Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
DGKB	1607	hgsc.bcm.edu	36	7	14613622	14613622	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
GPNMB	10457	hgsc.bcm.edu	36	7	23263169	23263169	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
EGFR	1956	hgsc.bcm.edu	36	7	55189204	55189204	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
YWHAG	7532	hgsc.bcm.edu	36	7	75797403	75797403	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRRAP	8295	hgsc.bcm.edu	36	7	98331347	98331347	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRRAP	8295	hgsc.bcm.edu	36	7	98439827	98439827	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RINT1	60561	hgsc.bcm.edu	36	7	104994979	104994979	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MDFIC	29969	hgsc.bcm.edu	36	7	114406914	114406914	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
UBE2H	7328	hgsc.bcm.edu	36	7	129266360	129266360	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BRAF	673	hgsc.bcm.edu	36	7	140099646	140099646	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BRAF	673	hgsc.bcm.edu	36	7	140127918	140127918	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRPV6	55503	hgsc.bcm.edu	36	7	142282444	142282444	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
EZH2	2146	hgsc.bcm.edu	36	7	148174556	148174556	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C20orf194	25943	hgsc.bcm.edu	36	20	3188165	3188165	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HM13	81502	hgsc.bcm.edu	36	20	29600527	29600527	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIF3B	9371	hgsc.bcm.edu	36	20	30361860	30361860	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ASXL1	171023	hgsc.bcm.edu	36	20	30486571	30486571	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FAM83D	81610	hgsc.bcm.edu	36	20	37014246	37014246	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
YTHDF1	54915	hgsc.bcm.edu	36	20	61305516	61305516	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PRIC285	85441	hgsc.bcm.edu	36	20	61671299	61671299	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PI4KA	5297	hgsc.bcm.edu	36	22	19487514	19487514	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TBC1D22A	25771	hgsc.bcm.edu	36	22	45886110	45886110	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR4K13	390433	hgsc.bcm.edu	36	14	19571895	19571895	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
EDDM3B	0	hgsc.bcm.edu	36	14	20308227	20308227	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FUT8	2530	hgsc.bcm.edu	36	14	65205926	65205926	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ATP6V1D	51382	hgsc.bcm.edu	36	14	66875110	66875110	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ADAM21	8747	hgsc.bcm.edu	36	14	69994801	69994801	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C14orf159	80017	hgsc.bcm.edu	36	14	90735955	90735955	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SCAMP4	113178	hgsc.bcm.edu	36	19	1874150	1874150	+	Silent	SNP	C	C	T	rs61742039	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KDM4B	23030	hgsc.bcm.edu	36	19	5061773	5061773	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
AKAP8L	26993	hgsc.bcm.edu	36	19	15369591	15369591	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CYP4F12	66002	hgsc.bcm.edu	36	19	15668768	15668768	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PLVAP	83483	hgsc.bcm.edu	36	19	17349057	17349057	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
IL12RB1	3594	hgsc.bcm.edu	36	19	18054023	18054023	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
POU2F2	5452	hgsc.bcm.edu	36	19	47318523	47318523	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ZNF224	7767	hgsc.bcm.edu	36	19	49303508	49303508	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LIG1	26018	hgsc.bcm.edu	36	19	53348953	53348953	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ZNF28	7576	hgsc.bcm.edu	36	19	57995686	57995686	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LILRB1	10859	hgsc.bcm.edu	36	19	59836414	59836414	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIR2DL1	3802	hgsc.bcm.edu	36	19	59976738	59976738	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CLN8	2055	hgsc.bcm.edu	36	8	1707012	1707012	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CSMD1	64478	hgsc.bcm.edu	36	8	3232426	3232426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ADAM28	10863	hgsc.bcm.edu	36	8	24248941	24248941	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
DOCK5	80005	hgsc.bcm.edu	36	8	25303678	25303678	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
