Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCB7	0	genome.wustl.edu	37	X	74296484	74296484	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	X	74296484	74296484	C	T	SNP	ABCB7	ENST00000253577	human	ensembl	69_37n	-1	known	missense	c.462	p.M154I	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB7	HGNC	ENSG00000131269	95	0	0.00	37	25	40.32	-	-	-
ANKRD12	0	genome.wustl.edu	37	18	9256119	9256122	+	Frame_Shift_Del	DEL	AAAG	AAAG	-			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	AAAG	AAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	18	9256119	9256122	AAAG	-	DEL	ANKRD12	ENST00000262126	human	ensembl	69_37n	+1	known	frame_shift_del	c.2854_2857	p.E953fs	0.994:0.999:1.000:1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD12	HGNC	ENSG00000101745	28	0	0.00	10	6	37.50	-	-	-
ATG9A	0	genome.wustl.edu	37	2	220090180	220090180	+	Silent	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	2	220090180	220090180	C	T	SNP	ATG9A	ENST00000361242	human	ensembl	69_37n	-1	known	silent	c.327	p.K109	1.000	NULL	pfam_Autophagy-rel_prot_9,superfamily_Cyt_c_oxidase_su3	-	no_errors	ATG9A	HGNC	ENSG00000198925	94	0	0.00	42	13	23.64	-	-	-
ATP8B2	0	genome.wustl.edu	37	1	154319121	154319121	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	154319121	154319121	C	T	SNP	ATP8B2	ENST00000368489	human	ensembl	69_37n	+1	known	missense	c.3149	p.T1050M	1.000	tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP8B2	HGNC	ENSG00000143515	126	0	0.00	49	20	28.99	-	-	-
BRPF3	0	genome.wustl.edu	37	6	36182131	36182131	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	6	36182131	36182131	G	A	SNP	BRPF3	ENST00000357641	human	ensembl	69_37n	+1	known	missense	c.2957	p.G986E	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP,pfscan_PWWP,pfscan_Znf_PHD-finger,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRPF3	HGNC	ENSG00000096070	78	0	0.00	21	7	25.00	-	-	-
C17orf61	0	genome.wustl.edu	37	17	7307396	7307396	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	17	7307396	7307396	C	T	SNP	C17orf61	ENST00000302422	human	ensembl	69_37n	-1	known	missense	c.8	p.G3E	0.005	NULL	pfam_DUF423	-	no_errors	C17orf61	HGNC	ENSG00000205544	49	0	0.00	31	7	18.42	-	-	-
C22orf23	0	genome.wustl.edu	37	22	38340200	38340200	+	Silent	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	22	38340200	38340200	C	T	SNP	C22orf23	ENST00000249079	human	ensembl	69_37n	-1	known	silent	c.636	p.K212	0.973	pfam_UPF0193	pfam_UPF0193	-	no_errors	C22orf23	HGNC	ENSG00000128346	133	0	0.00	42	17	28.81	-	-	-
C3orf74	0	genome.wustl.edu	37	3	52097497	52097497	+	Nonsense_Mutation	SNP	G	G	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	3	52097497	52097497	G	C	SNP	C3orf74	ENST00000541313	human	ensembl	69_37n	-1	known	nonsense	c.71	p.S24*	0.401	NULL	NULL	-	no_errors	C3orf74	HGNC	ENSG00000256097	46	0	0.00	15	10	40.00	-	-	-
CHD8	0	genome.wustl.edu	37	14	21868628	21868628	+	Missense_Mutation	SNP	C	C	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	14	21868628	21868628	C	A	SNP	CHD8	ENST00000399982	human	ensembl	69_37n	-1	known	missense	c.4514	p.W1505L	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888	61	0	0.00	18	6	25.00	-	-	-
