Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA9	0	genome.wustl.edu	37	17	66982401	66982401	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	17	66982401	66982401	T	C	SNP	ABCA9	ENST00000340001	human	ensembl	69_37n	-1	known	missense	c.4112	p.N1371S	0.985	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258	205	0	0.00	247	137	35.68	-	-	-
ABCA9	0	genome.wustl.edu	37	17	66982401	66982401	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	17	66982401	66982401	T	C	SNP	ABCA9	ENST00000340001	human	ensembl	69_37n	-1	known	missense	c.4112	p.N1371S	0.985	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258	399	0	0.00	247	137	35.68	-	-	-
ACSM3	0	genome.wustl.edu	37	16	20788842	20788842	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	16	20788842	20788842	C	T	SNP	ACSM3	ENST00000289416	human	ensembl	69_37n	+1	known	missense	c.578	p.S193F	0.750	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM3	HGNC	ENSG00000005187	53	0	0.00	91	18	16.51	-	-	-
ACSM3	0	genome.wustl.edu	37	16	20788842	20788842	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	16	20788842	20788842	C	T	SNP	ACSM3	ENST00000289416	human	ensembl	69_37n	+1	known	missense	c.578	p.S193F	0.750	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM3	HGNC	ENSG00000005187	129	0	0.00	91	18	16.51	-	-	-
AKAP3	0	genome.wustl.edu	37	12	4747364	4747364	+	Splice_Site	SNP	T	T	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	12	4747364	4747364	T	G	SNP	AKAP3	ENST00000228850	human	ensembl	69_37n	-1	known	splice_site	c.1-2	e1-2	0.985	-	-	-	no_errors	AKAP3	HGNC	ENSG00000111254	189	0	0.00	252	69	21.50	-	-	-
AKAP3	0	genome.wustl.edu	37	12	4747364	4747364	+	Splice_Site	SNP	T	T	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	12	4747364	4747364	T	G	SNP	AKAP3	ENST00000228850	human	ensembl	69_37n	-1	known	splice_site	c.1-2	e1-2	0.985	-	-	-	no_errors	AKAP3	HGNC	ENSG00000111254	413	1	0.24	252	69	21.50	-	-	-
ALG5	0	genome.wustl.edu	37	13	37569662	37569662	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	13	37569662	37569662	G	T	SNP	ALG5	ENST00000239891	human	ensembl	69_37n	-1	known	missense	c.138	p.F46L	0.974	NULL	pfam_Glyco_trans_2	-	no_errors	ALG5	HGNC	ENSG00000120697	102	0	0.00	55	20	26.67	-	-	-
ALG5	0	genome.wustl.edu	37	13	37569662	37569662	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	13	37569662	37569662	G	T	SNP	ALG5	ENST00000239891	human	ensembl	69_37n	-1	known	missense	c.138	p.F46L	0.974	NULL	pfam_Glyco_trans_2	-	no_errors	ALG5	HGNC	ENSG00000120697	66	0	0.00	55	20	26.67	-	-	-
AMZ2	0	genome.wustl.edu	37	17	66246405	66246405	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	17	66246405	66246405	A	G	SNP	AMZ2	ENST00000359904	human	ensembl	69_37n	+1	known	missense	c.77	p.Y26C	0.993	NULL	pfam_Pept_M54_archaemetzincn	-	no_errors	AMZ2	HGNC	ENSG00000196704	257	0	0.00	179	24	11.82	-	-	-
AMZ2	0	genome.wustl.edu	37	17	66246405	66246405	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	17	66246405	66246405	A	G	SNP	AMZ2	ENST00000359904	human	ensembl	69_37n	+1	known	missense	c.77	p.Y26C	0.993	NULL	pfam_Pept_M54_archaemetzincn	-	no_errors	AMZ2	HGNC	ENSG00000196704	175	0	0.00	179	24	11.82	-	-	-
ANKRD20A4	0	genome.wustl.edu	37	9	69385951	69385951	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	9	69385951	69385951	G	A	SNP	ANKRD20A4	ENST00000357336	human	ensembl	69_37n	+1	known	missense	c.388	p.D130N	0.161	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD20A4	HGNC	ENSG00000172014	40	0	0.00	51	20	28.17	-	-	-
ANKRD20A4	0	genome.wustl.edu	37	9	69385951	69385951	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	9	69385951	69385951	G	A	SNP	ANKRD20A4	ENST00000357336	human	ensembl	69_37n	+1	known	missense	c.388	p.D130N	0.161	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD20A4	HGNC	ENSG00000172014	127	0	0.00	51	20	28.17	-	-	-
ARHGAP35	0	genome.wustl.edu	37	19	47503649	47503649	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	19	47503649	47503649	C	A	SNP	ARHGAP35	ENST00000404338	human	ensembl	69_37n	+1	known	missense	c.4204	p.P1402T	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007	463	0	0.00	60	20	25.00	-	-	-
ARL17B	0	genome.wustl.edu	37	17	44430254	44430254	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	17	44430254	44430254	G	C	SNP	ARL17B	ENST00000450673	human	ensembl	69_37n	-1	known	missense	c.191	p.A64G	1.000	pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR	pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR	-	no_errors	ARL17B	HGNC	ENSG00000228696	9	0	0.00	51	25	32.89	-	-	-
ATOH1	0	genome.wustl.edu	37	4	94750648	94750648	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	4	94750648	94750648	A	C	SNP	ATOH1	ENST00000306011	human	ensembl	69_37n	+1	known	missense	c.571	p.N191H	1.000	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	ATOH1	HGNC	ENSG00000172238	50	0	0.00	45	9	16.67	-	-	-
ATOH1	0	genome.wustl.edu	37	4	94750648	94750648	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	4	94750648	94750648	A	C	SNP	ATOH1	ENST00000306011	human	ensembl	69_37n	+1	known	missense	c.571	p.N191H	1.000	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	ATOH1	HGNC	ENSG00000172238	81	0	0.00	45	9	16.67	-	-	-
BCL9L	0	genome.wustl.edu	37	11	118770742	118770742	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	11	118770742	118770742	G	C	SNP	BCL9L	ENST00000334801	human	ensembl	69_37n	-1	known	missense	c.3290	p.P1097R	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	26	0	0.00	19	5	20.83	-	-	-
BCL9L	0	genome.wustl.edu	37	11	118770742	118770742	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	11	118770742	118770742	G	C	SNP	BCL9L	ENST00000334801	human	ensembl	69_37n	-1	known	missense	c.3290	p.P1097R	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	96	0	0.00	19	5	20.83	-	-	-
C5orf54	0	genome.wustl.edu	37	5	159822112	159822112	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	5	159822112	159822112	C	T	SNP	C5orf54	ENST00000408953	human	ensembl	69_37n	-1	known	missense	c.386	p.G129E	1.000	NULL	superfamily_RNaseH-like_dom	-	no_errors	C5orf54	HGNC	ENSG00000221886	111	0	0.00	134	35	20.71	-	-	-
