Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ALPP	0	genome.wustl.edu	37	2	233243713	233243713	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	233243713	233243713	G	A	SNP	ALPP	ENST00000392027	human	ensembl	69_37n	+1	known	missense	c.109	p.E37K	0.035	superfamily_Alkaline_phosphatase_core	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPP	HGNC	ENSG00000163283	136	1	0.73	90	32	26.23	-	-	-
BIRC6	0	genome.wustl.edu	37	2	32774504	32774504	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	32774504	32774504	C	T	SNP	BIRC6	ENST00000421745	human	ensembl	69_37n	+1	known	missense	c.13100	p.S4367F	1.000	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	54	0	0.00	63	14	18.18	-	-	-
BRWD1	0	genome.wustl.edu	37	21	40597087	40597087	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	21	40597087	40597087	C	G	SNP	BRWD1	ENST00000333229	human	ensembl	69_37n	-1	known	missense	c.3245	p.W1082S	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	BRWD1	HGNC	ENSG00000185658	36	0	0.00	15	3	16.67	-	-	-
C14orf159	0	genome.wustl.edu	37	14	91681803	91681803	+	Nonsense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	14	91681803	91681803	C	G	SNP	C14orf159	ENST00000256324	human	ensembl	69_37n	+1	known	nonsense	c.1619	p.S540*	0.053	pirsf_UPF0317_mt	pfam_DUF1445,pirsf_UPF0317_mt	-	no_errors	C14orf159	HGNC	ENSG00000133943	89	0	0.00	43	23	34.85	-	-	-
C5orf44	0	genome.wustl.edu	37	5	64925401	64925401	+	RNA	SNP	T	T	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	64925401	64925401	T	A	SNP	C5orf44	ENST00000514404	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.687	-	-	-	no_errors	C5orf44	HGNC	ENSG00000113597	39	0	0.00	5	14	73.68	-	-	-
CACNB2	0	genome.wustl.edu	37	10	18803948	18803948	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	10	18803948	18803948	C	T	SNP	CACNB2	ENST00000352115	human	ensembl	69_37n	+1	known	missense	c.710	p.A237V	1.000	superfamily_SH3_domain	pfam_Guanylate_kin,pfam_VDCC_L_bsu,superfamily_SH3_domain,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_SH3_domain,prints_VDCC_L_bsu,prints_VDCC_L_b2su	-	no_errors	CACNB2	HGNC	ENSG00000165995	41	0	0.00	54	6	10.00	-	-	-
CALML3	0	genome.wustl.edu	37	10	5567450	5567450	+	Silent	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	10	5567450	5567450	C	T	SNP	CALML3	ENST00000315238	human	ensembl	69_37n	+1	known	silent	c.402	p.D134	0.849	pfam_EF-hand,pfam_EF-hand_Ca_insen,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	pfam_EF-hand,pfam_EF-hand_Ca_insen,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	CALML3	HGNC	ENSG00000178363	34	0	0.00	51	7	12.07	-	-	-
CC2D1A	0	genome.wustl.edu	37	19	14029770	14029770	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	14029770	14029770	G	A	SNP	CC2D1A	ENST00000318003	human	ensembl	69_37n	+1	known	missense	c.1064	p.R355Q	1.000	smart_DM14	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_DM14,smart_C2_Ca-dep	-	no_errors	CC2D1A	HGNC	ENSG00000132024	86	0	0.00	145	21	12.65	-	-	-
CC2D1A	0	genome.wustl.edu	37	19	14030750	14030750	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	14030750	14030750	G	A	SNP	CC2D1A	ENST00000318003	human	ensembl	69_37n	+1	known	missense	c.1342	p.E448K	0.980	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_DM14,smart_C2_Ca-dep	-	no_errors	CC2D1A	HGNC	ENSG00000132024	53	0	0.00	57	13	18.57	-	-	-
CCDC169	0	genome.wustl.edu	37	13	36855373	36855373	+	RNA	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	13	36855373	36855373	C	G	SNP	CCDC169	ENST00000477250	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CCDC169	HGNC	ENSG00000242715	8	0	0.00	3	8	72.73	-	-	-
CCDC85B	0	genome.wustl.edu	37	11	65658674	65658674	+	Silent	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	65658674	65658674	C	T	SNP	CCDC85B	ENST00000312579	human	ensembl	69_37n	+1	known	silent	c.420	p.L140	1.000	pfam_DUF2216_coiled-coil	pfam_DUF2216_coiled-coil	-	no_errors	CCDC85B	HGNC	ENSG00000175602	20	0	0.00	16	7	30.43	-	-	-
CD247	0	genome.wustl.edu	37	1	167404209	167404210	+	RNA	INS	-	-	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	1	167404209	167404210	-	T	INS	CD247	ENST00000483825	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CD247	HGNC	ENSG00000198821	47	0	0.00	41	6	12.77	-	-	-
CDT1	0	genome.wustl.edu	37	16	88872978	88872978	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	16	88872978	88872978	G	T	SNP	CDT1	ENST00000301019	human	ensembl	69_37n	+1	known	missense	c.1018	p.V340L	1.000	pfam_CDT1_Gemini-bd-like	pfam_CDT1_Gemini-bd-like	-	no_errors	CDT1	HGNC	ENSG00000167513	36	0	0.00	31	11	26.19	-	-	-
CPNE4	0	genome.wustl.edu	37	3	131268919	131268919	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	3	131268919	131268919	G	A	SNP	CPNE4	ENST00000502818	human	ensembl	69_37n	-1	known	nonsense	c.1228	p.Q410*	1.000	pfam_Copine,smart_VWF_A	pfam_Copine,pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_VWF_A,pfscan_C2_membr_targeting	-	no_errors	CPNE4	HGNC	ENSG00000196353	46	0	0.00	19	5	20.83	-	-	-
CRYL1	0	genome.wustl.edu	37	13	21013828	21013828	+	Frame_Shift_Del	DEL	A	A	-			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	13	21013828	21013828	A	-	DEL	CRYL1	ENST00000298248	human	ensembl	69_37n	-1	known	frame_shift_del	c.342	p.D114fs	0.001	pfam_3-OHacyl-CoA_DH_NAD-bd	pfam_3-OHacyl-CoA_DH_NAD-bd,pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like	-	no_errors	CRYL1	HGNC	ENSG00000165475	24	0	0.00	19	6	23.08	-	-	-