EYA1	2138	hgsc.bcm.edu	36	8	72290419	72290419	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRPA1	8989	hgsc.bcm.edu	36	8	73143829	73143829	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PI15	51050	hgsc.bcm.edu	36	8	75924001	75924001	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RUNX1T1	862	hgsc.bcm.edu	36	8	93067627	93067627	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
VPS13B	157680	hgsc.bcm.edu	36	8	100548937	100548937	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CTHRC1	115908	hgsc.bcm.edu	36	8	104459601	104459601	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RIMS2	9699	hgsc.bcm.edu	36	8	104967453	104967453	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CSMD3	114788	hgsc.bcm.edu	36	8	113325859	113325859	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CSMD3	114788	hgsc.bcm.edu	36	8	113335708	113335708	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CSMD3	114788	hgsc.bcm.edu	36	8	113386181	113386181	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
COLEC10	10584	hgsc.bcm.edu	36	8	120187264	120187264	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ZNF572	137209	hgsc.bcm.edu	36	8	126059226	126059226	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ASAP1	50807	hgsc.bcm.edu	36	8	131439540	131439540	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TG	7038	hgsc.bcm.edu	36	8	134103511	134103511	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LY6H	4062	hgsc.bcm.edu	36	8	144311599	144311599	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C1orf70	339453	hgsc.bcm.edu	36	1	1460853	1460853	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PRDM16	63976	hgsc.bcm.edu	36	1	3291619	3291619	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CHD5	450091	hgsc.bcm.edu	36	1	6150869	6150869	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PADI4	23569	hgsc.bcm.edu	36	1	17541430	17541430	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
UBR4	23352	hgsc.bcm.edu	36	1	19319418	19319418	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NIPAL3	57185	hgsc.bcm.edu	36	1	24655350	24655350	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ZFYVE9	9372	hgsc.bcm.edu	36	1	52571154	52571154	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KANK4	163782	hgsc.bcm.edu	36	1	62512125	62512125	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CTH	23584	hgsc.bcm.edu	36	1	70662656	70662656	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FPGT-TNNI3K	0	hgsc.bcm.edu	36	1	74474412	74474412	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PIGK	10026	hgsc.bcm.edu	36	1	77392876	77392876	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C1orf59	113802	hgsc.bcm.edu	36	1	108998945	108998945	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FNDC7	163479	hgsc.bcm.edu	36	1	109075031	109075031	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
AHCYL1	10768	hgsc.bcm.edu	36	1	110362131	110362131	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRIM33	51592	hgsc.bcm.edu	36	1	114741924	114741924	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CHD1L	9557	hgsc.bcm.edu	36	1	145222750	145222750	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FLG	2312	hgsc.bcm.edu	36	1	150543512	150543512	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C1orf9	51430	hgsc.bcm.edu	36	1	170825086	170825086	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PAPPA2	60676	hgsc.bcm.edu	36	1	174935188	174935188	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LAMC1	3915	hgsc.bcm.edu	36	1	181366167	181366167	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
IVNS1ABP	10625	hgsc.bcm.edu	36	1	183545155	183545155	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HMCN1	83872	hgsc.bcm.edu	36	1	184273690	184273690	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RGS18	64407	hgsc.bcm.edu	36	1	190395037	190395037	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CDC73	79577	hgsc.bcm.edu	36	1	191448182	191448182	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
IKBKE	9641	hgsc.bcm.edu	36	1	204716304	204716304	+	Silent	SNP	G	G	A	rs41296030	byFrequency	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CR2	1380	hgsc.bcm.edu	36	1	205713074	205713074	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
