Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA8	0	genome.wustl.edu	37	17	66899538	66899538	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	17	66899538	66899538	G	T	SNP	ABCA8	ENST00000430352	human	ensembl	69_37n	-1	known	missense	c.2501	p.T834K	0.000	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA8	HGNC	ENSG00000141338	128	1	0.78	72	68	48.57	-	-	-
ADAM17	0	genome.wustl.edu	37	2	9634772	9634772	+	Silent	SNP	G	G	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	2	9634772	9634772	G	A	SNP	ADAM17	ENST00000310823	human	ensembl	69_37n	-1	known	silent	c.1908	p.D636	1.000	NULL	pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM17	HGNC	ENSG00000151694	113	0	0.00	47	32	40.51	-	-	-
APOBR	0	genome.wustl.edu	37	16	28507445	28507445	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	16	28507445	28507445	G	C	SNP	APOBR	ENST00000564831	human	ensembl	69_37n	+1	known	missense	c.1083	p.E361D	0.310	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	14	0	0.00	33	9	21.43	-	-	-
BIRC7	0	genome.wustl.edu	37	20	61867655	61867655	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	20	61867655	61867655	G	T	SNP	BIRC7	ENST00000217169	human	ensembl	69_37n	+1	known	missense	c.207	p.E69D	0.000	NULL	pfam_BIR,smart_BIR,smart_Znf_RING,pfscan_BIR,pfscan_Znf_RING	-	no_errors	BIRC7	HGNC	ENSG00000101197	16	0	0.00	11	24	68.57	-	-	-
C19orf35	0	genome.wustl.edu	37	19	2276415	2276417	+	In_Frame_Del	DEL	TTG	TTG	-			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	19	2276415	2276417	TTG	-	DEL	C19orf35	ENST00000342063	human	ensembl	69_37n	-1	known	in_frame_del	c.686_684	p.N229in_frame_del	0.704:0.954:0.974	NULL	NULL	-	no_errors	C19orf35	HGNC	ENSG00000188305	10	0	0.00	0	3	100.00	-	-	-
C3orf15	0	genome.wustl.edu	37	3	119434580	119434580	+	Silent	SNP	G	G	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	3	119434580	119434580	G	A	SNP	C3orf15	ENST00000273390	human	ensembl	69_37n	+1	known	silent	c.672	p.T224	0.998	NULL	superfamily_S-AdoMet_deCO2ase_core	-	no_errors	C3orf15	HGNC	ENSG00000183833	88	0	0.00	16	81	83.51	-	-	-
C7orf57	0	genome.wustl.edu	37	7	48092459	48092459	+	Silent	SNP	T	T	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	7	48092459	48092459	T	A	SNP	C7orf57	ENST00000348904	human	ensembl	69_37n	+1	known	silent	c.768	p.G256	0.000	NULL	NULL	-	no_errors	C7orf57	HGNC	ENSG00000164746	35	0	0.00	30	9	23.08	-	-	-
CDH20	0	genome.wustl.edu	37	18	59166446	59166446	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	18	59166446	59166446	G	A	SNP	CDH20	ENST00000262717	human	ensembl	69_37n	+1	known	missense	c.274	p.G92R	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542	61	0	0.00	60	7	10.45	-	-	-
CNTN3	0	genome.wustl.edu	37	3	74535758	74535758	+	Missense_Mutation	SNP	A	A	C			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	3	74535758	74535758	A	C	SNP	CNTN3	ENST00000263665	human	ensembl	69_37n	-1	known	missense	c.207	p.I69M	0.002	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	CNTN3	HGNC	ENSG00000113805	83	0	0.00	82	13	13.68	-	-	-
CPNE6	0	genome.wustl.edu	37	14	24546220	24546220	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	14	24546220	24546220	C	T	SNP	CPNE6	ENST00000537691	human	ensembl	69_37n	+1	known	missense	c.1463	p.T488M	1.000	pfam_Copine,smart_VWF_A,pfscan_VWF_A	pfam_Copine,pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_VWF_A,pfscan_C2_membr_targeting,pfscan_VWF_A	-	no_errors	CPNE6	HGNC	ENSG00000100884	40	0	0.00	18	16	47.06	-	-	-
