Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
ADAP1	11033	hgsc.bcm.edu	36	7	932792	932792	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR146	115330	hgsc.bcm.edu	36	7	1064023	1064023	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ELFN1	392617	hgsc.bcm.edu	36	7	1751113	1751113	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IQCE	23288	hgsc.bcm.edu	36	7	2596239	2596239	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SDK1	221935	hgsc.bcm.edu	36	7	4023334	4023334	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
THSD7A	221981	hgsc.bcm.edu	36	7	11452267	11452267	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VWDE	221806	hgsc.bcm.edu	36	7	12375793	12375793	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ETV1	2115	hgsc.bcm.edu	36	7	13945272	13945272	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MACC1	346389	hgsc.bcm.edu	36	7	20165311	20165311	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDCA7L	55536	hgsc.bcm.edu	36	7	21923007	21923007	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STK31	56164	hgsc.bcm.edu	36	7	23716436	23716436	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DFNA5	1687	hgsc.bcm.edu	36	7	24755866	24755866	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C7orf31	136895	hgsc.bcm.edu	36	7	25148898	25148898	+	Missense_Mutation	SNP	C	C	T	rs17150982	byCluster;byFrequency;byHapMap	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C7orf31	136895	hgsc.bcm.edu	36	7	25185356	25185356	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHN2	1124	hgsc.bcm.edu	36	7	29406959	29406959	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NOD1	10392	hgsc.bcm.edu	36	7	30457499	30457499	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC129	223075	hgsc.bcm.edu	36	7	31649916	31649916	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NT5C3	51251	hgsc.bcm.edu	36	7	33020965	33020965	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BMPER	168667	hgsc.bcm.edu	36	7	34061387	34061387	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NPSR1	387129	hgsc.bcm.edu	36	7	34833575	34833575	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PSMA2	5683	hgsc.bcm.edu	36	7	42930844	42930844	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POLD2	5425	hgsc.bcm.edu	36	7	44122992	44122992	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NPC1L1	29881	hgsc.bcm.edu	36	7	44545133	44545133	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADCY1	107	hgsc.bcm.edu	36	7	45709549	45709549	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ABCA13	154664	hgsc.bcm.edu	36	7	48465309	48465309	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C7orf72	0	hgsc.bcm.edu	36	7	50139894	50139894	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IKZF1	10320	hgsc.bcm.edu	36	7	50435755	50435755	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COBL	23242	hgsc.bcm.edu	36	7	51063163	51063163	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COBL	23242	hgsc.bcm.edu	36	7	51064548	51064548	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TYW1	55253	hgsc.bcm.edu	36	7	66120514	66120514	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TYW1B	441250	hgsc.bcm.edu	36	7	71719745	71719745	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BAZ1B	9031	hgsc.bcm.edu	36	7	72529924	72529924	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCL7B	9275	hgsc.bcm.edu	36	7	72595877	72595877	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLXIPL	51085	hgsc.bcm.edu	36	7	72651829	72651829	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WBSCR27	155368	hgsc.bcm.edu	36	7	72892740	72892740	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LAT2	23428	hgsc.bcm.edu	36	7	73276975	73276975	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POR	5447	hgsc.bcm.edu	36	7	75448366	75448366	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC146	57639	hgsc.bcm.edu	36	7	76634923	76634923	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FGL2	10875	hgsc.bcm.edu	36	7	76664047	76664047	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RSBN1L	222194	hgsc.bcm.edu	36	7	77245973	77245973	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAGI2	9863	hgsc.bcm.edu	36	7	77635196	77635196	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEMA3E	9723	hgsc.bcm.edu	36	7	82835064	82835064	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ABCB4	5244	hgsc.bcm.edu	36	7	86919016	86919016	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDK14	0	hgsc.bcm.edu	36	7	90214937	90214937	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AKAP9	10142	hgsc.bcm.edu	36	7	91565020	91565020	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRIT1	889	hgsc.bcm.edu	36	7	91701803	91701803	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PEX1	5189	hgsc.bcm.edu	36	7	91985410	91985410	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SAMD9	54809	hgsc.bcm.edu	36	7	92570228	92570228	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SAMD9	54809	hgsc.bcm.edu	36	7	92571684	92571684	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SAMD9	54809	hgsc.bcm.edu	36	7	92572972	92572972	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC132	55610	hgsc.bcm.edu	36	7	92764042	92764042	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PEG10	23089	hgsc.bcm.edu	36	7	94132257	94132257	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ASB4	51666	hgsc.bcm.edu	36	7	94995486	94995486	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRRAP	8295	hgsc.bcm.edu	36	7	98385288	98385288	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF498	221785	hgsc.bcm.edu	36	7	99064852	99064852	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MCM7	4176	hgsc.bcm.edu	36	7	99533753	99533753	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSC22D4	81628	hgsc.bcm.edu	36	7	99902633	99902633	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AGFG2	3268	hgsc.bcm.edu	36	7	99986066	99986066	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRCH4	4034	hgsc.bcm.edu	36	7	100021538	100021538	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GIGYF1	64599	hgsc.bcm.edu	36	7	100118924	100118924	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRRT	51593	hgsc.bcm.edu	36	7	100323661	100323661	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRIM56	81844	hgsc.bcm.edu	36	7	100519565	100519565	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRPK2	6733	hgsc.bcm.edu	36	7	104631375	104631375	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATXN7L1	222255	hgsc.bcm.edu	36	7	105042312	105042312	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIK3CG	5294	hgsc.bcm.edu	36	7	106310736	106310736	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRN3	54674	hgsc.bcm.edu	36	7	110550278	110550278	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPP1R3A	5506	hgsc.bcm.edu	36	7	113305550	113305550	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CFTR	1080	hgsc.bcm.edu	36	7	117030143	117030143	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTTNBP2	83992	hgsc.bcm.edu	36	7	117219489	117219489	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C7orf58	79974	hgsc.bcm.edu	36	7	120417040	120417040	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRZ1	5803	hgsc.bcm.edu	36	7	121440758	121440758	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAS2R16	50833	hgsc.bcm.edu	36	7	122422866	122422866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GCC1	79571	hgsc.bcm.edu	36	7	127011573	127011573	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM71F1	84691	hgsc.bcm.edu	36	7	128157293	128157293	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CALU	813	hgsc.bcm.edu	36	7	128187099	128187099	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSPAN33	340348	hgsc.bcm.edu	36	7	128594903	128594903	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MEST	4232	hgsc.bcm.edu	36	7	129925316	129925316	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MKLN1	4289	hgsc.bcm.edu	36	7	130778780	130778780	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AKR1B15	0	hgsc.bcm.edu	36	7	133911675	133911675	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM180A	389558	hgsc.bcm.edu	36	7	135072470	135072470	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHRM2	1129	hgsc.bcm.edu	36	7	136350436	136350436	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HIPK2	28996	hgsc.bcm.edu	36	7	138932032	138932032	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC37A3	84255	hgsc.bcm.edu	36	7	139692174	139692174	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BRAF	673	hgsc.bcm.edu	36	7	140099605	140099605	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRSS1	5644	hgsc.bcm.edu	36	7	142139901	142139901	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR2A2	442361	hgsc.bcm.edu	36	7	143438030	143438030	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF425	155054	hgsc.bcm.edu	36	7	148432596	148432596	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF282	8427	hgsc.bcm.edu	36	7	148526479	148526479	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF746	155061	hgsc.bcm.edu	36	7	148822328	148822328	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF862	643641	hgsc.bcm.edu	36	7	149188972	149188972	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRC61	65999	hgsc.bcm.edu	36	7	149665218	149665218	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF775	285971	hgsc.bcm.edu	36	7	149724724	149724724	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF775	285971	hgsc.bcm.edu	36	7	149725104	149725104	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GIMAP8	155038	hgsc.bcm.edu	36	7	149802262	149802262	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNH2	3757	hgsc.bcm.edu	36	7	150275649	150275649	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACCN3	9311	hgsc.bcm.edu	36	7	150378933	150378933	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC4A2	6522	hgsc.bcm.edu	36	7	150399218	150399218	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRN2	5799	hgsc.bcm.edu	36	7	157622119	157622119	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAD21L1	642636	hgsc.bcm.edu	36	20	1158605	1158605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDRGK1	65992	hgsc.bcm.edu	36	20	3123976	3123976	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC4A11	83959	hgsc.bcm.edu	36	20	3162821	3162821	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDC25B	994	hgsc.bcm.edu	36	20	3732181	3732181	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDS2	8760	hgsc.bcm.edu	36	20	5113556	5113556	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MKKS	8195	hgsc.bcm.edu	36	20	10334114	10334114	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OTOR	56914	hgsc.bcm.edu	36	20	16678581	16678581	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCSK2	5126	hgsc.bcm.edu	36	20	17410334	17410334	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF133	7692	hgsc.bcm.edu	36	20	18244642	18244642	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBBP9	10741	hgsc.bcm.edu	36	20	18419047	18419047	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC24A3	57419	hgsc.bcm.edu	36	20	19514119	19514119	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SNTA1	6640	hgsc.bcm.edu	36	20	31461630	31461630	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C20orf134	170487	hgsc.bcm.edu	36	20	31719653	31719653	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRPC4AP	26133	hgsc.bcm.edu	36	20	33055001	33055001	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C20orf117	140710	hgsc.bcm.edu	36	20	34877164	34877164	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C20orf132	140699	hgsc.bcm.edu	36	20	35181604	35181604	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM83D	81610	hgsc.bcm.edu	36	20	37004152	37004152	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM83D	81610	hgsc.bcm.edu	36	20	37014253	37014253	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHX35	60625	hgsc.bcm.edu	36	20	37068295	37068295	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LPIN3	64900	hgsc.bcm.edu	36	20	39413911	39413911	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHD6	84181	hgsc.bcm.edu	36	20	39466736	39466736	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRT	11122	hgsc.bcm.edu	36	20	40261318	40261318	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRT	11122	hgsc.bcm.edu	36	20	40261351	40261351	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRT	11122	hgsc.bcm.edu	36	20	40740155	40740155	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
