Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTL6B	0	genome.wustl.edu	37	7	100244424	100244424	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	7	100244424	100244424	C	G	SNP	ACTL6B	ENST00000160382	human	ensembl	69_37n	-1	known	missense	c.967	p.G323R	1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTL6B	HGNC	ENSG00000077080	9	0	0.00	18	9	33.33	-	-	-
ADAMTS7	0	genome.wustl.edu	37	15	79058631	79058631	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	15	79058631	79058631	G	T	SNP	ADAMTS7	ENST00000388820	human	ensembl	69_37n	-1	known	missense	c.3622	p.P1208T	0.001	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378	12	0	0.00	15	15	50.00	-	-	-
AMBRA1	0	genome.wustl.edu	37	11	46419045	46419045	+	Silent	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	11	46419045	46419045	G	A	SNP	AMBRA1	ENST00000458649	human	ensembl	69_37n	-1	known	silent	c.3852	p.S1284	0.994	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AMBRA1	HGNC	ENSG00000110497	59	0	0.00	77	22	22.22	-	-	-
ATXN7	0	genome.wustl.edu	37	3	63981414	63981414	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	3	63981414	63981414	G	C	SNP	ATXN7	ENST00000398590	human	ensembl	69_37n	+1	known	missense	c.1916	p.C639S	1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7	HGNC	ENSG00000163635	95	0	0.00	149	87	36.86	-	-	-
BRD3	0	genome.wustl.edu	37	9	136918532	136918532	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	9	136918532	136918532	G	A	SNP	BRD3	ENST00000303407	human	ensembl	69_37n	-1	known	missense	c.68	p.P23L	1.000	superfamily_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD3	HGNC	ENSG00000169925	29	0	0.00	14	31	68.89	-	-	-
C3orf55	0	genome.wustl.edu	37	3	157289743	157289743	+	Splice_Site	SNP	G	G	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	3	157289743	157289743	G	T	SNP	C3orf55	ENST00000449199	human	ensembl	69_37n	+1	known	splice_site	c.214-1	e3-1	0.008	-	-	-	no_errors	C3orf55	HGNC	ENSG00000174899	82	0	0.00	144	107	42.46	-	-	-
CCDC23	0	genome.wustl.edu	37	1	43282112	43282112	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	1	43282112	43282112	T	C	SNP	CCDC23	ENST00000372521	human	ensembl	69_37n	-1	known	missense	c.104	p.Q35R	1.000	NULL	NULL	-	no_errors	CCDC23	HGNC	ENSG00000177868	128	0	0.00	203	133	39.58	-	-	-
CTCF	0	genome.wustl.edu	37	16	67644736	67644736	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	16	67644736	67644736	A	G	SNP	CTCF	ENST00000264010	human	ensembl	69_37n	+1	known	missense	c.1	p.M1V	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCF	HGNC	ENSG00000102974	9	0	0.00	10	10	50.00	-	-	-
DSC1	0	genome.wustl.edu	37	18	28714069	28714069	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	18	28714069	28714069	C	T	SNP	DSC1	ENST00000257198	human	ensembl	69_37n	-1	known	missense	c.1901	p.R634Q	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_pro_dom,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Desmocollin,prints_Cadherin,prints_Desmo_cadherin	-	no_errors	DSC1	HGNC	ENSG00000134765	30	0	0.00	59	41	41.00	-	-	-
EXOSC9	0	genome.wustl.edu	37	4	122735146	122735146	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	4	122735146	122735146	T	C	SNP	EXOSC9	ENST00000379663	human	ensembl	69_37n	+1	known	missense	c.1100	p.I367T	0.980	NULL	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2	-	no_errors	EXOSC9	HGNC	ENSG00000123737	39	0	0.00	65	42	39.25	-	-	-
FAM214A	0	genome.wustl.edu	37	15	52879367	52879367	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	15	52879367	52879367	G	A	SNP	FAM214A	ENST00000261844	human	ensembl	69_37n	-1	known	missense	c.2858	p.P953L	1.000	NULL	NULL	-	no_errors	FAM214A	HGNC	ENSG00000047346	45	0	0.00	98	51	34.23	-	-	-