C5orf54	0	genome.wustl.edu	37	5	159822112	159822112	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	5	159822112	159822112	C	T	SNP	C5orf54	ENST00000408953	human	ensembl	69_37n	-1	known	missense	c.386	p.G129E	1.000	NULL	superfamily_RNaseH-like_dom	-	no_errors	C5orf54	HGNC	ENSG00000221886	131	0	0.00	134	35	20.71	-	-	-
C6orf170	0	genome.wustl.edu	37	6	121481215	121481215	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	6	121481215	121481215	G	A	SNP	C6orf170	ENST00000275159	human	ensembl	69_37n	-1	putative	missense	c.2837	p.S946L	1.000	NULL	superfamily_Rab-GTPase-TBC_dom	-	no_errors	C6orf170	HGNC	ENSG00000146350	99	0	0.00	148	25	14.37	-	-	-
C6orf170	0	genome.wustl.edu	37	6	121481215	121481215	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	6	121481215	121481215	G	A	SNP	C6orf170	ENST00000275159	human	ensembl	69_37n	-1	putative	missense	c.2837	p.S946L	1.000	NULL	superfamily_Rab-GTPase-TBC_dom	-	no_errors	C6orf170	HGNC	ENSG00000146350	117	0	0.00	148	25	14.37	-	-	-
CAMK2D	0	genome.wustl.edu	37	4	114438800	114438800	+	Nonsense_Mutation	SNP	A	A	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	4	114438800	114438800	A	T	SNP	CAMK2D	ENST00000454265	human	ensembl	69_37n	-1	known	nonsense	c.615	p.Y205*	0.992	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CAMK2D	HGNC	ENSG00000145349	131	0	0.00	196	42	17.65	-	-	-
CAMK2D	0	genome.wustl.edu	37	4	114438800	114438800	+	Nonsense_Mutation	SNP	A	A	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	4	114438800	114438800	A	T	SNP	CAMK2D	ENST00000454265	human	ensembl	69_37n	-1	known	nonsense	c.615	p.Y205*	0.992	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CAMK2D	HGNC	ENSG00000145349	169	0	0.00	196	42	17.65	-	-	-
CCDC110	0	genome.wustl.edu	37	4	186379415	186379415	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	4	186379415	186379415	C	T	SNP	CCDC110	ENST00000307588	human	ensembl	69_37n	-1	known	missense	c.2326	p.D776N	0.801	superfamily_4_helix_cytokine-like_core	superfamily_4_helix_cytokine-like_core	-	no_errors	CCDC110	HGNC	ENSG00000168491	125	0	0.00	60	18	23.08	-	-	-
CCDC110	0	genome.wustl.edu	37	4	186379415	186379415	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	4	186379415	186379415	C	T	SNP	CCDC110	ENST00000307588	human	ensembl	69_37n	-1	known	missense	c.2326	p.D776N	0.801	superfamily_4_helix_cytokine-like_core	superfamily_4_helix_cytokine-like_core	-	no_errors	CCDC110	HGNC	ENSG00000168491	56	0	0.00	60	18	23.08	-	-	-
CCDC27	0	genome.wustl.edu	37	1	3672038	3672038	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	3672038	3672038	G	A	SNP	CCDC27	ENST00000294600	human	ensembl	69_37n	+1	known	missense	c.460	p.D154N	0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC27	HGNC	ENSG00000162592	101	0	0.00	121	41	25.15	-	-	-
CCDC27	0	genome.wustl.edu	37	1	3672038	3672038	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	3672038	3672038	G	A	SNP	CCDC27	ENST00000294600	human	ensembl	69_37n	+1	known	missense	c.460	p.D154N	0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC27	HGNC	ENSG00000162592	226	0	0.00	121	41	25.15	-	-	-
CKAP2	0	genome.wustl.edu	37	13	53035596	53035596	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	13	53035596	53035596	C	A	SNP	CKAP2	ENST00000378037	human	ensembl	69_37n	+1	known	missense	c.638	p.P213H	0.024	NULL	NULL	-	no_errors	CKAP2	HGNC	ENSG00000136108	167	0	0.00	73	11	13.10	-	-	-
CKAP2	0	genome.wustl.edu	37	13	53035596	53035596	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	13	53035596	53035596	C	A	SNP	CKAP2	ENST00000378037	human	ensembl	69_37n	+1	known	missense	c.638	p.P213H	0.024	NULL	NULL	-	no_errors	CKAP2	HGNC	ENSG00000136108	77	0	0.00	73	11	13.10	-	-	-
COL4A1	0	genome.wustl.edu	37	13	110847369	110847369	+	Splice_Site	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	13	110847369	110847369	C	A	SNP	COL4A1	ENST00000375820	human	ensembl	69_37n	-1	known	splice_site	c.1381+1	e22+1	1.000	-	-	-	no_errors	COL4A1	HGNC	ENSG00000187498	61	0	0.00	48	10	16.95	-	-	-
COL4A1	0	genome.wustl.edu	37	13	110847369	110847369	+	Splice_Site	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	13	110847369	110847369	C	A	SNP	COL4A1	ENST00000375820	human	ensembl	69_37n	-1	known	splice_site	c.1381+1	e22+1	1.000	-	-	-	no_errors	COL4A1	HGNC	ENSG00000187498	34	0	0.00	48	10	16.95	-	-	-
CREB3L2	0	genome.wustl.edu	37	7	137600703	137600703	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	7	137600703	137600703	G	C	SNP	CREB3L2	ENST00000330387	human	ensembl	69_37n	-1	known	missense	c.375	p.I125M	1.000	NULL	pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	CREB3L2	HGNC	ENSG00000182158	63	0	0.00	65	8	10.96	-	-	-
CREB3L2	0	genome.wustl.edu	37	7	137600703	137600703	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	7	137600703	137600703	G	C	SNP	CREB3L2	ENST00000330387	human	ensembl	69_37n	-1	known	missense	c.375	p.I125M	1.000	NULL	pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	CREB3L2	HGNC	ENSG00000182158	113	0	0.00	65	8	10.96	-	-	-
ERO1L	0	genome.wustl.edu	37	14	53119001	53119001	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	14	53119001	53119001	T	C	SNP	ERO1L	ENST00000395686	human	ensembl	69_37n	-1	known	missense	c.1081	p.N361D	1.000	pfam_ER_oxidoreductin-1,superfamily_ER_oxidoreductin-1,pirsf_ER_oxidoreductin-1	pfam_ER_oxidoreductin-1,superfamily_ER_oxidoreductin-1,pirsf_ER_oxidoreductin-1	-	no_errors	ERO1L	HGNC	ENSG00000197930	72	0	0.00	102	13	11.30	-	-	-
ERO1L	0	genome.wustl.edu	37	14	53119001	53119001	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	14	53119001	53119001	T	C	SNP	ERO1L	ENST00000395686	human	ensembl	69_37n	-1	known	missense	c.1081	p.N361D	1.000	pfam_ER_oxidoreductin-1,superfamily_ER_oxidoreductin-1,pirsf_ER_oxidoreductin-1	pfam_ER_oxidoreductin-1,superfamily_ER_oxidoreductin-1,pirsf_ER_oxidoreductin-1	-	no_errors	ERO1L	HGNC	ENSG00000197930	79	0	0.00	102	13	11.30	-	-	-
EYA4	0	genome.wustl.edu	37	6	133777745	133777745	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	6	133777745	133777745	C	T	SNP	EYA4	ENST00000355167	human	ensembl	69_37n	+1	known	missense	c.329	p.A110V	1.000	NULL	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA4	HGNC	ENSG00000112319	223	0	0.00	276	49	15.08	-	-	-