DAB2	0	genome.wustl.edu	37	5	39377343	39377343	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	39377343	39377343	T	C	SNP	DAB2	ENST00000320816	human	ensembl	69_37n	-1	known	missense	c.1546	p.T516A	0.000	NULL	pfam_PTyr_interaction_dom,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom	-	no_errors	DAB2	HGNC	ENSG00000153071	33	0	0.00	25	10	28.57	-	-	-
DCAF10	0	genome.wustl.edu	37	9	37862230	37862230	+	RNA	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	9	37862230	37862230	C	G	SNP	DCAF10	ENST00000483167	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DCAF10	HGNC	ENSG00000122741	43	0	0.00	34	6	15.00	-	-	-
DDR1	0	genome.wustl.edu	37	6	30859162	30859162	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	6	30859162	30859162	C	T	SNP	DDR1	ENST00000376575	human	ensembl	69_37n	+1	known	missense	c.571	p.L191F	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	DDR1	HGNC	ENSG00000204580	47	0	0.00	55	10	15.38	-	-	-
DDX1	0	genome.wustl.edu	37	2	15761226	15761226	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	15761226	15761226	G	C	SNP	DDX1	ENST00000233084	human	ensembl	69_37n	+1	known	missense	c.1433	p.G478A	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_SPRY_rcpt,pfam_Helicase_C,superfamily_ConA-like_lec_gl,smart_Helicase_ATP-bd,smart_SPla/RYanodine_receptor_subgr,smart_Helicase_C,pfscan_B30.2/SPRY,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX1	HGNC	ENSG00000079785	34	0	0.00	39	10	20.41	-	-	-
DDX21	0	genome.wustl.edu	37	10	70728850	70728850	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	10	70728850	70728850	G	C	SNP	DDX21	ENST00000354185	human	ensembl	69_37n	+1	known	missense	c.1209	p.K403N	1.000	smart_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_GUCT,pfam_Helicase_C,pfam_Helicase/UvrB_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX21	HGNC	ENSG00000165732	49	0	0.00	20	8	28.57	-	-	-
DDX60	0	genome.wustl.edu	37	4	169227774	169227774	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	4	169227774	169227774	G	C	SNP	DDX60	ENST00000393743	human	ensembl	69_37n	-1	known	missense	c.362	p.T121R	0.759	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX60	HGNC	ENSG00000137628	37	0	0.00	9	16	64.00	-	-	-
DEPDC5	0	genome.wustl.edu	37	22	32289734	32289734	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	22	32289734	32289734	G	T	SNP	DEPDC5	ENST00000266091	human	ensembl	69_37n	+1	known	missense	c.4134	p.E1378D	1.000	NULL	pfam_DUF3608,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150	34	0	0.00	2	16	88.89	-	-	-
DGAT2	0	genome.wustl.edu	37	11	75508201	75508201	+	Splice_Site	SNP	A	A	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	75508201	75508201	A	T	SNP	DGAT2	ENST00000228027	human	ensembl	69_37n	+1	known	splice_site	c.635-2	e6-2	1.000	-	-	-	no_errors	DGAT2	HGNC	ENSG00000062282	51	0	0	49	8	14.04	-	-	-
DNAH17	0	genome.wustl.edu	37	17	76565585	76565585	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	17	76565585	76565585	C	G	SNP	DNAH17	ENST00000389840	human	ensembl	69_37n	-1	known	missense	c.1069	p.E357Q	0.973	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775	62	0	0.00	41	21	33.87	-	-	-
DNAJB12	0	genome.wustl.edu	37	10	74096348	74096348	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	10	74096348	74096348	C	G	SNP	DNAJB12	ENST00000338820	human	ensembl	69_37n	-1	known	missense	c.1042	p.E348Q	0.999	pfam_DUF1977_DnaJ-like	pfam_DUF1977_DnaJ-like,pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,prints_Hsp_DnaJ,pfscan_DnaJ_N	-	no_errors	DNAJB12	HGNC	ENSG00000148719	73	0	0.00	32	4	11.11	-	-	-
ENDOV	0	genome.wustl.edu	37	17	78389493	78389493	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	17	78389493	78389493	G	A	SNP	ENDOV	ENST00000518137	human	ensembl	69_37n	+1	known	missense	c.100	p.E34K	0.979	NULL	pfam_Endonuclease-V	-	no_errors	ENDOV	HGNC	ENSG00000173818	62	0	0.00	35	13	27.08	-	-	-
ENSG00000242294	0	genome.wustl.edu	37	7	99933775	99933775	+	RNA	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	7	99933775	99933775	G	C	SNP	ENSG00000242294	ENST00000414292	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.024	-	-	-	no_errors	CTB-161A2.3	Clone_based_vega_gene	ENSG00000242294	134	0	0.00	90	22	19.64	-	-	-
EPB41L3	0	genome.wustl.edu	37	18	5577341	5577342	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	18	5577341	5577342	AG	-	DEL	EPB41L3	ENST00000582592	human	ensembl	69_37n	-1	putative	frame_shift_del	c.43_42	p.L15fs	0.995:1.000	NULL	NULL	-	no_stop_codon:bad_bp_length_for_coding_region	EPB41L3	HGNC	ENSG00000082397	15	0	0.00	2	2	50.00	-	-	-
FABP6	0	genome.wustl.edu	37	5	159661862	159661862	+	Silent	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	159661862	159661862	G	A	SNP	FABP6	ENST00000393980	human	ensembl	69_37n	+1	known	silent	c.426	p.V142	0.000	superfamily_Calycin-like	superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	FABP6	HGNC	ENSG00000170231	92	0	0.00	52	27	33.75	-	-	-
FAHD2A	0	genome.wustl.edu	37	2	96071355	96071355	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	96071355	96071355	C	T	SNP	FAHD2A	ENST00000233379	human	ensembl	69_37n	+1	known	nonsense	c.49	p.Q17*	0.962	NULL	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	-	no_errors	FAHD2A	HGNC	ENSG00000115042	117	0	0.00	187	27	12.62	-	-	-