USH2A	7399	hgsc.bcm.edu	36	1	214529310	214529310	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRIM67	440730	hgsc.bcm.edu	36	1	229416298	229416298	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LYST	1130	hgsc.bcm.edu	36	1	234036548	234036548	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NLRP3	114548	hgsc.bcm.edu	36	1	245673983	245673983	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR2B11	127623	hgsc.bcm.edu	36	1	245681408	245681408	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRPM5	29850	hgsc.bcm.edu	36	11	2391946	2391946	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PIK3C2A	5286	hgsc.bcm.edu	36	11	17083356	17083356	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
DEPDC7	91614	hgsc.bcm.edu	36	11	33006758	33006758	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RAG1	5896	hgsc.bcm.edu	36	11	36553248	36553248	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR5AS1	219447	hgsc.bcm.edu	36	11	55555087	55555087	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR5B21	219968	hgsc.bcm.edu	36	11	58031905	58031905	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
AHNAK	79026	hgsc.bcm.edu	36	11	62055266	62055266	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SF1	7536	hgsc.bcm.edu	36	11	64300623	64300623	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RNF169	254225	hgsc.bcm.edu	36	11	74224972	74224972	+	Nonsense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
INTS4	92105	hgsc.bcm.edu	36	11	77349753	77349753	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BIRC3	330	hgsc.bcm.edu	36	11	101712729	101712729	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
DYNC2H1	79659	hgsc.bcm.edu	36	11	102611636	102611636	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ATM	472	hgsc.bcm.edu	36	11	107706169	107706169	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ATM	472	hgsc.bcm.edu	36	11	107706171	107706171	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
USP28	57646	hgsc.bcm.edu	36	11	113175268	113175268	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CEP164	22897	hgsc.bcm.edu	36	11	116737796	116737796	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CD3E	916	hgsc.bcm.edu	36	11	117691431	117691431	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BMP6	654	hgsc.bcm.edu	36	6	7790410	7790410	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
DEK	7913	hgsc.bcm.edu	36	6	18344667	18344667	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NEU1	4758	hgsc.bcm.edu	36	6	31935938	31935938	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
DNAH8	1769	hgsc.bcm.edu	36	6	38948750	38948750	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
UNC5CL	222643	hgsc.bcm.edu	36	6	41106193	41106193	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CUL9	23113	hgsc.bcm.edu	36	6	43296989	43296989	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TTBK1	84630	hgsc.bcm.edu	36	6	43335393	43335393	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TFAP2B	7021	hgsc.bcm.edu	36	6	50911771	50911771	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PHF3	23469	hgsc.bcm.edu	36	6	64447910	64447910	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CD109	135228	hgsc.bcm.edu	36	6	74574677	74574677	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FHL5	9457	hgsc.bcm.edu	36	6	97170348	97170348	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ASCC3	10973	hgsc.bcm.edu	36	6	101064636	101064636	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HACE1	57531	hgsc.bcm.edu	36	6	105284881	105284881	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
AKD1	221264	hgsc.bcm.edu	36	6	110013025	110013025	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
REV3L	5980	hgsc.bcm.edu	36	6	111735442	111735442	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
AHI1	54806	hgsc.bcm.edu	36	6	135791533	135791533	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TNFAIP3	7128	hgsc.bcm.edu	36	6	138237802	138237802	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SYNE1	23345	hgsc.bcm.edu	36	6	152679810	152679810	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RABEP1	9135	hgsc.bcm.edu	36	17	5227143	5227143	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TEKT1	83659	hgsc.bcm.edu	36	17	6663237	6663237	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TP53	7157	hgsc.bcm.edu	36	17	7518947	7518947	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MYH1	4619	hgsc.bcm.edu	36	17	10343084	10343084	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
DNAH9	1770	hgsc.bcm.edu	36	17	11628477	11628477	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KLHL10	317719	hgsc.bcm.edu	36	17	37257072	37257072	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BRCA1	672	hgsc.bcm.edu	36	17	38509764	38509764	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NGFR	4804	hgsc.bcm.edu	36	17	44938828	44938828	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BCAS3	54828	hgsc.bcm.edu	36	17	56300825	56300825	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