CUL5	0	genome.wustl.edu	37	11	107959361	107959361	+	Frame_Shift_Del	DEL	A	A	-			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	11	107959361	107959361	A	-	DEL	CUL5	ENST00000393094	human	ensembl	69_37n	+1	known	frame_shift_del	c.1286	p.E429fs	1.000	pfam_Cullin_N,superfamily_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL5	HGNC	ENSG00000166266	42	0	0.00	10	6	37.50	-	-	-
DGKD	0	genome.wustl.edu	37	2	234347021	234347021	+	Missense_Mutation	SNP	C	C	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	2	234347021	234347021	C	A	SNP	DGKD	ENST00000264057	human	ensembl	69_37n	+1	known	missense	c.1081	p.L361I	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,pfam_Pleckstrin_homology,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKD	HGNC	ENSG00000077044	92	0	0.00	29	17	36.96	-	-	-
EPHA7	0	genome.wustl.edu	37	6	94120444	94120444	+	Missense_Mutation	SNP	T	T	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	6	94120444	94120444	T	C	SNP	EPHA7	ENST00000369303	human	ensembl	69_37n	-1	known	missense	c.607	p.K203E	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom	-	no_errors	EPHA7	HGNC	ENSG00000135333	53	0	0.00	18	7	28.00	-	-	-
ERCC2	0	genome.wustl.edu	37	19	45856499	45856499	+	Splice_Site	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	19	45856499	45856499	C	T	SNP	ERCC2	ENST00000391945	human	ensembl	69_37n	-1	known	splice_site	c.1758+1	e18+1	1.000	-	-	-	no_errors	ERCC2	HGNC	ENSG00000104884	37	0	0.00	17	7	29.17	-	-	-
ETV5	0	genome.wustl.edu	37	3	185802069	185802069	+	Frame_Shift_Del	DEL	G	G	-			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	3	185802069	185802069	G	-	DEL	ETV5	ENST00000422039	human	ensembl	69_37n	-1	novel	frame_shift_del	c.233	p.P78fs	0.005	pfam_ETS_PEA3_N	pfam_ETS_PEA3_N	-	no_stop_codon	ETV5	HGNC	ENSG00000244405	11	0	0.00	4	2	33.33	-	-	-
FBRS	0	genome.wustl.edu	37	16	30673785	30673785	+	Missense_Mutation	SNP	C	C	G			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	16	30673785	30673785	C	G	SNP	FBRS	ENST00000356166	human	ensembl	69_37n	+1	known	missense	c.750	p.S250R	1.000	NULL	prints_AUTS2	-	no_errors	FBRS	HGNC	ENSG00000156860	123	0	0.00	44	15	25.42	-	-	-
FBXL22	0	genome.wustl.edu	37	15	63889651	63889651	+	Silent	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	15	63889651	63889651	C	T	SNP	FBXL22	ENST00000539570	human	ensembl	69_37n	+1	known	silent	c.60	p.L20	1.000	superfamily_F-box_dom_cyclin-like	superfamily_F-box_dom_cyclin-like	-	no_errors	AC118274.1	Clone_based_ensembl_gene	ENSG00000259662	57	0	0.00	22	8	26.67	-	-	-
FOXA1	0	genome.wustl.edu	37	14	38061248	38061248	+	Missense_Mutation	SNP	G	G	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	14	38061248	38061248	G	C	SNP	FOXA1	ENST00000250448	human	ensembl	69_37n	-1	known	missense	c.741	p.H247Q	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,pfam_Fork-head_N,pfam_Forkhead_box_C,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXA1	HGNC	ENSG00000129514	84	0	0.00	38	14	26.42	-	-	-
GLUL	0	genome.wustl.edu	37	1	182354468	182354468	+	RNA	SNP	A	A	G			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	182354468	182354468	A	G	SNP	GLUL	ENST00000491322	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GLUL	HGNC	ENSG00000135821	31	0	0.00	13	9	40.91	-	-	-
GPR174	0	genome.wustl.edu	37	X	78426712	78426712	+	Missense_Mutation	SNP	C	C	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	X	78426712	78426712	C	A	SNP	GPR174	ENST00000276077	human	ensembl	69_37n	+1	known	missense	c.208	p.L70I	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	GPR174	HGNC	ENSG00000147138	91	0	0.00	31	12	27.91	-	-	-