FOXG1	0	genome.wustl.edu	37	14	29237628	29237628	+	Silent	SNP	C	C	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	14	29237628	29237628	C	T	SNP	FOXG1	ENST00000313071	human	ensembl	69_37n	+1	known	silent	c.1143	p.A381	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165	15	0	0.00	11	13	54.17	-	-	-
GAP43	0	genome.wustl.edu	37	3	115439676	115439676	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	3	115439676	115439676	C	T	SNP	GAP43	ENST00000305124	human	ensembl	69_37n	+1	known	missense	c.664	p.R222W	1.000	pfam_Neuromodulin_C	pfam_Neuromodulin_C,pfam_Neuromodulin_gap-junction_N,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Neuromodulin,pfscan_IQ_motif_EF-hand-BS	-	no_errors	GAP43	HGNC	ENSG00000172020	65	0	0.00	95	65	40.62	-	-	-
GATA3	0	genome.wustl.edu	37	10	8111433	8111434	+	Splice_Site	DEL	CA	CA	-			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	10	8111433	8111434	CA	-	DEL	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	splice_site_del	c.925-3_925-2	e4-2	1.000:1.000	-	-	-	no_errors	GATA3	HGNC	ENSG00000107485	43	0	0	63	38	36.54	-	-	-
HCFC2	0	genome.wustl.edu	37	12	104495851	104495851	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	12	104495851	104495851	G	C	SNP	HCFC2	ENST00000229330	human	ensembl	69_37n	+1	known	missense	c.1984	p.G662R	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	HCFC2	HGNC	ENSG00000111727	79	0	0.00	123	75	37.88	-	-	-
KAT2B	0	genome.wustl.edu	37	3	20167590	20167590	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	3	20167590	20167590	G	A	SNP	KAT2B	ENST00000263754	human	ensembl	69_37n	+1	known	missense	c.1607	p.R536Q	1.000	pirsf_Hist_acetylase_PCAF,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom,prints_Bromodomain	-	no_errors	KAT2B	HGNC	ENSG00000114166	22	0	0.00	43	40	48.19	-	-	-
KDM4C	0	genome.wustl.edu	37	9	6805599	6805599	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	9	6805599	6805599	G	C	SNP	KDM4C	ENST00000381309	human	ensembl	69_37n	+1	known	missense	c.145	p.V49L	1.000	pfam_TF_JmjN,smart_TF_JmjN,pfscan_TF_JmjN	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077	11	0	0.00	20	22	52.38	-	-	-
LIMS1	0	genome.wustl.edu	37	2	109300418	109300418	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	2	109300418	109300418	G	T	SNP	LIMS1	ENST00000542845	human	ensembl	69_37n	+1	known	missense	c.1127	p.R376I	1.000	pirsf_PINCH	pfam_Znf_LIM,smart_Znf_LIM,pirsf_PINCH,pfscan_Znf_LIM	-	no_errors	LIMS1	HGNC	ENSG00000169756	43	0	0.00	86	24	21.82	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56160679	56160680	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	5	56160679	56160680	-	A	INS	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.953_954	p.L319fs	0.965:0.937	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	50	0	0.00	69	120	63.49	-	-	-
MARS	0	genome.wustl.edu	37	12	57894289	57894289	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	12	57894289	57894289	A	T	SNP	MARS	ENST00000262027	human	ensembl	69_37n	+1	known	missense	c.1277	p.N426I	1.000	pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Met-tRNA_synth	pfam_Methionyl/Leucyl_tRNA_Synth,pfam_WHEP-TRS,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_S15_NS1_RNA-bd,superfamily_Thioredoxin-like_fold,pfscan_WHEP-TRS,prints_Met-tRNA_synth,tigrfam_Met-tRNA_synth	-	no_errors	MARS	HGNC	ENSG00000166986	59	0	0.00	62	54	46.55	-	-	-