DNAH17	8632	hgsc.bcm.edu	36	17	74022603	74022603	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CBX2	84733	hgsc.bcm.edu	36	17	75373234	75373234	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FASN	2194	hgsc.bcm.edu	36	17	77636057	77636057	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HEXDC	284004	hgsc.bcm.edu	36	17	77988447	77988447	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CXADR	1525	hgsc.bcm.edu	36	21	17855580	17855580	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SON	6651	hgsc.bcm.edu	36	21	33848751	33848751	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HLCS	3141	hgsc.bcm.edu	36	21	37231068	37231068	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TMPRSS2	7113	hgsc.bcm.edu	36	21	41774301	41774301	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KRTAP10-11	386678	hgsc.bcm.edu	36	21	44891299	44891299	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
WDR24	84219	hgsc.bcm.edu	36	16	679464	679464	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SLX4	0	hgsc.bcm.edu	36	16	3596514	3596514	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PRKCB	5579	hgsc.bcm.edu	36	16	24073626	24073626	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MVP	50951	hgsc.bcm.edu	36	16	29763478	29763478	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ZNF423	23090	hgsc.bcm.edu	36	16	48228303	48228303	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KCTD19	146212	hgsc.bcm.edu	36	16	65885118	65885118	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HYDIN	54768	hgsc.bcm.edu	36	16	69421132	69421132	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CDYL2	124359	hgsc.bcm.edu	36	16	79212289	79212289	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ROCK1	6093	hgsc.bcm.edu	36	18	16862854	16862854	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LAMA3	3910	hgsc.bcm.edu	36	18	19692762	19692762	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KLHL14	57565	hgsc.bcm.edu	36	18	28529484	28529484	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C18orf34	374864	hgsc.bcm.edu	36	18	28926860	28926860	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIAA1632	57724	hgsc.bcm.edu	36	18	41704589	41704589	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SMAD4	4089	hgsc.bcm.edu	36	18	46827584	46827584	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SMAD4	4089	hgsc.bcm.edu	36	18	46858697	46858697	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CCDC102B	79839	hgsc.bcm.edu	36	18	64655533	64655533	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ACVR2B	93	hgsc.bcm.edu	36	3	38496292	38496292	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CTNNB1	1499	hgsc.bcm.edu	36	3	41241158	41241158	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PRKAR2A	5576	hgsc.bcm.edu	36	3	48764622	48764622	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ADAMTS9	56999	hgsc.bcm.edu	36	3	64522389	64522389	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
EPHA3	2042	hgsc.bcm.edu	36	3	89342105	89342105	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BBX	56987	hgsc.bcm.edu	36	3	108918170	108918170	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIAA1524	57650	hgsc.bcm.edu	36	3	109764709	109764709	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIAA2018	205717	hgsc.bcm.edu	36	3	114862664	114862664	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FSTL1	11167	hgsc.bcm.edu	36	3	121613429	121613429	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ABTB1	80325	hgsc.bcm.edu	36	3	128881620	128881620	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PIK3R4	30849	hgsc.bcm.edu	36	3	131908667	131908667	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BFSP2	8419	hgsc.bcm.edu	36	3	134674067	134674067	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TF	7018	hgsc.bcm.edu	36	3	134950117	134950117	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
EPHB1	2047	hgsc.bcm.edu	36	3	136153347	136153347	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ATP1B3	483	hgsc.bcm.edu	36	3	143078386	143078386	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PIK3CA	5290	hgsc.bcm.edu	36	3	180421626	180421626	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LAMP3	27074	hgsc.bcm.edu	36	3	184341065	184341065	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C3orf43	255798	hgsc.bcm.edu	36	3	197719525	197719525	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C12orf5	57103	hgsc.bcm.edu	36	12	4329321	4329321	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
