Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA13	0	genome.wustl.edu	37	7	48314170	48314170	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	48314170	48314170	G	C	SNP	ABCA13	ENST00000435803	human	ensembl	69_37n	+1	known	missense	c.4907	p.R1636T	0.341	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	55	0	0.00	27	36	57.14	-	-	-
ACACB	0	genome.wustl.edu	37	12	109654462	109654462	+	Silent	SNP	G	G	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	12	109654462	109654462	G	T	SNP	ACACB	ENST00000338432	human	ensembl	69_37n	+1	known	silent	c.3390	p.V1130	0.985	pfam_AcCoA_COase_cen	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_fold,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555	66	0	0.00	24	4	14.29	-	-	-
ACAD11	0	genome.wustl.edu	37	3	132277850	132277850	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	132277850	132277850	G	A	SNP	ACAD11	ENST00000264990	human	ensembl	69_37n	-1	known	missense	c.2308	p.R770W	0.037	superfamily_AcylCo_DH/oxidase_C	pfam_Aminoglycoside_PTrfase,pfam_Acyl-CoA_Oxase/DH_1,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,pfam_Acyl-CoA_DH_N,superfamily_AcylCoA_DH/oxidase,superfamily_AcylCo_DH/oxidase_C,superfamily_Kinase-like_dom	-	no_errors	ACAD11	HGNC	ENSG00000240303	39	0	0.00	11	6	35.29	-	-	-
ANK2	0	genome.wustl.edu	37	4	114203939	114203939	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	114203939	114203939	A	C	SNP	ANK2	ENST00000357077	human	ensembl	69_37n	+1	known	missense	c.1990	p.T664P	0.363	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362	38	0	0.00	28	17	37.78	-	-	-
ARRDC3	0	genome.wustl.edu	37	5	90670780	90670780	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	90670780	90670780	T	C	SNP	ARRDC3	ENST00000265138	human	ensembl	69_37n	-1	known	missense	c.829	p.I277V	1.000	pfam_Arrestin_C-like,superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set	-	no_errors	ARRDC3	HGNC	ENSG00000113369	38	0	0.00	29	14	32.56	-	-	-
BTF3L4	0	genome.wustl.edu	37	1	52530570	52530571	+	Frame_Shift_Ins	INS	-	-	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	52530570	52530571	-	A	INS	BTF3L4	ENST00000313334	human	ensembl	69_37n	+1	known	frame_shift_ins	c.128_129	p.L46fs	0.999:0.252	pfam_Nas_poly-pep-assoc_cplx,pfscan_Nas_poly-pep-assoc_cplx	pfam_Nas_poly-pep-assoc_cplx,pfscan_Nas_poly-pep-assoc_cplx	-	no_errors	BTF3L4	HGNC	ENSG00000134717	75	0	0.00	35	9	20.45	-	-	-
C7orf26	0	genome.wustl.edu	37	7	6634119	6634119	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	6634119	6634119	C	A	SNP	C7orf26	ENST00000344417	human	ensembl	69_37n	+1	known	nonsense	c.468	p.Y156*	1.000	NULL	NULL	-	no_errors	C7orf26	HGNC	ENSG00000146576	69	0	0.00	51	21	29.17	-	-	-
CARM1	0	genome.wustl.edu	37	19	11027383	11027383	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	19	11027383	11027383	C	T	SNP	CARM1	ENST00000327064	human	ensembl	69_37n	+1	known	missense	c.950	p.S317F	1.000	pfam_Arg_MeTrfase	pfam_Histone-Arg_MeTrfase_N,pfam_Arg_MeTrfase,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom,pfam_tRNA_mo5U34_MeTrfase,pfam_Methyltransf_11	-	no_errors	CARM1	HGNC	ENSG00000142453	30	0	0.00	31	13	29.55	-	-	-
CCDC73	0	genome.wustl.edu	37	11	32675581	32675581	+	Missense_Mutation	SNP	T	T	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	11	32675581	32675581	T	G	SNP	CCDC73	ENST00000335185	human	ensembl	69_37n	-1	known	missense	c.777	p.E259D	0.987	NULL	NULL	-	no_errors	CCDC73	HGNC	ENSG00000186714	68	0	0.00	32	12	27.27	-	-	-