FAM115C	0	genome.wustl.edu	37	7	143417625	143417625	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	7	143417625	143417625	G	C	SNP	FAM115C	ENST00000518791	human	ensembl	69_37n	+1	putative	missense	c.916	p.G306R	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	FAM115C	HGNC	ENSG00000170379	32	0	0.00	1	2	66.67	-	-	-
FAM75D5	0	genome.wustl.edu	37	9	84534225	84534225	+	RNA	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	9	84534225	84534225	C	T	SNP	FAM75D5	ENST00000527857	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM75D5	HGNC	ENSG00000240632	32	0	0.00	8	14	63.64	-	-	-
FAT2	0	genome.wustl.edu	37	5	150946114	150946114	+	Silent	SNP	A	A	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	150946114	150946114	A	G	SNP	FAT2	ENST00000261800	human	ensembl	69_37n	-1	known	silent	c.2379	p.Y793	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	72	0	0.00	7	43	86.00	-	-	-
FBXW7	0	genome.wustl.edu	37	4	153249385	153249385	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	4	153249385	153249385	G	A	SNP	FBXW7	ENST00000281708	human	ensembl	69_37n	-1	known	missense	c.1393	p.R465C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom_cyclin-like,superfamily_WD40_repeat_dom,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_F-box_dom_cyclin-like,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FBXW7	HGNC	ENSG00000109670	65	0	0.00	8	45	84.91	-	-	-
FCRL1	0	genome.wustl.edu	37	1	157771340	157771340	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	1	157771340	157771340	A	C	SNP	FCRL1	ENST00000368176	human	ensembl	69_37n	-1	known	missense	c.914	p.L305R	0.055	NULL	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	FCRL1	HGNC	ENSG00000163534	36	0	0.00	36	13	26.53	-	-	-
FOCAD	0	genome.wustl.edu	37	9	20944725	20944725	+	Silent	SNP	G	G	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	9	20944725	20944725	G	T	SNP	FOCAD	ENST00000338382	human	ensembl	69_37n	+1	known	silent	c.3507	p.L1169	0.979	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352	105	0	0.00	79	17	17.71	-	-	-
FOXR2	0	genome.wustl.edu	37	X	55650935	55650935	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	X	55650935	55650935	G	C	SNP	FOXR2	ENST00000339140	human	ensembl	69_37n	+1	known	missense	c.791	p.R264T	0.002	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXR2	HGNC	ENSG00000189299	26	0	0.00	15	11	42.31	-	-	-
GEMIN5	0	genome.wustl.edu	37	5	154316741	154316741	+	Silent	SNP	T	T	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	154316741	154316741	T	G	SNP	GEMIN5	ENST00000285873	human	ensembl	69_37n	-1	known	silent	c.171	p.I57	1.000	pfam_WD40_repeat,smart_WD40_repeat	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	GEMIN5	HGNC	ENSG00000082516	84	0	0.00	32	19	37.25	-	-	-
GRIK4	0	genome.wustl.edu	37	11	120852906	120852906	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	120852906	120852906	G	A	SNP	GRIK4	ENST00000527524	human	ensembl	69_37n	+1	known	nonsense	c.2487	p.W829*	1.000	prints_NMDA_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK4	HGNC	ENSG00000149403	74	0	0.00	68	16	19.05	-	-	-
HERC2	0	genome.wustl.edu	37	15	28436380	28436380	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	15	28436380	28436380	C	G	SNP	HERC2	ENST00000261609	human	ensembl	69_37n	-1	known	missense	c.8462	p.R2821P	1.000	pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5,superfamily_UBA-like,superfamily_CUB,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	28	0	0.00	13	3	18.75	-	-	-
HLX	0	genome.wustl.edu	37	1	221054585	221054585	+	Silent	SNP	A	A	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	1	221054585	221054585	A	C	SNP	HLX	ENST00000366903	human	ensembl	69_37n	+1	known	silent	c.642	p.S214	0.003	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	HLX	HGNC	ENSG00000136630	67	0	0.00	56	11	16.18	-	-	-
IGF2R	0	genome.wustl.edu	37	6	160484554	160484554	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	6	160484554	160484554	C	T	SNP	IGF2R	ENST00000356956	human	ensembl	69_37n	+1	known	missense	c.3778	p.R1260W	0.997	pfam_CIMR,superfamily_Man6P_isomerase_rcpt-bd_dom	pfam_CIMR,pfam_FN_type2_col-bd,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	-	no_errors	IGF2R	HGNC	ENSG00000197081	36	0	0.00	43	6	12.24	-	-	-
IGHA2	0	genome.wustl.edu	37	14	106053516	106053516	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	14	106053516	106053516	C	T	SNP	IGHA2	ENST00000390539	human	ensembl	69_37n	-1	known	missense	c.781	p.E261K	0.000	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like	-	no_start_codon	IGHA2	HGNC	ENSG00000211890	53	0	0.00	14	15	51.72	-	-	-
INF2	0	genome.wustl.edu	37	14	105173281	105173281	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	14	105173281	105173281	C	T	SNP	INF2	ENST00000392634	human	ensembl	69_37n	+1	known	missense	c.878	p.S293L	1.000	pfam_Drf_FH3,superfamily_ARM-type_fold	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,pfam_WH2_dom,superfamily_FH2_actin-bd,superfamily_ARM-type_fold,smart_Actin-bd_FH2/DRF_autoreg,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485	19	0	0.00	7	6	46.15	-	-	-
ITGB2	0	genome.wustl.edu	37	21	46311893	46311893	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	21	46311893	46311893	C	T	SNP	ITGB2	ENST00000302347	human	ensembl	69_37n	-1	known	missense	c.1243	p.V415I	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_tail,pfam_Integrin_bsu_cyt,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB2	HGNC	ENSG00000160255	37	0	0.00	26	11	29.73	-	-	-