A2M	2	hgsc.bcm.edu	36	12	9123528	9123528	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
IFLTD1	160492	hgsc.bcm.edu	36	12	25564159	25564159	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PRICKLE1	144165	hgsc.bcm.edu	36	12	41144823	41144823	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SLC4A8	9498	hgsc.bcm.edu	36	12	50143743	50143743	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR10A7	121364	hgsc.bcm.edu	36	12	53901832	53901832	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ESYT1	23344	hgsc.bcm.edu	36	12	54817624	54817624	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SYT1	6857	hgsc.bcm.edu	36	12	78203760	78203760	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MYF6	4618	hgsc.bcm.edu	36	12	79625778	79625778	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
UHRF1BP1L	23074	hgsc.bcm.edu	36	12	98977381	98977381	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SELPLG	6404	hgsc.bcm.edu	36	12	107541743	107541743	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RBM19	9904	hgsc.bcm.edu	36	12	112859281	112859281	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
VSIG10	0	hgsc.bcm.edu	36	12	117004411	117004411	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SRRM4	0	hgsc.bcm.edu	36	12	118052876	118052876	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RYR3	6263	hgsc.bcm.edu	36	15	31680949	31680949	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ELL3	80237	hgsc.bcm.edu	36	15	41856018	41856018	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRPM7	54822	hgsc.bcm.edu	36	15	48689162	48689162	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
IGDCC4	57722	hgsc.bcm.edu	36	15	63468708	63468708	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MYO9A	4649	hgsc.bcm.edu	36	15	70089831	70089831	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIAA1024	23251	hgsc.bcm.edu	36	15	77536510	77536510	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR4F6	390648	hgsc.bcm.edu	36	15	100163775	100163775	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
USP9X	8239	hgsc.bcm.edu	36	X	40875688	40875688	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KDM5C	8242	hgsc.bcm.edu	36	X	53240418	53240418	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ASB12	142689	hgsc.bcm.edu	36	X	63361903	63361903	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ARMCX1	51309	hgsc.bcm.edu	36	X	100694883	100694883	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ARMCX3	51566	hgsc.bcm.edu	36	X	100767425	100767425	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PRPS1	221823	hgsc.bcm.edu	36	X	106775140	106775140	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
VSIG1	340547	hgsc.bcm.edu	36	X	107196875	107196875	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
IL13RA2	3598	hgsc.bcm.edu	36	X	114146100	114146100	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ODZ1	10178	hgsc.bcm.edu	36	X	123345862	123345862	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FGF13	2258	hgsc.bcm.edu	36	X	137542785	137542785	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CNGA2	1260	hgsc.bcm.edu	36	X	150658777	150658777	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
F8	2157	hgsc.bcm.edu	36	X	153838449	153838449	+	Missense_Mutation	SNP	A	A	G	rs28937283	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIAA0232	9778	hgsc.bcm.edu	36	4	6913769	6913769	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PDGFRA	5156	hgsc.bcm.edu	36	4	54835794	54835794	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PDGFRA	5156	hgsc.bcm.edu	36	4	54838929	54838929	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIT	3815	hgsc.bcm.edu	36	4	55268072	55268072	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ADAMTS3	9508	hgsc.bcm.edu	36	4	73398321	73398321	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
GK2	2712	hgsc.bcm.edu	36	4	80547532	80547532	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
USP53	54532	hgsc.bcm.edu	36	4	120402446	120402446	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CLGN	4312	hgsc.bcm.edu	36	4	141541036	141541036	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ARHGAP10	79658	hgsc.bcm.edu	36	4	149019896	149019896	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MAP9	79884	hgsc.bcm.edu	36	4	156501004	156501004	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SPOCK3	50859	hgsc.bcm.edu	36	4	167949926	167949926	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ACSL1	2180	hgsc.bcm.edu	36	4	185926491	185926491	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