L3MBTL1	26013	hgsc.bcm.edu	36	20	41576605	41576605	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SNX21	90203	hgsc.bcm.edu	36	20	43903241	43903241	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZSWIM3	140831	hgsc.bcm.edu	36	20	43940495	43940495	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZSWIM1	90204	hgsc.bcm.edu	36	20	43945869	43945869	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZSWIM1	90204	hgsc.bcm.edu	36	20	43946029	43946029	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF335	63925	hgsc.bcm.edu	36	20	44029836	44029836	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EYA2	2139	hgsc.bcm.edu	36	20	45234837	45234837	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SULF2	55959	hgsc.bcm.edu	36	20	45799041	45799041	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDX27	55661	hgsc.bcm.edu	36	20	47278669	47278669	+	Silent	SNP	C	C	T	rs238166	byCluster;byFrequency;byHapMap	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNFX1	57169	hgsc.bcm.edu	36	20	47298325	47298325	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNFX1	57169	hgsc.bcm.edu	36	20	47299470	47299470	+	Silent	SNP	G	G	A	rs34059789	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNB1	3745	hgsc.bcm.edu	36	20	47424530	47424530	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBE2V1	387522	hgsc.bcm.edu	36	20	48132755	48132755	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PARD6B	84612	hgsc.bcm.edu	36	20	48799780	48799780	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCAS4	55653	hgsc.bcm.edu	36	20	48926530	48926530	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CYP24A1	1591	hgsc.bcm.edu	36	20	52207399	52207399	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BMP7	655	hgsc.bcm.edu	36	20	55236786	55236786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCK1	5105	hgsc.bcm.edu	36	20	55571233	55571233	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCK1	5105	hgsc.bcm.edu	36	20	55571285	55571285	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF831	128611	hgsc.bcm.edu	36	20	57202056	57202056	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAF4	6874	hgsc.bcm.edu	36	20	60021354	60021354	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LSM14B	149986	hgsc.bcm.edu	36	20	60134838	60134838	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LAMA5	3911	hgsc.bcm.edu	36	20	60319456	60319456	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LAMA5	3911	hgsc.bcm.edu	36	20	60320681	60320681	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LAMA5	3911	hgsc.bcm.edu	36	20	60346999	60346999	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OGFR	11054	hgsc.bcm.edu	36	20	60914846	60914846	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTK6	5753	hgsc.bcm.edu	36	20	61638993	61638993	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZGPAT	84619	hgsc.bcm.edu	36	20	61837275	61837275	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB46	140685	hgsc.bcm.edu	36	20	61892117	61892117	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYT1	9088	hgsc.bcm.edu	36	20	62342172	62342172	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BID	637	hgsc.bcm.edu	36	22	16612875	16612875	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCARF2	91179	hgsc.bcm.edu	36	22	19116121	19116121	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PI4KA	5297	hgsc.bcm.edu	36	22	19413750	19413750	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PI4KA	5297	hgsc.bcm.edu	36	22	19428936	19428936	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CRKL	1399	hgsc.bcm.edu	36	22	19618369	19618369	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AIFM3	150209	hgsc.bcm.edu	36	22	19660018	19660018	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AIFM3	150209	hgsc.bcm.edu	36	22	19660799	19660799	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IGLL5	0	hgsc.bcm.edu	36	22	21560352	21560352	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CABIN1	23523	hgsc.bcm.edu	36	22	22897726	22897726	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CABIN1	23523	hgsc.bcm.edu	36	22	22897915	22897915	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1671	85379	hgsc.bcm.edu	36	22	23755229	23755229	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEZ6L	23544	hgsc.bcm.edu	36	22	25018760	25018760	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MN1	4330	hgsc.bcm.edu	36	22	26525490	26525490	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MN1	4330	hgsc.bcm.edu	36	22	26525561	26525561	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PITPNB	23760	hgsc.bcm.edu	36	22	26636975	26636975	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTC28	23331	hgsc.bcm.edu	36	22	26709603	26709603	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EMID1	129080	hgsc.bcm.edu	36	22	27958375	27958375	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GAS2L1	10634	hgsc.bcm.edu	36	22	28034259	28034259	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
THOC5	8563	hgsc.bcm.edu	36	22	28237126	28237126	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ASCC2	84164	hgsc.bcm.edu	36	22	28548370	28548370	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC157	550631	hgsc.bcm.edu	36	22	29100065	29100065	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTFP1	0	hgsc.bcm.edu	36	22	29153313	29153313	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMTN	6525	hgsc.bcm.edu	36	22	29821425	29821425	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PATZ1	23598	hgsc.bcm.edu	36	22	30071262	30071262	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
APOL4	80832	hgsc.bcm.edu	36	22	34917563	34917563	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SSTR3	6753	hgsc.bcm.edu	36	22	35933035	35933035	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRIOBP	11078	hgsc.bcm.edu	36	22	36483751	36483751	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRIOBP	11078	hgsc.bcm.edu	36	22	36485201	36485201	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GCAT	23464	hgsc.bcm.edu	36	22	36542549	36542549	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLA2G6	8398	hgsc.bcm.edu	36	22	36839507	36839507	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CSNK1E	1454	hgsc.bcm.edu	36	22	37020176	37020176	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SUN2	25777	hgsc.bcm.edu	36	22	37475733	37475733	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
APOBEC3H	164668	hgsc.bcm.edu	36	22	37827245	37827245	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MGAT3	346606	hgsc.bcm.edu	36	22	38213397	38213397	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ENTHD1	150350	hgsc.bcm.edu	36	22	38470133	38470133	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MKL1	57591	hgsc.bcm.edu	36	22	39144562	39144562	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACO2	50	hgsc.bcm.edu	36	22	40252393	40252393	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MEI1	150365	hgsc.bcm.edu	36	22	40471852	40471852	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEPT3	55964	hgsc.bcm.edu	36	22	40713651	40713651	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PARVG	64098	hgsc.bcm.edu	36	22	42917807	42917807	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1644	85352	hgsc.bcm.edu	36	22	43023911	43023911	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMC1B	27127	hgsc.bcm.edu	36	22	44134391	44134391	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPARA	5465	hgsc.bcm.edu	36	22	44989793	44989793	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLC1	23209	hgsc.bcm.edu	36	22	48857451	48857451	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLXNB2	23654	hgsc.bcm.edu	36	22	49061991	49061991	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLXNB2	23654	hgsc.bcm.edu	36	22	49069685	49069685	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CPT1B	1375	hgsc.bcm.edu	36	22	49356535	49356535	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CPT1B	1375	hgsc.bcm.edu	36	22	49359819	49359819	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR4M1	441670	hgsc.bcm.edu	36	14	19318621	19318621	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
APEX1	328	hgsc.bcm.edu	36	14	19995239	19995239	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PNP	5539	hgsc.bcm.edu	36	14	20013072	20013072	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHD8	57680	hgsc.bcm.edu	36	14	20933034	20933034	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SALL2	6297	hgsc.bcm.edu	36	14	21061167	21061167	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRP10	26020	hgsc.bcm.edu	36	14	22412488	22412488	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PSMB5	5693	hgsc.bcm.edu	36	14	22573925	22573925	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDH24	64403	hgsc.bcm.edu	36	14	22593599	22593599	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYH6	4624	hgsc.bcm.edu	36	14	22933191	22933191	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYH7	4625	hgsc.bcm.edu	36	14	22965067	22965067	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NFATC4	4776	hgsc.bcm.edu	36	14	23909250	23909250	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXG1	2290	hgsc.bcm.edu	36	14	28307552	28307552	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
G2E3	55632	hgsc.bcm.edu	36	14	30141062	30141062	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP5	394	hgsc.bcm.edu	36	14	31631047	31631047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP5	394	hgsc.bcm.edu	36	14	31632646	31632646	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SSTR1	6751	hgsc.bcm.edu	36	14	37748604	37748604	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTAGE5	4253	hgsc.bcm.edu	36	14	38852379	38852379	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPIL5	122769	hgsc.bcm.edu	36	14	49150889	49150889	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OTX2	5015	hgsc.bcm.edu	36	14	56338795	56338795	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC35F4	341880	hgsc.bcm.edu	36	14	57106432	57106432	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C14orf149	112849	hgsc.bcm.edu	36	14	59015779	59015779	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RTN1	6252	hgsc.bcm.edu	36	14	59282337	59282337	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C14orf135	64430	hgsc.bcm.edu	36	14	59661014	59661014	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SIX6	4990	hgsc.bcm.edu	36	14	60046407	60046407	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SIX1	6495	hgsc.bcm.edu	36	14	60185107	60185107	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNE2	23224	hgsc.bcm.edu	36	14	63533590	63533590	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNE2	23224	hgsc.bcm.edu	36	14	63666698	63666698	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HSPA2	3306	hgsc.bcm.edu	36	14	64077486	64077486	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C14orf50	145376	hgsc.bcm.edu	36	14	64101886	64101886	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC8A3	6547	hgsc.bcm.edu	36	14	69582717	69582717	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP3K9	4293	hgsc.bcm.edu	36	14	70297508	70297508	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SIPA1L1	26037	hgsc.bcm.edu	36	14	71266700	71266700	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DPF3	8110	hgsc.bcm.edu	36	14	72250893	72250893	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PROX2	283571	hgsc.bcm.edu	36	14	74391695	74391695	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTLL5	254173	hgsc.bcm.edu	36	14	75418859	75418859	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NRXN3	9369	hgsc.bcm.edu	36	14	78816406	78816406	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEL1L	6400	hgsc.bcm.edu	36	14	81034516	81034516	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBR7	55148	hgsc.bcm.edu	36	14	92754662	92754662	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1409	57578	hgsc.bcm.edu	36	14	93222744	93222744	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SERPINA10	51156	hgsc.bcm.edu	36	14	93826114	93826114	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SERPINA11	327657	hgsc.bcm.edu	36	14	93984661	93984661	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATG2B	55102	hgsc.bcm.edu	36	14	95877649	95877649	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C14orf177	283598	hgsc.bcm.edu	36	14	98253191	98253191	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EML1	2009	hgsc.bcm.edu	36	14	99476098	99476098	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RTL1	388015	hgsc.bcm.edu	36	14	100417571	100417571	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPP2R5C	5527	hgsc.bcm.edu	36	14	101461353	101461353	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C14orf73	91828	hgsc.bcm.edu	36	14	102646121	102646121	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TDRD9	122402	hgsc.bcm.edu	36	14	103501499	103501499	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF26A	26153	hgsc.bcm.edu	36	14	103708667	103708667	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AKT1	207	hgsc.bcm.edu	36	14	104314134	104314134	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDCA4	55038	hgsc.bcm.edu	36	14	104549029	104549029	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDCA4	55038	hgsc.bcm.edu	36	14	104549030	104549030	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