HEYL	0	genome.wustl.edu	37	1	40097235	40097235	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	40097235	40097235	C	T	SNP	HEYL	ENST00000372852	human	ensembl	69_37n	-1	known	missense	c.164	p.R55H	1.000	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	pfam_HLH_DNA-bd,pfam_Orange,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,smart_Orange_subgr,pfscan_Orange,pfscan_HLH_DNA-bd	-	no_errors	HEYL	HGNC	ENSG00000163909	126	0	0.00	48	20	29.41	-	-	-
HIST1H2AC	0	genome.wustl.edu	37	6	26124464	26124464	+	Missense_Mutation	SNP	T	T	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	6	26124464	26124464	T	C	SNP	HIST1H2AC	ENST00000314088	human	ensembl	69_37n	+1	known	missense	c.4	p.S2P	1.000	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AC	HGNC	ENSG00000180573	115	0	0.00	61	22	26.51	-	-	-
HOXC9	0	genome.wustl.edu	37	12	54396402	54396402	+	Missense_Mutation	SNP	C	C	G			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	12	54396402	54396402	C	G	SNP	HOXC9	ENST00000303450	human	ensembl	69_37n	+1	known	missense	c.727	p.R243G	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pirsf_Homeobox_Hox9,prints_Homeobox_metazoa,pfscan_Homeodomain	pfam_Hox9_activation_N,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pirsf_Homeobox_Hox9,prints_Homeobox_metazoa,pfscan_Homeodomain	-	no_errors	HOXC9	HGNC	ENSG00000180806	33	0	0.00	14	7	33.33	-	-	-
IGSF3	0	genome.wustl.edu	37	1	117142614	117142614	+	Nonsense_Mutation	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	117142614	117142614	G	A	SNP	IGSF3	ENST00000318837	human	ensembl	69_37n	-1	known	nonsense	c.2038	p.R680*	0.285	smart_Ig_sub	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	IGSF3	HGNC	ENSG00000143061	119	0	0.00	50	15	23.08	-	-	-
KIAA0319L	0	genome.wustl.edu	37	1	35907883	35907883	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	35907883	35907883	C	T	SNP	KIAA0319L	ENST00000325722	human	ensembl	69_37n	-1	known	missense	c.2834	p.G945E	1.000	NULL	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319L	HGNC	ENSG00000142687	55	0	0.00	25	15	37.50	-	-	-
KIAA0922	0	genome.wustl.edu	37	4	154471274	154471274	+	Missense_Mutation	SNP	G	G	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	4	154471274	154471274	G	T	SNP	KIAA0922	ENST00000409959	human	ensembl	69_37n	+1	known	missense	c.289	p.V97F	1.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	KIAA0922	HGNC	ENSG00000121210	67	0	0.00	36	4	10.00	-	-	-
KLHL6	0	genome.wustl.edu	37	3	183217542	183217542	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	3	183217542	183217542	G	A	SNP	KLHL6	ENST00000341319	human	ensembl	69_37n	-1	known	missense	c.983	p.T328M	1.000	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL6	HGNC	ENSG00000172578	46	0	0.00	27	11	28.95	-	-	-
MCTP2	0	genome.wustl.edu	37	15	94983526	94983526	+	Missense_Mutation	SNP	A	A	G			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	15	94983526	94983526	A	G	SNP	MCTP2	ENST00000357742	human	ensembl	69_37n	+1	known	missense	c.2207	p.Q736R	1.000	pfam_PRibTrfase_C	pfam_C2_Ca-dep,pfam_PRibTrfase_C,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	MCTP2	HGNC	ENSG00000140563	77	0	0.00	38	17	30.91	-	-	-
