Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC3	0	genome.wustl.edu	37	17	48755286	48755286	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	17	48755286	48755286	C	G	SNP	ABCC3	ENST00000285238	human	ensembl	69_37n	+1	known	missense	c.3560	p.P1187R	0.999	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC3	HGNC	ENSG00000108846	30	0	0.00	27	6	18.18	-	-	-
ABCC9	0	genome.wustl.edu	37	12	22086768	22086768	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	12	22086768	22086768	C	T	SNP	ABCC9	ENST00000261200	human	ensembl	69_37n	-1	known	missense	c.232	p.A78T	0.993	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCC9	HGNC	ENSG00000069431	61	0	0.00	44	29	39.73	-	-	-
ANK2	0	genome.wustl.edu	37	4	114257194	114257194	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	4	114257194	114257194	G	A	SNP	ANK2	ENST00000357077	human	ensembl	69_37n	+1	known	missense	c.3572	p.R1191Q	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362	17	0	0.00	24	5	17.24	-	-	-
ANKRD30B	0	genome.wustl.edu	37	18	14803745	14803745	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	18	14803745	14803745	A	G	SNP	ANKRD30B	ENST00000358984	human	ensembl	69_37n	+1	known	missense	c.2206	p.T736A	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	50	0	0.00	32	4	11.11	-	-	-
BCL9	0	genome.wustl.edu	37	1	147091300	147091300	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	1	147091300	147091300	C	T	SNP	BCL9	ENST00000234739	human	ensembl	69_37n	+1	known	missense	c.1339	p.P447S	0.977	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128	12	0	0.00	5	12	70.59	-	-	-
C11orf70	0	genome.wustl.edu	37	11	101951992	101951992	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	11	101951992	101951992	G	A	SNP	C11orf70	ENST00000434758	human	ensembl	69_37n	+1	known	missense	c.655	p.V219I	0.941	NULL	NULL	-	no_errors	C11orf70	HGNC	ENSG00000137691	69	0	0.00	11	16	59.26	-	-	-
CACTIN	0	genome.wustl.edu	37	19	3619155	3619155	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	19	3619155	3619155	C	T	SNP	CACTIN	ENST00000221899	human	ensembl	69_37n	-1	known	missense	c.766	p.V256M	1.000	pfam_Cactin_dom	pfam_Cactin_dom,pfam_Cactin_C	-	no_errors	CACTIN	HGNC	ENSG00000105298	28	0	0.00	13	6	31.58	-	-	-
CMYA5	0	genome.wustl.edu	37	5	79035212	79035212	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	5	79035212	79035212	A	G	SNP	CMYA5	ENST00000446378	human	ensembl	69_37n	+1	known	missense	c.10624	p.I3542V	1.000	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	33	0	0.00	15	9	37.50	-	-	-
CSMD1	0	genome.wustl.edu	37	8	3081256	3081256	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	8	3081256	3081256	G	T	SNP	CSMD1	ENST00000520002	human	ensembl	69_37n	-1	known	missense	c.4482	p.F1494L	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	24	0	0.00	20	7	25.93	-	-	-
ELN	0	genome.wustl.edu	37	7	73474894	73474894	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	7	73474894	73474894	T	C	SNP	ELN	ENST00000358929	human	ensembl	69_37n	+1	known	missense	c.1915	p.S639P	0.000	NULL	prints_Tropoelastin	-	no_errors	ELN	HGNC	ENSG00000049540	51	0	0.00	43	40	48.19	-	-	-
ERI2	0	genome.wustl.edu	37	16	20802184	20802184	+	Missense_Mutation	SNP	T	T	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	16	20802184	20802184	T	G	SNP	ERI2	ENST00000300005	human	ensembl	69_37n	-1	known	missense	c.803	p.Q268P	0.018	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	ERI2	HGNC	ENSG00000196678	34	0	0.00	45	8	15.09	-	-	-
FAT4	0	genome.wustl.edu	37	4	126372690	126372690	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	4	126372690	126372690	G	A	SNP	FAT4	ENST00000394329	human	ensembl	69_37n	+1	known	missense	c.10519	p.G3507R	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	45	0	0.00	37	7	15.91	-	-	-
FREM2	0	genome.wustl.edu	37	13	39261493	39261493	+	Silent	SNP	C	C	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	13	39261493	39261493	C	G	SNP	FREM2	ENST00000280481	human	ensembl	69_37n	+1	known	silent	c.12	p.A4	0.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	15	0	0.00	7	7	50.00	-	-	-