EYA4	0	genome.wustl.edu	37	6	133777745	133777745	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	6	133777745	133777745	C	T	SNP	EYA4	ENST00000355167	human	ensembl	69_37n	+1	known	missense	c.329	p.A110V	1.000	NULL	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA4	HGNC	ENSG00000112319	411	0	0.00	276	49	15.08	-	-	-
FBXO40	0	genome.wustl.edu	37	3	121340395	121340395	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	3	121340395	121340395	T	G	SNP	FBXO40	ENST00000338040	human	ensembl	69_37n	+1	known	missense	c.119	p.L40R	0.780	superfamily_TRAF-like	superfamily_F-box_dom_cyclin-like,superfamily_TRAF-like,pfscan_F-box_dom_cyclin-like,pfscan_Znf_TRAF	-	no_errors	FBXO40	HGNC	ENSG00000163833	183	0	0.00	80	15	15.62	-	-	-
FBXO40	0	genome.wustl.edu	37	3	121340395	121340395	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	3	121340395	121340395	T	G	SNP	FBXO40	ENST00000338040	human	ensembl	69_37n	+1	known	missense	c.119	p.L40R	0.780	superfamily_TRAF-like	superfamily_F-box_dom_cyclin-like,superfamily_TRAF-like,pfscan_F-box_dom_cyclin-like,pfscan_Znf_TRAF	-	no_errors	FBXO40	HGNC	ENSG00000163833	179	0	0.00	80	15	15.62	-	-	-
FBXO5	0	genome.wustl.edu	37	6	153293436	153293436	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	6	153293436	153293436	T	G	SNP	FBXO5	ENST00000229758	human	ensembl	69_37n	-1	known	missense	c.1063	p.T355P	0.058	NULL	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like	-	no_errors	FBXO5	HGNC	ENSG00000112029	83	0	0.00	119	15	11.03	-	-	-
FBXO5	0	genome.wustl.edu	37	6	153293436	153293436	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	6	153293436	153293436	T	G	SNP	FBXO5	ENST00000229758	human	ensembl	69_37n	-1	known	missense	c.1063	p.T355P	0.058	NULL	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like	-	no_errors	FBXO5	HGNC	ENSG00000112029	68	0	0.00	119	15	11.03	-	-	-
FCGBP	0	genome.wustl.edu	37	19	40377034	40377034	+	Silent	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	19	40377034	40377034	G	A	SNP	FCGBP	ENST00000221347	human	ensembl	69_37n	-1	known	silent	c.11388	p.N3796	0.470	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	19	0	0.00	12	9	40.91	-	-	-
FERD3L	0	genome.wustl.edu	37	7	19184943	19184943	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	7	19184943	19184943	C	G	SNP	FERD3L	ENST00000275461	human	ensembl	69_37n	-1	known	missense	c.43	p.D15H	1.000	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	FERD3L	HGNC	ENSG00000146618	17	0	0.00	32	16	33.33	-	-	-
FERD3L	0	genome.wustl.edu	37	7	19184943	19184943	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	7	19184943	19184943	C	G	SNP	FERD3L	ENST00000275461	human	ensembl	69_37n	-1	known	missense	c.43	p.D15H	1.000	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	FERD3L	HGNC	ENSG00000146618	60	0	0.00	32	16	33.33	-	-	-
FRG1B	0	genome.wustl.edu	37	20	29614296	29614297	+	RNA	INS	-	-	AGA			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	20	29614296	29614297	-	AGA	INS	FRG1B	ENST00000482423	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.998:0.997	-	-	-	no_errors	FRG1B	HGNC	ENSG00000149531	65	0	0.00	109	18	14.17	-	-	-
FRMD4A	0	genome.wustl.edu	37	10	13804668	13804668	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	10	13804668	13804668	C	A	SNP	FRMD4A	ENST00000357447	human	ensembl	69_37n	-1	known	missense	c.397	p.V133F	0.985	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	pfam_DUF3338,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4A	HGNC	ENSG00000151474	178	1	0.56	55	10	15.38	-	-	-
FRMD4A	0	genome.wustl.edu	37	10	13804668	13804668	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	10	13804668	13804668	C	A	SNP	FRMD4A	ENST00000357447	human	ensembl	69_37n	-1	known	missense	c.397	p.V133F	0.985	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	pfam_DUF3338,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4A	HGNC	ENSG00000151474	77	0	0.00	55	10	15.38	-	-	-
FSCB	0	genome.wustl.edu	37	14	44974189	44974189	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	14	44974189	44974189	C	A	SNP	FSCB	ENST00000340446	human	ensembl	69_37n	-1	known	missense	c.2002	p.A668S	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139	14	0	0.00	31	8	20.51	-	-	-
GLUD2	0	genome.wustl.edu	37	X	120182736	120182736	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	X	120182736	120182736	A	G	SNP	GLUD2	ENST00000328078	human	ensembl	69_37n	+1	known	missense	c.1198	p.I400V	1.000	pfam_Glu/Leu/Phe/Val_DH_C,smart_Glu/Leu/Phe/Val_DH_C	pfam_Glu/Leu/Phe/Val_DH_C,pfam_Glu/Leu/Phe/Val_DH_dimer_dom,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	-	no_errors	GLUD2	HGNC	ENSG00000182890	261	0	0.00	110	52	32.10	-	-	-
GLUD2	0	genome.wustl.edu	37	X	120182736	120182736	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	X	120182736	120182736	A	G	SNP	GLUD2	ENST00000328078	human	ensembl	69_37n	+1	known	missense	c.1198	p.I400V	1.000	pfam_Glu/Leu/Phe/Val_DH_C,smart_Glu/Leu/Phe/Val_DH_C	pfam_Glu/Leu/Phe/Val_DH_C,pfam_Glu/Leu/Phe/Val_DH_dimer_dom,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	-	no_errors	GLUD2	HGNC	ENSG00000182890	334	0	0.00	110	52	32.10	-	-	-
GOLGA8DP	0	genome.wustl.edu	37	15	22709040	22709040	+	RNA	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	15	22709040	22709040	T	C	SNP	GOLGA8DP	ENST00000314246	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	GOLGA8DP	HGNC	ENSG00000185182	12	0	0.00	21	13	38.24	-	-	-
GPAM	0	genome.wustl.edu	37	10	113915699	113915699	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	10	113915699	113915699	G	T	SNP	GPAM	ENST00000348367	human	ensembl	69_37n	-1	known	missense	c.2234	p.P745H	0.989	NULL	pfam_Acyltransferase,smart_Acyltransferase	-	no_errors	GPAM	HGNC	ENSG00000119927	134	0	0.00	137	40	22.60	-	-	-
GPAM	0	genome.wustl.edu	37	10	113915699	113915699	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	10	113915699	113915699	G	T	SNP	GPAM	ENST00000348367	human	ensembl	69_37n	-1	known	missense	c.2234	p.P745H	0.989	NULL	pfam_Acyltransferase,smart_Acyltransferase	-	no_errors	GPAM	HGNC	ENSG00000119927	214	0	0.00	137	40	22.60	-	-	-
GRIK3	0	genome.wustl.edu	37	1	37307422	37307422	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	37307422	37307422	T	A	SNP	GRIK3	ENST00000373091	human	ensembl	69_37n	-1	known	missense	c.1445	p.E482V	1.000	pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	104	0	0.00	105	12	10.17	-	-	-