MMP10	0	genome.wustl.edu	37	11	102647065	102647065	+	Frame_Shift_Del	DEL	A	A	-			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	11	102647065	102647065	A	-	DEL	MMP10	ENST00000279441	human	ensembl	69_37n	-1	known	frame_shift_del	c.878	p.L293fs	0.985	pirsf_Pept_M10A_matrix_strom,superfamily_Hemopexin/matrixin	pirsf_Pept_M10A_matrix_strom,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin/matrixin_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,prints_Pept_M10A_matrixin	-	no_errors	MMP10	HGNC	ENSG00000166670	58	0	0.00	17	2	10.53	-	-	-
MTHFD1L	0	genome.wustl.edu	37	6	151277147	151277147	+	Silent	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	6	151277147	151277147	C	T	SNP	MTHFD1L	ENST00000367321	human	ensembl	69_37n	+1	known	silent	c.1743	p.D581	1.000	pfam_Formate_THF_ligase	pfam_Formate_THF_ligase,pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD1L	HGNC	ENSG00000120254	54	0	0.00	26	11	29.73	-	-	-
MTM1	0	genome.wustl.edu	37	X	149828874	149828874	+	Missense_Mutation	SNP	T	T	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	X	149828874	149828874	T	C	SNP	MTM1	ENST00000370396	human	ensembl	69_37n	+1	known	missense	c.1384	p.F462L	0.654	smart_Tyr_Pase_cat	pfam_Myotub-related,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase	-	no_errors	MTM1	HGNC	ENSG00000171100	59	0	0.00	18	6	25.00	-	-	-
MUC12	0	genome.wustl.edu	37	7	100637179	100637179	+	Missense_Mutation	SNP	C	C	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	7	100637179	100637179	C	A	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.3764	p.T1255N	0.000	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	273	0	0.00	148	25	14.45	-	-	-
MYOM2	0	genome.wustl.edu	37	8	1998981	1998981	+	Nonsense_Mutation	SNP	C	C	G			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	8	1998981	1998981	C	G	SNP	MYOM2	ENST00000262113	human	ensembl	69_37n	+1	known	nonsense	c.101	p.S34*	0.117	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYOM2	HGNC	ENSG00000036448	83	0	0.00	18	18	50.00	-	-	-
NFATC1	0	genome.wustl.edu	37	18	77170736	77170736	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	18	77170736	77170736	C	T	SNP	NFATC1	ENST00000427363	human	ensembl	69_37n	+1	known	missense	c.461	p.T154M	0.990	NULL	pfam_RHD,pfam_IPT_TIG_rcpt,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT_TIG_rcpt,prints_NFAT,pfscan_RHD	-	no_errors	NFATC1	HGNC	ENSG00000131196	109	1	0.90	38	10	20.83	-	-	-
NTPCR	0	genome.wustl.edu	37	1	233105442	233105442	+	RNA	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	233105442	233105442	G	A	SNP	NTPCR	ENST00000490098	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NTPCR	HGNC	ENSG00000135778	11	0	0.00	3	7	70.00	-	-	-
NTRK1	0	genome.wustl.edu	37	1	156838347	156838347	+	Missense_Mutation	SNP	G	G	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	156838347	156838347	G	C	SNP	NTRK1	ENST00000524377	human	ensembl	69_37n	+1	known	missense	c.625	p.D209H	0.852	pfscan_Ig-like	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Cys-rich_flank_reg_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_neurotrophic_rcpt_1,prints_Tyr_kinase_NGF_rcpt	-	no_errors	NTRK1	HGNC	ENSG00000198400	127	0	0.00	46	7	13.21	-	-	-
