Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AFF1	0	genome.wustl.edu	37	4	87968539	87968539	+	Silent	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	4	87968539	87968539	C	T	SNP	AFF1	ENST00000395146	human	ensembl	69_37n	+1	known	silent	c.852	p.P284	0.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF1	HGNC	ENSG00000172493	42	0	0.00	52	11	17.46	-	-	-
AFF1	0	genome.wustl.edu	37	4	87968539	87968539	+	Silent	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	4	87968539	87968539	C	T	SNP	AFF1	ENST00000395146	human	ensembl	69_37n	+1	known	silent	c.852	p.P284	0.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF1	HGNC	ENSG00000172493	55	0	0.00	52	11	17.46	-	-	-
ALMS1P	0	genome.wustl.edu	37	2	73912256	73912256	+	RNA	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	2	73912256	73912256	G	A	SNP	ALMS1P	ENST00000450720	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ALMS1P	HGNC	ENSG00000163016	34	0	0.00	38	8	17.39	-	-	-
ARHGAP35	0	genome.wustl.edu	37	19	47492898	47492898	+	Silent	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	19	47492898	47492898	G	A	SNP	ARHGAP35	ENST00000404338	human	ensembl	69_37n	+1	known	silent	c.4002	p.P1334	0.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007	33	0	0.00	123	36	22.64	-	-	-
ARHGAP35	0	genome.wustl.edu	37	19	47492898	47492898	+	Silent	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	19	47492898	47492898	G	A	SNP	ARHGAP35	ENST00000404338	human	ensembl	69_37n	+1	known	silent	c.4002	p.P1334	0.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007	200	0	0.00	123	36	22.64	-	-	-
BCL9L	0	genome.wustl.edu	37	11	118778200	118778200	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	11	118778200	118778200	G	T	SNP	BCL9L	ENST00000334801	human	ensembl	69_37n	-1	known	missense	c.524	p.A175D	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	13	0	0.00	47	31	39.74	-	-	-
BCL9L	0	genome.wustl.edu	37	11	118778200	118778200	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	11	118778200	118778200	G	T	SNP	BCL9L	ENST00000334801	human	ensembl	69_37n	-1	known	missense	c.524	p.A175D	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	195	0	0.00	47	31	39.74	-	-	-
CCDC144A	0	genome.wustl.edu	37	17	16665800	16665800	+	Silent	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	17	16665800	16665800	C	T	SNP	CCDC144A	ENST00000360524	human	ensembl	69_37n	+1	known	silent	c.3840	p.Y1280	0.580	pfam_DUF3496	pfam_DUF3496	-	no_errors	CCDC144A	HGNC	ENSG00000170160	120	0	0.00	55	13	19.12	-	-	-
CCDC144A	0	genome.wustl.edu	37	17	16665800	16665800	+	Silent	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	17	16665800	16665800	C	T	SNP	CCDC144A	ENST00000360524	human	ensembl	69_37n	+1	known	silent	c.3840	p.Y1280	0.580	pfam_DUF3496	pfam_DUF3496	-	no_errors	CCDC144A	HGNC	ENSG00000170160	33	0	0.00	55	13	19.12	-	-	-
CSRNP1	0	genome.wustl.edu	37	3	39184985	39184985	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	3	39184985	39184985	T	C	SNP	CSRNP1	ENST00000273153	human	ensembl	69_37n	-1	known	missense	c.1331	p.Y444C	0.019	NULL	prints_Cys/Ser-rich_nuc_prot	-	no_errors	CSRNP1	HGNC	ENSG00000144655	117	0	0.00	52	23	30.67	-	-	-
DENND4B	0	genome.wustl.edu	37	1	153916788	153916788	+	Silent	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	1	153916788	153916788	G	A	SNP	DENND4B	ENST00000361217	human	ensembl	69_37n	-1	known	silent	c.63	p.N21	0.954	pfscan_uDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	42	0	0.00	22	10	30.30	-	-	-
EIF2A	0	genome.wustl.edu	37	3	150301029	150301029	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	3	150301029	150301029	G	A	SNP	EIF2A	ENST00000460851	human	ensembl	69_37n	+1	known	missense	c.1669	p.G557R	0.996	pirsf_TIF2A	pfam_TIF2A_beta_prop-like,pirsf_TIF2A	-	no_errors	EIF2A	HGNC	ENSG00000144895	186	0	0.00	138	28	16.87	-	-	-