FRMPD2	0	genome.wustl.edu	37	10	49448466	49448466	+	Silent	SNP	G	G	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	10	49448466	49448466	G	A	SNP	FRMPD2	ENST00000374201	human	ensembl	69_37n	-1	known	silent	c.637	p.L213	0.998	NULL	pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_PDZ,superfamily_FERM_central,superfamily_Kinase-like_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,pfscan_FERM_domain,pfscan_PDZ,prints_Band_41_fam	-	no_errors	FRMPD2	HGNC	ENSG00000170324	20	0	0.00	26	6	18.75	-	-	-
HIST1H3F	0	genome.wustl.edu	37	6	26250661	26250661	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	6	26250661	26250661	G	A	SNP	HIST1H3F	ENST00000446824	human	ensembl	69_37n	-1	known	missense	c.173	p.S58L	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3F	HGNC	ENSG00000256316	44	0	0.00	29	10	25.64	-	-	-
INSM2	0	genome.wustl.edu	37	14	36005145	36005145	+	Silent	SNP	C	C	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	14	36005145	36005145	C	A	SNP	INSM2	ENST00000307169	human	ensembl	69_37n	+1	known	silent	c.1687	p.R563	0.992	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	INSM2	HGNC	ENSG00000168348	12	0	0.00	6	7	53.85	-	-	-
KCNS1	0	genome.wustl.edu	37	20	43723698	43723698	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	20	43723698	43723698	C	T	SNP	KCNS1	ENST00000306117	human	ensembl	69_37n	-1	known	missense	c.1394	p.R465Q	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNS1	HGNC	ENSG00000124134	35	0	0.00	25	5	16.67	-	-	-
KRTAP4-6	0	genome.wustl.edu	37	17	39296499	39296499	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	17	39296499	39296499	G	A	SNP	KRTAP4-6	ENST00000345847	human	ensembl	69_37n	-1	known	missense	c.241	p.R81C	0.992	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-6	HGNC	ENSG00000198090	33	0	0.00	32	5	13.51	-	-	-
OR5M8	0	genome.wustl.edu	37	11	56258125	56258125	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	11	56258125	56258125	C	A	SNP	OR5M8	ENST00000327216	human	ensembl	69_37n	-1	known	missense	c.722	p.G241V	0.094	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5M8	HGNC	ENSG00000181371	29	0	0.00	21	4	16.00	-	-	-
PCDHGC4	0	genome.wustl.edu	37	5	140866811	140866811	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	5	140866811	140866811	C	G	SNP	PCDHGC4	ENST00000306593	human	ensembl	69_37n	+1	known	missense	c.2071	p.L691V	0.980	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC4	HGNC	ENSG00000242419	54	0	0.00	42	10	19.23	-	-	-
POF1B	0	genome.wustl.edu	37	X	84634256	84634256	+	Silent	SNP	G	G	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	X	84634256	84634256	G	T	SNP	POF1B	ENST00000373145	human	ensembl	69_37n	-1	known	silent	c.204	p.P68	0.931	NULL	NULL	-	no_errors	POF1B	HGNC	ENSG00000124429	47	0	0.00	19	11	36.67	-	-	-
POLE	0	genome.wustl.edu	37	12	133250274	133250274	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	12	133250274	133250274	A	G	SNP	POLE	ENST00000455752	human	ensembl	69_37n	-1	known	missense	c.1279	p.Y427H	1.000	pfam_DNA-dir_DNA_pol_B_exonuc,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	33	0	0.00	19	9	32.14	-	-	-
PPARGC1A	0	genome.wustl.edu	37	4	23815386	23815386	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	4	23815386	23815386	G	A	SNP	PPARGC1A	ENST00000264867	human	ensembl	69_37n	-1	known	nonsense	c.1720	p.R574*	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPARGC1A	HGNC	ENSG00000109819	43	0	0.00	42	7	14.29	-	-	-
PPFIA3	0	genome.wustl.edu	37	19	49632226	49632226	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	19	49632226	49632226	C	T	SNP	PPFIA3	ENST00000334186	human	ensembl	69_37n	+1	known	missense	c.464	p.A155V	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA3	HGNC	ENSG00000177380	29	0	0.00	17	8	32.00	-	-	-