KANK1	0	genome.wustl.edu	37	9	711061	711061	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	9	711061	711061	G	A	SNP	KANK1	ENST00000382297	human	ensembl	69_37n	+1	known	missense	c.295	p.D99N	1.000	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104	33	0	0.00	29	10	25.64	-	-	-
KBTBD13	0	genome.wustl.edu	37	15	65370332	65370332	+	Silent	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	15	65370332	65370332	C	T	SNP	KBTBD13	ENST00000432196	human	ensembl	69_37n	+1	known	silent	c.1179	p.L393	0.918	NULL	pfam_Kelch_1,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KBTBD13	HGNC	ENSG00000234438	30	0	0.00	24	11	31.43	-	-	-
KLHL36	0	genome.wustl.edu	37	16	84690686	84690686	+	Silent	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	16	84690686	84690686	C	T	SNP	KLHL36	ENST00000564996	human	ensembl	69_37n	+1	known	silent	c.273	p.G91	0.995	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL36	HGNC	ENSG00000135686	52	0	0.00	32	14	30.43	-	-	-
KLHL7	0	genome.wustl.edu	37	7	23145615	23145615	+	RNA	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	7	23145615	23145615	G	A	SNP	KLHL7	ENST00000459661	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.094	-	-	-	no_errors	KLHL7	HGNC	ENSG00000122550	35	0	0.00	40	6	13.04	-	-	-
LARP1	0	genome.wustl.edu	37	5	154169917	154169917	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	154169917	154169917	G	A	SNP	LARP1	ENST00000336314	human	ensembl	69_37n	+1	known	missense	c.238	p.A80T	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1	HGNC	ENSG00000155506	89	0	0.00	34	18	34.62	-	-	-
LIG3	0	genome.wustl.edu	37	17	33310218	33310218	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	17	33310218	33310218	G	A	SNP	LIG3	ENST00000378526	human	ensembl	69_37n	+1	known	missense	c.194	p.R65K	0.995	NULL	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_Znf_PARP,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold-like,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG3	HGNC	ENSG00000005156	41	0	0.00	32	6	15.79	-	-	-
LPHN1	0	genome.wustl.edu	37	19	14263405	14263405	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	14263405	14263405	C	G	SNP	LPHN1	ENST00000340736	human	ensembl	69_37n	-1	known	missense	c.3459	p.W1153C	1.000	pfam_GPCR_2_latrophilin_rcpt_C	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071	69	0	0.00	86	13	13.13	-	-	-
LRRC49	0	genome.wustl.edu	37	15	71302313	71302313	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	15	71302313	71302313	G	C	SNP	LRRC49	ENST00000260382	human	ensembl	69_37n	+1	known	missense	c.1575	p.Q525H	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC49	HGNC	ENSG00000137821	47	0	0.00	27	5	15.62	-	-	-
LSR	0	genome.wustl.edu	37	19	35749961	35749961	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	35749961	35749961	G	A	SNP	LSR	ENST00000361790	human	ensembl	69_37n	+1	known	missense	c.712	p.V238I	1.000	smart_Ig_sub	pfam_LISCH7,smart_Ig_sub,pfscan_Ig-like	-	no_errors	LSR	HGNC	ENSG00000105699	32	0	0.00	14	43	75.44	-	-	-
MAP4K1	0	genome.wustl.edu	37	19	39098647	39098647	+	Nonsense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	39098647	39098647	G	C	SNP	MAP4K1	ENST00000591921	human	ensembl	69_37n	-1	novel	nonsense	c.125	p.S42*	0.033	NULL	pfam_Citron,smart_Citron	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MAP4K1	HGNC	ENSG00000104814	74	0	0.00	99	16	13.91	-	-	-
MAST1	0	genome.wustl.edu	37	19	12962763	12962763	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	12962763	12962763	G	C	SNP	MAST1	ENST00000251472	human	ensembl	69_37n	+1	known	missense	c.790	p.E264Q	1.000	pfam_MA_Ser/Thr_Kinase_dom,superfamily_MAST_pre-PK_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_cat_dom	-	no_errors	MAST1	HGNC	ENSG00000105613	27	0	0.00	35	7	16.67	-	-	-
MED15	0	genome.wustl.edu	37	22	20907442	20907442	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	22	20907442	20907442	A	G	SNP	MED15	ENST00000423862	human	ensembl	69_37n	+1	novel	missense	c.121	p.I41V	1.000	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MED15	HGNC	ENSG00000099917	66	0	0.00	37	7	15.91	-	-	-
MEIS1	0	genome.wustl.edu	37	2	66798489	66798489	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	66798489	66798489	G	A	SNP	MEIS1	ENST00000407092	human	ensembl	69_37n	+1	known	missense	c.1226	p.R409H	1.000	NULL	pfam_Homeodomain,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	MEIS1	HGNC	ENSG00000143995	42	0	0.00	45	11	19.64	-	-	-
METTL1	0	genome.wustl.edu	37	12	58162854	58162854	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	12	58162854	58162854	G	A	SNP	METTL1	ENST00000548504	human	ensembl	69_37n	-1	novel	missense	c.349	p.P117S	1.000	pfam_tRNA_(Gua-N-7)_MeTrfase	pfam_tRNA_(Gua-N-7)_MeTrfase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	METTL1	HGNC	ENSG00000037897	54	0	0.00	31	7	18.42	-	-	-
MIR4313	0	genome.wustl.edu	37	15	76054333	76054333	+	RNA	SNP	A	A	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	15	76054333	76054333	A	G	SNP	MIR4313	ENST00000561777	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	MIR4313	HGNC	ENSG00000261043	10	0	0.00	1	5	83.33	-	-	-
MLC1	0	genome.wustl.edu	37	22	50500033	50500033	+	Silent	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	22	50500033	50500033	G	A	SNP	MLC1	ENST00000311597	human	ensembl	69_37n	-1	known	silent	c.1113	p.V371	0.008	NULL	NULL	-	no_errors	MLC1	HGNC	ENSG00000100427	55	0	0.00	9	31	77.50	-	-	-