GRIK3	0	genome.wustl.edu	37	1	37307422	37307422	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	37307422	37307422	T	A	SNP	GRIK3	ENST00000373091	human	ensembl	69_37n	-1	known	missense	c.1445	p.E482V	1.000	pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	220	0	0.00	105	12	10.17	-	-	-
HHAT	0	genome.wustl.edu	37	1	210573999	210573999	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	210573999	210573999	A	C	SNP	HHAT	ENST00000391905	human	ensembl	69_37n	+1	known	missense	c.461	p.E154A	0.994	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	HHAT	HGNC	ENSG00000054392	55	0	0.00	72	21	22.58	-	-	-
HHAT	0	genome.wustl.edu	37	1	210573999	210573999	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	210573999	210573999	A	C	SNP	HHAT	ENST00000391905	human	ensembl	69_37n	+1	known	missense	c.461	p.E154A	0.994	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	HHAT	HGNC	ENSG00000054392	127	0	0.00	72	21	22.58	-	-	-
ITGA11	0	genome.wustl.edu	37	15	68643690	68643690	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	15	68643690	68643690	A	G	SNP	ITGA11	ENST00000315757	human	ensembl	69_37n	-1	known	missense	c.800	p.I267T	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809	49	0	0.00	55	12	17.65	-	-	-
ITGA11	0	genome.wustl.edu	37	15	68643690	68643690	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	15	68643690	68643690	A	G	SNP	ITGA11	ENST00000315757	human	ensembl	69_37n	-1	known	missense	c.800	p.I267T	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809	110	0	0.00	55	12	17.65	-	-	-
KCNA1	0	genome.wustl.edu	37	12	5021590	5021590	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	12	5021590	5021590	C	T	SNP	KCNA1	ENST00000382545	human	ensembl	69_37n	+1	known	missense	c.1046	p.A349V	1.000	pfam_Ion_trans_dom,pfam_Ion_trans_2	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv1.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1.3	-	no_errors	KCNA1	HGNC	ENSG00000111262	286	0	0.00	162	40	19.80	-	-	-
KCNA1	0	genome.wustl.edu	37	12	5021590	5021590	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	12	5021590	5021590	C	T	SNP	KCNA1	ENST00000382545	human	ensembl	69_37n	+1	known	missense	c.1046	p.A349V	1.000	pfam_Ion_trans_dom,pfam_Ion_trans_2	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv1.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1.3	-	no_errors	KCNA1	HGNC	ENSG00000111262	291	0	0.00	162	40	19.80	-	-	-
KIAA1211	0	genome.wustl.edu	37	4	57180592	57180592	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	4	57180592	57180592	T	-	DEL	KIAA1211	ENST00000504228	human	ensembl	69_37n	+1	known	frame_shift_del	c.924	p.E309fs	0.000	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265	8	0	0.00	0	3	100.00	-	-	-
LAMC2	0	genome.wustl.edu	37	1	183177174	183177174	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	183177174	183177174	C	T	SNP	LAMC2	ENST00000264144	human	ensembl	69_37n	+1	known	missense	c.238	p.R80C	0.991	superfamily_Growth_fac_rcpt,smart_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin	-	no_errors	LAMC2	HGNC	ENSG00000058085	562	1	0.18	665	138	17.16	-	-	-
LAMC2	0	genome.wustl.edu	37	1	183177174	183177174	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	183177174	183177174	C	T	SNP	LAMC2	ENST00000264144	human	ensembl	69_37n	+1	known	missense	c.238	p.R80C	0.991	superfamily_Growth_fac_rcpt,smart_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin	-	no_errors	LAMC2	HGNC	ENSG00000058085	1269	0	0.00	665	138	17.16	-	-	-
LIMS1	0	genome.wustl.edu	37	2	109293130	109293130	+	Silent	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	2	109293130	109293130	A	G	SNP	LIMS1	ENST00000542845	human	ensembl	69_37n	+1	known	silent	c.900	p.A300	0.000	pfam_Znf_LIM,smart_Znf_LIM,pirsf_PINCH,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pirsf_PINCH,pfscan_Znf_LIM	-	no_errors	LIMS1	HGNC	ENSG00000169756	37	0	0.00	34	10	22.73	-	-	-
MBTPS1	0	genome.wustl.edu	37	16	84088111	84088111	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	16	84088111	84088111	C	A	SNP	MBTPS1	ENST00000343411	human	ensembl	69_37n	-1	known	missense	c.3102	p.R1034S	0.994	NULL	pfam_Peptidase_S8/S53,superfamily_Peptidase_S8/S53,prints_Peptidase_S8_subtilisin-rel	-	no_errors	MBTPS1	HGNC	ENSG00000140943	33	0	0.00	14	6	30.00	-	-	-
MMP8	0	genome.wustl.edu	37	11	102589268	102589268	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	11	102589268	102589268	G	T	SNP	MMP8	ENST00000236826	human	ensembl	69_37n	-1	known	missense	c.661	p.H221N	1.000	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,pirsf_Pept_M10A_matrix_strom,prints_Pept_M10A_matrixin	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin/matrixin_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,pirsf_Pept_M10A_matrix_strom,prints_Pept_M10A_matrixin	-	no_errors	MMP8	HGNC	ENSG00000118113	103	0	0.00	69	16	18.82	-	-	-
MMP8	0	genome.wustl.edu	37	11	102589268	102589268	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	11	102589268	102589268	G	T	SNP	MMP8	ENST00000236826	human	ensembl	69_37n	-1	known	missense	c.661	p.H221N	1.000	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,pirsf_Pept_M10A_matrix_strom,prints_Pept_M10A_matrixin	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin/matrixin_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,pirsf_Pept_M10A_matrix_strom,prints_Pept_M10A_matrixin	-	no_errors	MMP8	HGNC	ENSG00000118113	156	0	0.00	69	16	18.82	-	-	-
MST1P9	0	genome.wustl.edu	37	1	17085452	17085452	+	Silent	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	17085452	17085452	A	G	SNP	MST1P9	ENST00000334998	human	ensembl	69_37n	-1	known	silent	c.1239	p.F413	0.995	superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	MST1P9	HGNC	ENSG00000186715	37	0	0.00	78	10	11.36	-	-	-
MUC16	0	genome.wustl.edu	37	19	9019327	9019327	+	Silent	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	19	9019327	9019327	G	C	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	silent	c.37560	p.S12520	0.091	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	232	0	0.00	217	26	10.70	-	-	-