JAG2	3714	hgsc.bcm.edu	36	14	104693201	104693201	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BTBD6	90135	hgsc.bcm.edu	36	14	104787335	104787335	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C14orf80	283643	hgsc.bcm.edu	36	14	105036036	105036036	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPAP2C	8612	hgsc.bcm.edu	36	19	239137	239137	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C19orf20	91978	hgsc.bcm.edu	36	19	469973	469973	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARID3A	1820	hgsc.bcm.edu	36	19	922952	922952	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNN2	1265	hgsc.bcm.edu	36	19	988863	988863	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ABCA7	10347	hgsc.bcm.edu	36	19	1004517	1004517	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HMHA1	23526	hgsc.bcm.edu	36	19	1024569	1024569	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STK11	6794	hgsc.bcm.edu	36	19	1157913	1157913	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DAZAP1	26528	hgsc.bcm.edu	36	19	1385803	1385803	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP8B3	148229	hgsc.bcm.edu	36	19	1751363	1751363	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCAMP4	113178	hgsc.bcm.edu	36	19	1869145	1869145	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF77	58492	hgsc.bcm.edu	36	19	2884621	2884621	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBXA2R	6915	hgsc.bcm.edu	36	19	3551429	3551429	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C19orf29	58509	hgsc.bcm.edu	36	19	3564158	3564158	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB7A	51341	hgsc.bcm.edu	36	19	4005814	4005814	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEMA6B	10501	hgsc.bcm.edu	36	19	4495428	4495428	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRS	5802	hgsc.bcm.edu	36	19	5195068	5195068	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RFX2	5990	hgsc.bcm.edu	36	19	5998439	5998439	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLLT1	4298	hgsc.bcm.edu	36	19	6213287	6213287	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EMR1	2015	hgsc.bcm.edu	36	19	6867351	6867351	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
INSR	3643	hgsc.bcm.edu	36	19	7094009	7094009	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGEF18	23370	hgsc.bcm.edu	36	19	7410999	7410999	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
XAB2	56949	hgsc.bcm.edu	36	19	7594684	7594684	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STXBP2	6813	hgsc.bcm.edu	36	19	7618333	7618333	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TIMM44	10469	hgsc.bcm.edu	36	19	7903804	7903804	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRAM1	84106	hgsc.bcm.edu	36	19	8469816	8469816	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRAM1	84106	hgsc.bcm.edu	36	19	8469992	8469992	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACTL9	284382	hgsc.bcm.edu	36	19	8669195	8669195	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF558	148156	hgsc.bcm.edu	36	19	8793718	8793718	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC16	94025	hgsc.bcm.edu	36	19	8925066	8925066	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC16	94025	hgsc.bcm.edu	36	19	8929355	8929355	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF266	10781	hgsc.bcm.edu	36	19	9384994	9384994	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNMT1	1786	hgsc.bcm.edu	36	19	10126586	10126586	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNMT1	1786	hgsc.bcm.edu	36	19	10138310	10138310	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ICAM5	7087	hgsc.bcm.edu	36	19	10263738	10263738	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDE4A	5141	hgsc.bcm.edu	36	19	10429599	10429599	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATG4D	84971	hgsc.bcm.edu	36	19	10523797	10523797	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRI1	65095	hgsc.bcm.edu	36	19	10531498	10531498	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ILF3	3609	hgsc.bcm.edu	36	19	10652928	10652928	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMED1	11018	hgsc.bcm.edu	36	19	10804830	10804830	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMARCA4	6597	hgsc.bcm.edu	36	19	11005479	11005479	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRKCSH	5589	hgsc.bcm.edu	36	19	11419373	11419373	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF653	115950	hgsc.bcm.edu	36	19	11458870	11458870	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF441	126068	hgsc.bcm.edu	36	19	11753027	11753027	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAN2B1	4125	hgsc.bcm.edu	36	19	12621799	12621799	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FARSA	2193	hgsc.bcm.edu	36	19	12894672	12894672	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LYL1	4066	hgsc.bcm.edu	36	19	13071475	13071475	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CACNA1A	773	hgsc.bcm.edu	36	19	13270967	13270967	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CACNA1A	773	hgsc.bcm.edu	36	19	13477836	13477836	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C19orf53	28974	hgsc.bcm.edu	36	19	13749898	13749898	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RFX1	5989	hgsc.bcm.edu	36	19	13937470	13937470	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CD97	976	hgsc.bcm.edu	36	19	14368979	14368979	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC1A6	6511	hgsc.bcm.edu	36	19	14928364	14928364	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C19orf44	84167	hgsc.bcm.edu	36	19	16486337	16486337	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHERP	10523	hgsc.bcm.edu	36	19	16493450	16493450	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USHBP1	83878	hgsc.bcm.edu	36	19	17231101	17231101	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLVAP	83483	hgsc.bcm.edu	36	19	17337531	17337531	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM129C	199786	hgsc.bcm.edu	36	19	17504167	17504167	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FCHO1	23149	hgsc.bcm.edu	36	19	17754964	17754964	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL12RB1	3594	hgsc.bcm.edu	36	19	18035732	18035732	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1683	80726	hgsc.bcm.edu	36	19	18238717	18238717	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GDF15	9518	hgsc.bcm.edu	36	19	18360511	18360511	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHL26	55295	hgsc.bcm.edu	36	19	18636147	18636147	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAU2	0	hgsc.bcm.edu	36	19	19314376	19314376	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GMIP	51291	hgsc.bcm.edu	36	19	19606851	19606851	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF626	199777	hgsc.bcm.edu	36	19	20599991	20599991	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF431	170959	hgsc.bcm.edu	36	19	21157415	21157415	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF431	170959	hgsc.bcm.edu	36	19	21157421	21157421	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF431	170959	hgsc.bcm.edu	36	19	21157435	21157435	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF208	7757	hgsc.bcm.edu	36	19	21946316	21946316	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF257	113835	hgsc.bcm.edu	36	19	22048177	22048177	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF98	148198	hgsc.bcm.edu	36	19	22366308	22366308	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POP4	10775	hgsc.bcm.edu	36	19	34798115	34798115	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSHZ3	57616	hgsc.bcm.edu	36	19	36461244	36461244	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DPY19L3	147991	hgsc.bcm.edu	36	19	37641232	37641232	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD27	84079	hgsc.bcm.edu	36	19	37780934	37780934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPATCH1	55094	hgsc.bcm.edu	36	19	38307857	38307857	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDCD2L	84306	hgsc.bcm.edu	36	19	39591948	39591948	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRAMD1A	57655	hgsc.bcm.edu	36	19	40193110	40193110	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLL4	9757	hgsc.bcm.edu	36	19	40902630	40902630	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
APLP1	333	hgsc.bcm.edu	36	19	41054091	41054091	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF345	25850	hgsc.bcm.edu	36	19	42060164	42060164	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF607	84775	hgsc.bcm.edu	36	19	42881130	42881130	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CATSPERG	0	hgsc.bcm.edu	36	19	43550615	43550615	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RYR1	6261	hgsc.bcm.edu	36	19	43643045	43643045	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RYR1	6261	hgsc.bcm.edu	36	19	43646001	43646001	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RYR1	6261	hgsc.bcm.edu	36	19	43754618	43754618	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACTN4	81	hgsc.bcm.edu	36	19	43911567	43911567	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LGALS4	3960	hgsc.bcm.edu	36	19	43984850	43984850	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PAF1	54623	hgsc.bcm.edu	36	19	44571614	44571614	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TIMM50	92609	hgsc.bcm.edu	36	19	44672212	44672212	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF546	339327	hgsc.bcm.edu	36	19	45213043	45213043	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHKBP1	92799	hgsc.bcm.edu	36	19	45778633	45778633	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CYP2F1	1572	hgsc.bcm.edu	36	19	46319262	46319262	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERF	2107	hgsc.bcm.edu	36	19	47445488	47445488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNFN	84518	hgsc.bcm.edu	36	19	47584985	47584985	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LIPE	3991	hgsc.bcm.edu	36	19	47622575	47622575	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF284	342909	hgsc.bcm.edu	36	19	49281857	49281857	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFP112	7771	hgsc.bcm.edu	36	19	49525040	49525040	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF229	7772	hgsc.bcm.edu	36	19	49625459	49625459	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLASRP	0	hgsc.bcm.edu	36	19	50259169	50259169	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPP1R13L	10848	hgsc.bcm.edu	36	19	50580809	50580809	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RSPH6A	0	hgsc.bcm.edu	36	19	50999397	50999397	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYPOP	339344	hgsc.bcm.edu	36	19	51096674	51096674	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYPOP	339344	hgsc.bcm.edu	36	19	51096715	51096715	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NOVA2	4858	hgsc.bcm.edu	36	19	51135083	51135083	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NOVA2	4858	hgsc.bcm.edu	36	19	51135990	51135990	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRKD2	25865	hgsc.bcm.edu	36	19	51870176	51870176	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHX34	9704	hgsc.bcm.edu	36	19	52571546	52571546	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LIG1	26018	hgsc.bcm.edu	36	19	53348953	53348953	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIH1D1	55011	hgsc.bcm.edu	36	19	54641473	54641473	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSKS	60385	hgsc.bcm.edu	36	19	54940380	54940380	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL4I1	259307	hgsc.bcm.edu	36	19	55091053	55091053	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYH14	79784	hgsc.bcm.edu	36	19	55405645	55405645	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYBPC2	4606	hgsc.bcm.edu	36	19	55650330	55650330	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHANK1	