EIF2A	0	genome.wustl.edu	37	3	150301029	150301029	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	3	150301029	150301029	G	A	SNP	EIF2A	ENST00000460851	human	ensembl	69_37n	+1	known	missense	c.1669	p.G557R	0.996	pirsf_TIF2A	pfam_TIF2A_beta_prop-like,pirsf_TIF2A	-	no_errors	EIF2A	HGNC	ENSG00000144895	187	0	0.00	138	28	16.87	-	-	-
FAM98B	0	genome.wustl.edu	37	15	38776827	38776827	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	15	38776827	38776827	T	A	SNP	FAM98B	ENST00000559431	human	ensembl	69_37n	+1	putative	missense	c.293	p.V98E	0.478	NULL	pfam_Uncharacterised_FAM98	-	no_start_codon:no_stop_codon:bad_bp_length_for_coding_region	FAM98B	HGNC	ENSG00000171262	33	0	0.00	85	20	19.05	-	-	-
GGT3P	0	genome.wustl.edu	37	22	18769677	18769677	+	RNA	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	22	18769677	18769677	C	T	SNP	GGT3P	ENST00000412448	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GGT3P	HGNC	ENSG00000197421	20	0	0.00	100	24	19.20	-	-	-
GPR50	0	genome.wustl.edu	37	X	150349052	150349052	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	X	150349052	150349052	C	T	SNP	GPR50	ENST00000218316	human	ensembl	69_37n	+1	known	missense	c.997	p.R333C	0.043	prints_Mel_rcpt_1X	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Mel_rcpt_1X,prints_7TM_GPCR_Rhodpsn,prints_Melatonin_rcpt,prints_NPY_rcpt	-	no_errors	GPR50	HGNC	ENSG00000102195	27	0	0.00	70	38	35.19	-	-	-
GPR50	0	genome.wustl.edu	37	X	150349052	150349052	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	X	150349052	150349052	C	T	SNP	GPR50	ENST00000218316	human	ensembl	69_37n	+1	known	missense	c.997	p.R333C	0.043	prints_Mel_rcpt_1X	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Mel_rcpt_1X,prints_7TM_GPCR_Rhodpsn,prints_Melatonin_rcpt,prints_NPY_rcpt	-	no_errors	GPR50	HGNC	ENSG00000102195	101	0	0.00	70	38	35.19	-	-	-
GRIN2A	0	genome.wustl.edu	37	16	9923469	9923469	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	16	9923469	9923469	C	T	SNP	GRIN2A	ENST00000330684	human	ensembl	69_37n	-1	known	nonsense	c.1818	p.W606*	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454	49	0	0.00	70	29	29.29	-	-	-
GRIN2A	0	genome.wustl.edu	37	16	9923469	9923469	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	16	9923469	9923469	C	T	SNP	GRIN2A	ENST00000330684	human	ensembl	69_37n	-1	known	nonsense	c.1818	p.W606*	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454	84	0	0.00	70	29	29.29	-	-	-
LINGO1	0	genome.wustl.edu	37	15	77907723	77907723	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	15	77907723	77907723	C	T	SNP	LINGO1	ENST00000355300	human	ensembl	69_37n	-1	known	missense	c.526	p.D176N	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LINGO1	HGNC	ENSG00000169783	19	0	0.00	60	12	16.67	-	-	-
LINGO1	0	genome.wustl.edu	37	15	77907723	77907723	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	15	77907723	77907723	C	T	SNP	LINGO1	ENST00000355300	human	ensembl	69_37n	-1	known	missense	c.526	p.D176N	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LINGO1	HGNC	ENSG00000169783	97	0	0.00	60	12	16.67	-	-	-
MAGI2	0	genome.wustl.edu	37	7	78636505	78636505	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	7	78636505	78636505	C	T	SNP	MAGI2	ENST00000354212	human	ensembl	69_37n	-1	known	missense	c.319	p.D107N	1.000	superfamily_PDZ,smart_Guanylate_kin/L-typ_Ca_channel	pfam_PDZ,pfam_WW_Rsp5_WWP,pfam_Guanylate_kin,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP,pfscan_Guanylate_kin	-	no_errors	MAGI2	HGNC	ENSG00000187391	91	0	0.00	128	44	25.58	-	-	-
MAGI2	0	genome.wustl.edu	37	7	78636505	78636505	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	7	78636505	78636505	C	T	SNP	MAGI2	ENST00000354212	human	ensembl	69_37n	-1	known	missense	c.319	p.D107N	1.000	superfamily_PDZ,smart_Guanylate_kin/L-typ_Ca_channel	pfam_PDZ,pfam_WW_Rsp5_WWP,pfam_Guanylate_kin,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP,pfscan_Guanylate_kin	-	no_errors	MAGI2	HGNC	ENSG00000187391	138	0	0.00	128	44	25.58	-	-	-