NXN	0	genome.wustl.edu	37	17	704332	704332	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	17	704332	704332	G	A	SNP	NXN	ENST00000336868	human	ensembl	69_37n	-1	known	missense	c.1165	p.P389S	1.000	superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	-	no_errors	NXN	HGNC	ENSG00000167693	41	0	0.00	30	9	23.08	-	-	-
ONECUT1	0	genome.wustl.edu	37	15	53081276	53081276	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	15	53081276	53081276	C	T	SNP	ONECUT1	ENST00000305901	human	ensembl	69_37n	-1	known	missense	c.806	p.R269Q	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,pfscan_Hmoeo_CUT	-	no_errors	ONECUT1	HGNC	ENSG00000169856	101	0	0.00	41	8	16.33	-	-	-
OTUD4	0	genome.wustl.edu	37	4	146032219	146032219	+	RNA	SNP	A	A	G			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	4	146032219	146032219	A	G	SNP	OTUD4	ENST00000455611	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	OTUD4	HGNC	ENSG00000164164	102	0	0.00	66	25	27.47	-	-	-
PCDHB18	0	genome.wustl.edu	37	5	140614330	140614330	+	RNA	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	5	140614330	140614330	C	T	SNP	PCDHB18	ENST00000526308	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001	62	0	0.00	19	7	26.92	-	-	-
PIK3R4	0	genome.wustl.edu	37	3	130452625	130452625	+	Missense_Mutation	SNP	G	G	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	3	130452625	130452625	G	C	SNP	PIK3R4	ENST00000356763	human	ensembl	69_37n	-1	known	missense	c.1217	p.A406G	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_cat_dom,pfam_WD40_repeat,pfam_HEAT,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_WD40_repeat,pfscan_HEAT_type_2,pfscan_Prot_kinase_cat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	PIK3R4	HGNC	ENSG00000196455	60	0	0.00	21	10	32.26	-	-	-
PLEKHA6	0	genome.wustl.edu	37	1	204228630	204228630	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	204228630	204228630	C	T	SNP	PLEKHA6	ENST00000272203	human	ensembl	69_37n	-1	known	missense	c.763	p.E255K	0.995	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	54	0	0.00	25	11	30.56	-	-	-
POLR2F	0	genome.wustl.edu	37	22	38382254	38382254	+	Missense_Mutation	SNP	T	T	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	22	38382254	38382254	T	C	SNP	POLR2F	ENST00000333418	human	ensembl	69_37n	+1	putative	missense	c.55	p.C19R	0.000	NULL	NULL	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	POLR2F	HGNC	ENSG00000100142	60	0	0.00	22	4	15.38	-	-	-
RCVRN	0	genome.wustl.edu	37	17	9808318	9808318	+	Silent	SNP	G	G	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	17	9808318	9808318	G	T	SNP	RCVRN	ENST00000226193	human	ensembl	69_37n	-1	known	silent	c.180	p.T60	0.989	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,prints_Recoverin	-	no_errors	RCVRN	HGNC	ENSG00000109047	142	0	0.00	49	20	28.99	-	-	-
RLN2	0	genome.wustl.edu	37	9	5300176	5300176	+	Missense_Mutation	SNP	C	C	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	9	5300176	5300176	C	A	SNP	RLN2	ENST00000381627	human	ensembl	69_37n	-1	known	missense	c.480	p.K160N	0.027	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Relaxin,prints_Insulin_family	-	no_errors	RLN2	HGNC	ENSG00000107014	81	0	0.00	37	15	28.85	-	-	-
RRNAD1	0	genome.wustl.edu	37	1	156703418	156703418	+	Splice_Site	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	1	156703418	156703418	G	A	SNP	RRNAD1	ENST00000462397	human	ensembl	69_37n	+1	putative	splice_site	c.NULL	NULL	0.000	-	-	-	no_errors	RRNAD1	HGNC	ENSG00000143303	28	0	0.00	9	6	40.00	-	-	-