50944	hgsc.bcm.edu	36	19	55862026	55862026	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHANK1	50944	hgsc.bcm.edu	36	19	55898698	55898698	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHANK1	50944	hgsc.bcm.edu	36	19	55908967	55908967	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR32	2854	hgsc.bcm.edu	36	19	55966707	55966707	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NKG7	4818	hgsc.bcm.edu	36	19	56567099	56567099	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF83	55769	hgsc.bcm.edu	36	19	57809457	57809457	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF677	342926	hgsc.bcm.edu	36	19	58432996	58432996	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NLRP12	91662	hgsc.bcm.edu	36	19	59000453	59000453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LILRB3	79168	hgsc.bcm.edu	36	19	59418066	59418066	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NLRP2	55655	hgsc.bcm.edu	36	19	60186016	60186016	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GP6	51206	hgsc.bcm.edu	36	19	60230956	60230956	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPS8L1	54869	hgsc.bcm.edu	36	19	60285046	60285046	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BRSK1	84446	hgsc.bcm.edu	36	19	60504731	60504731	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PEG3	5178	hgsc.bcm.edu	36	19	62017184	62017184	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PEG3	5178	hgsc.bcm.edu	36	19	62027669	62027669	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF8	7554	hgsc.bcm.edu	36	19	63497701	63497701	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZSCAN22	342945	hgsc.bcm.edu	36	19	63538147	63538147	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF584	201514	hgsc.bcm.edu	36	19	63620463	63620463	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF324	25799	hgsc.bcm.edu	36	19	63672444	63672444	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC27A5	10998	hgsc.bcm.edu	36	19	63715053	63715053	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBE2M	9040	hgsc.bcm.edu	36	19	63761511	63761511	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERICH1	157697	hgsc.bcm.edu	36	8	655934	655934	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLN8	2055	hgsc.bcm.edu	36	8	1706989	1706989	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNKS	8658	hgsc.bcm.edu	36	8	9451484	9451484	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTMR7	9108	hgsc.bcm.edu	36	8	17273010	17273010	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIWIL2	55124	hgsc.bcm.edu	36	8	22268943	22268943	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC39A14	23516	hgsc.bcm.edu	36	8	22323537	22323537	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC39A14	23516	hgsc.bcm.edu	36	8	22333156	22333156	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAM28	10863	hgsc.bcm.edu	36	8	24255118	24255118	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NEFM	4741	hgsc.bcm.edu	36	8	24827967	24827967	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDCA2	157313	hgsc.bcm.edu	36	8	25420770	25420770	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PNMA2	10687	hgsc.bcm.edu	36	8	26421119	26421119	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHRNA2	1135	hgsc.bcm.edu	36	8	27376547	27376547	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MBOAT4	619373	hgsc.bcm.edu	36	8	30109523	30109523	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TEX15	56154	hgsc.bcm.edu	36	8	30823652	30823652	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TM2D2	83877	hgsc.bcm.edu	36	8	38972110	38972110	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GINS4	84296	hgsc.bcm.edu	36	8	41516628	41516628	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANK1	286	hgsc.bcm.edu	36	8	41682879	41682879	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHD7	55636	hgsc.bcm.edu	36	8	61928190	61928190	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDE7A	5150	hgsc.bcm.edu	36	8	66814330	66814330	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYBL1	4603	hgsc.bcm.edu	36	8	67641494	67641494	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARFGEF1	10565	hgsc.bcm.edu	36	8	68366670	68366670	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CPA6	57094	hgsc.bcm.edu	36	8	68592775	68592775	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SULF1	23213	hgsc.bcm.edu	36	8	70695882	70695882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
JPH1	56704	hgsc.bcm.edu	36	8	75312048	75312048	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
JPH1	56704	hgsc.bcm.edu	36	8	75395801	75395801	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PKIA	5569	hgsc.bcm.edu	36	8	79676562	79676562	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CA3	761	hgsc.bcm.edu	36	8	86543572	86543572	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CPNE3	8895	hgsc.bcm.edu	36	8	87629099	87629099	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DCAF4L2	0	hgsc.bcm.edu	36	8	88954200	88954200	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NBN	9048	hgsc.bcm.edu	36	8	91036788	91036788	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBM12B	389677	hgsc.bcm.edu	36	8	94815906	94815906	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM67	91147	hgsc.bcm.edu	36	8	94866709	94866709	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1429	25962	hgsc.bcm.edu	36	8	95608283	95608283	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSPYL5	85453	hgsc.bcm.edu	36	8	98358638	98358638	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VPS13B	157680	hgsc.bcm.edu	36	8	100184489	100184489	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OXR1	55074	hgsc.bcm.edu	36	8	107600478	107600478	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CSMD3	114788	hgsc.bcm.edu	36	8	113372974	113372974	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CSMD3	114788	hgsc.bcm.edu	36	8	113392467	113392467	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CSMD3	114788	hgsc.bcm.edu	36	8	113488120	113488120	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRPS1	7227	hgsc.bcm.edu	36	8	116496483	116496483	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAD21	5885	hgsc.bcm.edu	36	8	117932180	117932180	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAD21	5885	hgsc.bcm.edu	36	8	117937673	117937673	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C8orf85	441376	hgsc.bcm.edu	36	8	118019814	118019814	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZHX2	22882	hgsc.bcm.edu	36	8	124034748	124034748	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FER1L6	654463	hgsc.bcm.edu	36	8	125142130	125142130	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTSS1	9788	hgsc.bcm.edu	36	8	125634878	125634878	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM84B	157638	hgsc.bcm.edu	36	8	127638670	127638670	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EFR3A	23167	hgsc.bcm.edu	36	8	133065726	133065726	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TG	7038	hgsc.bcm.edu	36	8	133968706	133968706	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR20	2843	hgsc.bcm.edu	36	8	142437186	142437186	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARC	23237	hgsc.bcm.edu	36	8	143691703	143691703	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LY6H	4062	hgsc.bcm.edu	36	8	144311090	144311090	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF707	286075	hgsc.bcm.edu	36	8	144847896	144847896	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAPK15	225689	hgsc.bcm.edu	36	8	144872405	144872405	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM83H	286077	hgsc.bcm.edu	36	8	144880292	144880292	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLEC	0	hgsc.bcm.edu	36	8	145069116	145069116	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OPLAH	26873	hgsc.bcm.edu	36	8	145179128	145179128	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPT	2875	hgsc.bcm.edu	36	8	145701498	145701498	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RECQL4	9401	hgsc.bcm.edu	36	8	145712187	145712187	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP39	0	hgsc.bcm.edu	36	8	145729500	145729500	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP39	0	hgsc.bcm.edu	36	8	145730378	145730378	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AGRN	375790	hgsc.bcm.edu	36	1	979740	979740	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNFRSF4	7293	hgsc.bcm.edu	36	1	1138973	1138973	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C1orf70	339453	hgsc.bcm.edu	36	1	1460889	1460889	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NADK	65220	hgsc.bcm.edu	36	1	1675414	1675414	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNFRSF25	8718	hgsc.bcm.edu	36	1	6444715	6444715	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHL21	9903	hgsc.bcm.edu	36	1	6576281	6576281	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CAMTA1	23261	hgsc.bcm.edu	36	1	7715242	7715242	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CAMTA1	23261	hgsc.bcm.edu	36	1	7720669	7720669	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RERE	473	hgsc.bcm.edu	36	1	8342441	8342441	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RERE	473	hgsc.bcm.edu	36	1	8342447	8342447	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
H6PD	9563	hgsc.bcm.edu	36	1	9246861	9246861	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF1B	23095	hgsc.bcm.edu	36	1	10287101	10287101	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRDM2	7799	hgsc.bcm.edu	36	1	13930153	13930153	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRDM2	7799	hgsc.bcm.edu	36	1	13979760	13979760	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTRC	11330	hgsc.bcm.edu	36	1	15642503	15642503	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPEN	64783	hgsc.bcm.edu	36	1	16127478	16127478	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLCNKA	1187	hgsc.bcm.edu	36	1	16227848	16227848	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLCNKA	1187	hgsc.bcm.edu	36	1	16229138	16229138	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLCNKA	1187	hgsc.bcm.edu	36	1	16229564	16229564	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CROCC	9696	hgsc.bcm.edu	36	1	17123514	17123514	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CROCC	9696	hgsc.bcm.edu	36	1	17129654	17129654	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGEF10L	55160	hgsc.bcm.edu	36	1	17801241	17801241	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAS1R2	80834	hgsc.bcm.edu	36	1	19040867	19040867	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF186	54546	hgsc.bcm.edu	36	1	20014164	20014164	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLA2G2C	391013	hgsc.bcm.edu	36	1	20374174	20374174	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALPL	249	hgsc.bcm.edu	36	1	21762273	21762273	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HSPG2	3339	hgsc.bcm.edu	36	1	22033777	22033777	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HSPG2	3339	hgsc.bcm.edu	36	1	22075441	22075441	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KDM1A	0	hgsc.bcm.edu	36	1	23267690	23267690	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LUZP1	7798	hgsc.bcm.edu	36	1	23292589	23292589	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRSF10	0	hgsc.bcm.edu	36	1	24170384	24170384	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRSF10	0	hgsc.bcm.edu	36	1	24177867	24177867	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRRM1	10250	hgsc.bcm.edu	36	1	24869272	24869272	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RHD	6007	hgsc.bcm.edu	36	1	25489789	25489789	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEPN1	57190	hgsc.bcm.edu	36	1	26008823	26008823	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHDDS	79947	hgsc.bcm.edu	36	1	26637322	26637322	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARID1A	8289	hgsc.bcm.edu	36	1	26961310	26961310	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP3K6	9064	hgsc.bcm.edu	36	1	27558532	27558532	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMPDL3B	27293	hgsc.bcm.edu	36	1	28157720	28157720	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OPRD1	4985	hgsc.bcm.edu	36	1	29062218	29062218	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MECR	51102	hgsc.bcm.edu	36	1	29415725	29415725	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL16A1	1307	hgsc.bcm.edu	36	1	31893572	31893572	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL16A1	1307	hgsc.bcm.edu	36	1	31910647	31910647	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BAI2	576	hgsc.bcm.edu	36	1	31982919	31982919	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0319L	79932	hgsc.bcm.edu	36	1	35688650	35688650	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
