00000344862	human	ensembl	69_37n	-1	known	missense	c.1570	p.H524Y	1.000	pfam_PsdUridine_synth_TruD,superfamily_PsdUridine_synth_cat_dom,pirsf_PsdUridine_synth_TruD_euk,pfscan_PsdUridine_synth_TruD_insert,tigrfam_PsdUridine_synth_TruD	pfam_PsdUridine_synth_TruD,superfamily_PsdUridine_synth_cat_dom,pirsf_PsdUridine_synth_TruD_euk,pfscan_PsdUridine_synth_TruD_insert,tigrfam_PsdUridine_synth_TruD	-	no_errors	PUS7L	HGNC	ENSG00000129317	186	0	0.00	105	23	17.97	-	-	-
RFPL1	0	genome.wustl.edu	37	22	29837624	29837624	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	22	29837624	29837624	G	A	SNP	RFPL1	ENST00000354373	human	ensembl	69_37n	+1	known	missense	c.467	p.R156Q	0.000	superfamily_ConA-like_lec_gl,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL1	HGNC	ENSG00000128250	323	0	0.00	143	58	28.86	-	-	-
RUNX1	0	genome.wustl.edu	37	21	36259157	36259157	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	21	36259157	36259157	G	-	DEL	RUNX1	ENST00000300305	human	ensembl	69_37n	-1	known	frame_shift_del	c.334	p.L112fs	1.000	pfam_AML1/Runt_N,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	pfam_AML1/Runt_N,pfam_RunxI,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	-	no_errors	RUNX1	HGNC	ENSG00000159216	57	0	0.00	22	6	21.43	-	-	-
RXFP3	0	genome.wustl.edu	37	5	33937522	33937522	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	5	33937522	33937522	C	T	SNP	RXFP3	ENST00000330120	human	ensembl	69_37n	+1	known	missense	c.677	p.A226V	0.013	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Frt_met_rcpt	-	no_errors	RXFP3	HGNC	ENSG00000182631	34	0	0.00	13	8	38.10	-	-	-
SARDH	0	genome.wustl.edu	37	9	136531942	136531942	+	Missense_Mutation	SNP	A	A	C			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	9	136531942	136531942	A	C	SNP	SARDH	ENST00000371872	human	ensembl	69_37n	-1	known	missense	c.2546	p.V849G	1.000	pfam_GCV_T_C	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C	-	no_errors	SARDH	HGNC	ENSG00000123453	77	0	0.00	43	5	10.20	-	-	-
SERPINA1	0	genome.wustl.edu	37	14	94847276	94847276	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	14	94847276	94847276	T	-	DEL	SERPINA1	ENST00000355814	human	ensembl	69_37n	-1	known	frame_shift_del	c.849	p.K283fs	0.004	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINA1	HGNC	ENSG00000197249	238	0	0.00	111	39	25.66	-	-	-
SKOR1	0	genome.wustl.edu	37	15	68118648	68118648	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	15	68118648	68118648	G	A	SNP	SKOR1	ENST00000380035	human	ensembl	69_37n	+1	known	missense	c.482	p.R161H	1.000	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_Transform_Ski,pfam_c-SKI_SMAD4-bd_dom,superfamily_DNA-bd_dom_put,superfamily_SAND_dom-like	-	no_errors	SKOR1	HGNC	ENSG00000188779	22	0	0.00	23	11	32.35	-	-	-
SNX16	0	genome.wustl.edu	37	8	82751846	82751846	+	Splice_Site	DEL	C	C	-			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	8	82751846	82751846	C	-	DEL	SNX16	ENST00000345957	human	ensembl	69_37n	-1	known	splice_site_del	c.375+1	e1+1	1.000	-	-	-	no_errors	SNX16	HGNC	ENSG00000104497	172	0	0.00	122	17	12.23	-	-	-
SOCS7	0	genome.wustl.edu	37	17	36508490	36508490	+	Silent	SNP	A	A	G			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	17	36508490	36508490	A	G	SNP	SOCS7	ENST00000577233	human	ensembl	69_37n	+1	known	silent	c.363	p.E121	0.771	NULL	pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS7	HGNC	ENSG00000174111	8	0	0.00	4	22	84.62	-	-	-
SPTY2D1	0	genome.wustl.edu	37	11	18637556	18637556	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	11	18637556	18637556	T	C	SNP	SPTY2D1	ENST00000336349	human	ensembl	69_37n	-1	known	missense	c.265	p.T89A	1.000	NULL	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	-	no_errors	SPTY2D1	HGNC	ENSG00000179119	426	0	0.00	187	80	29.96	-	-	-
STARD7	0	genome.wustl.edu	37	2	96861224	96861224	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	2	96861224	96861224	C	G	SNP	STARD7	ENST00000337288	human	ensembl	69_37n	-1	known	missense	c.354	p.Q118H	0.039	NULL	pfam_START_lipid-bd,smart_START_lipid-bd,pfscan_START_lipid-bd	-	no_errors	STARD7	HGNC	ENSG00000084090	453	0	0.00	183	70	27.67	-	-	-
TDRD9	0	genome.wustl.edu	37	14	104492006	104492006	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	14	104492006	104492006	C	T	SNP	TDRD9	ENST00000409874	human	ensembl	69_37n	+1	known	missense	c.2824	p.P942S	0.864	pfam_Tudor	pfam_Helicase-assoc_dom,pfam_Tudor,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,smart_Tudor,pfscan_Tudor,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	TDRD9	HGNC	ENSG00000156414	169	0	0.00	100	30	23.08	-	-	-
TNRC6A	0	genome.wustl.edu	37	16	24801088	24801088	+	Silent	SNP	C	C	T			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	16	24801088	24801088	C	T	SNP	TNRC6A	ENST00000395799	human	ensembl	69_37n	+1	known	silent	c.1125	p.N375	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6A	HGNC	ENSG00000090905	137	0	0.00	77	19	19.79	-	-	-
TTN	0	genome.wustl.edu	37	2	179592332	179592332	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	2	179592332	179592332	G	C	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.16241	p.T5414S	0.991	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	92	0	0.00	56	17	23.29	-	-	-
ZNF239	0	genome.wustl.edu	37	10	44052156	44052156	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	10	44052156	44052156	G	A	SNP	ZNF239	ENST00000306006	human	ensembl	69_37n	-1	known	missense	c.1372	p.R458C	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF239	HGNC	ENSG00000196793	138	0	0.00	59	17	22.37	-	-	-
ZNF296	0	genome.wustl.edu	37	19	45574978	45574978	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A1AT-01A-11D-A12Q-09	TCGA-AR-A1AT-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e00d4fa-b951-44d8-8fbf-fc7b9f19772e	f4c41f30-2984-49b6-87a7-e27893a7fc71	19	45574978	45574978	C	A	SNP	ZNF296	ENST00000303809	human	ensembl	69_37n	-1	known	missense	c.1309	p.G437C	0.964	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF296	HGNC	ENSG00000170684	52	0	0.00	22	9	29.03	-	-	-
