Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC12	0	genome.wustl.edu	37	16	48149418	48149418	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	16	48149418	48149418	C	T	SNP	ABCC12	ENST00000311303	human	ensembl	69_37n	-1	known	missense	c.1897	p.V633M	0.994	smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCC12	HGNC	ENSG00000140798	131	0	0.00	29	11	27.50	-	-	-
ABL1	0	genome.wustl.edu	37	9	133750254	133750254	+	Splice_Site	SNP	G	G	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	9	133750254	133750254	G	C	SNP	ABL1	ENST00000372348	human	ensembl	69_37n	+1	known	splice_site	c.1143-1	e7-1	1.000	-	-	-	no_errors	ABL1	HGNC	ENSG00000097007	157	0	0.00	50	18	26.47	-	-	-
ADCY2	0	genome.wustl.edu	37	5	7802447	7802447	+	Silent	SNP	C	C	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	5	7802447	7802447	C	G	SNP	ADCY2	ENST00000338316	human	ensembl	69_37n	+1	known	silent	c.2745	p.L915	0.999	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY2	HGNC	ENSG00000078295	161	0	0.00	50	25	33.33	-	-	-
ADD1	0	genome.wustl.edu	37	4	2930220	2930220	+	Silent	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	4	2930220	2930220	G	A	SNP	ADD1	ENST00000264758	human	ensembl	69_37n	+1	known	silent	c.2277	p.L759	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD1	HGNC	ENSG00000087274	37	0	0.00	26	6	18.75	-	-	-
AKAP9	0	genome.wustl.edu	37	7	91712715	91712715	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	7	91712715	91712715	C	G	SNP	AKAP9	ENST00000359028	human	ensembl	69_37n	+1	known	missense	c.8428	p.L2810V	0.124	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB-like	-	no_errors	AKAP9	HGNC	ENSG00000127914	93	0	0.00	79	45	36.29	-	-	-
ALOX12	0	genome.wustl.edu	37	17	6902773	6902773	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	6902773	6902773	G	C	SNP	ALOX12	ENST00000251535	human	ensembl	69_37n	+1	known	missense	c.795	p.E265D	0.981	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_LipOase_LH2,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_LipOase_LH2,prints_LipOase_mml,prints_LipOase_C,pfscan_LipOase_LH2	-	no_errors	ALOX12	HGNC	ENSG00000108839	189	0	0.00	43	23	34.85	-	-	-
ANAPC7	0	genome.wustl.edu	37	12	110832986	110832986	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	12	110832986	110832986	C	T	SNP	ANAPC7	ENST00000455511	human	ensembl	69_37n	-1	known	missense	c.430	p.E144K	1.000	NULL	pfam_TPR_2,pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ANAPC7	HGNC	ENSG00000196510	298	0	0.00	270	67	19.88	-	-	-
AOC4	0	genome.wustl.edu	37	17	41020257	41020257	+	RNA	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	41020257	41020257	G	A	SNP	AOC4	ENST00000585538	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AOC4	Clone_based_vega_gene	ENSG00000260105	109	0	0.00	23	7	23.33	-	-	-
ARID2	0	genome.wustl.edu	37	12	46211464	46211464	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	12	46211464	46211464	C	T	SNP	ARID2	ENST00000334344	human	ensembl	69_37n	+1	known	nonsense	c.430	p.Q144*	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079	123	0	0.00	92	36	28.12	-	-	-
ATM	0	genome.wustl.edu	37	11	108186737	108186737	+	Splice_Site	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	11	108186737	108186737	G	A	SNP	ATM	ENST00000278616	human	ensembl	69_37n	+1	known	splice_site	c.6096-1	e41-1	1.000	-	-	-	no_errors	ATM	HGNC	ENSG00000149311	190	0	0.00	91	32	25.81	-	-	-
C14orf38	0	genome.wustl.edu	37	14	60031832	60031832	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	14	60031832	60031832	T	C	SNP	C14orf38	ENST00000281581	human	ensembl	69_37n	-1	known	missense	c.653	p.E218G	0.007	NULL	superfamily_Prefoldin	-	no_errors	C14orf38	HGNC	ENSG00000151838	635	1	0.16	596	166	21.78	-	-	-
C7orf66	0	genome.wustl.edu	37	7	108524578	108524578	+	Silent	SNP	C	C	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	7	108524578	108524578	C	G	SNP	C7orf66	ENST00000379007	human	ensembl	69_37n	-1	putative	silent	c.12	p.V4	0.000	NULL	NULL	-	no_errors	C7orf66	HGNC	ENSG00000205174	200	0	0.00	107	74	40.88	-	-	-