RSPH6A	0	genome.wustl.edu	37	19	46299147	46299149	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	19	46299147	46299149	CCT	-	DEL	RSPH6A	ENST00000221538	human	ensembl	69_37n	-1	known	in_frame_del	c.2134_2132	p.E711in_frame_del	1.000:1.000:1.000	NULL	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941	45	0	0.00	26	3	10.34	-	-	-
SBNO1	0	genome.wustl.edu	37	12	123801768	123801768	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	12	123801768	123801768	C	T	SNP	SBNO1	ENST00000420886	human	ensembl	69_37n	-1	known	missense	c.2935	p.G979R	1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697	61	0	0.00	31	15	32.61	-	-	-
SEC22C	0	genome.wustl.edu	37	3	42602687	42602687	+	Missense_Mutation	SNP	G	G	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	3	42602687	42602687	G	T	SNP	SEC22C	ENST00000264454	human	ensembl	69_37n	-1	known	missense	c.448	p.P150T	0.991	NULL	superfamily_Longin-like_dom,pfscan_Longin_dom	-	no_errors	SEC22C	HGNC	ENSG00000093183	44	0	0.00	19	15	44.12	-	-	-
SLC12A4	0	genome.wustl.edu	37	16	67981664	67981664	+	Silent	SNP	G	G	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	16	67981664	67981664	G	T	SNP	SLC12A4	ENST00000422611	human	ensembl	69_37n	-1	known	silent	c.1881	p.L627	0.997	pfam_AA-permease_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A4	HGNC	ENSG00000124067	35	0	0.00	15	3	16.67	-	-	-
SLC38A9	0	genome.wustl.edu	37	5	54929602	54929602	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	5	54929602	54929602	G	A	SNP	SLC38A9	ENST00000505708	human	ensembl	69_37n	-1	known	missense	c.1127	p.S376F	1.000	NULL	pfam_AA_transpt_TM	-	no_errors	SLC38A9	HGNC	ENSG00000177058	58	0	0.00	29	11	27.50	-	-	-
SLC9A9	0	genome.wustl.edu	37	3	143412150	143412150	+	Splice_Site	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	3	143412150	143412150	C	T	SNP	SLC9A9	ENST00000316549	human	ensembl	69_37n	-1	known	splice_site	c.534-1	e5-1	1.000	-	-	-	no_errors	SLC9A9	HGNC	ENSG00000181804	63	0	0.00	21	10	32.26	-	-	-
SMCHD1	0	genome.wustl.edu	37	18	2778215	2778215	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	18	2778215	2778215	C	T	SNP	SMCHD1	ENST00000320876	human	ensembl	69_37n	+1	known	missense	c.5525	p.A1842V	1.000	pfam_SMC_hinge,superfamily_SMC_hinge,smart_SMC_hinge	pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_ATPase-like_ATP-bd,smart_SMC_hinge	-	no_errors	SMCHD1	HGNC	ENSG00000101596	64	0	0.00	18	11	37.93	-	-	-
STAP2	0	genome.wustl.edu	37	19	4325395	4325395	+	Missense_Mutation	SNP	T	T	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	19	4325395	4325395	T	C	SNP	STAP2	ENST00000314714	human	ensembl	69_37n	-1	known	missense	c.977	p.D326G	0.014	NULL	pfscan_SH2	-	no_errors	STAP2	HGNC	ENSG00000178078	57	0	0.00	41	15	26.79	-	-	-
SUPT16H	0	genome.wustl.edu	37	14	21840141	21840141	+	Silent	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	14	21840141	21840141	G	A	SNP	SUPT16H	ENST00000216297	human	ensembl	69_37n	-1	known	silent	c.222	p.I74	1.000	NULL	pfam_FACT_Spt16p,pfam_Pept_M24_structural-domain,pfam_DUF1747,superfamily_Pept_M24_structural-domain	-	no_errors	SUPT16H	HGNC	ENSG00000092201	117	0	0.00	64	19	22.89	-	-	-