MLL3	0	genome.wustl.edu	37	7	151841851	151841852	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	7	151841851	151841852	-	CC	INS	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	frame_shift_ins	c.14461_14460	p.K4820fs	0.999:1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	99	0	0.00	192	121	38.66	-	-	-
MTUS2	0	genome.wustl.edu	37	13	29608146	29608146	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	13	29608146	29608146	G	A	SNP	MTUS2	ENST00000431530	human	ensembl	69_37n	+1	known	missense	c.2360	p.R787H	0.992	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	73	0	0.00	97	84	46.41	-	-	-
NCKAP1L	0	genome.wustl.edu	37	12	54902260	54902260	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	12	54902260	54902260	C	T	SNP	NCKAP1L	ENST00000293373	human	ensembl	69_37n	+1	known	missense	c.451	p.R151W	0.997	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338	61	0	0.00	164	37	18.41	-	-	-
NEUROD2	0	genome.wustl.edu	37	17	37761947	37761948	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	17	37761947	37761948	-	G	INS	NEUROD2	ENST00000302584	human	ensembl	69_37n	-1	known	frame_shift_ins	c.906_905	p.L303fs	1.000:1.000	pfam_Neurogenic_DUF,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pirsf_TF_bHLH_NeuroD,pfscan_HLH_DNA-bd	-	no_errors	NEUROD2	HGNC	ENSG00000171532	27	0	0.00	27	12	30.77	-	-	-
NFE2L2	0	genome.wustl.edu	37	2	178098009	178098009	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	2	178098009	178098009	G	C	SNP	NFE2L2	ENST00000397062	human	ensembl	69_37n	-1	known	missense	c.371	p.A124G	1.000	NULL	pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,superfamily_Sepin_dom,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L2	HGNC	ENSG00000116044	92	0	0.00	72	54	42.52	-	-	-
NHSL1	0	genome.wustl.edu	37	6	138752045	138752045	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	6	138752045	138752045	C	-	DEL	NHSL1	ENST00000427025	human	ensembl	69_37n	-1	known	frame_shift_del	c.3449	p.S1150fs	0.029	NULL	NULL	-	no_errors	NHSL1	HGNC	ENSG00000135540	23	0	0.00	27	17	38.64	-	-	-
P4HTM	0	genome.wustl.edu	37	3	49044240	49044240	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	3	49044240	49044240	T	C	SNP	P4HTM	ENST00000343546	human	ensembl	69_37n	+1	known	missense	c.1592	p.F531S	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	P4HTM	HGNC	ENSG00000178467	8	0	0.00	16	10	38.46	-	-	-
PCDH19	0	genome.wustl.edu	37	X	99662740	99662740	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	X	99662740	99662740	G	A	SNP	PCDH19	ENST00000373034	human	ensembl	69_37n	-1	known	missense	c.856	p.R286C	0.115	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194	77	0	0.00	60	59	49.58	-	-	-
PLD3	0	genome.wustl.edu	37	19	40883954	40883954	+	Silent	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	19	40883954	40883954	G	A	SNP	PLD3	ENST00000356508	human	ensembl	69_37n	+1	known	silent	c.1347	p.T449	0.495	NULL	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD3	HGNC	ENSG00000105223	15	0	0.00	14	16	53.33	-	-	-
PLEKHM1P	0	genome.wustl.edu	37	17	62796759	62796759	+	RNA	SNP	A	A	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	17	62796759	62796759	A	C	SNP	PLEKHM1P	ENST00000578036	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PLEKHM1P	HGNC	ENSG00000214176	10	0	0.00	15	10	40.00	-	-	-
PSMA3	0	genome.wustl.edu	37	14	58737668	58737668	+	Missense_Mutation	SNP	T	T	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	14	58737668	58737668	T	A	SNP	PSMA3	ENST00000216455	human	ensembl	69_37n	+1	known	missense	c.675	p.H225Q	1.000	NULL	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA3	HGNC	ENSG00000100567	15	0	0.00	49	26	34.67	-	-	-