MUC16	0	genome.wustl.edu	37	19	9019327	9019327	+	Silent	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	19	9019327	9019327	G	C	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	silent	c.37560	p.S12520	0.091	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	262	0	0.00	217	26	10.70	-	-	-
NSL1	0	genome.wustl.edu	37	1	212911865	212911865	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	212911865	212911865	G	C	SNP	NSL1	ENST00000366977	human	ensembl	69_37n	-1	known	missense	c.731	p.T244R	0.976	NULL	pfam_Kinetochore_Mis14	-	no_errors	NSL1	HGNC	ENSG00000117697	165	0	0.00	200	49	19.68	-	-	-
NSL1	0	genome.wustl.edu	37	1	212911865	212911865	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	212911865	212911865	G	C	SNP	NSL1	ENST00000366977	human	ensembl	69_37n	-1	known	missense	c.731	p.T244R	0.976	NULL	pfam_Kinetochore_Mis14	-	no_errors	NSL1	HGNC	ENSG00000117697	131	0	0.00	200	49	19.68	-	-	-
NUAK1	0	genome.wustl.edu	37	12	106461617	106461617	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	12	106461617	106461617	A	T	SNP	NUAK1	ENST00000261402	human	ensembl	69_37n	-1	known	missense	c.949	p.C317S	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	NUAK1	HGNC	ENSG00000074590	41	0	0.00	51	29	36.25	-	-	-
NUAK1	0	genome.wustl.edu	37	12	106461617	106461617	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	12	106461617	106461617	A	T	SNP	NUAK1	ENST00000261402	human	ensembl	69_37n	-1	known	missense	c.949	p.C317S	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	NUAK1	HGNC	ENSG00000074590	80	0	0.00	51	29	36.25	-	-	-
ODZ4	0	genome.wustl.edu	37	11	78423693	78423693	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	11	78423693	78423693	G	T	SNP	ODZ4	ENST00000278550	human	ensembl	69_37n	-1	known	missense	c.3888	p.D1296E	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ4	HGNC	ENSG00000149256	155	0	0.00	111	39	26.00	-	-	-
OR10C1	0	genome.wustl.edu	37	6	29407949	29407949	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	6	29407949	29407949	G	A	SNP	OR10C1	ENST00000444197	human	ensembl	69_37n	+1	known	missense	c.157	p.A53T	0.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10C1	HGNC	ENSG00000206474	395	1	0.25	364	51	12.23	-	-	-
OR10C1	0	genome.wustl.edu	37	6	29407949	29407949	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	6	29407949	29407949	G	A	SNP	OR10C1	ENST00000444197	human	ensembl	69_37n	+1	known	missense	c.157	p.A53T	0.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10C1	HGNC	ENSG00000206474	727	0	0.00	364	51	12.23	-	-	-
OR1L8	0	genome.wustl.edu	37	9	125329851	125329851	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	9	125329851	125329851	C	A	SNP	OR1L8	ENST00000304865	human	ensembl	69_37n	-1	known	missense	c.906	p.R302S	0.147	pfam_7TM_GPCR_olfarory/Srsx	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR1L8	HGNC	ENSG00000171496	135	0	0.00	161	64	28.44	-	-	-
OR1L8	0	genome.wustl.edu	37	9	125329851	125329851	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	9	125329851	125329851	C	A	SNP	OR1L8	ENST00000304865	human	ensembl	69_37n	-1	known	missense	c.906	p.R302S	0.147	pfam_7TM_GPCR_olfarory/Srsx	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR1L8	HGNC	ENSG00000171496	200	0	0.00	161	64	28.44	-	-	-
OR4N2	0	genome.wustl.edu	37	14	20296167	20296167	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	14	20296167	20296167	T	A	SNP	OR4N2	ENST00000315947	human	ensembl	69_37n	+1	known	missense	c.560	p.L187Q	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4N2	HGNC	ENSG00000176294	441	0	0.00	689	95	12.09	-	-	-
OR4N2	0	genome.wustl.edu	37	14	20296167	20296167	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	14	20296167	20296167	T	A	SNP	OR4N2	ENST00000315947	human	ensembl	69_37n	+1	known	missense	c.560	p.L187Q	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4N2	HGNC	ENSG00000176294	736	0	0.00	689	95	12.09	-	-	-
OR8U1	0	genome.wustl.edu	37	11	56143625	56143625	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	11	56143625	56143625	C	A	SNP	OR8U1	ENST00000302270	human	ensembl	69_37n	+1	known	missense	c.526	p.H176N	0.074	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR8U1	HGNC	ENSG00000172199	777	0	0.00	684	78	10.20	-	-	-
OR8U1	0	genome.wustl.edu	37	11	56143625	56143625	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	11	56143625	56143625	C	A	SNP	OR8U1	ENST00000302270	human	ensembl	69_37n	+1	known	missense	c.526	p.H176N	0.074	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR8U1	HGNC	ENSG00000172199	1109	0	0.00	684	78	10.20	-	-	-
PLOD3	0	genome.wustl.edu	37	7	100856125	100856126	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	7	100856125	100856126	-	C	INS	PLOD3	ENST00000223127	human	ensembl	69_37n	-1	known	frame_shift_ins	c.877_876	p.Q292fs	1.000:1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397	14	0	0.00	9	3	25.00	-	-	-
POTEF	0	genome.wustl.edu	37	2	130832165	130832165	+	Silent	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	2	130832165	130832165	C	T	SNP	POTEF	ENST00000357462	human	ensembl	69_37n	-1	known	silent	c.2880	p.A960	1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-like,prints_Actin-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	POTEF	HGNC	ENSG00000196604	28	0	0.00	32	12	27.27	-	-	-
POU2F1	0	genome.wustl.edu	37	1	167382293	167382293	+	Silent	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	167382293	167382293	C	A	SNP	POU2F1	ENST00000367866	human	ensembl	69_37n	+1	known	silent	c.1932	p.T644	0.990	NULL	pfam_POU_specific,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeodomain,pfscan_Homeodomain,pfscan_POU_specific,prints_POU,prints_TF_octamer	-	no_errors	POU2F1	HGNC	ENSG00000143190	130	0	0.00	157	36	18.65	-	-	-
POU2F1	0	genome.wustl.edu	37	1	167382293	167382293	+	Silent	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	167382293	167382293	C	A	SNP	POU2F1	ENST00000367866	human	ensembl	69_37n	+1	known	silent	c.1932	p.T644	0.990	NULL	pfam_POU_specific,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeodomain,pfscan_Homeodomain,pfscan_POU_specific,prints_POU,prints_TF_octamer	-	no_errors	POU2F1	HGNC	ENSG00000143190	164	0	0.00	157	36	18.65	-	-	-