THRAP3	9967	hgsc.bcm.edu	36	1	36524684	36524684	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LSM10	84967	hgsc.bcm.edu	36	1	36632080	36632080	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SNIP1	79753	hgsc.bcm.edu	36	1	37778499	37778499	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MACF1	23499	hgsc.bcm.edu	36	1	39549110	39549110	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0754	643314	hgsc.bcm.edu	36	1	39651896	39651896	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MACF1	23499	hgsc.bcm.edu	36	1	39706953	39706953	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PABPC4	8761	hgsc.bcm.edu	36	1	39814105	39814105	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BMP8B	656	hgsc.bcm.edu	36	1	39998693	39998693	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MFSD2A	0	hgsc.bcm.edu	36	1	40205122	40205122	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTPS	1503	hgsc.bcm.edu	36	1	41239347	41239347	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0467	23334	hgsc.bcm.edu	36	1	43686349	43686349	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0467	23334	hgsc.bcm.edu	36	1	43688633	43688633	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRF	5792	hgsc.bcm.edu	36	1	43856987	43856987	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NASP	4678	hgsc.bcm.edu	36	1	45855791	45855791	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NASP	4678	hgsc.bcm.edu	36	1	45855831	45855831	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OSBPL9	114883	hgsc.bcm.edu	36	1	52010933	52010933	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NRD1	4898	hgsc.bcm.edu	36	1	52028863	52028863	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFYVE9	9372	hgsc.bcm.edu	36	1	52477296	52477296	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C1orf177	163747	hgsc.bcm.edu	36	1	55045889	55045889	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM61	199964	hgsc.bcm.edu	36	1	55230242	55230242	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM61	199964	hgsc.bcm.edu	36	1	55230351	55230351	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
L1TD1	54596	hgsc.bcm.edu	36	1	62445144	62445144	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LEPR	54741	hgsc.bcm.edu	36	1	65809073	65809073	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRSF11	0	hgsc.bcm.edu	36	1	70460049	70460049	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C1orf173	127254	hgsc.bcm.edu	36	1	74809954	74809954	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC44A5	204962	hgsc.bcm.edu	36	1	75460646	75460646	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTLL7	79739	hgsc.bcm.edu	36	1	84167460	84167460	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SSX2IP	117178	hgsc.bcm.edu	36	1	84894246	84894246	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYDE2	84144	hgsc.bcm.edu	36	1	85421342	85421342	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLCA1	1179	hgsc.bcm.edu	36	1	86732526	86732526	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF326	284695	hgsc.bcm.edu	36	1	90245689	90245689	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HFM1	164045	hgsc.bcm.edu	36	1	91585609	91585609	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GLMN	11146	hgsc.bcm.edu	36	1	92486048	92486048	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP29	9411	hgsc.bcm.edu	36	1	94412835	94412835	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTBP2	58155	hgsc.bcm.edu	36	1	97050988	97050988	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LPPR5	0	hgsc.bcm.edu	36	1	99242639	99242639	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LPPR5	0	hgsc.bcm.edu	36	1	99242736	99242736	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LPPR4	9890	hgsc.bcm.edu	36	1	99537250	99537250	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL11A1	1301	hgsc.bcm.edu	36	1	103117948	103117948	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL11A1	1301	hgsc.bcm.edu	36	1	103246654	103246654	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CELSR2	1952	hgsc.bcm.edu	36	1	109614618	109614618	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR61	83873	hgsc.bcm.edu	36	1	109887262	109887262	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC6A17	388662	hgsc.bcm.edu	36	1	110541625	110541625	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MOV10	4343	hgsc.bcm.edu	36	1	113036912	113036912	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OLFML3	56944	hgsc.bcm.edu	36	1	114323730	114323730	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DENND2C	163259	hgsc.bcm.edu	36	1	114969811	114969811	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CD2	914	hgsc.bcm.edu	36	1	117104663	117104663	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CD2	914	hgsc.bcm.edu	36	1	117104675	117104675	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDE4DIP	9659	hgsc.bcm.edu	36	1	143565921	143565921	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD34A	284615	hgsc.bcm.edu	36	1	144184956	144184956	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD35	148741	hgsc.bcm.edu	36	1	144260682	144260682	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SV2A	9900	hgsc.bcm.edu	36	1	148150050	148150050	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANXA9	8416	hgsc.bcm.edu	36	1	149222445	149222445	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEMA6C	10500	hgsc.bcm.edu	36	1	149374786	149374786	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNFAIP8L2	79626	hgsc.bcm.edu	36	1	149398267	149398267	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RFX5	5993	hgsc.bcm.edu	36	1	149581554	149581554	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POGZ	23126	hgsc.bcm.edu	36	1	149644676	149644676	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TCHH	7062	hgsc.bcm.edu	36	1	150352114	150352114	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HRNR	388697	hgsc.bcm.edu	36	1	150459092	150459092	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FLG	2312	hgsc.bcm.edu	36	1	150541849	150541849	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DENND4B	9909	hgsc.bcm.edu	36	1	152180332	152180332	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBE2Q1	55585	hgsc.bcm.edu	36	1	152797387	152797387	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHRNB2	1141	hgsc.bcm.edu	36	1	152810907	152810907	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNN3	3782	hgsc.bcm.edu	36	1	153108434	153108434	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNN3	3782	hgsc.bcm.edu	36	1	153108969	153108969	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB7B	51043	hgsc.bcm.edu	36	1	153254778	153254778	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB7B	51043	hgsc.bcm.edu	36	1	153254897	153254897	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ASH1L	55870	hgsc.bcm.edu	36	1	153715525	153715525	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MSTO1	55154	hgsc.bcm.edu	36	1	153849604	153849604	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM79	84283	hgsc.bcm.edu	36	1	154522209	154522209	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HAPLN2	60484	hgsc.bcm.edu	36	1	154861547	154861547	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C1orf92	149499	hgsc.bcm.edu	36	1	155168375	155168375	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FCRL2	127943	hgsc.bcm.edu	36	1	155985357	155985357	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR10T2	128360	hgsc.bcm.edu	36	1	156635166	156635166	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR10K1	391109	hgsc.bcm.edu	36	1	156702477	156702477	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPTA1	6708	hgsc.bcm.edu	36	1	156899227	156899227	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPTA1	6708	hgsc.bcm.edu	36	1	156921686	156921686	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLAMF1	6504	hgsc.bcm.edu	36	1	158873824	158873824	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LY9	4063	hgsc.bcm.edu	36	1	159038227	159038227	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP30	257106	hgsc.bcm.edu	36	1	159296064	159296064	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HSPA6	3310	hgsc.bcm.edu	36	1	159761502	159761502	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UAP1	6675	hgsc.bcm.edu	36	1	160835707	160835707	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UCK2	7371	hgsc.bcm.edu	36	1	164143562	164143562	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POGK	57645	hgsc.bcm.edu	36	1	165085995	165085995	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAEL	84944	hgsc.bcm.edu	36	1	165225229	165225229	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RCSD1	92241	hgsc.bcm.edu	36	1	165933559	165933559	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBX19	9095	hgsc.bcm.edu	36	1	166548795	166548795	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCYL3	57147	hgsc.bcm.edu	36	1	168090293	168090293	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNM3	26052	hgsc.bcm.edu	36	1	170268221	170268221	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHL20	27252	hgsc.bcm.edu	36	1	172010117	172010117	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DARS2	55157	hgsc.bcm.edu	36	1	172089177	172089177	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNN	63923	hgsc.bcm.edu	36	1	173334146	173334146	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CEP350	9857	hgsc.bcm.edu	36	1	178250178	178250178	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGSL1	353299	hgsc.bcm.edu	36	1	180709496	180709496	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHX9	1660	hgsc.bcm.edu	36	1	181120516	181120516	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMG7	9887	hgsc.bcm.edu	36	1	181762443	181762443	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCF2	4688	hgsc.bcm.edu	36	1	181822714	181822714	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HMCN1	83872	hgsc.bcm.edu	36	1	184323385	184323385	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TPR	7175	hgsc.bcm.edu	36	1	184572768	184572768	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTGS2	5743	hgsc.bcm.edu	36	1	184910185	184910185	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNT2	343450	hgsc.bcm.edu	36	1	194576173	194576173	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CRB1	23418	hgsc.bcm.edu	36	1	195657051	195657051	+	Silent	SNP	C	C	T	rs35193230	byFrequency	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DENND1B	163486	hgsc.bcm.edu	36	1	196008683	196008683	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NEK7	140609	hgsc.bcm.edu	36	1	196498378	196498378	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM58B	339521	hgsc.bcm.edu	36	1	198449456	198449456	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C1orf106	55765	hgsc.bcm.edu	36	1	199145060	199145060	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PKP1	5317	hgsc.bcm.edu	36	1	199549113	199549113	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NAV1	89796	hgsc.bcm.edu	36	1	200048225	200048225	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IPO9	55705	hgsc.bcm.edu	36	1	200090379	200090379	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LMOD1	25802	hgsc.bcm.edu	36	1	200135716	200135716	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM183B	653659	hgsc.bcm.edu	36	1	201244517	201244517	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNTN2	6900	hgsc.bcm.edu	36	1	203298295	203298295	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RASSF5	283349	hgsc.bcm.edu	36	1	204824498	204824498	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CR1	1378	hgsc.bcm.edu	36	1	205849572	205849572	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLXNA2	5362	hgsc.bcm.edu	36	1	206319237	206319237	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USH2A	7399	hgsc.bcm.edu	36	1	214439681	214439681	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPATA17	128153	hgsc.bcm.edu	36	1	215923235	215923235	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LIN9	286826	hgsc.bcm.edu	36	1	224520645	224520645	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITPKB	3707	hgsc.bcm.edu	36	1	224990333	224990333	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDC42BPA	8476	hgsc.bcm.edu	36	1	225328588	225328588	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OBSCN	84033	