MLL	0	genome.wustl.edu	37	11	118343199	118343199	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	118343199	118343199	G	A	SNP	MLL	ENST00000389506	human	ensembl	69_37n	+1	known	missense	c.1325	p.R442Q	1.000	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	MLL	HGNC	ENSG00000118058	19	0	0.00	13	6	31.58	-	-	-
MN1	0	genome.wustl.edu	37	22	28194924	28194925	+	In_Frame_Ins	INS	-	-	TGT			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	22	28194924	28194925	-	TGT	INS	MN1	ENST00000302326	human	ensembl	69_37n	-1	known	in_frame_ins	c.1608_1607	p.540in_frame_insQ	0.997:0.998	NULL	NULL	-	no_errors	MN1	HGNC	ENSG00000169184	50	0	0.00	30	7	18.92	-	-	-
MOV10L1	0	genome.wustl.edu	37	22	50591516	50591516	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	22	50591516	50591516	C	A	SNP	MOV10L1	ENST00000262794	human	ensembl	69_37n	+1	known	missense	c.2935	p.L979M	1.000	NULL	superfamily_NA-bd_OB-fold-like	-	no_errors	MOV10L1	HGNC	ENSG00000073146	94	0	0.00	53	22	29.33	-	-	-
MPHOSPH10	0	genome.wustl.edu	37	2	71371571	71371571	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	71371571	71371571	A	C	SNP	MPHOSPH10	ENST00000244230	human	ensembl	69_37n	+1	known	missense	c.1460	p.E487A	1.000	pfam_Mpp10,pirsf_snoRNP_Mpp10	pfam_Mpp10,pirsf_snoRNP_Mpp10	-	no_errors	MPHOSPH10	HGNC	ENSG00000124383	52	0	0.00	48	17	26.15	-	-	-
MYBBP1A	0	genome.wustl.edu	37	17	4452659	4452659	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	17	4452659	4452659	C	T	SNP	MYBBP1A	ENST00000573116	human	ensembl	69_37n	-1	known	missense	c.1156	p.D386N	1.000	pfam_DNA_pol_V,superfamily_ARM-type_fold	pfam_DNA_pol_V,superfamily_ARM-type_fold	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MYBBP1A	HGNC	ENSG00000132382	32	0	0.00	27	4	12.90	-	-	-
NDRG2	0	genome.wustl.edu	37	14	21486165	21486165	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	14	21486165	21486165	G	A	SNP	NDRG2	ENST00000553593	human	ensembl	69_37n	-1	putative	missense	c.677	p.S226F	1.000	pfam_Ndr	pfam_Ndr	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	NDRG2	HGNC	ENSG00000165795	68	0	0.00	49	15	23.44	-	-	-
NFATC3	0	genome.wustl.edu	37	16	68225648	68225648	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	16	68225648	68225648	A	T	SNP	NFATC3	ENST00000346183	human	ensembl	69_37n	+1	known	missense	c.3076	p.I1026F	1.000	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT_TIG_rcpt,pfscan_RHD,prints_NFAT	-	no_errors	NFATC3	HGNC	ENSG00000072736	71	0	0.00	38	11	22.45	-	-	-
NFKBIB	0	genome.wustl.edu	37	19	39395737	39395737	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	39395737	39395737	G	A	SNP	NFKBIB	ENST00000313582	human	ensembl	69_37n	+1	known	missense	c.262	p.D88N	0.998	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	NFKBIB	HGNC	ENSG00000104825	81	0	0.00	115	13	10.16	-	-	-
NLRC3	0	genome.wustl.edu	37	16	3602234	3602234	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	16	3602234	3602234	C	G	SNP	NLRC3	ENST00000448023	human	ensembl	69_37n	-1	known	missense	c.2455	p.D819H	0.997	smart_Leu-rich_rpt_RNase_inh_sub-typ	smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984	67	0	0.00	31	12	27.91	-	-	-
NOTCH3	0	genome.wustl.edu	37	19	15296369	15296369	+	Silent	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	15296369	15296369	G	C	SNP	NOTCH3	ENST00000263388	human	ensembl	69_37n	-1	known	silent	c.2073	p.L691	0.970	smart_EGF-like_Ca-bd,smart_EGF-like,pirsf_Notch,pfscan_EG-like_dom	pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_3,prints_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	44	0	0.00	52	8	13.33	-	-	-
NUMBL	0	genome.wustl.edu	37	19	41173889	41173889	+	Silent	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	41173889	41173889	C	T	SNP	NUMBL	ENST00000252891	human	ensembl	69_37n	-1	known	silent	c.1314	p.Q438	1.000	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTyr_interaction_dom,pfam_PTB,smart_PTyr_interaction_dom,pirsf_Numb/numb-like,pfscan_PTyr_interaction_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245	24	0	0.00	30	19	38.78	-	-	-
OR4S2	0	genome.wustl.edu	37	11	55419048	55419048	+	Silent	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	55419048	55419048	G	A	SNP	OR4S2	ENST00000312422	human	ensembl	69_37n	+1	known	silent	c.669	p.L223	0.044	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	116	0	0.00	74	18	19.57	-	-	-
OR51G2	0	genome.wustl.edu	37	11	4936482	4936482	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	4936482	4936482	C	T	SNP	OR51G2	ENST00000322013	human	ensembl	69_37n	-1	known	missense	c.412	p.V138I	0.649	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR51G2	HGNC	ENSG00000176893	26	0	0.00	15	10	40.00	-	-	-
OR5L1	0	genome.wustl.edu	37	11	55579451	55579451	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	55579451	55579451	G	T	SNP	OR5L1	ENST00000333973	human	ensembl	69_37n	+1	known	missense	c.509	p.R170I	0.002	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR5L1	HGNC	ENSG00000186117	99	0	0.00	48	15	23.81	-	-	-
PCDHGA4	0	genome.wustl.edu	37	5	140736344	140736344	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	140736344	140736344	G	C	SNP	PCDHGA4	ENST00000571252	human	ensembl	69_37n	+1	known	missense	c.1577	p.R526T	0.818	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA4	HGNC	ENSG00000262576	43	0	0.00	28	12	30.00	-	-	-