PRAMEF7	0	genome.wustl.edu	37	1	12980232	12980232	+	Silent	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	12980232	12980232	G	A	SNP	PRAMEF7	ENST00000330881	human	ensembl	69_37n	+1	known	silent	c.1424	p.*475	0.000	NULL	NULL	-	no_errors	PRAMEF7	HGNC	ENSG00000204510	38	0	0.00	12	4	25.00	-	-	-
PTCHD1	0	genome.wustl.edu	37	X	23411647	23411647	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	X	23411647	23411647	T	A	SNP	PTCHD1	ENST00000379361	human	ensembl	69_37n	+1	known	missense	c.2012	p.L671H	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD1	HGNC	ENSG00000165186	236	0	0.00	96	35	26.72	-	-	-
PTCHD1	0	genome.wustl.edu	37	X	23411647	23411647	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	X	23411647	23411647	T	A	SNP	PTCHD1	ENST00000379361	human	ensembl	69_37n	+1	known	missense	c.2012	p.L671H	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD1	HGNC	ENSG00000165186	103	0	0.00	96	35	26.72	-	-	-
PTCHD4	0	genome.wustl.edu	37	6	47976671	47976671	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	6	47976671	47976671	T	C	SNP	PTCHD4	ENST00000339488	human	ensembl	69_37n	-1	known	missense	c.606	p.I202M	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD4	HGNC	ENSG00000244694	112	0	0.00	83	12	12.63	-	-	-
PTCHD4	0	genome.wustl.edu	37	6	47976671	47976671	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	6	47976671	47976671	T	C	SNP	PTCHD4	ENST00000339488	human	ensembl	69_37n	-1	known	missense	c.606	p.I202M	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD4	HGNC	ENSG00000244694	85	0	0.00	83	12	12.63	-	-	-
RANBP17	0	genome.wustl.edu	37	5	170380678	170380678	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	5	170380678	170380678	G	A	SNP	RANBP17	ENST00000523189	human	ensembl	69_37n	+1	known	missense	c.1546	p.D516N	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764	82	0	0.00	159	42	20.90	-	-	-
RANBP17	0	genome.wustl.edu	37	5	170380678	170380678	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	5	170380678	170380678	G	A	SNP	RANBP17	ENST00000523189	human	ensembl	69_37n	+1	known	missense	c.1546	p.D516N	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764	240	0	0.00	159	42	20.90	-	-	-
RASAL1	0	genome.wustl.edu	37	12	113552621	113552621	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	12	113552621	113552621	C	G	SNP	RASAL1	ENST00000546530	human	ensembl	69_37n	-1	known	missense	c.1165	p.D389H	1.000	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_RasGAP,pfam_C2_Ca-dep,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASAL1	HGNC	ENSG00000111344	73	0	0.00	67	36	34.95	-	-	-
RASAL1	0	genome.wustl.edu	37	12	113552621	113552621	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	12	113552621	113552621	C	G	SNP	RASAL1	ENST00000546530	human	ensembl	69_37n	-1	known	missense	c.1165	p.D389H	1.000	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_RasGAP,pfam_C2_Ca-dep,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASAL1	HGNC	ENSG00000111344	173	0	0.00	67	36	34.95	-	-	-
REG1P	0	genome.wustl.edu	37	2	79363132	79363132	+	RNA	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	2	79363132	79363132	C	T	SNP	REG1P	ENST00000377435	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	REG1P	HGNC	ENSG00000204787	76	0	0.00	36	12	25.00	-	-	-
REG1P	0	genome.wustl.edu	37	2	79363132	79363132	+	RNA	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	2	79363132	79363132	C	T	SNP	REG1P	ENST00000377435	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	REG1P	HGNC	ENSG00000204787	54	0	0.00	36	12	25.00	-	-	-
RET	0	genome.wustl.edu	37	10	43597801	43597801	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	10	43597801	43597801	C	A	SNP	RET	ENST00000355710	human	ensembl	69_37n	+1	known	missense	c.349	p.P117T	0.993	pirsf_Tyr_kinase_Ret_rcpt	pirsf_Tyr_kinase_Ret_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Cadherin,superfamily_Kinase-like_dom,superfamily_Cadherin-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Cadherin	-	no_errors	RET	HGNC	ENSG00000165731	64	0	0.00	41	6	12.50	-	-	-
RET	0	genome.wustl.edu	37	10	43597801	43597801	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	10	43597801	43597801	C	A	SNP	RET	ENST00000355710	human	ensembl	69_37n	+1	known	missense	c.349	p.P117T	0.993	pirsf_Tyr_kinase_Ret_rcpt	pirsf_Tyr_kinase_Ret_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Cadherin,superfamily_Kinase-like_dom,superfamily_Cadherin-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Cadherin	-	no_errors	RET	HGNC	ENSG00000165731	118	0	0.00	41	6	12.50	-	-	-
RGS4	0	genome.wustl.edu	37	1	163044344	163044344	+	Nonsense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	163044344	163044344	T	A	SNP	RGS4	ENST00000421743	human	ensembl	69_37n	+1	known	nonsense	c.903	p.C301*	0.987	NULL	pfam_Regulat_G_prot_signal,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal,pfscan_Regulat_G_prot_signal,prints_Regulat_G_prot_signal	-	no_errors	RGS4	HGNC	ENSG00000117152	529	0	0.00	252	76	23.10	-	-	-
RGS4	0	genome.wustl.edu	37	1	163044344	163044344	+	Nonsense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	163044344	163044344	T	A	SNP	RGS4	ENST00000421743	human	ensembl	69_37n	+1	known	nonsense	c.903	p.C301*	0.987	NULL	pfam_Regulat_G_prot_signal,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal,pfscan_Regulat_G_prot_signal,prints_Regulat_G_prot_signal	-	no_errors	RGS4	HGNC	ENSG00000117152	328	0	0.00	252	76	23.10	-	-	-
SEMA5A	0	genome.wustl.edu	37	5	9197331	9197331	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	5	9197331	9197331	T	A	SNP	SEMA5A	ENST00000382496	human	ensembl	69_37n	-1	known	missense	c.1017	p.E339D	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Thrombospondin_1_rpt,superfamily_Semaphorin/CD100_Ag,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Thrombospondin_1_rpt,pfscan_Semaphorin/CD100_Ag,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902	30	0	0.00	54	20	27.03	-	-	-
SEMA5A	0	genome.wustl.edu	37	5	9197331	9197331	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	5	9197331	9197331	T	A	SNP	SEMA5A	ENST00000382496	human	ensembl	69_37n	-1	known	missense	c.1017	p.E339D	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Thrombospondin_1_rpt,superfamily_Semaphorin/CD100_Ag,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Thrombospondin_1_rpt,pfscan_Semaphorin/CD100_Ag,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902	88	0	0.00	54	20	27.03	-	-	-