RGPD4	0	genome.wustl.edu	37	2	108479165	108479165	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	2	108479165	108479165	G	C	SNP	RGPD4	ENST00000354986	human	ensembl	69_37n	+1	known	missense	c.2233	p.E745Q	1.000	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR-1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862	9	0	0.00	3	7	70.00	-	-	-
SAP18	0	genome.wustl.edu	37	13	21714920	21714920	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	13	21714920	21714920	G	A	SNP	SAP18	ENST00000450573	human	ensembl	69_37n	+1	putative	missense	c.8	p.G3D	0.000	NULL	pfam_SAP18	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SAP18	HGNC	ENSG00000150459	8	0	0.00	11	6	35.29	-	-	-
SEC23IP	0	genome.wustl.edu	37	10	121674317	121674317	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	10	121674317	121674317	G	A	SNP	SEC23IP	ENST00000369075	human	ensembl	69_37n	+1	known	missense	c.1388	p.S463N	1.000	NULL	pfam_DDHD,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_DDHD	-	no_errors	SEC23IP	HGNC	ENSG00000107651	237	0	0.00	368	217	36.90	-	-	-
SLC26A6	0	genome.wustl.edu	37	3	48668568	48668568	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	3	48668568	48668568	A	C	SNP	SLC26A6	ENST00000395550	human	ensembl	69_37n	-1	known	missense	c.992	p.V331G	0.007	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A6	HGNC	ENSG00000225697	36	0	0.00	45	6	11.76	-	-	-
TAB3	0	genome.wustl.edu	37	X	30872398	30872398	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	X	30872398	30872398	C	T	SNP	TAB3	ENST00000288422	human	ensembl	69_37n	-1	known	missense	c.1384	p.A462T	1.000	NULL	pfam_CUE,pfam_Znf_RanBP2,superfamily_UBA-like,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB3	HGNC	ENSG00000157625	75	0	0.00	107	38	26.21	-	-	-
TBX3	0	genome.wustl.edu	37	12	115118782	115118782	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	12	115118782	115118782	G	A	SNP	TBX3	ENST00000257566	human	ensembl	69_37n	-1	known	missense	c.559	p.H187Y	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX3	HGNC	ENSG00000135111	37	0	0.00	61	37	37.76	-	-	-
TRIM49C	0	genome.wustl.edu	37	11	89774252	89774252	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	11	89774252	89774252	G	A	SNP	TRIM49C	ENST00000448984	human	ensembl	69_37n	+1	known	missense	c.893	p.S298N	0.001	superfamily_ConA-like_lec_gl,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM49C	HGNC	ENSG00000204449	13	0	0.00	23	8	25.81	-	-	-
UGT1A4	0	genome.wustl.edu	37	2	234680995	234680995	+	Silent	SNP	T	T	C			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	2	234680995	234680995	T	C	SNP	UGT1A4	ENST00000373409	human	ensembl	69_37n	+1	known	silent	c.1395	p.F465	0.994	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A4	HGNC	ENSG00000244474	25	0	0.00	47	47	49.47	-	-	-
USP24	0	genome.wustl.edu	37	1	55589159	55589159	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	1	55589159	55589159	G	A	SNP	USP24	ENST00000294383	human	ensembl	69_37n	-1	known	missense	c.4237	p.L1413F	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19,superfamily_UBA-like,superfamily_ARM-type_fold,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19	-	no_errors	USP24	HGNC	ENSG00000162402	35	0	0.00	66	39	36.79	-	-	-
VSIG8	0	genome.wustl.edu	37	1	159828685	159828685	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1X6-01A-11D-A14K-09	TCGA-D8-A1X6-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1951aa38-481b-464c-9a78-0819312a0a93	4a4bd36e-5543-429f-aabe-a9811e0df7ae	1	159828685	159828685	G	A	SNP	VSIG8	ENST00000368100	human	ensembl	69_37n	-1	known	missense	c.67	p.R23W	1.000	pfscan_Ig-like	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	VSIG8	HGNC	ENSG00000243284	18	0	0.00	34	23	40.35	-	-	-