CKMT2	0	genome.wustl.edu	37	5	80553653	80553653	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	80553653	80553653	G	A	SNP	CKMT2	ENST00000254035	human	ensembl	69_37n	+1	known	missense	c.857	p.R286Q	1.000	pfam_ATP-guanido_PTrfase_cat	pfam_ATP-guanido_PTrfase_cat,pfam_ATP-guanido_PTrfase_N,superfamily_ATP-guanido_PTrfase_N	-	no_errors	CKMT2	HGNC	ENSG00000131730	48	0	0.00	32	10	23.81	-	-	-
DHX30	0	genome.wustl.edu	37	3	47882665	47882665	+	Nonsense_Mutation	SNP	C	C	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	47882665	47882665	C	G	SNP	DHX30	ENST00000445061	human	ensembl	69_37n	+1	known	nonsense	c.665	p.S222*	0.972	NULL	pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX30	HGNC	ENSG00000132153	39	0	0.00	23	6	20.69	-	-	-
FSTL5	0	genome.wustl.edu	37	4	162680584	162680584	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	162680584	162680584	C	T	SNP	FSTL5	ENST00000306100	human	ensembl	69_37n	-1	known	missense	c.706	p.E236K	1.000	NULL	pfam_Ig_I-set,pfam_Kazal-type_dom,pfam_Ig_V-set,pfam_Prot_inh_Kazal,smart_Prot_inh_Kazal,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_HAND_2,pfscan_Ig-like	-	no_errors	FSTL5	HGNC	ENSG00000168843	52	0	0.00	28	5	15.15	-	-	-
GANAB	0	genome.wustl.edu	37	11	62394094	62394094	+	Silent	SNP	T	T	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	11	62394094	62394094	T	G	SNP	GANAB	ENST00000346178	human	ensembl	69_37n	-1	known	silent	c.2526	p.S842	0.969	NULL	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd	-	no_errors	GANAB	HGNC	ENSG00000089597	28	0	0.00	10	23	69.70	-	-	-
GPAT2	0	genome.wustl.edu	37	2	96688929	96688929	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	2	96688929	96688929	G	A	SNP	GPAT2	ENST00000359548	human	ensembl	69_37n	-1	known	missense	c.2074	p.R692C	1.000	NULL	smart_Acyltransferase	-	no_errors	GPAT2	HGNC	ENSG00000186281	24	0	0.00	15	4	21.05	-	-	-
H2AFY2	0	genome.wustl.edu	37	10	71835425	71835425	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	10	71835425	71835425	G	A	SNP	H2AFY2	ENST00000373255	human	ensembl	69_37n	+1	known	missense	c.11	p.R4Q	1.000	smart_Histone_H2A,pirsf_Core_histone_macro-H2A	pfam_A1pp,pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,smart_A1pp,pirsf_Core_histone_macro-H2A,pfscan_A1pp,prints_Histone_H2A	-	no_errors	H2AFY2	HGNC	ENSG00000099284	63	0	0.00	30	11	26.19	-	-	-
KIAA1551	0	genome.wustl.edu	37	12	32137328	32137328	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	12	32137328	32137328	T	C	SNP	KIAA1551	ENST00000312561	human	ensembl	69_37n	+1	known	missense	c.3439	p.C1147R	0.000	NULL	NULL	-	no_errors	KIAA1551	HGNC	ENSG00000174718	64	0	0.00	34	28	45.16	-	-	-
LAMB2	0	genome.wustl.edu	37	3	49163267	49163267	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	49163267	49163267	G	A	SNP	LAMB2	ENST00000305544	human	ensembl	69_37n	-1	known	nonsense	c.2401	p.Q801*	1.000	pfam_EGF_laminin,smart_EGF-like,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037	41	0	0.00	19	10	34.48	-	-	-
LAMB4	0	genome.wustl.edu	37	7	107684275	107684275	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	107684275	107684275	C	G	SNP	LAMB4	ENST00000205386	human	ensembl	69_37n	-1	known	missense	c.4393	p.G1465R	0.000	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	104	1	0.94	69	18	20.69	-	-	-
MAB21L3	0	genome.wustl.edu	37	1	116663694	116663694	+	Splice_Site	SNP	G	G	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	116663694	116663694	G	T	SNP	MAB21L3	ENST00000369500	human	ensembl	69_37n	+1	known	splice_site	c.189+1	e2+1	1.000	-	-	-	no_errors	MAB21L3	HGNC	ENSG00000173212	47	0	0.00	22	4	15.38	-	-	-