RAB18	0	genome.wustl.edu	37	10	27798830	27798830	+	Nonsense_Mutation	SNP	C	C	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	10	27798830	27798830	C	G	SNP	RAB18	ENST00000423465	human	ensembl	69_37n	+1	known	nonsense	c.345	p.Y115*	1.000	pfam_Small_GTPase,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Small_GTPase_Ras,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_MIRO-like,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Small_GTPase_Ras,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_start_codon:pseudogene	RAB18	HGNC	ENSG00000099246	71	0	0.00	64	14	17.95	-	-	-
RTTN	0	genome.wustl.edu	37	18	67684825	67684825	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	18	67684825	67684825	T	C	SNP	RTTN	ENST00000255674	human	ensembl	69_37n	-1	known	missense	c.6239	p.K2080R	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225	57	0	0.00	48	17	25.76	-	-	-
SLC29A3	0	genome.wustl.edu	37	10	73111493	73111496	+	Frame_Shift_Del	DEL	CTAC	CTAC	-			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	CTAC	CTAC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	10	73111493	73111496	CTAC	-	DEL	SLC29A3	ENST00000373189	human	ensembl	69_37n	+1	known	frame_shift_del	c.558_561	p.I186fs	0.993:0.988:0.391:0.033	pfam_Eqnu_transpt,prints_Eqnu_transpt	pfam_Eqnu_transpt,prints_Eqnu_transpt	-	no_errors	SLC29A3	HGNC	ENSG00000198246	22	0	0.00	14	12	46.15	-	-	-
SYTL4	0	genome.wustl.edu	37	X	99942108	99942108	+	Silent	SNP	G	G	A			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	X	99942108	99942108	G	A	SNP	SYTL4	ENST00000454200	human	ensembl	69_37n	-1	known	silent	c.1146	p.C382	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting,prints_Synaptotagmin	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_Rab-bd_domain,prints_Synaptotagmin	-	no_errors	SYTL4	HGNC	ENSG00000102362	38	0	0.00	13	6	31.58	-	-	-
TTN	0	genome.wustl.edu	37	2	179611371	179611371	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	2	179611371	179611371	C	G	SNP	TTN	ENST00000360870	human	ensembl	69_37n	-1	known	missense	c.15756	p.E5252D	0.993	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	72	0	0.00	39	13	25.00	-	-	-
USH2A	0	genome.wustl.edu	37	1	216591941	216591941	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	1	216591941	216591941	C	T	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.566	p.R189H	1.000	superfamily_ConA-like_lec_gl,smart_LamG-like	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	65	0	0.00	52	14	21.21	-	-	-
WDR52	0	genome.wustl.edu	37	3	113049172	113049172	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	3	113049172	113049172	C	T	SNP	WDR52	ENST00000393845	human	ensembl	69_37n	-1	known	missense	c.3959	p.R1320H	0.019	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530	62	0	0.00	8	32	80.00	-	-	-
WHSC1L1	0	genome.wustl.edu	37	8	38173482	38173482	+	Nonsense_Mutation	SNP	G	G	C			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	8	38173482	38173482	G	C	SNP	WHSC1L1	ENST00000317025	human	ensembl	69_37n	-1	known	nonsense	c.1934	p.S645*	1.000	NULL	pfam_PWWP,pfam_SET_dom,superfamily_Znf_FYVE_PHD,smart_PWWP,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	WHSC1L1	HGNC	ENSG00000147548	57	0	0.00	35	49	58.33	-	-	-
ZBTB48	0	genome.wustl.edu	37	1	6640763	6640763	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	1	6640763	6640763	G	T	SNP	ZBTB48	ENST00000377674	human	ensembl	69_37n	+1	known	missense	c.94	p.V32L	0.993	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB48	HGNC	ENSG00000204859	33	0	0.00	14	6	30.00	-	-	-
ZNF69	0	genome.wustl.edu	37	19	12016108	12016108	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A247-01A-11D-A167-09	TCGA-E9-A247-10A-01D-A167-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7c184a2b-d857-444a-936c-43e38a196df9	9a71e51e-6adf-4b93-b968-3849fcc81504	19	12016108	12016108	C	T	SNP	ZNF69	ENST00000429654	human	ensembl	69_37n	+1	known	missense	c.896	p.T299M	0.992	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC	ENSG00000198429	65	0	0.00	35	15	30.00	-	-	-
