Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AK5	0	genome.wustl.edu	37	1	77984336	77984336	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	1	77984336	77984336	G	A	SNP	AK5	ENST00000354567	human	ensembl	69_37n	+1	known	missense	c.1235	p.R412H	0.761	pfam_Adenylate_kin,prints_Adenylate_kin,tigrfam_Adenylate_kin1	pfam_Adenylate_kin,pfam_Dpy-30_motif,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin,tigrfam_Adenylate_kin1	-	no_errors	AK5	HGNC	ENSG00000154027	40	0	0.00	66	21	24.14	-	-	-
APOBR	0	genome.wustl.edu	37	16	28506765	28506765	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	16	28506765	28506765	C	T	SNP	APOBR	ENST00000564831	human	ensembl	69_37n	+1	known	missense	c.403	p.H135Y	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	19	0	0.00	27	58	68.24	-	-	-
ARAF	0	genome.wustl.edu	37	X	47430836	47430836	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	X	47430836	47430836	G	A	SNP	ARAF	ENST00000377045	human	ensembl	69_37n	+1	known	missense	c.1801	p.A601T	0.983	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	ARAF	HGNC	ENSG00000078061	19	0	0.00	18	11	37.93	-	-	-
BTNL8	0	genome.wustl.edu	37	5	180377494	180377494	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	5	180377494	180377494	G	A	SNP	BTNL8	ENST00000340184	human	ensembl	69_37n	+1	known	missense	c.1453	p.E485K	0.001	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like	-	no_errors	BTNL8	HGNC	ENSG00000113303	13	0	0.00	38	26	40.62	-	-	-
C17orf97	0	genome.wustl.edu	37	17	263622	263622	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	17	263622	263622	A	G	SNP	C17orf97	ENST00000360127	human	ensembl	69_37n	+1	known	missense	c.988	p.K330E	0.000	NULL	NULL	-	no_errors	C17orf97	HGNC	ENSG00000187624	8	0	0.00	6	8	57.14	-	-	-
C1orf222	0	genome.wustl.edu	37	1	1854530	1854530	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	1	1854530	1854530	A	G	SNP	C1orf222	ENST00000493964	human	ensembl	69_37n	-1	putative	missense	c.2396	p.L799P	1.000	NULL	superfamily_PapD-like	-	no_start_codon	C1orf222	HGNC	ENSG00000142609	38	0	0.00	29	25	46.30	-	-	-
CENPBD1	0	genome.wustl.edu	37	16	90038321	90038321	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	16	90038321	90038321	C	T	SNP	CENPBD1	ENST00000314994	human	ensembl	69_37n	-1	known	missense	c.10	p.E4K	0.005	NULL	pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	-	no_errors	CENPBD1	HGNC	ENSG00000177946	11	0	0.00	2	6	66.67	-	-	-
CNOT1	0	genome.wustl.edu	37	16	58589747	58589747	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	16	58589747	58589747	T	A	SNP	CNOT1	ENST00000317147	human	ensembl	69_37n	-1	known	missense	c.2545	p.N849Y	1.000	NULL	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	92	0	0.00	101	25	19.84	-	-	-
COL9A3	0	genome.wustl.edu	37	20	61467665	61467665	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	20	61467665	61467665	A	T	SNP	COL9A3	ENST00000343916	human	ensembl	69_37n	+1	known	missense	c.1528	p.T510S	0.995	pfam_Collagen	pfam_Collagen	-	no_errors	COL9A3	HGNC	ENSG00000092758	33	0	0.00	24	22	47.83	-	-	-
DEPDC5	0	genome.wustl.edu	37	22	32188070	32188070	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	22	32188070	32188070	T	A	SNP	DEPDC5	ENST00000266091	human	ensembl	69_37n	+1	known	missense	c.676	p.Y226N	1.000	pfam_DUF3608	pfam_DUF3608,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150	120	0	0.00	125	19	13.19	-	-	-
FAM110A	0	genome.wustl.edu	37	20	826097	826097	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	20	826097	826097	G	T	SNP	FAM110A	ENST00000246100	human	ensembl	69_37n	+1	known	missense	c.650	p.R217I	0.711	NULL	NULL	-	no_errors	FAM110A	HGNC	ENSG00000125898	18	0	0.00	22	5	18.52	-	-	-
