Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AFF2	0	genome.wustl.edu	37	X	147743964	147743964	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	X	147743964	147743964	C	T	SNP	AFF2	ENST00000370460	human	ensembl	69_37n	+1	known	missense	c.716	p.P239L	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966	56	0	0.00	21	15	41.67	-	-	-
AKAP3	0	genome.wustl.edu	37	12	4737717	4737717	+	Silent	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	12	4737717	4737717	G	A	SNP	AKAP3	ENST00000228850	human	ensembl	69_37n	-1	known	silent	c.351	p.N117	0.000	smart_AKAP_110	pfam_AKAP_110_C,pfam_RII_binding_1,smart_AKAP_110	-	no_errors	AKAP3	HGNC	ENSG00000111254	79	0	0.00	31	14	31.11	-	-	-
ARHGAP42	0	genome.wustl.edu	37	11	100812591	100812591	+	Silent	SNP	A	A	G			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	11	100812591	100812591	A	G	SNP	ARHGAP42	ENST00000298815	human	ensembl	69_37n	+1	known	silent	c.909	p.S303	0.989	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP42	HGNC	ENSG00000165895	115	0	0.00	23	9	28.12	-	-	-
ARHGEF12	0	genome.wustl.edu	37	11	120317216	120317216	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	11	120317216	120317216	C	T	SNP	ARHGEF12	ENST00000356641	human	ensembl	69_37n	+1	known	missense	c.1393	p.R465W	1.000	pfam_Regulat_G_prot_signal-like,superfamily_Regulat_G_prot_signal_superfam	pfam_Regulat_G_prot_signal-like,pfam_DH-domain,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_DH-domain,superfamily_PDZ,smart_PDZ,smart_DH-domain,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF12	HGNC	ENSG00000196914	80	0	0.00	20	7	25.93	-	-	-
BPIFB4	0	genome.wustl.edu	37	20	31692615	31692615	+	Splice_Site	SNP	G	G	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	20	31692615	31692615	G	T	SNP	BPIFB4	ENST00000375483	human	ensembl	69_37n	+1	known	splice_site	c.1681-1	e14-1	0.993	-	-	-	no_errors	BPIFB4	HGNC	ENSG00000186191	116	0	0.00	37	12	24.49	-	-	-
C12orf5	0	genome.wustl.edu	37	12	4458991	4458991	+	Missense_Mutation	SNP	C	C	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	12	4458991	4458991	C	A	SNP	C12orf5	ENST00000179259	human	ensembl	69_37n	+1	known	missense	c.199	p.H67N	0.000	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1	-	no_errors	C12orf5	HGNC	ENSG00000078237	56	0	0.00	29	8	21.62	-	-	-
C5orf42	0	genome.wustl.edu	37	5	37187668	37187668	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	5	37187668	37187668	C	T	SNP	C5orf42	ENST00000425232	human	ensembl	69_37n	-1	known	missense	c.3928	p.E1310K	0.048	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603	77	0	0.00	23	7	22.58	-	-	-
CDH17	0	genome.wustl.edu	37	8	95183115	95183115	+	Silent	SNP	C	C	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	8	95183115	95183115	C	A	SNP	CDH17	ENST00000027335	human	ensembl	69_37n	-1	known	silent	c.882	p.V294	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH17	HGNC	ENSG00000079112	132	0	0.00	49	25	33.78	-	-	-
CHD8	0	genome.wustl.edu	37	14	21869629	21869629	+	Missense_Mutation	SNP	T	T	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	14	21869629	21869629	T	A	SNP	CHD8	ENST00000399982	human	ensembl	69_37n	-1	known	missense	c.4106	p.D1369V	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888	75	0	0.00	25	7	21.88	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16944953	16944953	+	RNA	SNP	T	T	G			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	1	16944953	16944953	T	G	SNP	CROCCP2	ENST00000412962	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	9	0	0.00	11	4	26.67	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16945027	16945027	+	RNA	SNP	T	T	C			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	1	16945027	16945027	T	C	SNP	CROCCP2	ENST00000412962	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	9	0	0.00	12	6	33.33	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16950063	16950063	+	RNA	SNP	C	C	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	1	16950063	16950063	C	A	SNP	CROCCP2	ENST00000421700	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	8	0	0.00	12	4	25.00	-	-	-