MLL	0	genome.wustl.edu	37	11	118371701	118371701	+	Splice_Site	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	11	118371701	118371701	G	A	SNP	MLL	ENST00000389506	human	ensembl	69_37n	+1	known	splice_site	c.6150-1	e25-1	1.000	-	-	-	no_errors	MLL	HGNC	ENSG00000118058	29	0	0.00	31	20	39.22	-	-	-
MLL	0	genome.wustl.edu	37	11	118371701	118371701	+	Splice_Site	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	11	118371701	118371701	G	A	SNP	MLL	ENST00000389506	human	ensembl	69_37n	+1	known	splice_site	c.6150-1	e25-1	1.000	-	-	-	no_errors	MLL	HGNC	ENSG00000118058	100	0	0.00	31	20	39.22	-	-	-
MLL3	0	genome.wustl.edu	37	7	151878893	151878894	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	7	151878893	151878894	-	A	INS	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	frame_shift_ins	c.6052_6051	p.Q2017fs	1.000:0.997	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	50	0	0.00	90	33	26.83	-	-	-
MLL3	0	genome.wustl.edu	37	7	151878893	151878894	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	7	151878893	151878894	-	A	INS	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	frame_shift_ins	c.6052_6051	p.Q2017fs	1.000:0.997	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	91	0	0.00	90	33	26.83	-	-	-
NFKB2	0	genome.wustl.edu	37	10	104158032	104158032	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	10	104158032	104158032	C	T	SNP	NFKB2	ENST00000189444	human	ensembl	69_37n	+1	known	missense	c.830	p.S277F	1.000	superfamily_Ig_E-set,smart_IPT_TIG_rcpt,prints_NF_Rel_dor	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like,smart_IPT_TIG_rcpt,smart_Ankyrin_rpt,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD,prints_NF_Rel_dor,prints_Ankyrin_rpt	-	no_errors	NFKB2	HGNC	ENSG00000077150	60	0	0.00	186	64	25.60	-	-	-
NFKB2	0	genome.wustl.edu	37	10	104158032	104158032	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	10	104158032	104158032	C	T	SNP	NFKB2	ENST00000189444	human	ensembl	69_37n	+1	known	missense	c.830	p.S277F	1.000	superfamily_Ig_E-set,smart_IPT_TIG_rcpt,prints_NF_Rel_dor	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like,smart_IPT_TIG_rcpt,smart_Ankyrin_rpt,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD,prints_NF_Rel_dor,prints_Ankyrin_rpt	-	no_errors	NFKB2	HGNC	ENSG00000077150	180	0	0.00	186	64	25.60	-	-	-
OR10J5	0	genome.wustl.edu	37	1	159505444	159505444	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	1	159505444	159505444	C	T	SNP	OR10J5	ENST00000334857	human	ensembl	69_37n	-1	known	missense	c.354	p.M118I	1.000	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR10J5	HGNC	ENSG00000184155	51	0	0.00	104	41	28.28	-	-	-
OR10J5	0	genome.wustl.edu	37	1	159505444	159505444	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	1	159505444	159505444	C	T	SNP	OR10J5	ENST00000334857	human	ensembl	69_37n	-1	known	missense	c.354	p.M118I	1.000	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR10J5	HGNC	ENSG00000184155	197	0	0.00	104	41	28.28	-	-	-
OR2A7	0	genome.wustl.edu	37	7	143956461	143956461	+	Silent	SNP	T	T	C			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	7	143956461	143956461	T	C	SNP	OR2A7	ENST00000493325	human	ensembl	69_37n	-1	known	silent	c.261	p.P87	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	OR2A7	HGNC	ENSG00000243896	13	0	0.00	46	12	20.69	-	-	-
PCDHGC3	0	genome.wustl.edu	37	5	140856115	140856115	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	5	140856115	140856115	T	G	SNP	PCDHGC3	ENST00000308177	human	ensembl	69_37n	+1	known	missense	c.432	p.I144M	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC3	HGNC	ENSG00000240184	25	0	0.00	41	19	31.67	-	-	-
PCDHGC3	0	genome.wustl.edu	37	5	140856115	140856115	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	5	140856115	140856115	T	G	SNP	PCDHGC3	ENST00000308177	human	ensembl	69_37n	+1	known	missense	c.432	p.I144M	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC3	HGNC	ENSG00000240184	94	0	0.00	41	19	31.67	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936092	178936092	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	3	178936092	178936092	A	C	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1634	p.E545A	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	113	0	0.00	125	35	21.88	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936092	178936092	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	3	178936092	178936092	A	C	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1634	p.E545A	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	89	0	0.00	125	35	21.88	-	-	-