DCPS	0	genome.wustl.edu	37	11	126174159	126174159	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	11	126174159	126174159	A	T	SNP	DCPS	ENST00000263579	human	ensembl	69_37n	+1	known	missense	c.184	p.I62F	0.637	pfam_Scavenger_mRNA_decap_enz,superfamily_Scavenger_mRNA_decap_enz_N,pirsf_Scavenger_mRNA_decap_enz	pfam_Scavenger_mRNA_decap_enz,superfamily_HIT-like,superfamily_Scavenger_mRNA_decap_enz_N,pirsf_Scavenger_mRNA_decap_enz	-	no_errors	DCPS	HGNC	ENSG00000110063	47	0	0.00	3	25	89.29	-	-	-
DOK2	0	genome.wustl.edu	37	8	21769814	21769814	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	8	21769814	21769814	G	A	SNP	DOK2	ENST00000276420	human	ensembl	69_37n	-1	known	missense	c.271	p.R91C	0.998	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	DOK2	HGNC	ENSG00000147443	27	0	0.00	5	12	70.59	-	-	-
DPP4	0	genome.wustl.edu	37	2	162879282	162879282	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	2	162879282	162879282	T	C	SNP	DPP4	ENST00000360534	human	ensembl	69_37n	-1	known	missense	c.1051	p.T351A	0.790	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP4	HGNC	ENSG00000197635	231	0	0.00	93	59	38.82	-	-	-
DSG3	0	genome.wustl.edu	37	18	29036959	29036959	+	Missense_Mutation	SNP	A	A	C			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	18	29036959	29036959	A	C	SNP	DSG3	ENST00000257189	human	ensembl	69_37n	+1	known	missense	c.88	p.K30Q	0.067	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmo_cadherin	-	no_errors	DSG3	HGNC	ENSG00000134757	85	0	0.00	53	28	34.57	-	-	-
FAM83H	0	genome.wustl.edu	37	8	144811162	144811162	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	8	144811162	144811162	C	T	SNP	FAM83H	ENST00000388913	human	ensembl	69_37n	-1	known	missense	c.712	p.A238T	0.991	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83H	HGNC	ENSG00000180921	39	0	0.00	24	53	68.83	-	-	-
FCGBP	0	genome.wustl.edu	37	19	40419909	40419909	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	19	40419909	40419909	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	69_37n	-1	known	missense	c.3085	p.G1029R	0.890	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	64	0	0.00	30	33	52.38	-	-	-
GJD2	0	genome.wustl.edu	37	15	35044895	35044895	+	Silent	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	15	35044895	35044895	C	T	SNP	GJD2	ENST00000290374	human	ensembl	69_37n	-1	known	silent	c.750	p.K250	1.000	pfam_Connexin_CCC,prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin36	-	no_errors	GJD2	HGNC	ENSG00000159248	109	0	0.00	51	29	36.25	-	-	-
HHIPL2	0	genome.wustl.edu	37	1	222717378	222717378	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	1	222717378	222717378	C	T	SNP	HHIPL2	ENST00000343410	human	ensembl	69_37n	-1	known	missense	c.475	p.E159K	0.022	pfam_Folate_rcpt-like,superfamily_Saposin-like	pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Quinoprot_gluc/sorb_DH,superfamily_Saposin-like	-	no_errors	HHIPL2	HGNC	ENSG00000143512	56	0	0.00	51	55	51.89	-	-	-
IL12RB1	0	genome.wustl.edu	37	19	18174806	18174806	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	19	18174806	18174806	G	T	SNP	IL12RB1	ENST00000430026	human	ensembl	69_37n	-1	known	missense	c.1498	p.P500T	0.125	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB1	HGNC	ENSG00000096996	46	0	0.00	35	4	10.26	-	-	-