hgsc.bcm.edu	36	1	226626097	226626097	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OBSCN	84033	hgsc.bcm.edu	36	1	226627041	226627041	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OBSCN	84033	hgsc.bcm.edu	36	1	226631176	226631176	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AGT	189	hgsc.bcm.edu	36	1	228912808	228912808	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARV1	64801	hgsc.bcm.edu	36	1	229199508	229199508	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C1orf131	128061	hgsc.bcm.edu	36	1	229441400	229441400	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCNXL2	80003	hgsc.bcm.edu	36	1	231201734	231201734	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC35F3	148641	hgsc.bcm.edu	36	1	232433916	232433916	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RYR2	6262	hgsc.bcm.edu	36	1	235821742	235821742	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RYR2	6262	hgsc.bcm.edu	36	1	236062529	236062529	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHML	1122	hgsc.bcm.edu	36	1	239864152	239864152	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CEP170	9859	hgsc.bcm.edu	36	1	241386300	241386300	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF26B	55083	hgsc.bcm.edu	36	1	243917378	243917378	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TFB2M	64216	hgsc.bcm.edu	36	1	244786529	244786529	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VN1R5	317705	hgsc.bcm.edu	36	1	245486934	245486934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF496	84838	hgsc.bcm.edu	36	1	245559197	245559197	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NLRP3	114548	hgsc.bcm.edu	36	1	245654538	245654538	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR2M4	26245	hgsc.bcm.edu	36	1	246469468	246469468	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR2T33	391195	hgsc.bcm.edu	36	1	246503322	246503322	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRC56	115399	hgsc.bcm.edu	36	11	541727	541727	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RASSF7	8045	hgsc.bcm.edu	36	11	552380	552380	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRDD	55367	hgsc.bcm.edu	36	11	794181	794181	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC6	4588	hgsc.bcm.edu	36	11	1006173	1006173	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC6	4588	hgsc.bcm.edu	36	11	1007539	1007539	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC6	4588	hgsc.bcm.edu	36	11	1026632	1026632	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC5B	727897	hgsc.bcm.edu	36	11	1220796	1220796	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC5B	727897	hgsc.bcm.edu	36	11	1227417	1227417	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TOLLIP	54472	hgsc.bcm.edu	36	11	1268074	1268074	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRTAP5-5	440051	hgsc.bcm.edu	36	11	1607766	1607766	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNNI2	7136	hgsc.bcm.edu	36	11	1819275	1819275	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR52K1	390036	hgsc.bcm.edu	36	11	4467362	4467362	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR51E1	143503	hgsc.bcm.edu	36	11	4631140	4631140	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR56B1	387748	hgsc.bcm.edu	36	11	5714714	5714714	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR56A4	120793	hgsc.bcm.edu	36	11	5980107	5980107	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMPD1	6609	hgsc.bcm.edu	36	11	6369908	6369908	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADM	133	hgsc.bcm.edu	36	11	10284644	10284644	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP47	55031	hgsc.bcm.edu	36	11	11820320	11820320	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MICAL2	9645	hgsc.bcm.edu	36	11	12191505	12191505	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTH	5741	hgsc.bcm.edu	36	11	13470632	13470632	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COPB1	1315	hgsc.bcm.edu	36	11	14444423	14444423	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USH1C	10083	hgsc.bcm.edu	36	11	17509304	17509304	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GTF2H1	2965	hgsc.bcm.edu	36	11	18319420	18319420	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PAX6	5080	hgsc.bcm.edu	36	11	31772761	31772761	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CAPRIN1	4076	hgsc.bcm.edu	36	11	34068372	34068372	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
API5	8539	hgsc.bcm.edu	36	11	43320597	43320597	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACCS	84680	hgsc.bcm.edu	36	11	44053678	44053678	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC35C1	55343	hgsc.bcm.edu	36	11	45784122	45784122	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AMBRA1	55626	hgsc.bcm.edu	36	11	46521515	46521515	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYBPC3	4607	hgsc.bcm.edu	36	11	47328686	47328686	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NDUFS3	4722	hgsc.bcm.edu	36	11	47558733	47558733	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR4C3	256144	hgsc.bcm.edu	36	11	48303587	48303587	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR4P4	81300	hgsc.bcm.edu	36	11	55163161	55163161	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR5D14	219436	hgsc.bcm.edu	36	11	55319966	55319966	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR5L2	26338	hgsc.bcm.edu	36	11	55351445	55351445	+	Missense_Mutation	SNP	G	G	A	rs56711116	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR5AS1	219447	hgsc.bcm.edu	36	11	55555115	55555115	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR5T3	390154	hgsc.bcm.edu	36	11	55776843	55776843	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR5M9	390162	hgsc.bcm.edu	36	11	55987252	55987252	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNKS1BP1	85456	hgsc.bcm.edu	36	11	56833750	56833750	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR6Q1	219952	hgsc.bcm.edu	36	11	57555675	57555675	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM111B	374393	hgsc.bcm.edu	36	11	58648474	58648474	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MS4A5	64232	hgsc.bcm.edu	36	11	59954908	59954908	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MS4A10	341116	hgsc.bcm.edu	36	11	60314414	60314414	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC15A3	51296	hgsc.bcm.edu	36	11	60470746	60470746	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DAK	26007	hgsc.bcm.edu	36	11	60868288	60868288	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BEST1	7439	hgsc.bcm.edu	36	11	61479945	61479945	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
INCENP	3619	hgsc.bcm.edu	36	11	61672588	61672588	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCGB1D1	10648	hgsc.bcm.edu	36	11	61714370	61714370	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTA2	9219	hgsc.bcm.edu	36	11	62122422	62122422	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RCOR2	283248	hgsc.bcm.edu	36	11	63438862	63438862	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRPT1	83707	hgsc.bcm.edu	36	11	63748944	63748944	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC22A11	55867	hgsc.bcm.edu	36	11	64086407	64086407	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC22A12	116085	hgsc.bcm.edu	36	11	64123850	64123850	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATG2A	23130	hgsc.bcm.edu	36	11	64430464	64430464	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYVN1	84447	hgsc.bcm.edu	36	11	64655324	64655324	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TIGD3	220359	hgsc.bcm.edu	36	11	64880483	64880483	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCNXL3	399909	hgsc.bcm.edu	36	11	65144391	65144391	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCNXL3	399909	hgsc.bcm.edu	36	11	65150058	65150058	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SIPA1	6494	hgsc.bcm.edu	36	11	65166395	65166395	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLC2	147700	hgsc.bcm.edu	36	11	65790141	65790141	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLC2	147700	hgsc.bcm.edu	36	11	65790948	65790948	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
YIF1A	10897	hgsc.bcm.edu	36	11	65812259	65812259	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACTN3	89	hgsc.bcm.edu	36	11	66083338	66083338	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADRBK1	156	hgsc.bcm.edu	36	11	66808312	66808312	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALDH3B2	222	hgsc.bcm.edu	36	11	67187399	67187399	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRP5	4041	hgsc.bcm.edu	36	11	67940430	67940430	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHANK2	22941	hgsc.bcm.edu	36	11	70011048	70011048	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FCHSD2	9873	hgsc.bcm.edu	36	11	72230148	72230148	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLCO2B1	11309	hgsc.bcm.edu	36	11	74557955	74557955	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRC32	2615	hgsc.bcm.edu	36	11	76048397	76048397	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO7A	4647	hgsc.bcm.edu	36	11	76579495	76579495	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCTD21	283219	hgsc.bcm.edu	36	11	77562661	77562661	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM181B	220382	hgsc.bcm.edu	36	11	82121217	82121217	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C11orf82	220042	hgsc.bcm.edu	36	11	82321947	82321947	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DLG2	4355	hgsc.bcm.edu	36	11	83639978	83639978	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC89	220388	hgsc.bcm.edu	36	11	85074554	85074554	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYTL2	54843	hgsc.bcm.edu	36	11	85084897	85084897	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAT3	120114	hgsc.bcm.edu	36	11	92217532	92217532	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR83	10888	hgsc.bcm.edu	36	11	93753062	93753062	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR83	10888	hgsc.bcm.edu	36	11	93773883	93773883	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR83	10888	hgsc.bcm.edu	36	11	93773976	93773976	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DYNC2H1	79659	hgsc.bcm.edu	36	11	102530460	102530460	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDI1	414301	hgsc.bcm.edu	36	11	103412886	103412886	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ELMOD1	55531	hgsc.bcm.edu	36	11	107011670	107011670	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NPAT	4863	hgsc.bcm.edu	36	11	107548254	107548254	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BTG4	54766	hgsc.bcm.edu	36	11	110871098	110871098	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB16	7704	hgsc.bcm.edu	36	11	113440279	113440279	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF259	8882	hgsc.bcm.edu	36	11	116163508	116163508	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SIK3	23387	hgsc.bcm.edu	36	11	116235343	116235343	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DSCAML1	57453	hgsc.bcm.edu	36	11	116894569	116894569	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLL	4297	hgsc.bcm.edu	36	11	117882026	117882026	+	Silent	SNP	G	G	A	rs9332843	byCluster;byFrequency;byHapMap	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MCAM	4162	hgsc.bcm.edu	36	11	118687481	118687481	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PVRL1	5818	hgsc.bcm.edu	36	11	119054436	119054436	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGEF12	23365	hgsc.bcm.edu	36	11	119849023	119849023	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TECTA	7007	hgsc.bcm.edu	36	11	120538159	120538159	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF202	7753	hgsc.bcm.edu	36	11	123102304	123102304	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF202	7753	hgsc.bcm.edu	36	11	123104155	123104155	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR8D2	283160	hgsc.bcm.edu	36	11	123694584	123694584	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PATE1	160065	hgsc.bcm.edu	36	11	125122862	125122862	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRPR	6734	hgsc.bcm.edu	36	11	125640483	125640483	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP32	0	hgsc.bcm.edu	36	11	128351716	128351716	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP32	0	hgsc.bcm.edu	36	11	128356523	128356523	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRDM10	56980	hgsc.bcm.edu	36	11	129307208	129307208	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB44	29068	hgsc.bcm.edu	36	11	129636872	129636872	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTS15	170689	hgsc.bcm.edu	36	11	129848515	129848515	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VPS26B	112936	hgsc.bcm.edu	36	11	133615144	133615144	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