MAT2A	0	genome.wustl.edu	37	2	85769862	85769862	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	2	85769862	85769862	C	G	SNP	MAT2A	ENST00000306434	human	ensembl	69_37n	+1	known	missense	c.943	p.L315V	1.000	pfam_S-AdoMet_synt_C,superfamily_S-AdoMet_synthetase_sfam,pirsf_S-AdoMet_synthetase,tigrfam_S-AdoMet_synthetase	pfam_S-AdoMet_synt_C,pfam_S-AdoMet_synt_central,pfam_S-AdoMet_synt_N,superfamily_S-AdoMet_synthetase_sfam,pirsf_S-AdoMet_synthetase,tigrfam_S-AdoMet_synthetase	-	no_errors	MAT2A	HGNC	ENSG00000168906	70	0	0.00	38	66	63.46	-	-	-
MFSD8	0	genome.wustl.edu	37	4	128886286	128886286	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	128886286	128886286	C	T	SNP	MFSD8	ENST00000296468	human	ensembl	69_37n	-1	known	missense	c.3	p.M1I	0.738	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD8	HGNC	ENSG00000164073	20	0	0.00	5	6	54.55	-	-	-
MID1	0	genome.wustl.edu	37	X	10491176	10491176	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	X	10491176	10491176	C	G	SNP	MID1	ENST00000317552	human	ensembl	69_37n	-1	known	missense	c.712	p.E238Q	1.000	smart_Bbox_C	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	MID1	HGNC	ENSG00000101871	88	0	0.00	40	18	31.03	-	-	-
MINPP1	0	genome.wustl.edu	37	10	89268241	89268241	+	Missense_Mutation	SNP	A	A	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	10	89268241	89268241	A	T	SNP	MINPP1	ENST00000371996	human	ensembl	69_37n	+1	known	missense	c.786	p.L262F	0.876	pfam_His_Pase_superF_clade-2,pirsf_Histidine_acid_Pase_euk	pfam_His_Pase_superF_clade-2,pirsf_Histidine_acid_Pase_euk	-	no_errors	MINPP1	HGNC	ENSG00000107789	29	0	0.00	29	9	23.68	-	-	-
ODZ2	0	genome.wustl.edu	37	5	167645851	167645851	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	167645851	167645851	C	A	SNP	ODZ2	ENST00000518659	human	ensembl	69_37n	+1	known	missense	c.4955	p.P1652H	1.000	superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl,superfamily_Cytokine_IL1-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ2	HGNC	ENSG00000145934	22	0	0.00	11	5	31.25	-	-	-
OSGEPL1	0	genome.wustl.edu	37	2	190620045	190620045	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	2	190620045	190620045	T	C	SNP	OSGEPL1	ENST00000264151	human	ensembl	69_37n	-1	known	missense	c.463	p.I155V	0.998	pfam_Peptidase_M22,tigrfam_Peptidase_M22_subgr	pfam_Peptidase_M22,prints_Peptidase_M22_subgr,tigrfam_Peptidase_M22_subgr	-	no_errors	OSGEPL1	HGNC	ENSG00000128694	47	0	0.00	37	13	26.00	-	-	-
PCDHA2	0	genome.wustl.edu	37	5	140174750	140174750	+	Silent	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	140174750	140174750	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	69_37n	+1	known	silent	c.201	p.A67	0.493	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969	30	0	0.00	24	10	29.41	-	-	-
PCDHGA1	0	genome.wustl.edu	37	5	140711823	140711823	+	Silent	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	5	140711823	140711823	G	A	SNP	PCDHGA1	ENST00000517417	human	ensembl	69_37n	+1	known	silent	c.1572	p.Q524	0.914	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956	41	0	0.00	27	8	22.86	-	-	-
PCID2	0	genome.wustl.edu	37	13	113838712	113838712	+	Silent	SNP	T	T	C			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	13	113838712	113838712	T	C	SNP	PCID2	ENST00000246505	human	ensembl	69_37n	-1	known	silent	c.795	p.T265	0.012	smart_PAM	pfam_PCI_dom,smart_PAM	-	no_errors	PCID2	HGNC	ENSG00000126226	97	0	0.00	11	37	77.08	-	-	-
PRKCSH	0	genome.wustl.edu	37	19	11558370	11558370	+	Silent	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	19	11558370	11558370	G	A	SNP	PRKCSH	ENST00000252455	human	ensembl	69_37n	+1	known	silent	c.966	p.E322	0.000	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_LDrepeatLR_classA_rpt,pfscan_EF_HAND_2	-	no_errors	PRKCSH	HGNC	ENSG00000130175	15	0	0.00	24	8	25.00	-	-	-