CACNA1D	0	genome.wustl.edu	37	3	53839094	53839094	+	Silent	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	3	53839094	53839094	C	T	SNP	CACNA1D	ENST00000288139	human	ensembl	69_37n	+1	known	silent	c.5730	p.F1910	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388	87	0	0.00	39	5	11.36	-	-	-
CACNA1G	0	genome.wustl.edu	37	17	48681624	48681624	+	Silent	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	48681624	48681624	C	T	SNP	CACNA1G	ENST00000359106	human	ensembl	69_37n	+1	known	silent	c.4278	p.F1426	0.997	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	301	0	0.00	110	19	14.62	-	-	-
CDK1	0	genome.wustl.edu	37	10	62553685	62553685	+	Silent	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	10	62553685	62553685	G	A	SNP	CDK1	ENST00000395284	human	ensembl	69_37n	+1	known	silent	c.846	p.L282	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK1	HGNC	ENSG00000170312	113	0	0.00	107	22	17.05	-	-	-
CST5	0	genome.wustl.edu	37	20	23860130	23860130	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	20	23860130	23860130	C	T	SNP	CST5	ENST00000304710	human	ensembl	69_37n	-1	known	missense	c.184	p.D62N	0.001	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST5	HGNC	ENSG00000170367	144	0	0.00	34	11	24.44	-	-	-
DNALI1	0	genome.wustl.edu	37	1	38024964	38024964	+	Frame_Shift_Del	DEL	G	G	-			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	1	38024964	38024964	G	-	DEL	DNALI1	ENST00000296218	human	ensembl	69_37n	+1	known	frame_shift_del	c.330	p.V111fs	1.000	pfam_Axonemal_dynein_light_chain	pfam_Axonemal_dynein_light_chain	-	no_errors	DNALI1	HGNC	ENSG00000163879	35	0	0.00	9	2	18.18	-	-	-
ELP5	0	genome.wustl.edu	37	17	7158001	7158001	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	7158001	7158001	G	C	SNP	ELP5	ENST00000354429	human	ensembl	69_37n	+1	known	missense	c.336	p.K112N	0.000	pfam_Histone_acetylation_protein_2	pfam_Histone_acetylation_protein_2	-	no_errors	ELP5	HGNC	ENSG00000170291	135	0	0.00	30	11	26.83	-	-	-
EXOC3	0	genome.wustl.edu	37	5	446329	446329	+	Silent	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	5	446329	446329	G	A	SNP	EXOC3	ENST00000315013	human	ensembl	69_37n	+1	known	silent	c.9	p.E3	1.000	NULL	pfam_Sec6	-	no_errors	EXOC3	HGNC	ENSG00000180104	104	0	0.00	34	9	20.93	-	-	-
FAR1	0	genome.wustl.edu	37	11	13721953	13721953	+	Silent	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	11	13721953	13721953	C	T	SNP	FAR1	ENST00000354817	human	ensembl	69_37n	+1	known	silent	c.279	p.L93	0.730	pfam_Male_sterile_NAD-bd,pfam_Epimerase_deHydtase	pfam_Male_sterile_NAD-bd,pfam_Malesterile,pfam_Epimerase_deHydtase	-	no_errors	FAR1	HGNC	ENSG00000197601	144	1	0.69	89	16	15.24	-	-	-
FRMPD2	0	genome.wustl.edu	37	10	49379163	49379163	+	Silent	SNP	G	G	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	10	49379163	49379163	G	C	SNP	FRMPD2	ENST00000374201	human	ensembl	69_37n	-1	known	silent	c.3312	p.L1104	0.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_PDZ,superfamily_FERM_central,superfamily_Kinase-like_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,pfscan_FERM_domain,pfscan_PDZ,prints_Band_41_fam	-	no_errors	FRMPD2	HGNC	ENSG00000170324	97	0	0.00	78	15	16.13	-	-	-
GMDS	0	genome.wustl.edu	37	6	2124947	2124947	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	6	2124947	2124947	C	G	SNP	GMDS	ENST00000380815	human	ensembl	69_37n	-1	known	missense	c.121	p.E41Q	1.000	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct,tigrfam_GDP_Man_deHydtase	pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct,tigrfam_GDP_Man_deHydtase	-	no_errors	GMDS	HGNC	ENSG00000112699	163	0	0.00	66	11	14.29	-	-	-
GRIA1	0	genome.wustl.edu	37	5	153065794	153065794	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	5	153065794	153065794	G	C	SNP	GRIA1	ENST00000448073	human	ensembl	69_37n	+1	known	missense	c.1069	p.E357Q	1.000	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511	131	0	0.00	90	17	15.89	-	-	-