FRG2B	0	genome.wustl.edu	37	10	135439803	135439803	+	Silent	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	10	135439803	135439803	C	T	SNP	FRG2B	ENST00000443774	human	ensembl	69_37n	-1	known	silent	c.186	p.S62	0.213	NULL	NULL	-	no_errors	FRG2B	HGNC	ENSG00000225899	9	0	0.00	16	7	30.43	-	-	-
GPANK1	0	genome.wustl.edu	37	6	31631634	31631634	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	6	31631634	31631634	T	A	SNP	GPANK1	ENST00000375893	human	ensembl	69_37n	-1	known	missense	c.622	p.N208Y	0.983	pfscan_Ankyrin_rpt-contain_dom	pfam_G_patch_dom,superfamily_Ankyrin_rpt-contain_dom,smart_G_patch_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_G_patch_dom	-	no_errors	GPANK1	HGNC	ENSG00000204438	63	0	0.00	49	16	24.62	-	-	-
GREB1L	0	genome.wustl.edu	37	18	18983893	18983893	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	18	18983893	18983893	C	T	SNP	GREB1L	ENST00000424526	human	ensembl	69_37n	+1	known	missense	c.770	p.S257L	1.000	NULL	NULL	-	no_errors	GREB1L	HGNC	ENSG00000141449	98	0	0.00	232	34	12.78	-	-	-
ILF2	0	genome.wustl.edu	37	1	153635506	153635506	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	1	153635506	153635506	G	T	SNP	ILF2	ENST00000361891	human	ensembl	69_37n	-1	known	missense	c.910	p.L304I	1.000	pfam_DZF,smart_DZF	pfam_DZF,smart_DZF,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	ILF2	HGNC	ENSG00000143621	54	0	0.00	89	51	36.43	-	-	-
LRP1B	0	genome.wustl.edu	37	2	141806577	141806577	+	Silent	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	2	141806577	141806577	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	69_37n	-1	known	silent	c.1767	p.E589	0.009	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_dom,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	98	0	0.00	167	106	38.83	-	-	-
LRRC16B	0	genome.wustl.edu	37	14	24538005	24538005	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	14	24538005	24538005	C	G	SNP	LRRC16B	ENST00000342740	human	ensembl	69_37n	+1	known	missense	c.3812	p.P1271R	0.390	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	26	0	0.00	54	9	14.29	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56160644	56160644	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	5	56160644	56160644	C	-	DEL	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_del	c.918	p.R307fs	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	52	0	0.00	70	50	41.32	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56178169	56178169	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	5	56178169	56178169	C	T	SNP	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	nonsense	c.3142	p.Q1048*	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	41	0	0.00	41	25	37.88	-	-	-
PDE1B	0	genome.wustl.edu	37	12	54971012	54971012	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	12	54971012	54971012	T	A	SNP	PDE1B	ENST00000243052	human	ensembl	69_37n	+1	known	missense	c.1511	p.I504N	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1B	HGNC	ENSG00000123360	35	0	0.00	89	19	17.59	-	-	-
PEG3	0	genome.wustl.edu	37	19	57327932	57327932	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	19	57327932	57327932	C	T	SNP	PEG3	ENST00000326441	human	ensembl	69_37n	-1	known	missense	c.1878	p.M626I	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	77	0	0.00	95	58	37.91	-	-	-
PLXNB3	0	genome.wustl.edu	37	X	153032741	153032741	+	Silent	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	X	153032741	153032741	C	T	SNP	PLXNB3	ENST00000538966	human	ensembl	69_37n	+1	known	silent	c.528	p.Y176	0.624	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNB3	HGNC	ENSG00000198753	29	0	0.00	29	15	34.09	-	-	-