FAF1	0	genome.wustl.edu	37	1	50907189	50907189	+	Nonsense_Mutation	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	1	50907189	50907189	G	A	SNP	FAF1	ENST00000371778	human	ensembl	69_37n	-1	known	nonsense	c.1876	p.Q626*	1.000	pfam_UBX,smart_UBX,pfscan_UBX	pfam_UBX,superfamily_UBA-like,smart_UAS,smart_UBX,pfscan_UBX	-	no_errors	FAF1	HGNC	ENSG00000185104	56	0	0.00	31	7	18.42	-	-	-
FAM21A	0	genome.wustl.edu	37	10	51853633	51853633	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	10	51853633	51853633	C	T	SNP	FAM21A	ENST00000282633	human	ensembl	69_37n	+1	known	missense	c.1136	p.T379M	0.370	NULL	NULL	-	no_errors	FAM21A	HGNC	ENSG00000099290	9	0	0.00	1	2	66.67	-	-	-
FAM71A	0	genome.wustl.edu	37	1	212799872	212799872	+	Silent	SNP	C	C	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	1	212799872	212799872	C	T	SNP	FAM71A	ENST00000294829	human	ensembl	69_37n	+1	known	silent	c.1653	p.N551	0.000	NULL	pfam_DUF3699	-	no_errors	FAM71A	HGNC	ENSG00000162771	50	0	0.00	24	4	14.29	-	-	-
GPC5	0	genome.wustl.edu	37	13	92101096	92101096	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	13	92101096	92101096	G	C	SNP	GPC5	ENST00000377067	human	ensembl	69_37n	+1	known	missense	c.245	p.R82P	0.047	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399	68	0	0.00	36	10	21.74	-	-	-
HPCAL1	0	genome.wustl.edu	37	2	10560114	10560114	+	Silent	SNP	C	C	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	2	10560114	10560114	C	T	SNP	HPCAL1	ENST00000307845	human	ensembl	69_37n	+1	known	silent	c.231	p.D77	0.908	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,prints_Recoverin	pfam_EF-hand,pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,prints_Recoverin	-	no_errors	HPCAL1	HGNC	ENSG00000115756	63	0	0.00	24	12	33.33	-	-	-
IFT52	0	genome.wustl.edu	37	20	42271138	42271138	+	Silent	SNP	A	A	G			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	20	42271138	42271138	A	G	SNP	IFT52	ENST00000373030	human	ensembl	69_37n	+1	known	silent	c.1140	p.E380	1.000	NULL	pfam_ABC_transp_unknown	-	no_errors	IFT52	HGNC	ENSG00000101052	104	0	0.00	28	8	21.62	-	-	-
KAT2B	0	genome.wustl.edu	37	3	20193909	20193910	+	Frame_Shift_Ins	INS	-	-	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	3	20193909	20193910	-	A	INS	KAT2B	ENST00000263754	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2391_2392	p.N797fs	1.000:1.000	pirsf_Hist_acetylase_PCAF,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom,prints_Bromodomain	-	no_errors	KAT2B	HGNC	ENSG00000114166	59	0	0.00	19	10	34.48	-	-	-
KIAA0100	0	genome.wustl.edu	37	17	26962549	26962549	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	17	26962549	26962549	G	C	SNP	KIAA0100	ENST00000005905	human	ensembl	69_37n	-1	known	missense	c.2056	p.L686V	0.010	NULL	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202	41	0	0.00	11	76	87.36	-	-	-
LGMN	0	genome.wustl.edu	37	14	93178044	93178044	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	14	93178044	93178044	G	A	SNP	LGMN	ENST00000334869	human	ensembl	69_37n	-1	known	missense	c.779	p.S260L	0.086	pfam_Peptidase_C13	pfam_Peptidase_C13,prints_Peptidase_C13	-	no_errors	LGMN	HGNC	ENSG00000100600	135	0	0.00	43	17	27.87	-	-	-
LRP12	0	genome.wustl.edu	37	8	105510194	105510194	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	8	105510194	105510194	C	T	SNP	LRP12	ENST00000424843	human	ensembl	69_37n	-1	known	missense	c.529	p.D177N	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_CUB,pfam_LDrepeatLR_classA_rpt,superfamily_CUB,superfamily_LDrepeatLR_classA_rpt,smart_CUB,smart_LDrepeatLR_classA_rpt,pfscan_CUB,pfscan_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	91	0	0.00	44	24	35.29	-	-	-
MAPK10	0	genome.wustl.edu	37	4	87028414	87028414	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	4	87028414	87028414	G	C	SNP	MAPK10	ENST00000359221	human	ensembl	69_37n	-1	known	missense	c.328	p.R110G	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_MAPK_JNK	-	no_errors	MAPK10	HGNC	ENSG00000109339	171	1	0.58	43	22	33.85	-	-	-
