Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABRA	0	genome.wustl.edu	37	8	107782189	107782189	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	8	107782189	107782189	C	A	SNP	ABRA	ENST00000311955	human	ensembl	69_37n	-1	known	missense	c.230	p.S77I	0.000	NULL	NULL	-	no_errors	ABRA	HGNC	ENSG00000174429	136	0	0.00	340	70	17.03	-	-	-
ADAMTS12	0	genome.wustl.edu	37	5	33576497	33576497	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	5	33576497	33576497	G	A	SNP	ADAMTS12	ENST00000504830	human	ensembl	69_37n	-1	known	missense	c.3634	p.P1212S	0.000	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS12	HGNC	ENSG00000151388	268	1	0.37	268	32	10.67	-	-	-
ADAMTSL1	0	genome.wustl.edu	37	9	18776871	18776871	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	9	18776871	18776871	G	A	SNP	ADAMTSL1	ENST00000380548	human	ensembl	69_37n	+1	novel	missense	c.2644	p.V882M	0.171	pfscan_Ig-like	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	16	0	0.00	10	13	56.52	-	-	-
APOL5	0	genome.wustl.edu	37	22	36116635	36116635	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	22	36116635	36116635	G	A	SNP	APOL5	ENST00000249044	human	ensembl	69_37n	+1	known	missense	c.76	p.E26K	0.000	NULL	pfam_ApoL	-	no_errors	APOL5	HGNC	ENSG00000128313	98	0	0.00	145	46	24.08	-	-	-
DBC1	0	genome.wustl.edu	37	9	121930047	121930047	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	9	121930047	121930047	C	T	SNP	DBC1	ENST00000265922	human	ensembl	69_37n	-1	known	missense	c.1601	p.R534H	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	DBC1	HGNC	ENSG00000078725	111	0	0.00	68	55	44.72	-	-	-
DNAI2	0	genome.wustl.edu	37	17	72283239	72283239	+	Splice_Site	DEL	T	T	-			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	17	72283239	72283239	T	-	DEL	DNAI2	ENST00000311014	human	ensembl	69_37n	+1	known	splice_site_del	c.467+2	e3+2	1.000	-	-	-	no_errors	DNAI2	HGNC	ENSG00000171595	60	0	0.00	121	465	75.61	-	-	-
ENSG00000226232	0	genome.wustl.edu	37	16	70010517	70010519	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	16	70010517	70010519	TGT	-	DEL	ENSG00000226232	ENST00000532298	human	ensembl	69_37n	-1	novel	in_frame_del	c.761_759	p.Q253in_frame_del	0.600:0.610:0.620	pfam_NPIP	pfam_NPIP	-	no_errors	RP11-419C5.2	Clone_based_vega_gene	ENSG00000226232	11	0	0.00	8	5	38.46	-	-	-
GJD3	0	genome.wustl.edu	37	17	38519722	38519722	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	17	38519722	38519722	C	A	SNP	GJD3	ENST00000337376	human	ensembl	69_37n	-1	known	nonsense	c.346	p.G116*	0.000	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJD3	HGNC	ENSG00000183153	11	0	0.00	3	5	62.50	-	-	-
GPR1	0	genome.wustl.edu	37	2	207041836	207041836	+	Missense_Mutation	SNP	A	A	C			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	2	207041836	207041836	A	C	SNP	GPR1	ENST00000407325	human	ensembl	69_37n	-1	known	missense	c.136	p.C46G	0.011	prints_7TM_GPCR_Rhodpsn,prints_ATII_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_GPR1_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Frt_met_rcpt,prints_ATII_rcpt	-	no_errors	GPR1	HGNC	ENSG00000183671	119	0	0.00	177	46	20.63	-	-	-
GUCY2D	0	genome.wustl.edu	37	17	7910008	7910008	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	17	7910008	7910008	G	A	SNP	GUCY2D	ENST00000254854	human	ensembl	69_37n	+1	known	missense	c.1354	p.D452N	0.981	NULL	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Haem_no_assoc-bd,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	GUCY2D	HGNC	ENSG00000132518	31	0	0.00	22	4	15.38	-	-	-
HECTD4	0	genome.wustl.edu	37	12	112600859	112600860	+	Frame_Shift_Ins	INS	-	-	G			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	12	112600859	112600860	-	G	INS	HECTD4	ENST00000377560	human	ensembl	69_37n	-1	known	frame_shift_ins	c.12591_12590	p.D4198fs	0.555:1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	33	0	0.00	33	4	10.81	-	-	-