THYN1	29087	hgsc.bcm.edu	36	11	133623563	133623563	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
B3GAT1	27087	hgsc.bcm.edu	36	11	133758883	133758883	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IRF4	3662	hgsc.bcm.edu	36	6	346482	346482	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HUS1B	135458	hgsc.bcm.edu	36	6	601815	601815	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXF2	2295	hgsc.bcm.edu	36	6	1339942	1339942	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPP1R3G	648791	hgsc.bcm.edu	36	6	5031679	5031679	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYLIP	29116	hgsc.bcm.edu	36	6	16253452	16253452	+	Silent	SNP	C	C	T	rs1060901	byCluster;byFrequency	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATXN1	6310	hgsc.bcm.edu	36	6	16435730	16435730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HDGFL1	154150	hgsc.bcm.edu	36	6	22678155	22678155	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HIST1H2AA	221613	hgsc.bcm.edu	36	6	25834725	25834725	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HIST1H1A	3024	hgsc.bcm.edu	36	6	26125427	26125427	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HIST1H2AB	8335	hgsc.bcm.edu	36	6	26141396	26141396	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PGBD1	84547	hgsc.bcm.edu	36	6	28361396	28361396	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HLA-A	3105	hgsc.bcm.edu	36	6	30018671	30018671	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SKIV2L	6499	hgsc.bcm.edu	36	6	32039219	32039219	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HLA-DRB1	3123	hgsc.bcm.edu	36	6	32665455	32665455	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HLA-DRB1	3123	hgsc.bcm.edu	36	6	32665464	32665464	+	Missense_Mutation	SNP	T	T	A	rs3179205	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HLA-DRB1	3123	hgsc.bcm.edu	36	6	32665467	32665467	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VPS52	6293	hgsc.bcm.edu	36	6	33347423	33347423	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB22	9278	hgsc.bcm.edu	36	6	33392146	33392146	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PI16	221476	hgsc.bcm.edu	36	6	37034971	37034971	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MDGA1	266727	hgsc.bcm.edu	36	6	37731513	37731513	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNK5	8645	hgsc.bcm.edu	36	6	39270402	39270402	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MOCS1	4337	hgsc.bcm.edu	36	6	40001487	40001487	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRERF1	55809	hgsc.bcm.edu	36	6	42304174	42304174	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRERF1	55809	hgsc.bcm.edu	36	6	42344472	42344472	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC22A7	10864	hgsc.bcm.edu	36	6	43378445	43378445	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AARS2	57505	hgsc.bcm.edu	36	6	44380014	44380014	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C6orf138	442213	hgsc.bcm.edu	36	6	47954536	47954536	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GLYATL3	0	hgsc.bcm.edu	36	6	49593136	49593136	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PKHD1	5314	hgsc.bcm.edu	36	6	51748623	51748623	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DST	667	hgsc.bcm.edu	36	6	56524975	56524975	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BEND6	221336	hgsc.bcm.edu	36	6	56988011	56988011	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BAG2	9532	hgsc.bcm.edu	36	6	57154876	57154876	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHF3	23469	hgsc.bcm.edu	36	6	64479505	64479505	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RIMS1	22999	hgsc.bcm.edu	36	6	72863563	72863563	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNQ5	56479	hgsc.bcm.edu	36	6	73871758	73871758	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OOEP	441161	hgsc.bcm.edu	36	6	74136088	74136088	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTO1	25821	hgsc.bcm.edu	36	6	74239974	74239974	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC17A5	26503	hgsc.bcm.edu	36	6	74410955	74410955	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL12A1	1303	hgsc.bcm.edu	36	6	75909776	75909776	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO6	4646	hgsc.bcm.edu	36	6	76607706	76607706	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHIP	55023	hgsc.bcm.edu	36	6	79736328	79736328	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RIPPLY2	134701	hgsc.bcm.edu	36	6	84620134	84620134	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBX18	9096	hgsc.bcm.edu	36	6	85529061	85529061	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPHA7	2045	hgsc.bcm.edu	36	6	94025893	94025893	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPHA7	2045	hgsc.bcm.edu	36	6	94177489	94177489	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MMS22L	0	hgsc.bcm.edu	36	6	97822474	97822474	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POU3F2	5454	hgsc.bcm.edu	36	6	99390337	99390337	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ASCC3	10973	hgsc.bcm.edu	36	6	101182210	101182210	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRIK2	2901	hgsc.bcm.edu	36	6	102444337	102444337	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
QRSL1	55278	hgsc.bcm.edu	36	6	107217628	107217628	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC22A16	85413	hgsc.bcm.edu	36	6	110866705	110866705	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDK19	0	hgsc.bcm.edu	36	6	111054998	111054998	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
REV3L	5980	hgsc.bcm.edu	36	6	111833398	111833398	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RFX6	222546	hgsc.bcm.edu	36	6	117356730	117356730	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C6orf174	387104	hgsc.bcm.edu	36	6	127838667	127838667	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LAMA2	3908	hgsc.bcm.edu	36	6	129555558	129555558	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPB41L2	2037	hgsc.bcm.edu	36	6	131232577	131232577	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ENPP1	5167	hgsc.bcm.edu	36	6	132242723	132242723	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAAR6	319100	hgsc.bcm.edu	36	6	132933573	132933573	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBPL1	9519	hgsc.bcm.edu	36	6	134347409	134347409	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AHI1	54806	hgsc.bcm.edu	36	6	135826136	135826136	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1244	57221	hgsc.bcm.edu	36	6	138676694	138676694	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC28A	25901	hgsc.bcm.edu	36	6	139148117	139148117	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TXLNB	167838	hgsc.bcm.edu	36	6	139605361	139605361	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR126	57211	hgsc.bcm.edu	36	6	142782785	142782785	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C6orf94	153918	hgsc.bcm.edu	36	6	144247179	144247179	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STX11	8676	hgsc.bcm.edu	36	6	144549879	144549879	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UTRN	7402	hgsc.bcm.edu	36	6	144810083	144810083	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPM2A	378884	hgsc.bcm.edu	36	6	145990339	145990339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPM2A	378884	hgsc.bcm.edu	36	6	145998159	145998159	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRM1	2911	hgsc.bcm.edu	36	6	146667577	146667577	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C6orf103	79747	hgsc.bcm.edu	36	6	147144888	147144888	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STXBP5	134957	hgsc.bcm.edu	36	6	147567436	147567436	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LATS1	9113	hgsc.bcm.edu	36	6	150064777	150064777	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ESR1	2099	hgsc.bcm.edu	36	6	152170942	152170942	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNE1	23345	hgsc.bcm.edu	36	6	152581094	152581094	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNE1	23345	hgsc.bcm.edu	36	6	152596620	152596620	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNE1	23345	hgsc.bcm.edu	36	6	152664804	152664804	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNE1	23345	hgsc.bcm.edu	36	6	152744068	152744068	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNE1	23345	hgsc.bcm.edu	36	6	152744178	152744178	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OPRM1	4988	hgsc.bcm.edu	36	6	154609540	154609540	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNJ2	8871	hgsc.bcm.edu	36	6	158369908	158369908	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IGF2R	3482	hgsc.bcm.edu	36	6	160397531	160397531	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TCP10L2	401285	hgsc.bcm.edu	36	6	167510586	167510586	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTLL2	83887	hgsc.bcm.edu	36	6	167674754	167674754	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLLT4	4301	hgsc.bcm.edu	36	6	168095378	168095378	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
THBS2	7058	hgsc.bcm.edu	36	6	169368304	169368304	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
THBS2	7058	hgsc.bcm.edu	36	6	169379648	169379648	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RPA1	25885	hgsc.bcm.edu	36	17	1738882	1738882	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MNT	4335	hgsc.bcm.edu	36	17	2245119	2245119	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0664	23277	hgsc.bcm.edu	36	17	2540675	2540675	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAP1GAP2	0	hgsc.bcm.edu	36	17	2856050	2856050	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR3A1	4994	hgsc.bcm.edu	36	17	3142214	3142214	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRPV3	162514	hgsc.bcm.edu	36	17	3382975	3382975	+	Missense_Mutation	SNP	G	G	A	rs4790513	byHapMap	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
P2RX5	5026	hgsc.bcm.edu	36	17	3540664	3540664	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP2A3	489	hgsc.bcm.edu	36	17	3775440	3775440	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TM4SF5	9032	hgsc.bcm.edu	36	17	4632652	4632652	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TM4SF5	9032	hgsc.bcm.edu	36	17	4633021	4633021	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLD2	5338	hgsc.bcm.edu	36	17	4660036	4660036	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLD2	5338	hgsc.bcm.edu	36	17	4664953	4664953	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PITPNM3	83394	hgsc.bcm.edu	36	17	6322762	6322762	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCL6B	255877	hgsc.bcm.edu	36	17	6871120	6871120	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACAP1	9744	hgsc.bcm.edu	36	17	7187994	7187994	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POLR2A	5430	hgsc.bcm.edu	36	17	7341816	7341816	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH2	146754	hgsc.bcm.edu	36	17	7636731	7636731	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIK3R6	146850	hgsc.bcm.edu	36	17	8671279	8671279	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYH13	8735	hgsc.bcm.edu	36	17	10145623	10145623	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYH13	8735	hgsc.bcm.edu	36	17	10145628	10145628	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYH13	8735	hgsc.bcm.edu	36	17	10162871	10162871	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYH13	8735	hgsc.bcm.edu	36	17	10165736	10165736	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYH1	4619	hgsc.bcm.edu	36	17	10359997	10359997	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH9	1770	hgsc.bcm.edu	36	17	11813489	11813489	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP2K4	6416	hgsc.bcm.edu	36	17	11951917	11951917	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP2K4	6416	hgsc.bcm.edu	36	17	11969395	11969395	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYOCD	93649	hgsc.bcm.edu	36	17	12510263	12510263	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PMP22	5827	hgsc.bcm.edu	36	17	15103227	15103227	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TEKT3	64518	hgsc.bcm.edu	36	17	15175181	15175181	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRIM16	10626	hgsc.bcm.edu	36	17	15476639	15476639	