SMYD4	0	genome.wustl.edu	37	17	1703856	1703856	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	17	1703856	1703856	G	C	SNP	SMYD4	ENST00000305513	human	ensembl	69_37n	-1	known	missense	c.832	p.H278D	0.000	pfam_SET_dom	pfam_SET_dom,pfam_Znf_MYND,pfscan_SET_dom,pfscan_Znf_MYND	-	no_errors	SMYD4	HGNC	ENSG00000186532	145	0	0.00	99	11	10.00	-	-	-
SMYD4	0	genome.wustl.edu	37	17	1703856	1703856	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	17	1703856	1703856	G	C	SNP	SMYD4	ENST00000305513	human	ensembl	69_37n	-1	known	missense	c.832	p.H278D	0.000	pfam_SET_dom	pfam_SET_dom,pfam_Znf_MYND,pfscan_SET_dom,pfscan_Znf_MYND	-	no_errors	SMYD4	HGNC	ENSG00000186532	103	0	0.00	99	11	10.00	-	-	-
SORBS3	0	genome.wustl.edu	37	8	22419432	22419432	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	8	22419432	22419432	C	A	SNP	SORBS3	ENST00000240123	human	ensembl	69_37n	+1	known	missense	c.572	p.T191K	0.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain	-	no_errors	SORBS3	HGNC	ENSG00000120896	11	0	0.00	5	4	44.44	-	-	-
SORBS3	0	genome.wustl.edu	37	8	22419432	22419432	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	8	22419432	22419432	C	A	SNP	SORBS3	ENST00000240123	human	ensembl	69_37n	+1	known	missense	c.572	p.T191K	0.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain	-	no_errors	SORBS3	HGNC	ENSG00000120896	24	0	0.00	5	4	44.44	-	-	-
SPPL3	0	genome.wustl.edu	37	12	121248611	121248611	+	Splice_Site	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	12	121248611	121248611	C	A	SNP	SPPL3	ENST00000353487	human	ensembl	69_37n	-1	known	splice_site	c.101+1	e2+1	1.000	-	-	-	no_errors	SPPL3	HGNC	ENSG00000157837	167	0	0.00	168	53	23.98	-	-	-
SPPL3	0	genome.wustl.edu	37	12	121248611	121248611	+	Splice_Site	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	12	121248611	121248611	C	A	SNP	SPPL3	ENST00000353487	human	ensembl	69_37n	-1	known	splice_site	c.101+1	e2+1	1.000	-	-	-	no_errors	SPPL3	HGNC	ENSG00000157837	224	0	0.00	168	53	23.98	-	-	-
SPPL3	0	genome.wustl.edu	37	12	121248612	121248612	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	12	121248612	121248612	C	A	SNP	SPPL3	ENST00000353487	human	ensembl	69_37n	-1	known	missense	c.101	p.R34M	1.000	NULL	pfam_Peptidase_A22B_SPP,smart_Peptidase_A22	-	no_errors	SPPL3	HGNC	ENSG00000157837	166	0	0.00	169	54	24.22	-	-	-
SPPL3	0	genome.wustl.edu	37	12	121248612	121248612	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	12	121248612	121248612	C	A	SNP	SPPL3	ENST00000353487	human	ensembl	69_37n	-1	known	missense	c.101	p.R34M	1.000	NULL	pfam_Peptidase_A22B_SPP,smart_Peptidase_A22	-	no_errors	SPPL3	HGNC	ENSG00000157837	221	0	0.00	169	54	24.22	-	-	-
STX11	0	genome.wustl.edu	37	6	144507849	144507849	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	6	144507849	144507849	C	A	SNP	STX11	ENST00000367568	human	ensembl	69_37n	+1	known	missense	c.85	p.P29T	0.000	NULL	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX11	HGNC	ENSG00000135604	20	0	0.00	68	27	28.12	-	-	-
STX11	0	genome.wustl.edu	37	6	144507849	144507849	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	6	144507849	144507849	C	A	SNP	STX11	ENST00000367568	human	ensembl	69_37n	+1	known	missense	c.85	p.P29T	0.000	NULL	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX11	HGNC	ENSG00000135604	77	0	0.00	68	27	28.12	-	-	-
TACC1	0	genome.wustl.edu	37	8	38677317	38677317	+	Silent	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	8	38677317	38677317	C	A	SNP	TACC1	ENST00000379931	human	ensembl	69_37n	+1	known	silent	c.555	p.S185	0.001	NULL	pfam_TACC	-	no_errors	TACC1	HGNC	ENSG00000147526	43	0	0.00	70	22	23.91	-	-	-
TACC1	0	genome.wustl.edu	37	8	38677317	38677317	+	Silent	SNP	C	C	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	8	38677317	38677317	C	A	SNP	TACC1	ENST00000379931	human	ensembl	69_37n	+1	known	silent	c.555	p.S185	0.001	NULL	pfam_TACC	-	no_errors	TACC1	HGNC	ENSG00000147526	120	0	0.00	70	22	23.91	-	-	-
TAF1L	0	genome.wustl.edu	37	9	32633233	32633233	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	9	32633233	32633233	A	T	SNP	TAF1L	ENST00000242310	human	ensembl	69_37n	-1	known	missense	c.2345	p.L782Q	1.000	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728	242	0	0.00	214	38	15.08	-	-	-
TAF1L	0	genome.wustl.edu	37	9	32633233	32633233	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	9	32633233	32633233	A	T	SNP	TAF1L	ENST00000242310	human	ensembl	69_37n	-1	known	missense	c.2345	p.L782Q	1.000	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728	235	0	0.00	214	38	15.08	-	-	-
TBP	0	genome.wustl.edu	37	6	170871052	170871052	+	Silent	SNP	G	G	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	6	170871052	170871052	G	A	SNP	TBP	ENST00000230354	human	ensembl	69_37n	+1	known	silent	c.228	p.Q76	0.994	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	36	0	0.00	45	10	18.18	-	-	-
THOC5	0	genome.wustl.edu	37	22	29945112	29945112	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	22	29945112	29945112	G	C	SNP	THOC5	ENST00000397871	human	ensembl	69_37n	-1	known	missense	c.25	p.R9G	1.000	NULL	pfam_THO_Thoc5	-	no_errors	THOC5	HGNC	ENSG00000100296	75	0	0.00	52	14	21.21	-	-	-
THOC5	0	genome.wustl.edu	37	22	29945112	29945112	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	22	29945112	29945112	G	C	SNP	THOC5	ENST00000397871	human	ensembl	69_37n	-1	known	missense	c.25	p.R9G	1.000	NULL	pfam_THO_Thoc5	-	no_errors	THOC5	HGNC	ENSG00000100296	152	0	0.00	52	14	21.21	-	-	-
TP53	0	genome.wustl.edu	37	17	7579359	7579359	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	17	7579359	7579359	G	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_del	c.328	p.R110fs	0.028	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	200	0	0.00	146	67	31.31	-	-	-
TP53	0	genome.wustl.edu	37	17	7579359	7579359	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	17	7579359	7579359	G	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_del	c.328	p.R110fs	0.028	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	212	0	0.00	146	67	31.31	-	-	-