PTCHD2	0	genome.wustl.edu	37	1	11594443	11594443	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	11594443	11594443	G	A	SNP	PTCHD2	ENST00000304391	human	ensembl	69_37n	+1	putative	missense	c.40	p.V14I	0.997	NULL	NULL	-	no_errors	PTCHD2	HGNC	ENSG00000204624	40	0	0.00	14	5	26.32	-	-	-
RNF168	0	genome.wustl.edu	37	3	196199594	196199594	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	196199594	196199594	A	G	SNP	RNF168	ENST00000318037	human	ensembl	69_37n	-1	known	missense	c.812	p.I271T	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF168	HGNC	ENSG00000163961	35	0	0.00	17	5	22.73	-	-	-
SUPT16H	0	genome.wustl.edu	37	14	21834653	21834653	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	14	21834653	21834653	C	A	SNP	SUPT16H	ENST00000216297	human	ensembl	69_37n	-1	known	missense	c.991	p.D331Y	1.000	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain	pfam_FACT_Spt16p,pfam_Pept_M24_structural-domain,pfam_DUF1747,superfamily_Pept_M24_structural-domain	-	no_errors	SUPT16H	HGNC	ENSG00000092201	66	0	0.00	44	11	20.00	-	-	-
SUV420H1	0	genome.wustl.edu	37	11	67925891	67925891	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	11	67925891	67925891	G	A	SNP	SUV420H1	ENST00000304363	human	ensembl	69_37n	-1	known	missense	c.1922	p.A641V	0.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SUV420H1	HGNC	ENSG00000110066	65	0	0.00	39	17	30.36	-	-	-
TCP10	0	genome.wustl.edu	37	6	167790110	167790110	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	6	167790110	167790110	C	T	SNP	TCP10	ENST00000397829	human	ensembl	69_37n	-1	known	missense	c.500	p.R167H	0.001	NULL	NULL	-	no_errors	TCP10	HGNC	ENSG00000203690	28	0	0.00	13	4	23.53	-	-	-
TRBV5-1	0	genome.wustl.edu	37	7	142021186	142021186	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	7	142021186	142021186	C	G	SNP	TRBV5-1	ENST00000390381	human	ensembl	69_37n	+1	known	missense	c.166	p.Q56E	0.414	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon:bad_bp_length_for_coding_region	TRBV5-1	HGNC	ENSG00000211734	57	0	0.00	33	14	29.79	-	-	-
TSEN2	0	genome.wustl.edu	37	3	12531481	12531481	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	3	12531481	12531481	A	G	SNP	TSEN2	ENST00000284995	human	ensembl	69_37n	+1	known	missense	c.182	p.Y61C	0.975	pirsf_tRNA_splic_SEN2	pfam_tRNA_intron_Endonuc_cat-like,pfam_tRNA_intron_Endonuc_N,superfamily_tRNA_intron_Endonuc_cat-like,pirsf_tRNA_splic_SEN2	-	no_errors	TSEN2	HGNC	ENSG00000154743	31	0	0.00	22	8	26.67	-	-	-
VPS13D	0	genome.wustl.edu	37	1	12378344	12378344	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	1	12378344	12378344	C	T	SNP	VPS13D	ENST00000358136	human	ensembl	69_37n	+1	known	missense	c.7364	p.S2455F	1.000	NULL	pfam_VPSAP,pfam_UBA/transl_elong_EF1B_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	46	0	0.00	30	17	36.17	-	-	-
ZNF330	0	genome.wustl.edu	37	4	142150852	142150852	+	Splice_Site	SNP	G	G	T			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	4	142150852	142150852	G	T	SNP	ZNF330	ENST00000262990	human	ensembl	69_37n	+1	known	splice_site	c.418+1	e5+1	1.000	-	-	-	no_errors	ZNF330	HGNC	ENSG00000109445	61	0	0.00	35	10	22.22	-	-	-
ZNF671	0	genome.wustl.edu	37	19	58232276	58232276	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A1RG-01A-11D-A14G-09	TCGA-E9-A1RG-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	81896525-0e3f-47ff-9b0d-95b45aef718c	6db47e2e-f864-4b04-8a81-45bf16681178	19	58232276	58232276	C	G	SNP	ZNF671	ENST00000317398	human	ensembl	69_37n	-1	known	missense	c.1178	p.G393A	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF671	HGNC	ENSG00000083814	30	0	0.00	22	20	47.62	-	-	-