APOB	338	hgsc.bcm.edu	36	2	21082364	21082364	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NRXN1	9378	hgsc.bcm.edu	36	2	50609275	50609275	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BCL11A	53335	hgsc.bcm.edu	36	2	60542985	60542985	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FAM161A	84140	hgsc.bcm.edu	36	2	61920631	61920631	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MMADHC	27249	hgsc.bcm.edu	36	2	150144356	150144356	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
BAZ2B	29994	hgsc.bcm.edu	36	2	160003355	160003355	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SCN2A	6326	hgsc.bcm.edu	36	2	165880396	165880396	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PDE11A	50940	hgsc.bcm.edu	36	2	178202429	178202429	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TTN	7273	hgsc.bcm.edu	36	2	179313342	179313342	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
COL3A1	1281	hgsc.bcm.edu	36	2	189583828	189583828	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HECW2	57520	hgsc.bcm.edu	36	2	196892765	196892765	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ANKRD44	91526	hgsc.bcm.edu	36	2	197659660	197659660	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CPO	130749	hgsc.bcm.edu	36	2	207541273	207541273	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MAP2	10988	hgsc.bcm.edu	36	2	210283182	210283182	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CPS1	1589	hgsc.bcm.edu	36	2	211220848	211220848	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FAM124B	79843	hgsc.bcm.edu	36	2	224974259	224974259	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CAB39	51719	hgsc.bcm.edu	36	2	231332978	231332978	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR6B2	389090	hgsc.bcm.edu	36	2	240618376	240618376	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIF1A	547	hgsc.bcm.edu	36	2	241331058	241331058	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
JAK2	3717	hgsc.bcm.edu	36	9	5040790	5040790	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PTPRD	5789	hgsc.bcm.edu	36	9	8476142	8476142	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PTPRD	5789	hgsc.bcm.edu	36	9	8494331	8494331	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRPM6	140803	hgsc.bcm.edu	36	9	76576526	76576526	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PTCH1	5727	hgsc.bcm.edu	36	9	97281123	97281123	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PTCH1	5727	hgsc.bcm.edu	36	9	97282147	97282147	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ABCA1	19	hgsc.bcm.edu	36	9	106660715	106660715	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SCAI	0	hgsc.bcm.edu	36	9	126868125	126868125	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LAMC3	10319	hgsc.bcm.edu	36	9	132901410	132901410	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SACS	26278	hgsc.bcm.edu	36	13	22809441	22809441	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FAM123A	219287	hgsc.bcm.edu	36	13	24642369	24642369	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CDK8	1024	hgsc.bcm.edu	36	13	25876095	25876095	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FLT1	2321	hgsc.bcm.edu	36	13	27775334	27775334	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RFXAP	5994	hgsc.bcm.edu	36	13	36292093	36292093	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HTR2A	3356	hgsc.bcm.edu	36	13	46364631	46364631	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
RNF219	79596	hgsc.bcm.edu	36	13	78111083	78111083	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ABCC4	10257	hgsc.bcm.edu	36	13	94638747	94638747	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
HS6ST3	266722	hgsc.bcm.edu	36	13	96282997	96282997	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SLC10A2	6555	hgsc.bcm.edu	36	13	102499656	102499656	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NRP1	8829	hgsc.bcm.edu	36	10	33550666	33550666	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
A1CF	29974	hgsc.bcm.edu	36	10	52245936	52245936	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SLC16A9	220963	hgsc.bcm.edu	36	10	61083893	61083893	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