IL1RN	0	genome.wustl.edu	37	2	113888708	113888708	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	2	113888708	113888708	G	T	SNP	IL1RN	ENST00000259206	human	ensembl	69_37n	+1	known	missense	c.301	p.G101C	0.976	pfam_Interleukin_1,superfamily_Cytokine_IL1-like,smart_Interleukin_1,prints_IL_rcpt_IL1RA,prints_Interleukin_1	pfam_Interleukin_1,superfamily_Cytokine_IL1-like,smart_Interleukin_1,prints_IL_rcpt_IL1RA,prints_Interleukin_1	-	no_errors	IL1RN	HGNC	ENSG00000136689	82	0	0.00	106	52	32.91	-	-	-
KIF2A	0	genome.wustl.edu	37	5	61668293	61668293	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	5	61668293	61668293	G	C	SNP	KIF2A	ENST00000407818	human	ensembl	69_37n	+1	known	missense	c.1675	p.D559H	1.000	smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2A	HGNC	ENSG00000068796	217	0	0.00	123	108	46.75	-	-	-
LCT	0	genome.wustl.edu	37	2	136564944	136564945	+	Frame_Shift_Ins	INS	-	-	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	2	136564944	136564945	-	A	INS	LCT	ENST00000264162	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3927_3926	p.L1310fs	0.983:0.976	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	51	0	0.00	72	30	29.41	-	-	-
LRRC43	0	genome.wustl.edu	37	12	122685345	122685346	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	12	122685345	122685346	-	C	INS	LRRC43	ENST00000339777	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1673_1674	p.I561fs	1.000:0.997	NULL	NULL	-	no_errors	LRRC43	HGNC	ENSG00000158113	30	0	0.00	26	3	10.34	-	-	-
LTF	0	genome.wustl.edu	37	3	46492156	46492156	+	Silent	SNP	C	C	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	3	46492156	46492156	C	T	SNP	LTF	ENST00000231751	human	ensembl	69_37n	-1	known	silent	c.711	p.L237	0.989	pfam_Peptidase_S60,smart_Peptidase_S60,pirsf_Transferrin	pfam_Peptidase_S60,smart_Peptidase_S60,pirsf_Transferrin,prints_Peptidase_S60	-	no_errors	LTF	HGNC	ENSG00000012223	85	0	0.00	61	10	14.08	-	-	-
MUC4	0	genome.wustl.edu	37	3	195497194	195497194	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	3	195497194	195497194	C	T	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.13291	p.E4431K	0.989	smart_Nidogen_extracell_dom	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	36	0	0.00	78	24	23.30	-	-	-
MUC4	0	genome.wustl.edu	37	3	195510725	195510725	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	3	195510725	195510725	G	A	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.7726	p.P2576S	0.025	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	29	0	0.00	31	5	13.89	-	-	-
MYO5B	0	genome.wustl.edu	37	18	47352891	47352891	+	Missense_Mutation	SNP	A	A	C			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	18	47352891	47352891	A	C	SNP	MYO5B	ENST00000285039	human	ensembl	69_37n	-1	known	missense	c.5497	p.S1833A	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306	234	0	0.00	203	78	27.76	-	-	-
NLK	0	genome.wustl.edu	37	17	26495615	26495615	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	17	26495615	26495615	G	A	SNP	NLK	ENST00000407008	human	ensembl	69_37n	+1	known	missense	c.979	p.V327M	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	NLK	HGNC	ENSG00000087095	117	0	0.00	78	36	31.58	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	75	0	0.00	115	31	21.23	-	-	-
PRAMEF13	0	genome.wustl.edu	37	1	13448451	13448451	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	1	13448451	13448451	C	G	SNP	PRAMEF13	ENST00000376132	human	ensembl	69_37n	-1	known	missense	c.1024	p.A342P	0.001	NULL	NULL	-	no_errors	PRAMEF13	HGNC	ENSG00000204495	150	0	0.00	136	40	22.73	-	-	-