TRAPPC10	0	genome.wustl.edu	37	21	45499985	45499985	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	21	45499985	45499985	C	T	SNP	TRAPPC10	ENST00000291574	human	ensembl	69_37n	+1	known	missense	c.1700	p.A567V	1.000	NULL	NULL	-	no_errors	TRAPPC10	HGNC	ENSG00000160218	39	0	0.00	87	12	12.00	-	-	-
TRAPPC10	0	genome.wustl.edu	37	21	45499985	45499985	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	21	45499985	45499985	C	T	SNP	TRAPPC10	ENST00000291574	human	ensembl	69_37n	+1	known	missense	c.1700	p.A567V	1.000	NULL	NULL	-	no_errors	TRAPPC10	HGNC	ENSG00000160218	141	0	0.00	87	12	12.00	-	-	-
TRPC4AP	0	genome.wustl.edu	37	20	33600860	33600860	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	20	33600860	33600860	A	T	SNP	TRPC4AP	ENST00000252015	human	ensembl	69_37n	-1	known	missense	c.1360	p.L454M	1.000	pfam_DUF3689	pfam_DUF3689	-	no_errors	TRPC4AP	HGNC	ENSG00000100991	44	0	0.00	46	10	17.86	-	-	-
TRPC4AP	0	genome.wustl.edu	37	20	33600860	33600860	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	20	33600860	33600860	A	T	SNP	TRPC4AP	ENST00000252015	human	ensembl	69_37n	-1	known	missense	c.1360	p.L454M	1.000	pfam_DUF3689	pfam_DUF3689	-	no_errors	TRPC4AP	HGNC	ENSG00000100991	98	0	0.00	46	10	17.86	-	-	-
TTLL6	0	genome.wustl.edu	37	17	46862448	46862448	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	17	46862448	46862448	G	T	SNP	TTLL6	ENST00000393382	human	ensembl	69_37n	-1	known	missense	c.1877	p.A626D	0.001	NULL	pfam_Tub_tyr_ligase	-	no_errors	TTLL6	HGNC	ENSG00000170703	177	0	0.00	193	33	14.60	-	-	-
TTLL6	0	genome.wustl.edu	37	17	46862448	46862448	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	17	46862448	46862448	G	T	SNP	TTLL6	ENST00000393382	human	ensembl	69_37n	-1	known	missense	c.1877	p.A626D	0.001	NULL	pfam_Tub_tyr_ligase	-	no_errors	TTLL6	HGNC	ENSG00000170703	308	0	0.00	193	33	14.60	-	-	-
UBE3A	0	genome.wustl.edu	37	15	25601182	25601182	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	15	25601182	25601182	C	-	DEL	UBE3A	ENST00000397954	human	ensembl	69_37n	-1	known	frame_shift_del	c.1990	p.D664fs	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pirsf_Ubiquitin-protein_ligase_E6-AP,pfscan_HECT	pfam_HECT,superfamily_HECT,smart_HECT,pirsf_Ubiquitin-protein_ligase_E6-AP,pfscan_HECT	-	no_errors	UBE3A	HGNC	ENSG00000114062	126	0	0.00	190	27	12.33	-	-	-
UBE3A	0	genome.wustl.edu	37	15	25601182	25601182	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	15	25601182	25601182	C	-	DEL	UBE3A	ENST00000397954	human	ensembl	69_37n	-1	known	frame_shift_del	c.1990	p.D664fs	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pirsf_Ubiquitin-protein_ligase_E6-AP,pfscan_HECT	pfam_HECT,superfamily_HECT,smart_HECT,pirsf_Ubiquitin-protein_ligase_E6-AP,pfscan_HECT	-	no_errors	UBE3A	HGNC	ENSG00000114062	205	0	0.00	190	27	12.33	-	-	-
UBQLN4	0	genome.wustl.edu	37	1	156011319	156011319	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	156011319	156011319	A	G	SNP	UBQLN4	ENST00000368309	human	ensembl	69_37n	-1	known	missense	c.1610	p.M537T	1.000	NULL	pfam_Ubiquitin,pfam_UBA/transl_elong_EF1B_N,pfam_SUMO,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN4	HGNC	ENSG00000160803	70	0	0.00	23	11	32.35	-	-	-
UBQLN4	0	genome.wustl.edu	37	1	156011319	156011319	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	156011319	156011319	A	G	SNP	UBQLN4	ENST00000368309	human	ensembl	69_37n	-1	known	missense	c.1610	p.M537T	1.000	NULL	pfam_Ubiquitin,pfam_UBA/transl_elong_EF1B_N,pfam_SUMO,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN4	HGNC	ENSG00000160803	96	0	0.00	23	11	32.35	-	-	-
USP1	0	genome.wustl.edu	37	1	62916175	62916175	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	1	62916175	62916175	G	T	SNP	USP1	ENST00000339950	human	ensembl	69_37n	+1	known	missense	c.1881	p.L627F	0.762	pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP1	HGNC	ENSG00000162607	184	0	0.00	152	25	14.12	-	-	-
USP1	0	genome.wustl.edu	37	1	62916175	62916175	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	1	62916175	62916175	G	T	SNP	USP1	ENST00000339950	human	ensembl	69_37n	+1	known	missense	c.1881	p.L627F	0.762	pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP1	HGNC	ENSG00000162607	98	0	0.00	152	25	14.12	-	-	-
VIT	0	genome.wustl.edu	37	2	36994370	36994370	+	Silent	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	2	36994370	36994370	T	C	SNP	VIT	ENST00000379242	human	ensembl	69_37n	+1	known	silent	c.621	p.A207	0.000	NULL	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	VIT	HGNC	ENSG00000205221	38	0	0.00	75	10	11.76	-	-	-
VIT	0	genome.wustl.edu	37	2	36994370	36994370	+	Silent	SNP	T	T	C			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	2	36994370	36994370	T	C	SNP	VIT	ENST00000379242	human	ensembl	69_37n	+1	known	silent	c.621	p.A207	0.000	NULL	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	VIT	HGNC	ENSG00000205221	120	0	0.00	75	10	11.76	-	-	-
ZFP64	0	genome.wustl.edu	37	20	50769075	50769076	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	20	50769075	50769076	-	G	INS	ZFP64	ENST00000216923	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1656_1655	p.Q553fs	0.000:0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP64	HGNC	ENSG00000020256	22	0	0.00	41	7	14.58	-	-	-
ZNF397	0	genome.wustl.edu	37	18	32822449	32822449	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	58a1d50c-1674-4db6-8ed7-d2aa04826142	18	32822449	32822449	T	A	SNP	ZNF397	ENST00000588119	human	ensembl	69_37n	+1	putative	missense	c.13	p.W5R	0.440	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ZNF397	HGNC	ENSG00000186812	62	0	0.00	88	14	13.73	-	-	-
ZNF397	0	genome.wustl.edu	37	18	32822449	32822449	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0C0-01A-21W-A071-09	TCGA-BH-A0C0-11A-21W-A100-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cb9d68dd-d159-4a7e-b914-18d2498b19d6	c300b8f1-4a58-4c24-87ed-07654388f249	18	32822449	32822449	T	A	SNP	ZNF397	ENST00000588119	human	ensembl	69_37n	+1	putative	missense	c.13	p.W5R	0.440	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ZNF397	HGNC	ENSG00000186812	105	0	0.00	88	14	13.73	-	-	-