PDIA5	0	genome.wustl.edu	37	3	122880757	122880757	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	3	122880757	122880757	C	G	SNP	PDIA5	ENST00000316218	human	ensembl	69_37n	+1	known	missense	c.1510	p.L504V	1.000	NULL	pfam_Thioredoxin_domain,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,prints_Thioredoxin	-	no_errors	PDIA5	HGNC	ENSG00000065485	44	0	0.00	19	5	20.83	-	-	-
PLCL2	0	genome.wustl.edu	37	3	17053215	17053215	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	3	17053215	17053215	G	A	SNP	PLCL2	ENST00000418129	human	ensembl	69_37n	+1	known	missense	c.1999	p.D667N	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL2	HGNC	ENSG00000154822	53	0	0.00	35	7	16.67	-	-	-
PNPLA6	0	genome.wustl.edu	37	19	7621587	7621587	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	7621587	7621587	C	T	SNP	PNPLA6	ENST00000414982	human	ensembl	69_37n	+1	known	missense	c.3287	p.S1096L	1.000	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444	79	0	0.00	129	19	12.84	-	-	-
POLR2J3	0	genome.wustl.edu	37	7	102182031	102182031	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	7	102182031	102182031	G	A	SNP	POLR2J3	ENST00000379357	human	ensembl	69_37n	-1	known	missense	c.191	p.T64M	0.968	NULL	NULL	-	no_errors	POLR2J3	HGNC	ENSG00000168255	8	0	0.00	1	3	75.00	-	-	-
POLR3A	0	genome.wustl.edu	37	10	79745033	79745033	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	10	79745033	79745033	G	A	SNP	POLR3A	ENST00000372371	human	ensembl	69_37n	-1	known	missense	c.3137	p.T1046I	1.000	pfam_RNA_pol_Rpb1_5	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,smart_RNA_pol_N	-	no_errors	POLR3A	HGNC	ENSG00000148606	38	0	0.00	14	14	50.00	-	-	-
POU5F1	0	genome.wustl.edu	37	6	31133443	31133443	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	6	31133443	31133443	C	G	SNP	POU5F1	ENST00000259915	human	ensembl	69_37n	-1	known	missense	c.562	p.E188Q	1.000	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific,prints_POU	pfam_POU_specific,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeodomain,pfscan_Homeodomain,pfscan_POU_specific,prints_POU	-	no_errors	POU5F1	HGNC	ENSG00000204531	48	0	0.00	46	7	13.21	-	-	-
PPM1M	0	genome.wustl.edu	37	3	52282678	52282678	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	3	52282678	52282678	G	A	SNP	PPM1M	ENST00000457351	human	ensembl	69_37n	+1	known	missense	c.940	p.D314N	0.997	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1M	HGNC	ENSG00000164088	43	0	0.00	20	13	39.39	-	-	-
PRAMEF18	0	genome.wustl.edu	37	1	13474983	13474983	+	Silent	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	1	13474983	13474983	G	A	SNP	PRAMEF18	ENST00000376126	human	ensembl	69_37n	-1	known	silent	c.1146	p.F382	0.004	NULL	NULL	-	no_errors	PRAMEF18	HGNC	ENSG00000204491	149	0	0.00	94	35	27.13	-	-	-
PRDM9	0	genome.wustl.edu	37	5	23527492	23527492	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	23527492	23527492	A	T	SNP	PRDM9	ENST00000296682	human	ensembl	69_37n	+1	known	missense	c.2295	p.R765S	0.003	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256	46	0	0.00	77	10	11.49	-	-	-
PRIC285	0	genome.wustl.edu	37	20	62202569	62202569	+	RNA	SNP	A	A	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	20	62202569	62202569	A	C	SNP	PRIC285	ENST00000479540	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	RP4-697K14.7	Clone_based_vega_gene	ENSG00000130589	32	0	0.00	67	9	11.84	-	-	-
PSG6	0	genome.wustl.edu	37	19	43414865	43414865	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	43414865	43414865	C	G	SNP	PSG6	ENST00000292125	human	ensembl	69_37n	-1	known	missense	c.573	p.R191S	0.002	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	PSG6	HGNC	ENSG00000170848	157	0	0.00	190	55	22.45	-	-	-
RGS4	0	genome.wustl.edu	37	1	163042526	163042526	+	RNA	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	1	163042526	163042526	C	T	SNP	RGS4	ENST00000491263	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.028	-	-	-	no_errors	RGS4	HGNC	ENSG00000117152	56	0	0.00	45	7	13.21	-	-	-
RHOA	0	genome.wustl.edu	37	3	49449842	49449842	+	RNA	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	3	49449842	49449842	G	C	SNP	RHOA	ENST00000265538	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.284	-	-	-	no_errors	RHOA	HGNC	ENSG00000067560	34	0	0.00	21	6	22.22	-	-	-
ROBO2	0	genome.wustl.edu	37	3	77147378	77147378	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	3	77147378	77147378	T	G	SNP	ROBO2	ENST00000461745	human	ensembl	69_37n	+1	known	missense	c.275	p.F92C	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	ROBO2	HGNC	ENSG00000185008	78	0	0.00	16	16	50.00	-	-	-
RP1	0	genome.wustl.edu	37	8	55540482	55540482	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	8	55540482	55540482	C	T	SNP	RP1	ENST00000220676	human	ensembl	69_37n	+1	known	missense	c.4040	p.S1347F	0.032	NULL	pfam_Doublecortin_dom,superfamily_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237	60	0	0.00	66	10	13.16	-	-	-
RPTOR	0	genome.wustl.edu	37	17	78933918	78933918	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	17	78933918	78933918	C	-	DEL	RPTOR	ENST00000306801	human	ensembl	69_37n	+1	known	frame_shift_del	c.3518	p.C1174fs	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_HEAT,pfam_WD40_repeat,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Raptor	-	no_errors	RPTOR	HGNC	ENSG00000141564	50	0	0.00	32	31	49.21	-	-	-