TASP1	0	genome.wustl.edu	37	20	13415772	13415772	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	20	13415772	13415772	C	T	SNP	TASP1	ENST00000337743	human	ensembl	69_37n	-1	known	missense	c.1015	p.V339M	0.986	NULL	pfam_Peptidase_T2	-	no_errors	TASP1	HGNC	ENSG00000089123	33	0	0.00	12	7	36.84	-	-	-
TEP1	0	genome.wustl.edu	37	14	20852245	20852245	+	Missense_Mutation	SNP	C	C	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	14	20852245	20852245	C	A	SNP	TEP1	ENST00000262715	human	ensembl	69_37n	-1	known	missense	c.3486	p.R1162S	0.999	pfscan_NACHT_NTPase	pfam_TROVE,pfam_TEP1_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_NACHT_NTPase,pfscan_TROVE,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TEP1	HGNC	ENSG00000129566	105	0	0.00	36	12	25.00	-	-	-
TTC7B	0	genome.wustl.edu	37	14	91007734	91007734	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	14	91007734	91007734	G	A	SNP	TTC7B	ENST00000357056	human	ensembl	69_37n	-1	known	missense	c.2561	p.T854I	1.000	NULL	pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC7B	HGNC	ENSG00000165914	56	0	0.00	35	7	16.67	-	-	-
TUBB8	0	genome.wustl.edu	37	10	94654	94654	+	Missense_Mutation	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	10	94654	94654	C	T	SNP	TUBB8	ENST00000328974	human	ensembl	69_37n	-1	known	missense	c.178	p.V60M	1.000	pfam_Tubulin_FtsZ_GTPase,pfam_Misato_II_myosin-like,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_myosin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB8	HGNC	ENSG00000173876	93	0	0.00	46	15	24.59	-	-	-
XPNPEP3	0	genome.wustl.edu	37	22	41258059	41258059	+	RNA	SNP	C	C	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	22	41258059	41258059	C	T	SNP	XPNPEP3	ENST00000482652	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	XPNPEP3	HGNC	ENSG00000196236	64	0	0.00	27	7	20.59	-	-	-
ZC3H7B	0	genome.wustl.edu	37	22	41716713	41716713	+	Missense_Mutation	SNP	A	A	T			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	22	41716713	41716713	A	T	SNP	ZC3H7B	ENST00000351589	human	ensembl	69_37n	+1	known	missense	c.49	p.I17F	1.000	NULL	pfam_Znf_CCCH,pfam_TPR-1,smart_TPR_repeat,smart_Znf_CCCH,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ZC3H7B	HGNC	ENSG00000100403	59	0	0.00	24	14	36.84	-	-	-
ZFP57	0	genome.wustl.edu	37	6	29641083	29641083	+	Missense_Mutation	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	6	29641083	29641083	G	A	SNP	ZFP57	ENST00000488757	human	ensembl	69_37n	-1	known	missense	c.805	p.R269W	0.049	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP57	HGNC	ENSG00000204644	105	0	0.00	51	18	25.71	-	-	-
ZNF35	0	genome.wustl.edu	37	3	44701310	44701310	+	Silent	SNP	G	G	A			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	3	44701310	44701310	G	A	SNP	ZNF35	ENST00000396056	human	ensembl	69_37n	+1	known	silent	c.1455	p.Q485	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF35	HGNC	ENSG00000169981	36	0	0.00	13	11	45.83	-	-	-
ZNF385A	0	genome.wustl.edu	37	12	54769725	54769725	+	Missense_Mutation	SNP	T	T	C			TCGA-OL-A66J-01A-11D-A29N-09	TCGA-OL-A66J-10A-01D-A29N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2b9b36e-1584-453c-a2cb-6455ef27e088	65db66df-0e02-40dd-9c2a-cc353d980700	12	54769725	54769725	T	C	SNP	ZNF385A	ENST00000338010	human	ensembl	69_37n	-1	known	missense	c.161	p.Q54R	1.000	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZNF385A	HGNC	ENSG00000161642	45	0	0.00	17	11	39.29	-	-	-