IL22RA2	0	genome.wustl.edu	37	6	137477933	137477933	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	6	137477933	137477933	T	-	DEL	IL22RA2	ENST00000296980	human	ensembl	69_37n	-1	known	frame_shift_del	c.256	p.I86fs	0.002	superfamily_Fibronectin_type3	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3	-	no_errors	IL22RA2	HGNC	ENSG00000164485	115	0	0.00	104	26	19.55	-	-	-
LARP1	0	genome.wustl.edu	37	5	154172349	154172349	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	5	154172349	154172349	G	A	SNP	LARP1	ENST00000517616	human	ensembl	69_37n	+1	putative	missense	c.439	p.E147K	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon	LARP1	HGNC	ENSG00000155506	90	0	0.00	82	57	41.01	-	-	-
NOX4	0	genome.wustl.edu	37	11	89075271	89075271	+	Silent	SNP	A	A	G			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	11	89075271	89075271	A	G	SNP	NOX4	ENST00000413594	human	ensembl	69_37n	-1	known	silent	c.1371	p.T457	0.993	pfam_Fe_red_NAD-bd_6,prints_Cyt_b245_heavy_chain	pfam_Fe_red_NAD-bd_6,pfam_Fe3_Rdtase_TM_dom,pfam_FAD-bd_8,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX4	HGNC	ENSG00000086991	62	0	0.00	9	24	72.73	-	-	-
NTNG2	0	genome.wustl.edu	37	9	135073544	135073544	+	Silent	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	9	135073544	135073544	C	T	SNP	NTNG2	ENST00000360670	human	ensembl	69_37n	+1	known	silent	c.405	p.D135	0.988	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_N,pfam_EGF_laminin,pfam_EGF_extracell,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	NTNG2	HGNC	ENSG00000196358	31	0	0.00	25	4	13.79	-	-	-
OR5AC2	0	genome.wustl.edu	37	3	97806718	97806718	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	3	97806718	97806718	G	T	SNP	OR5AC2	ENST00000358642	human	ensembl	69_37n	+1	known	missense	c.702	p.K234N	0.065	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5AC2	HGNC	ENSG00000196578	54	0	0.00	38	20	34.48	-	-	-
OTOA	0	genome.wustl.edu	37	16	21716591	21716591	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	16	21716591	21716591	G	T	SNP	OTOA	ENST00000286149	human	ensembl	69_37n	+1	known	missense	c.1124	p.G375V	1.000	NULL	NULL	-	no_errors	OTOA	HGNC	ENSG00000155719	71	0	0.00	59	45	43.27	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	64	0	0.00	15	74	83.15	-	-	-
RHOC	0	genome.wustl.edu	37	1	113244320	113244320	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	1	113244320	113244320	C	T	SNP	RHOC	ENST00000285735	human	ensembl	69_37n	-1	known	missense	c.424	p.E142K	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOC	HGNC	ENSG00000155366	58	0	0.00	21	22	51.16	-	-	-
SCN4A	0	genome.wustl.edu	37	17	62019025	62019025	+	Silent	SNP	G	G	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	17	62019025	62019025	G	A	SNP	SCN4A	ENST00000435607	human	ensembl	69_37n	-1	known	silent	c.4617	p.D1539	0.662	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN4A	HGNC	ENSG00000007314	36	0	0.00	49	25	33.78	-	-	-
STX17	0	genome.wustl.edu	37	9	102730740	102730740	+	Silent	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	9	102730740	102730740	C	T	SNP	STX17	ENST00000259400	human	ensembl	69_37n	+1	known	silent	c.694	p.L232	1.000	NULL	pfam_T_SNARE_dom,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX17	HGNC	ENSG00000136874	60	0	0.00	37	26	41.27	-	-	-