RTL1	0	genome.wustl.edu	37	14	101350192	101350192	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	14	101350192	101350192	C	-	DEL	RTL1	ENST00000534062	human	ensembl	69_37n	-1	known	frame_shift_del	c.934	p.V312fs	0.931	pfam_Retrotrans_gag	pfam_Retrotrans_gag,superfamily_Peptidase_aspartic	-	no_errors	RTL1	HGNC	ENSG00000254656	37	0	0.00	11	2	15.38	-	-	-
SAA2	0	genome.wustl.edu	37	11	18269511	18269511	+	Silent	SNP	G	G	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	18269511	18269511	G	T	SNP	SAA2	ENST00000256733	human	ensembl	69_37n	-1	known	silent	c.48	p.V16	0.030	pirsf_Serum_amyloid_A	pfam_Serum_amyloid_A,smart_Serum_amyloid_A,pirsf_Serum_amyloid_A,prints_Serum_amyloid_A	-	no_errors	SAA2	HGNC	ENSG00000134339	109	0	0.00	81	9	10.00	-	-	-
SEPT2	0	genome.wustl.edu	37	2	242275429	242275429	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	242275429	242275429	T	C	SNP	SEPT2	ENST00000360051	human	ensembl	69_37n	+1	known	missense	c.257	p.V86A	0.998	pfam_Cell_div_GTP-bd,pirsf_Septin,prints_Septin2	pfam_Cell_div_GTP-bd,pirsf_Septin,prints_Septin2	-	no_errors	SEPT2	HGNC	ENSG00000168385	59	0	0.00	38	9	19.15	-	-	-
SH3BP1	0	genome.wustl.edu	37	22	38046694	38046694	+	Silent	SNP	T	T	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	22	38046694	38046694	T	G	SNP	SH3BP1	ENST00000357436	human	ensembl	69_37n	+1	known	silent	c.1560	p.A520	0.004	NULL	pfam_RhoGAP_dom,pfam_BAR_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	SH3BP1	HGNC	ENSG00000100092	76	0	0.00	10	44	81.48	-	-	-
SHISA9	0	genome.wustl.edu	37	16	13329149	13329149	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	16	13329149	13329149	G	-	DEL	SHISA9	ENST00000558583	human	ensembl	69_37n	+1	known	frame_shift_del	c.1281	p.G428fs	1.000	NULL	NULL	-	no_errors	SHISA9	HGNC	ENSG00000237515	61	0	0.00	37	12	24.49	-	-	-
SLC12A3	0	genome.wustl.edu	37	16	56936397	56936397	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	16	56936397	56936397	G	A	SNP	SLC12A3	ENST00000438926	human	ensembl	69_37n	+1	known	missense	c.2860	p.E954K	1.000	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease_dom,pfam_AA_permease_N,prints_NaCl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A3	HGNC	ENSG00000070915	27	0	0.00	9	16	64.00	-	-	-
SLC35E3	0	genome.wustl.edu	37	12	69158496	69158496	+	Silent	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	12	69158496	69158496	C	T	SNP	SLC35E3	ENST00000398004	human	ensembl	69_37n	+1	known	silent	c.768	p.F256	0.997	pfam_DUF250,pfam_DMT	pfam_DUF250,pfam_DMT	-	no_errors	SLC35E3	HGNC	ENSG00000175782	92	0	0.00	118	16	11.94	-	-	-
SMURF2	0	genome.wustl.edu	37	17	62558993	62558993	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	17	62558993	62558993	G	C	SNP	SMURF2	ENST00000262435	human	ensembl	69_37n	-1	known	missense	c.1108	p.R370G	1.000	superfamily_HECT	pfam_HECT,pfam_WW_Rsp5_WWP,pfam_C2_Ca-dep,superfamily_HECT,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_WW_Rsp5_WWP,smart_C2_Ca-dep,smart_WW_Rsp5_WWP,smart_HECT,pfscan_HECT,pfscan_C2_membr_targeting,pfscan_WW_Rsp5_WWP	-	no_errors	SMURF2	HGNC	ENSG00000108854	78	0	0.00	82	15	15.46	-	-	-
SNAI1	0	genome.wustl.edu	37	20	48604479	48604479	+	Silent	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	20	48604479	48604479	C	G	SNP	SNAI1	ENST00000244050	human	ensembl	69_37n	+1	known	silent	c.681	p.L227	0.994	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI1	HGNC	ENSG00000124216	41	0	0.00	68	12	15.00	-	-	-
SSPO	0	genome.wustl.edu	37	7	149477329	149477329	+	RNA	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	7	149477329	149477329	G	A	SNP	SSPO	ENST00000262089	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	34	0	0.00	19	16	45.71	-	-	-
STK32A	0	genome.wustl.edu	37	5	146619205	146619205	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	5	146619205	146619205	C	T	SNP	STK32A	ENST00000397936	human	ensembl	69_37n	+1	known	missense	c.8	p.A3V	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	STK32A	HGNC	ENSG00000169302	49	0	0.00	11	19	63.33	-	-	-
STX3	0	genome.wustl.edu	37	11	59554574	59554574	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	59554574	59554574	A	G	SNP	STX3	ENST00000337979	human	ensembl	69_37n	+1	known	missense	c.179	p.Y60C	1.000	pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX3	HGNC	ENSG00000166900	60	0	0.00	15	46	75.41	-	-	-
TAB3	0	genome.wustl.edu	37	X	30877660	30877660	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	X	30877660	30877660	G	C	SNP	TAB3	ENST00000288422	human	ensembl	69_37n	-1	known	missense	c.46	p.L16V	1.000	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	pfam_CUE,pfam_Znf_RanBP2,superfamily_UBA-like,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB3	HGNC	ENSG00000157625	61	0	0.00	33	8	19.51	-	-	-
TIMM44	0	genome.wustl.edu	37	19	7998980	7998980	+	Silent	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	7998980	7998980	G	A	SNP	TIMM44	ENST00000270538	human	ensembl	69_37n	-1	known	silent	c.537	p.L179	0.936	pirsf_Tim44,tigrfam_Tim44	pfam_Tim44-related/Ribosome_L45,smart_Tim44-related/Ribosome_L45,pirsf_Tim44,tigrfam_Tim44	-	no_errors	TIMM44	HGNC	ENSG00000104980	50	0	0.00	39	10	20.41	-	-	-
TMPRSS11A	0	genome.wustl.edu	37	4	68797734	68797734	+	Silent	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	4	68797734	68797734	G	A	SNP	TMPRSS11A	ENST00000334830	human	ensembl	69_37n	-1	known	silent	c.306	p.I102	1.000	pirsf_Pept_S1A_HAT/DESC1,pfam_SEA	pirsf_Pept_S1A_HAT/DESC1,pfam_Peptidase_S1_S6,pfam_SEA,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	TMPRSS11A	HGNC	ENSG00000187054	76	0	0.00	35	5	12.50	-	-	-