PLCB4	0	genome.wustl.edu	37	20	9417740	9417740	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	20	9417740	9417740	G	T	SNP	PLCB4	ENST00000334005	human	ensembl	69_37n	+1	known	missense	c.2669	p.S890I	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_PLC-beta_CS,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,prints_Pinositol_PLipase_C,pfscan_C2_membr_targeting,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB4	HGNC	ENSG00000101333	37	0	0.00	83	14	14.29	-	-	-
PLCB4	0	genome.wustl.edu	37	20	9417740	9417740	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	20	9417740	9417740	G	T	SNP	PLCB4	ENST00000334005	human	ensembl	69_37n	+1	known	missense	c.2669	p.S890I	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_PLC-beta_CS,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,prints_Pinositol_PLipase_C,pfscan_C2_membr_targeting,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB4	HGNC	ENSG00000101333	138	0	0.00	83	14	14.29	-	-	-
PLXNB3	0	genome.wustl.edu	37	X	153041490	153041490	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	X	153041490	153041490	C	T	SNP	PLXNB3	ENST00000538966	human	ensembl	69_37n	+1	known	missense	c.4619	p.T1540M	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNB3	HGNC	ENSG00000198753	77	0	0.00	34	15	30.61	-	-	-
PXK	0	genome.wustl.edu	37	3	58398643	58398643	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	3	58398643	58398643	G	A	SNP	PXK	ENST00000356151	human	ensembl	69_37n	+1	known	missense	c.1481	p.S494N	1.000	NULL	pfam_Phox,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Phox,superfamily_Kinase-like_dom,smart_Phox,pfscan_Phox,pfscan_WH2_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	PXK	HGNC	ENSG00000168297	52	0	0.00	127	56	30.60	-	-	-
PXK	0	genome.wustl.edu	37	3	58398643	58398643	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	3	58398643	58398643	G	A	SNP	PXK	ENST00000356151	human	ensembl	69_37n	+1	known	missense	c.1481	p.S494N	1.000	NULL	pfam_Phox,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Phox,superfamily_Kinase-like_dom,smart_Phox,pfscan_Phox,pfscan_WH2_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	PXK	HGNC	ENSG00000168297	230	0	0.00	127	56	30.60	-	-	-
THSD7B	0	genome.wustl.edu	37	2	138425422	138425422	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	2	138425422	138425422	A	G	SNP	THSD7B	ENST00000272643	human	ensembl	69_37n	+1	known	missense	c.4739	p.Y1580C	1.000	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	392	0	0.00	244	51	17.29	-	-	-
THSD7B	0	genome.wustl.edu	37	2	138425422	138425422	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	2	138425422	138425422	A	G	SNP	THSD7B	ENST00000272643	human	ensembl	69_37n	+1	known	missense	c.4739	p.Y1580C	1.000	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	216	0	0.00	244	51	17.29	-	-	-
TSC22D1	0	genome.wustl.edu	37	13	45148301	45148301	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	13	45148301	45148301	G	T	SNP	TSC22D1	ENST00000458659	human	ensembl	69_37n	-1	known	missense	c.1910	p.S637Y	0.509	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D1	HGNC	ENSG00000102804	21	0	0.00	74	27	26.73	-	-	-
TSC22D1	0	genome.wustl.edu	37	13	45148301	45148301	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	13	45148301	45148301	G	T	SNP	TSC22D1	ENST00000458659	human	ensembl	69_37n	-1	known	missense	c.1910	p.S637Y	0.509	NULL	pfam_TSC-22_Dip_Bun	-	no_errors	TSC22D1	HGNC	ENSG00000102804	129	0	0.00	74	27	26.73	-	-	-