PRAMEF4	0	genome.wustl.edu	37	1	12942944	12942944	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	1	12942944	12942944	A	T	SNP	PRAMEF4	ENST00000235349	human	ensembl	69_37n	-1	known	missense	c.272	p.L91H	0.024	NULL	NULL	-	no_errors	PRAMEF4	HGNC	ENSG00000243073	80	0	0.00	123	77	38.50	-	-	-
PRPF19	0	genome.wustl.edu	37	11	60668993	60668993	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	11	60668993	60668993	A	C	SNP	PRPF19	ENST00000227524	human	ensembl	69_37n	-1	known	missense	c.545	p.V182G	1.000	NULL	pfam_WD40_repeat,pfam_Pre-mRNA_splic_Prp19,pfam_Ubox_domain,superfamily_WD40_repeat_dom,smart_Ubox_domain,smart_WD40_repeat,pfscan_Ricin_B_lectin,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PRPF19	HGNC	ENSG00000110107	66	0	0.00	106	40	27.40	-	-	-
PTGS1	0	genome.wustl.edu	37	9	125154645	125154645	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	9	125154645	125154645	C	T	SNP	PTGS1	ENST00000362012	human	ensembl	69_37n	+1	known	missense	c.1622	p.P541L	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_EG-like_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	PTGS1	HGNC	ENSG00000095303	37	0	0.00	72	12	14.29	-	-	-
RASGRF2	0	genome.wustl.edu	37	5	80381624	80381624	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	5	80381624	80381624	C	T	SNP	RASGRF2	ENST00000265080	human	ensembl	69_37n	+1	known	missense	c.1165	p.P389S	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF2	HGNC	ENSG00000113319	67	0	0.00	62	47	43.12	-	-	-
RNF212	0	genome.wustl.edu	37	4	1107207	1107207	+	Silent	SNP	T	T	G			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	4	1107207	1107207	T	G	SNP	RNF212	ENST00000433731	human	ensembl	69_37n	-1	known	silent	c.46	p.R16	0.000	pfscan_Znf_RING	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222	13	0	0.00	16	15	48.39	-	-	-
SLC2A4	0	genome.wustl.edu	37	17	7187613	7187613	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	17	7187613	7187613	C	T	SNP	SLC2A4	ENST00000570783	human	ensembl	69_37n	+1	known	missense	c.526	p.P176S	0.986	pfscan_MFS_dom	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,prints_Glc_transpt_4,pfscan_MFS_dom	-	no_errors	SLC2A4	HGNC	ENSG00000181856	27	0	0.00	31	16	34.04	-	-	-
TG	0	genome.wustl.edu	37	8	133984055	133984055	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	8	133984055	133984055	C	T	SNP	TG	ENST00000220616	human	ensembl	69_37n	+1	known	nonsense	c.5992	p.R1998*	0.182	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	71	0	0.00	207	56	21.21	-	-	-
TMED2	0	genome.wustl.edu	37	12	124081212	124081212	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	12	124081212	124081212	T	A	SNP	TMED2	ENST00000262225	human	ensembl	69_37n	+1	known	missense	c.542	p.V181D	1.000	pfam_GOLD	pfam_GOLD,superfamily_GOLD,pfscan_GOLD	-	no_errors	TMED2	HGNC	ENSG00000086598	89	0	0.00	109	71	39.44	-	-	-
ZGPAT	0	genome.wustl.edu	37	20	62366833	62366833	+	Silent	SNP	G	G	T			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	20	62366833	62366833	G	T	SNP	ZGPAT	ENST00000328969	human	ensembl	69_37n	+1	known	silent	c.1374	p.R458	0.944	NULL	pfam_G_patch_dom,smart_Znf_CCCH,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	ZGPAT	HGNC	ENSG00000197114	17	0	0.00	22	15	40.54	-	-	-
ZNF462	0	genome.wustl.edu	37	9	109771899	109771899	+	Silent	SNP	G	G	A			TCGA-BH-A1F5-01A-12D-A13L-09	TCGA-BH-A1F5-11A-43D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	82121518-98d6-4db6-8be4-74bbe232a9ed	7165c7b4-d552-496f-a2cd-5afe7c99bbea	9	109771899	109771899	G	A	SNP	ZNF462	ENST00000457913	human	ensembl	69_37n	+1	known	silent	c.7443	p.R2481	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143	89	0	0.00	96	95	49.74	-	-	-