TMPRSS13	0	genome.wustl.edu	37	11	117780640	117780640	+	Silent	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	11	117780640	117780640	C	T	SNP	TMPRSS13	ENST00000445164	human	ensembl	69_37n	-1	known	silent	c.990	p.A330	0.006	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pirsf_Peptidase_S1A_TMPRSS13,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1_S6,pirsf_Peptidase_S1A_TMPRSS13,prints_Peptidase_S1A,pfscan_Srcr_rcpt,pfscan_Peptidase_S1_S6	-	no_errors	TMPRSS13	HGNC	ENSG00000137747	22	0	0.00	27	15	35.71	-	-	-
TRRAP	0	genome.wustl.edu	37	7	98565273	98565273	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	7	98565273	98565273	G	A	SNP	TRRAP	ENST00000456197	human	ensembl	69_37n	+1	novel	missense	c.6608	p.R2203K	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	TRRAP	HGNC	ENSG00000196367	45	0	0.00	25	13	34.21	-	-	-
TTN	0	genome.wustl.edu	37	2	179623810	179623810	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	179623810	179623810	C	T	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.10204	p.E3402K	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	60	0	0.00	39	6	13.33	-	-	-
TUBB8	0	genome.wustl.edu	37	10	93104	93104	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	10	93104	93104	C	T	SNP	TUBB8	ENST00000328974	human	ensembl	69_37n	-1	known	missense	c.1228	p.E410K	1.000	superfamily_Tub_FtsZ_C,prints_Gamma_tubulin,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_myosin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB8	HGNC	ENSG00000173876	81	0	0.00	50	34	40.48	-	-	-
USP24	0	genome.wustl.edu	37	1	55566622	55566622	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	1	55566622	55566622	C	T	SNP	USP24	ENST00000294383	human	ensembl	69_37n	-1	known	missense	c.5161	p.D1721N	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,superfamily_UBA-like,superfamily_ARM-type_fold,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19	-	no_errors	USP24	HGNC	ENSG00000162402	59	0	0.00	25	27	51.92	-	-	-
VLDLR	0	genome.wustl.edu	37	9	2650444	2650444	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	9	2650444	2650444	G	A	SNP	VLDLR	ENST00000382100	human	ensembl	69_37n	+1	known	missense	c.2179	p.D727N	1.000	superfamily_Growth_fac_rcpt,smart_EGF-like	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_Ca-bd,superfamily_LDrepeatLR_classA_rpt,superfamily_Growth_fac_rcpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	VLDLR	HGNC	ENSG00000147852	48	0	0.00	29	12	29.27	-	-	-
VPS13B	0	genome.wustl.edu	37	8	100779156	100779156	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	8	100779156	100779156	G	A	SNP	VPS13B	ENST00000358544	human	ensembl	69_37n	+1	known	missense	c.7280	p.R2427K	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549	50	0	0.00	50	6	10.71	-	-	-
VSIG1	0	genome.wustl.edu	37	X	107320311	107320311	+	Silent	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	X	107320311	107320311	C	T	SNP	VSIG1	ENST00000415430	human	ensembl	69_37n	+1	known	silent	c.972	p.S324	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	VSIG1	HGNC	ENSG00000101842	43	0	0.00	6	15	71.43	-	-	-
YAF2	0	genome.wustl.edu	37	12	42629602	42629602	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	12	42629602	42629602	G	T	SNP	YAF2	ENST00000555248	human	ensembl	69_37n	-1	known	missense	c.350	p.A117D	0.992	NULL	pfam_Znf_RanBP2,pfam_Uncharacterised_FAM123,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	YAF2	HGNC	ENSG00000015153	63	0	0.00	18	33	64.71	-	-	-
ZIC1	0	genome.wustl.edu	37	3	147128862	147128862	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	3	147128862	147128862	C	G	SNP	ZIC1	ENST00000282928	human	ensembl	69_37n	+1	known	missense	c.963	p.I321M	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC1	HGNC	ENSG00000152977	40	0	0.00	18	14	43.75	-	-	-
ZNF142	0	genome.wustl.edu	37	2	219507867	219507867	+	Silent	SNP	G	G	A			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	2	219507867	219507867	G	A	SNP	ZNF142	ENST00000411696	human	ensembl	69_37n	-1	known	silent	c.3372	p.I1124	0.306	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568	66	0	0.00	83	15	15.31	-	-	-
ZNF146	0	genome.wustl.edu	37	19	36727858	36727858	+	Silent	SNP	A	A	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	36727858	36727858	A	T	SNP	ZNF146	ENST00000443387	human	ensembl	69_37n	+1	known	silent	c.516	p.I172	0.955	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF146	HGNC	ENSG00000167635	40	0	0.00	29	7	18.42	-	-	-
ZNF527	0	genome.wustl.edu	37	19	37880273	37880273	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	19	37880273	37880273	C	T	SNP	ZNF527	ENST00000436120	human	ensembl	69_37n	+1	known	missense	c.1322	p.P441L	0.998	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF527	HGNC	ENSG00000189164	29	0	0.00	46	18	28.12	-	-	-
ZNF679	0	genome.wustl.edu	37	7	63727200	63727200	+	Frame_Shift_Del	DEL	A	A	-			TCGA-E2-A574-01A-11D-A29N-09	TCGA-E2-A574-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	2afd1023-472c-4d73-a303-980c4e755a5d	dfbfaff6-e80b-4c47-8539-5ef2723f6ed9	7	63727200	63727200	A	-	DEL	ZNF679	ENST00000255746	human	ensembl	69_37n	+1	known	frame_shift_del	c.1189	p.N397fs	0.139	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF679	HGNC	ENSG00000197123	48	0	0.00	15	2	11.76	-	-	-