HIPK1	0	genome.wustl.edu	37	1	114483438	114483438	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	1	114483438	114483438	C	G	SNP	HIPK1	ENST00000369558	human	ensembl	69_37n	+1	known	missense	c.433	p.L145V	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	HIPK1	HGNC	ENSG00000163349	28	0	0.00	14	7	33.33	-	-	-
IFIH1	0	genome.wustl.edu	37	2	163128799	163128799	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	163128799	163128799	C	G	SNP	IFIH1	ENST00000263642	human	ensembl	69_37n	-1	known	missense	c.2553	p.E851D	1.000	pfscan_Helicase_C	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_CARD,superfamily_DEATH-like,superfamily_ARM-type_fold,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	IFIH1	HGNC	ENSG00000115267	247	0	0.00	163	31	15.98	-	-	-
IKBKE	0	genome.wustl.edu	37	1	206658614	206658614	+	Silent	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	1	206658614	206658614	G	A	SNP	IKBKE	ENST00000367120	human	ensembl	69_37n	+1	known	silent	c.1587	p.K529	0.997	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	IKBKE	HGNC	ENSG00000143466	92	0	0.00	24	6	20.00	-	-	-
INTS8	0	genome.wustl.edu	37	8	95884207	95884207	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	8	95884207	95884207	T	C	SNP	INTS8	ENST00000523731	human	ensembl	69_37n	+1	known	missense	c.2510	p.I837T	1.000	NULL	NULL	-	no_errors	INTS8	HGNC	ENSG00000164941	199	0	0.00	212	42	16.54	-	-	-
JAGN1	0	genome.wustl.edu	37	3	9934708	9934708	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	3	9934708	9934708	C	T	SNP	JAGN1	ENST00000307768	human	ensembl	69_37n	+1	known	nonsense	c.199	p.Q67*	0.986	pfam_DUF1352	pfam_DUF1352	-	no_errors	JAGN1	HGNC	ENSG00000171135	246	0	0.00	96	30	23.81	-	-	-
KCNQ2	0	genome.wustl.edu	37	20	62078142	62078142	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	20	62078142	62078142	G	C	SNP	KCNQ2	ENST00000354587	human	ensembl	69_37n	-1	known	missense	c.345	p.I115M	1.000	prints_K_chnl_volt-dep_KCNQ2	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl_volt-dep_KCNQ2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ2	HGNC	ENSG00000075043	61	0	0.00	18	5	21.74	-	-	-
MAP2K4	0	genome.wustl.edu	37	17	12043202	12043202	+	Splice_Site	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	12043202	12043202	G	A	SNP	MAP2K4	ENST00000415385	human	ensembl	69_37n	+1	known	splice_site	c.1119+1	e11+1	1.000	-	-	-	no_errors	MAP2K4	HGNC	ENSG00000065559	209	0	0.00	119	33	21.71	-	-	-
NCKAP5	0	genome.wustl.edu	37	2	133541462	133541462	+	Silent	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	133541462	133541462	C	T	SNP	NCKAP5	ENST00000317721	human	ensembl	69_37n	-1	known	silent	c.2922	p.L974	1.000	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	16	0	0.00	18	4	18.18	-	-	-
NDNL2	0	genome.wustl.edu	37	15	29561355	29561355	+	Silent	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	15	29561355	29561355	G	A	SNP	NDNL2	ENST00000332303	human	ensembl	69_37n	-1	known	silent	c.555	p.L185	0.960	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	NDNL2	HGNC	ENSG00000185115	100	0	0.00	37	10	21.28	-	-	-
NEB	0	genome.wustl.edu	37	2	152406191	152406191	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	152406191	152406191	G	C	SNP	NEB	ENST00000397345	human	ensembl	69_37n	-1	known	missense	c.20008	p.H6670D	0.511	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom_bac,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,prints_Nebulin,pfscan_Nebulin_35r-motif,pfscan_SH3_domain	-	no_errors	NEB	HGNC	ENSG00000183091	405	0	0.00	143	45	23.94	-	-	-
PDZD2	0	genome.wustl.edu	37	5	32101067	32101070	+	Splice_Site	DEL	TAAG	TAAG	-			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	TAAG	TAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	5	32101067	32101070	TAAG	-	DEL	PDZD2	ENST00000397559	human	ensembl	69_37n	+1	known	splice_site_del	c.NULL	NULL	0.001:0.002:0.002:0.001	-	-	-	no_errors	PDZD2	HGNC	ENSG00000133401	24	0	0.00	5	3	37.50	-	-	-
RGPD3	0	genome.wustl.edu	37	2	107042506	107042506	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	107042506	107042506	G	A	SNP	RGPD3	ENST00000304514	human	ensembl	69_37n	-1	known	missense	c.2644	p.P882S	1.000	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC	ENSG00000153165	300	0	0.00	321	45	12.30	-	-	-