MUC17	0	genome.wustl.edu	37	7	100676392	100676392	+	Silent	SNP	T	T	C			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	7	100676392	100676392	T	C	SNP	MUC17	ENST00000306151	human	ensembl	69_37n	+1	known	silent	c.1695	p.P565	0.000	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	MUC17	HGNC	ENSG00000169876	181	0	0.00	43	13	23.21	-	-	-
MYO6	0	genome.wustl.edu	37	6	76596584	76596584	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	6	76596584	76596584	G	A	SNP	MYO6	ENST00000369981	human	ensembl	69_37n	+1	known	missense	c.2531	p.G844D	1.000	NULL	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO6	HGNC	ENSG00000196586	73	0	0.00	24	7	22.58	-	-	-
OLFML2A	0	genome.wustl.edu	37	9	127549306	127549306	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	9	127549306	127549306	G	A	SNP	OLFML2A	ENST00000373580	human	ensembl	69_37n	+1	known	missense	c.143	p.R48H	1.000	NULL	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2A	HGNC	ENSG00000185585	55	0	0.00	18	10	35.71	-	-	-
ORC3	0	genome.wustl.edu	37	6	88375529	88375529	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	6	88375529	88375529	G	A	SNP	ORC3	ENST00000257789	human	ensembl	69_37n	+1	known	missense	c.2011	p.E671K	1.000	NULL	pfam_ORC3	-	no_errors	ORC3	HGNC	ENSG00000135336	66	0	0.00	31	8	20.51	-	-	-
PDLIM1	0	genome.wustl.edu	37	10	97007096	97007096	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	10	97007096	97007096	G	C	SNP	PDLIM1	ENST00000329399	human	ensembl	69_37n	-1	known	missense	c.561	p.S187R	0.096	NULL	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,smart_ZASP,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM1	HGNC	ENSG00000107438	90	0	0.00	25	16	38.10	-	-	-
PKP1	0	genome.wustl.edu	37	1	201282596	201282596	+	Silent	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	1	201282596	201282596	G	A	SNP	PKP1	ENST00000263946	human	ensembl	69_37n	+1	known	silent	c.609	p.P203	0.141	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP1	HGNC	ENSG00000081277	65	0	0.00	22	10	31.25	-	-	-
RAB3GAP1	0	genome.wustl.edu	37	2	135848655	135848655	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	2	135848655	135848655	G	A	SNP	RAB3GAP1	ENST00000264158	human	ensembl	69_37n	+1	known	missense	c.238	p.V80I	1.000	NULL	NULL	-	no_errors	RAB3GAP1	HGNC	ENSG00000115839	109	0	0.00	26	13	33.33	-	-	-
THG1L	0	genome.wustl.edu	37	5	157166415	157166415	+	Silent	SNP	A	A	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	5	157166415	157166415	A	T	SNP	THG1L	ENST00000231198	human	ensembl	69_37n	+1	known	silent	c.822	p.P274	0.006	pfam_tRNAHis_GuaTrfase_cat,pirsf_tRNAHis_GuaTrfase_Thg1	pfam_tRNAHis_GuaTrfase_cat,superfamily_Restrct_endonuc-II-like,pirsf_tRNAHis_GuaTrfase_Thg1	-	no_errors	THG1L	HGNC	ENSG00000113272	56	0	0.00	15	6	28.57	-	-	-
TMEM132C	0	genome.wustl.edu	37	12	129189746	129189746	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	12	129189746	129189746	G	A	SNP	TMEM132C	ENST00000435159	human	ensembl	69_37n	+1	known	missense	c.2233	p.V745M	0.945	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	31	0	0.00	19	5	20.83	-	-	-
TMPRSS5	0	genome.wustl.edu	37	11	113570327	113570327	+	Silent	SNP	T	T	G			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	11	113570327	113570327	T	G	SNP	TMPRSS5	ENST00000299882	human	ensembl	69_37n	-1	known	silent	c.195	p.S65	0.155	NULL	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Srcr_rcpt-rel,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6	-	no_errors	TMPRSS5	HGNC	ENSG00000166682	62	0	0.00	20	5	20.00	-	-	-
ZSCAN22	0	genome.wustl.edu	37	19	58850657	58850657	+	Missense_Mutation	SNP	G	G	T			TCGA-GM-A2DA-01A-11D-A18P-09	TCGA-GM-A2DA-10C-01D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9e036b90-1cb2-4cb8-857d-09f2ca48e059	073ca5ca-7062-4b02-b5f4-49dbe64aa329	19	58850657	58850657	G	T	SNP	ZSCAN22	ENST00000329665	human	ensembl	69_37n	+1	known	missense	c.1441	p.V481F	0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN22	HGNC	ENSG00000182318	46	0	0.00	14	7	33.33	-	-	-