PRICKLE1	0	genome.wustl.edu	37	12	42853698	42853698	+	Silent	SNP	A	A	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	12	42853698	42853698	A	T	SNP	PRICKLE1	ENST00000345127	human	ensembl	69_37n	-1	known	silent	c.2409	p.S803	0.043	NULL	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE1	HGNC	ENSG00000139174	385	0	0.00	372	187	33.45	-	-	-
RIC8A	0	genome.wustl.edu	37	11	212869	212869	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	11	212869	212869	A	G	SNP	RIC8A	ENST00000325207	human	ensembl	69_37n	+1	known	missense	c.1261	p.N421D	1.000	pfam_Gua_nucleotide_exch_fac_Ric8,prints_Synembryn	pfam_Gua_nucleotide_exch_fac_Ric8,superfamily_ARM-type_fold,prints_Synembryn	-	no_errors	RIC8A	HGNC	ENSG00000177963	40	0	0.00	14	13	48.15	-	-	-
ROR1	0	genome.wustl.edu	37	1	64643348	64643348	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	1	64643348	64643348	G	A	SNP	ROR1	ENST00000371079	human	ensembl	69_37n	+1	known	missense	c.1624	p.V542I	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	ROR1	HGNC	ENSG00000185483	108	0	0.00	99	52	34.44	-	-	-
RTTN	0	genome.wustl.edu	37	18	67863738	67863738	+	Silent	SNP	G	G	A			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	18	67863738	67863738	G	A	SNP	RTTN	ENST00000255674	human	ensembl	69_37n	-1	known	silent	c.840	p.H280	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225	127	0	0.00	138	44	24.18	-	-	-
SKIV2L	0	genome.wustl.edu	37	6	31937382	31937383	+	Frame_Shift_Ins	INS	-	-	G			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	6	31937382	31937383	-	G	INS	SKIV2L	ENST00000375394	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3631_3632	p.A1213fs	1.000:1.000	pfam_DSH_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1	pfam_DSH_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SKIV2L	HGNC	ENSG00000204351	19	0	0.00	16	3	15.79	-	-	-
TBC1D2B	0	genome.wustl.edu	37	15	78316850	78316850	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	15	78316850	78316850	C	T	SNP	TBC1D2B	ENST00000300584	human	ensembl	69_37n	-1	known	missense	c.1118	p.R373Q	0.992	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Prefoldin,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2B	HGNC	ENSG00000167202	91	0	0.00	110	16	12.70	-	-	-
TP53	0	genome.wustl.edu	37	17	7577018	7577018	+	Splice_Site	SNP	C	C	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	17	7577018	7577018	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	splice_site	c.919+1	e7+1	0.976	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	347	0	0.00	170	143	45.69	-	-	-
VPS39	0	genome.wustl.edu	37	15	42458983	42458983	+	Silent	SNP	C	C	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	15	42458983	42458983	C	T	SNP	VPS39	ENST00000348544	human	ensembl	69_37n	-1	known	silent	c.1539	p.G513	1.000	pfam_VPS39/TGF_beta_rcpt-assoc_1,pfam_Clathrin_H-chain/VPS_repeat	pfam_Citron,pfam_VPS39/TGF_beta_rcpt-assoc_2,pfam_VPS39/TGF_beta_rcpt-assoc_1,pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,smart_Citron	-	no_errors	VPS39	HGNC	ENSG00000166887	122	0	0.00	112	56	33.14	-	-	-
ZNF3	0	genome.wustl.edu	37	7	99673193	99673193	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	7	99673193	99673193	G	C	SNP	ZNF3	ENST00000299667	human	ensembl	69_37n	-1	known	missense	c.116	p.A39G	1.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF3	HGNC	ENSG00000166526	341	0	0.00	300	123	29.08	-	-	-
ZNF439	0	genome.wustl.edu	37	19	11979022	11979022	+	Nonsense_Mutation	SNP	A	A	T			TCGA-B6-A0IE-01A-11W-A050-09	TCGA-B6-A0IE-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4cb39f50-5031-4b08-baa3-1a366ada6514	513424ac-0f6a-498a-b610-34f825d7dc63	19	11979022	11979022	A	T	SNP	ZNF439	ENST00000304030	human	ensembl	69_37n	+1	known	nonsense	c.1138	p.K380*	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF439	HGNC	ENSG00000171291	125	0	0.00	104	51	32.90	-	-	-