SYNE1	0	genome.wustl.edu	37	6	152668216	152668216	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	6	152668216	152668216	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	69_37n	-1	known	missense	c.12056	p.A4019V	1.000	superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	159	0	0.00	146	33	18.44	-	-	-
TLX2	0	genome.wustl.edu	37	2	74742786	74742786	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	2	74742786	74742786	C	T	SNP	TLX2	ENST00000233638	human	ensembl	69_37n	+1	known	missense	c.427	p.R143C	1.000	superfamily_Homeodomain-like	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	TLX2	HGNC	ENSG00000115297	44	0	0.00	31	8	20.51	-	-	-
TMPRSS6	0	genome.wustl.edu	37	22	37482346	37482346	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	22	37482346	37482346	G	A	SNP	TMPRSS6	ENST00000381792	human	ensembl	69_37n	-1	known	missense	c.950	p.S317F	1.000	pirsf_Pept_S1A_matriptase-2,superfamily_CUB	pirsf_Pept_S1A_matriptase-2,pfam_Peptidase_S1_S6,pfam_LDrepeatLR_classA_rpt,pfam_SEA,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,superfamily_CUB,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_CUB,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1_S6	-	no_errors	TMPRSS6	HGNC	ENSG00000187045	36	0	0.00	10	14	58.33	-	-	-
WDR13	0	genome.wustl.edu	37	X	48458037	48458037	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	X	48458037	48458037	C	T	SNP	WDR13	ENST00000218056	human	ensembl	69_37n	+1	known	missense	c.455	p.T152M	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR13	HGNC	ENSG00000101940	60	0	0.00	45	21	31.82	-	-	-
ZDHHC9	0	genome.wustl.edu	37	X	128975839	128975839	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	X	128975839	128975839	C	T	SNP	ZDHHC9	ENST00000357166	human	ensembl	69_37n	-1	known	missense	c.83	p.R28H	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC9	HGNC	ENSG00000188706	118	0	0.00	107	31	22.46	-	-	-
ZFAND4	0	genome.wustl.edu	37	10	46122444	46122444	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	10	46122444	46122444	C	G	SNP	ZFAND4	ENST00000344646	human	ensembl	69_37n	-1	known	missense	c.827	p.G276A	1.000	NULL	pfam_Ubiquitin,pfam_Znf_AN1,smart_Ubiquitin,smart_Znf_AN1,prints_Ubiquitin_subgr,pfscan_Znf_AN1,pfscan_Ubiquitin_supergroup	-	no_errors	ZFAND4	HGNC	ENSG00000172671	33	0	0.00	21	8	27.59	-	-	-
ZIC3	0	genome.wustl.edu	37	X	136649099	136649099	+	Silent	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	X	136649099	136649099	C	T	SNP	ZIC3	ENST00000287538	human	ensembl	69_37n	+1	known	silent	c.249	p.N83	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC3	HGNC	ENSG00000156925	25	0	0.00	10	16	61.54	-	-	-
ZNF645	0	genome.wustl.edu	37	X	22291800	22291800	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	X	22291800	22291800	T	A	SNP	ZNF645	ENST00000323684	human	ensembl	69_37n	+1	known	missense	c.692	p.F231Y	0.039	NULL	pfscan_Znf_RING,pfscan_Znf_C2H2	-	no_errors	ZNF645	HGNC	ENSG00000175809	27	0	0.00	28	5	15.15	-	-	-
ZSCAN21	0	genome.wustl.edu	37	7	99654807	99654807	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AR-A2LK-01A-11D-A17W-09	TCGA-AR-A2LK-10A-01D-A17W-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7b0b60c7-5fa0-440e-937f-8d82119330d6	adfefa9c-2e3e-444d-8018-f364999f5f42	7	99654807	99654807	C	T	SNP	ZSCAN21	ENST00000292450	human	ensembl	69_37n	+1	known	nonsense	c.178	p.R60*	0.985	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN21	HGNC	ENSG00000166529	36	0	0.00	28	11	28.21	-	-	-