TUBD1	0	genome.wustl.edu	37	17	57958454	57958454	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	17	57958454	57958454	G	A	SNP	TUBD1	ENST00000325752	human	ensembl	69_37n	-1	known	missense	c.338	p.P113L	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Delta_tubulin,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,prints_Delta_tubulin,prints_Tubulin,prints_Epsilon_tubulin	-	no_errors	TUBD1	HGNC	ENSG00000108423	68	0	0.00	122	33	21.29	-	-	-
TUBD1	0	genome.wustl.edu	37	17	57958454	57958454	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	17	57958454	57958454	G	A	SNP	TUBD1	ENST00000325752	human	ensembl	69_37n	-1	known	missense	c.338	p.P113L	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Delta_tubulin,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,prints_Delta_tubulin,prints_Tubulin,prints_Epsilon_tubulin	-	no_errors	TUBD1	HGNC	ENSG00000108423	79	0	0.00	122	33	21.29	-	-	-
WIZ	0	genome.wustl.edu	37	19	15559037	15559037	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	19	15559037	15559037	C	T	SNP	WIZ	ENST00000389282	human	ensembl	69_37n	-1	known	missense	c.82	p.E28K	0.354	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	WIZ	HGNC	ENSG00000011451	8	0	0.00	33	13	28.26	-	-	-
WIZ	0	genome.wustl.edu	37	19	15559037	15559037	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	19	15559037	15559037	C	T	SNP	WIZ	ENST00000389282	human	ensembl	69_37n	-1	known	missense	c.82	p.E28K	0.354	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	WIZ	HGNC	ENSG00000011451	66	0	0.00	33	13	28.26	-	-	-
YJEFN3	0	genome.wustl.edu	37	19	19645891	19645891	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	19	19645891	19645891	G	A	SNP	YJEFN3	ENST00000514277	human	ensembl	69_37n	+1	known	missense	c.367	p.V123M	0.962	pfam_YjeF_N,superfamily_YjeF_N,tigrfam_YjeF_N	pfam_YjeF_N,superfamily_YjeF_N,tigrfam_YjeF_N	-	no_errors	YJEFN3	HGNC	ENSG00000250067	23	0	0.00	58	25	30.12	-	-	-
YJEFN3	0	genome.wustl.edu	37	19	19645891	19645891	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	19	19645891	19645891	G	A	SNP	YJEFN3	ENST00000514277	human	ensembl	69_37n	+1	known	missense	c.367	p.V123M	0.962	pfam_YjeF_N,superfamily_YjeF_N,tigrfam_YjeF_N	pfam_YjeF_N,superfamily_YjeF_N,tigrfam_YjeF_N	-	no_errors	YJEFN3	HGNC	ENSG00000250067	105	0	0.00	58	25	30.12	-	-	-
ZCCHC14	0	genome.wustl.edu	37	16	87446722	87446722	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	16	87446722	87446722	G	A	SNP	ZCCHC14	ENST00000561928	human	ensembl	69_37n	-1	known	nonsense	c.922	p.Q308*	0.964	NULL	pfam_Znf_CCHC,pfam_SAM_type1,superfamily_Phox,superfamily_SAM/pointed,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ZCCHC14	HGNC	ENSG00000140948	11	0	0.00	31	23	42.59	-	-	-
ZCCHC14	0	genome.wustl.edu	37	16	87446722	87446722	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	16	87446722	87446722	G	A	SNP	ZCCHC14	ENST00000561928	human	ensembl	69_37n	-1	known	nonsense	c.922	p.Q308*	0.964	NULL	pfam_Znf_CCHC,pfam_SAM_type1,superfamily_Phox,superfamily_SAM/pointed,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ZCCHC14	HGNC	ENSG00000140948	87	0	0.00	31	23	42.59	-	-	-
ZNF812	0	genome.wustl.edu	37	19	9801784	9801784	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-10A-02D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	4128dbf9-bf2a-4ff9-9b71-195541e453ac	19	9801784	9801784	A	G	SNP	ZNF812	ENST00000457674	human	ensembl	69_37n	-1	known	missense	c.395	p.I132T	0.001	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF812	HGNC	ENSG00000224689	180	0	0.00	128	42	24.71	-	-	-
ZNF812	0	genome.wustl.edu	37	19	9801784	9801784	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0DE-01A-11D-A10Y-09	TCGA-BH-A0DE-11A-23D-A10Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	bddc0994-a57b-4fd0-9b62-bf7f9f4ba403	ef386867-86e0-4f34-9dd4-1e008bf0d26b	19	9801784	9801784	A	G	SNP	ZNF812	ENST00000457674	human	ensembl	69_37n	-1	known	missense	c.395	p.I132T	0.001	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF812	HGNC	ENSG00000224689	210	0	0.00	128	42	24.71	-	-	-