RRM2	0	genome.wustl.edu	37	2	10269010	10269010	+	Silent	SNP	A	A	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	2	10269010	10269010	A	G	SNP	RRM2	ENST00000360566	human	ensembl	69_37n	+1	known	silent	c.1014	p.K338	0.998	pfam_Ribonucl_Rdtase_small,superfamily_Ferritin/RR-like	pfam_Ribonucl_Rdtase_small,superfamily_Ferritin/RR-like	-	no_errors	RRM2	HGNC	ENSG00000171848	229	0	0.00	229	63	21.58	-	-	-
SALL2	0	genome.wustl.edu	37	14	21992915	21992915	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	14	21992915	21992915	G	A	SNP	SALL2	ENST00000327430	human	ensembl	69_37n	-1	known	missense	c.947	p.S316L	0.047	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL2	HGNC	ENSG00000165821	69	0	0.00	23	10	30.30	-	-	-
SEPT1	0	genome.wustl.edu	37	16	30393617	30393617	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	16	30393617	30393617	C	G	SNP	SEPT1	ENST00000321367	human	ensembl	69_37n	-1	known	missense	c.88	p.D30H	1.000	pfam_Cell_div_GTP-bd,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,pirsf_Septin	-	no_errors	SEPT1	HGNC	ENSG00000180096	138	0	0.00	28	16	36.36	-	-	-
SLFN12L	0	genome.wustl.edu	37	17	33807200	33807200	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	17	33807200	33807200	C	T	SNP	SLFN12L	ENST00000449046	human	ensembl	69_37n	-1	known	missense	c.122	p.R41H	0.078	NULL	pfam_ATPase_AAA-4	-	no_errors	SLFN12L	HGNC	ENSG00000205045	93	0	0.00	47	12	20.34	-	-	-
STK33	0	genome.wustl.edu	37	11	8435219	8435219	+	Silent	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	11	8435219	8435219	C	T	SNP	STK33	ENST00000315204	human	ensembl	69_37n	-1	known	silent	c.1167	p.V389	0.220	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	STK33	HGNC	ENSG00000130413	304	0	0.00	310	83	21.12	-	-	-
SWAP70	0	genome.wustl.edu	37	11	9735179	9735179	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	11	9735179	9735179	C	T	SNP	SWAP70	ENST00000318950	human	ensembl	69_37n	+1	known	missense	c.407	p.S136L	0.934	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_EF_HAND_2,pfscan_Pleckstrin_homology	-	no_errors	SWAP70	HGNC	ENSG00000133789	120	0	0.00	126	39	23.49	-	-	-
TH1L	0	genome.wustl.edu	37	20	57564035	57564035	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	20	57564035	57564035	G	A	SNP	TH1L	ENST00000344018	human	ensembl	69_37n	+1	known	missense	c.490	p.E164K	1.000	pfam_TH1	pfam_TH1	-	no_errors	TH1L	HGNC	ENSG00000101158	185	0	0.00	88	33	27.27	-	-	-
USP12	0	genome.wustl.edu	37	13	27664021	27664021	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	13	27664021	27664021	G	A	SNP	USP12	ENST00000282344	human	ensembl	69_37n	-1	known	missense	c.733	p.R245W	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP12	HGNC	ENSG00000152484	183	0	0.00	188	53	21.99	-	-	-
VPS13B	0	genome.wustl.edu	37	8	100729551	100729551	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	8	100729551	100729551	G	C	SNP	VPS13B	ENST00000358544	human	ensembl	69_37n	+1	known	missense	c.6682	p.E2228Q	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549	122	0	0.00	125	32	20.38	-	-	-
VPS41	0	genome.wustl.edu	37	7	38796567	38796567	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	7	38796567	38796567	C	G	SNP	VPS41	ENST00000310301	human	ensembl	69_37n	-1	known	missense	c.1566	p.K522N	1.000	pirsf_VPS41	pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_VPS41,pfscan_Znf_RING	-	no_errors	VPS41	HGNC	ENSG00000006715	245	0	0.00	232	133	36.34	-	-	-
ZNF610	0	genome.wustl.edu	37	19	52856956	52856956	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RV-01A-11D-A099-09	TCGA-B6-A0RV-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	39b0b605-29ae-4e2c-81dc-319446c807dd	00bd0921-b765-4fbd-ab79-4d85aba0d1f6	19	52856956	52856956	G	A	SNP	ZNF610	ENST00000327920	human	ensembl	69_37n	+1	known	missense	c.85	p.V29M	0.972	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF610	HGNC	ENSG00000167554	237	0	0.00	145	52	26.40	-	-	-