DUSP13	51207	hgsc.bcm.edu	36	10	76535513	76535513	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NRG3	10718	hgsc.bcm.edu	36	10	84701247	84701247	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PTEN	5728	hgsc.bcm.edu	36	10	89682843	89682843	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PTEN	5728	hgsc.bcm.edu	36	10	89707636	89707636	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LIPJ	142910	hgsc.bcm.edu	36	10	90356419	90356419	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ENTPD7	57089	hgsc.bcm.edu	36	10	101452388	101452388	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FGFR2	2263	hgsc.bcm.edu	36	10	123264794	123264794	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MKI67	4288	hgsc.bcm.edu	36	10	129795131	129795131	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NIPBL	25836	hgsc.bcm.edu	36	5	37056375	37056375	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
C5orf42	65250	hgsc.bcm.edu	36	5	37156189	37156189	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
VCAN	1462	hgsc.bcm.edu	36	5	82852060	82852060	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
GPR98	84059	hgsc.bcm.edu	36	5	90026254	90026254	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
APC	324	hgsc.bcm.edu	36	5	112144491	112144491	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
APC	324	hgsc.bcm.edu	36	5	112185570	112185570	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
APC	324	hgsc.bcm.edu	36	5	112203323	112203323	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
APC	324	hgsc.bcm.edu	36	5	112203812	112203812	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
AFF4	27125	hgsc.bcm.edu	36	5	132260604	132260604	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SLC25A48	0	hgsc.bcm.edu	36	5	135216156	135216156	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIAA0141	9812	hgsc.bcm.edu	36	5	141285239	141285239	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
SLIT3	6586	hgsc.bcm.edu	36	5	168043590	168043590	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ERGIC1	57222	hgsc.bcm.edu	36	5	172256652	172256652	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KCNQ2	3785	hgsc.bcm.edu	36	20	61530233	61530233	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PIK3R1	5295	hgsc.bcm.edu	36	5	67625420	67625420	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
LRRC41	10489	hgsc.bcm.edu	36	1	46523815	46523816	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ANKRD36B	57730	hgsc.bcm.edu	36	2	97489953	97489954	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
NKIRAS1	28512	hgsc.bcm.edu	36	3	23917406	23917407	+	In_Frame_Ins	INS	-	-	ATG	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR5K4	403278	hgsc.bcm.edu	36	3	99556282	99556282	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CCDC39	339829	hgsc.bcm.edu	36	3	181817037	181817038	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
ZNF292	23036	hgsc.bcm.edu	36	6	88025227	88025227	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TRDN	10345	hgsc.bcm.edu	36	6	123800908	123800908	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
FAM120B	84498	hgsc.bcm.edu	36	6	170469585	170469620	+	In_Frame_Del	DEL	CCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGA	CCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGA	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	CCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGA	CCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
MYC	8996	hgsc.bcm.edu	36	8	128821855	128821857	+	In_Frame_Del	DEL	TGT	TGT	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	TGT	TGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PAPPA	5069	hgsc.bcm.edu	36	9	118164806	118164807	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
KIF20B	9585	hgsc.bcm.edu	36	10	91487882	91487883	+	In_Frame_Ins	INS	-	-	TAAAAG	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
TP53	7157	hgsc.bcm.edu	36	17	7519109	7519126	+	In_Frame_Del	DEL	GCAGCGCTCATGGTGGGG	GCAGCGCTCATGGTGGGG	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	GCAGCGCTCATGGTGGGG	GCAGCGCTCATGGTGGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
PRAM1	84106	hgsc.bcm.edu	36	19	8470467	8470502	+	In_Frame_Del	DEL	CTCAGGCGGCGGGGGCTTCAAGGACACTGCACCAAA	CTCAGGCGGCGGGGGCTTCAAGGACACTGCACCAAA	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	CTCAGGCGGCGGGGGCTTCAAGGACACTGCACCAAA	CTCAGGCGGCGGGGGCTTCAAGGACACTGCACCAAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
CDC42EP1	11135	hgsc.bcm.edu	36	22	36294355	36294375	+	In_Frame_Del	DEL	CAGCGCCTGCTGCAAACCCCT	CAGCGCCTGCTGCAAACCCCT	-	novel	unknown	TCGA-A6-5660-01A-01D-1650-10	TCGA-A6-5660-10A-01D-1650-10	CAGCGCCTGCTGCAAACCCCT	CAGCGCCTGCTGCAAACCCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c3c5b27c-106b-457b-9bdf-faea907301d1	074a4b7e-62bb-453d-9925-f48de3d0ee55