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MED9	55090	hgsc.bcm.edu	36	17	17321218	17321218	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO15A	51168	hgsc.bcm.edu	36	17	17964389	17964389	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LLGL1	3996	hgsc.bcm.edu	36	17	18085700	18085700	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ULK2	9706	hgsc.bcm.edu	36	17	19690740	19690740	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPECC1	92521	hgsc.bcm.edu	36	17	20049534	20049534	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KSR1	8844	hgsc.bcm.edu	36	17	22943732	22943732	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KSR1	8844	hgsc.bcm.edu	36	17	22956897	22956897	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LGALS9	3965	hgsc.bcm.edu	36	17	22994762	22994762	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SUPT6H	6830	hgsc.bcm.edu	36	17	24038331	24038331	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAOK1	57551	hgsc.bcm.edu	36	17	24842984	24842984	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EFCAB5	374786	hgsc.bcm.edu	36	17	25459142	25459142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAB11FIP4	84440	hgsc.bcm.edu	36	17	26872410	26872410	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM132E	124842	hgsc.bcm.edu	36	17	29980275	29980275	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AP2B1	163	hgsc.bcm.edu	36	17	31008778	31008778	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLLT6	4302	hgsc.bcm.edu	36	17	34126439	34126439	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIP4K2B	8396	hgsc.bcm.edu	36	17	34190351	34190351	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MED1	8930	hgsc.bcm.edu	36	17	34819624	34819624	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERBB2	2064	hgsc.bcm.edu	36	17	35137295	35137295	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNS4	84951	hgsc.bcm.edu	36	17	35906178	35906178	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT24	192666	hgsc.bcm.edu	36	17	36108392	36108392	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT20	54474	hgsc.bcm.edu	36	17	36290027	36290027	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRTAP4-7	100132476	hgsc.bcm.edu	36	17	36494153	36494153	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRTAP9-2	83899	hgsc.bcm.edu	36	17	36636514	36636514	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRTAP9-4	85280	hgsc.bcm.edu	36	17	36659890	36659890	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT9	3857	hgsc.bcm.edu	36	17	36978143	36978143	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNP	4880	hgsc.bcm.edu	36	17	37374237	37374237	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KAT2A	2648	hgsc.bcm.edu	36	17	37523344	37523344	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLEKHH3	79990	hgsc.bcm.edu	36	17	38076561	38076561	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BRCA1	672	hgsc.bcm.edu	36	17	38497335	38497335	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HDAC5	10014	hgsc.bcm.edu	36	17	39515492	39515492	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HDAC5	10014	hgsc.bcm.edu	36	17	39520468	39520468	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C17orf53	78995	hgsc.bcm.edu	36	17	39580963	39580963	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C17orf53	78995	hgsc.bcm.edu	36	17	39588256	39588256	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FZD2	2535	hgsc.bcm.edu	36	17	39991717	39991717	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACBD4	79777	hgsc.bcm.edu	36	17	40572033	40572033	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP3K14	9020	hgsc.bcm.edu	36	17	40700275	40700275	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAPT	4137	hgsc.bcm.edu	36	17	41416610	41416610	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1267	284058	hgsc.bcm.edu	36	17	41466643	41466643	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1267	284058	hgsc.bcm.edu	36	17	41483806	41483806	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KPNB1	3837	hgsc.bcm.edu	36	17	43102196	43102196	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NFE2L1	4779	hgsc.bcm.edu	36	17	43490674	43490674	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
B4GALNT2	124872	hgsc.bcm.edu	36	17	44596501	44596501	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
B4GALNT2	124872	hgsc.bcm.edu	36	17	44601129	44601129	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL1A1	1277	hgsc.bcm.edu	36	17	45619020	45619020	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYCBPAP	84073	hgsc.bcm.edu	36	17	45958398	45958398	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CACNA1G	8913	hgsc.bcm.edu	36	17	46038287	46038287	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CACNA1G	8913	hgsc.bcm.edu	36	17	46052161	46052161	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD40	91369	hgsc.bcm.edu	36	17	46129410	46129410	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPAG9	9043	hgsc.bcm.edu	36	17	46422936	46422936	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MBTD1	54799	hgsc.bcm.edu	36	17	46635563	46635563	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MBTD1	54799	hgsc.bcm.edu	36	17	46639362	46639362	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CA10	56934	hgsc.bcm.edu	36	17	47065969	47065969	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STXBP4	252983	hgsc.bcm.edu	36	17	50511093	50511093	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRIM25	7706	hgsc.bcm.edu	36	17	52346281	52346281	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTMR4	9110	hgsc.bcm.edu	36	17	53925268	53925268	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPM1E	22843	hgsc.bcm.edu	36	17	54188438	54188438	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP32	84669	hgsc.bcm.edu	36	17	55654665	55654665	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBX2	6909	hgsc.bcm.edu	36	17	56833991	56833991	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TLK2	11011	hgsc.bcm.edu	36	17	57955346	57955346	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MARCH10	162333	hgsc.bcm.edu	36	17	58168206	58168206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TANC2	26115	hgsc.bcm.edu	36	17	58819777	58819777	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CYB561	1534	hgsc.bcm.edu	36	17	58866279	58866279	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNH6	81033	hgsc.bcm.edu	36	17	58973408	58973408	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCN4A	6329	hgsc.bcm.edu	36	17	59392475	59392475	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERN1	2081	hgsc.bcm.edu	36	17	59497960	59497960	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGS9	388531	hgsc.bcm.edu	36	17	60651964	60651964	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ABCA6	23460	hgsc.bcm.edu	36	17	64620996	64620996	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ABCA5	23461	hgsc.bcm.edu	36	17	64763283	64763283	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CD300A	11314	hgsc.bcm.edu	36	17	69985222	69985222	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NAT9	26151	hgsc.bcm.edu	36	17	70279967	70279967	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSEN54	283989	hgsc.bcm.edu	36	17	71029464	71029464	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UNC13D	201294	hgsc.bcm.edu	36	17	71343090	71343090	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRP68	6730	hgsc.bcm.edu	36	17	71571682	71571682	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBE2O	63893	hgsc.bcm.edu	36	17	71899257	71899257	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMC8	147138	hgsc.bcm.edu	36	17	73646900	73646900	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH17	8632	hgsc.bcm.edu	36	17	73962211	73962211	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ENGASE	64772	hgsc.bcm.edu	36	17	74587954	74587954	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBFOX3	0	hgsc.bcm.edu	36	17	74604341	74604341	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBFOX3	0	hgsc.bcm.edu	36	17	74605001	74605001	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AATK	9625	hgsc.bcm.edu	36	17	76709136	76709136	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AATK	9625	hgsc.bcm.edu	36	17	76713148	76713148	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BAHCC1	57597	hgsc.bcm.edu	36	17	77024308	77024308	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FASN	2194	hgsc.bcm.edu	36	17	77630541	77630541	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FASN	2194	hgsc.bcm.edu	36	17	77641556	77641556	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAB40B	10966	hgsc.bcm.edu	36	17	78209829	78209829	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TPTE	7179	hgsc.bcm.edu	36	21	9973229	9973229	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LIPI	149998	hgsc.bcm.edu	36	21	14459496	14459496	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCAM2	4685	hgsc.bcm.edu	36	21	21578483	21578483	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRIK1	2897	hgsc.bcm.edu	36	21	29988222	29988222	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRTAP13-4	284827	hgsc.bcm.edu	36	21	30724821	30724821	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRTAP15-1	254950	hgsc.bcm.edu	36	21	30734773	30734773	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TIAM1	7074	hgsc.bcm.edu	36	21	31560344	31560344	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SON	6651	hgsc.bcm.edu	36	21	33845139	33845139	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITSN1	6453	hgsc.bcm.edu	36	21	34159339	34159339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNE1	3753	hgsc.bcm.edu	36	21	34743566	34743566	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DYRK1A	1859	hgsc.bcm.edu	36	21	37774949	37774949	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DSCAM	1826	hgsc.bcm.edu	36	21	40632956	40632956	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMPRSS2	7113	hgsc.bcm.edu	36	21	41761542	41761542	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UMODL1	89766	hgsc.bcm.edu	36	21	42412449	42412449	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NDUFV3	4731	hgsc.bcm.edu	36	21	43197305	43197305	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PFKL	5211	hgsc.bcm.edu	36	21	44557964	44557964	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRC3	81543	hgsc.bcm.edu	36	21	44701547	44701547	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRTAP10-3	386682	hgsc.bcm.edu	36	21	44802430	44802430	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITGB2	3689	hgsc.bcm.edu	36	21	45133739	45133739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITGB2	3689	hgsc.bcm.edu	36	21	45134432	45134432	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL18A1	80781	hgsc.bcm.edu	36	21	45739213	45739213	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL6A1	1291	hgsc.bcm.edu	36	21	46248254	46248254	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C16orf11	146325	hgsc.bcm.edu	36	16	553724	553724	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAB40C	57799	hgsc.bcm.edu	36	16	580350	580350	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SOX8	30812	hgsc.bcm.edu	36	16	974902	974902	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BAIAP3	8938	hgsc.bcm.edu	36	16	1328919	1328919	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GNPTG	84572	hgsc.bcm.edu	36	16	1352649	1352649	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C16orf91	283951	hgsc.bcm.edu	36	16	1416347	1416347	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EME2	197342	hgsc.bcm.edu	36	16	1763716	1763716	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NUBP2	10101	hgsc.bcm.edu	36	16	1777742	1777742	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RPL3L	6123	hgsc.bcm.edu	36	16	1935610	1935610	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NTHL1	4913	hgsc.bcm.edu	36	16	2036335	2036335	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSC2	7249	hgsc.bcm.edu	36	16	2062325	2062325	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PKD1	5310	hgsc.bcm.edu	36	16	2098634	2098634	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AMDHD2	51005	hgsc.bcm.edu	36	16	2519039	2519039	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCTD5	54442	hgsc.bcm.edu	36	16	2689902	2689902	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRRM2	23524	hgsc.bcm.edu	36	16	2756875	2756875	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FLYWCH1	84256	hgsc.bcm.edu	36	16	2923278	2923278	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PAQR4	124222	hgsc.bcm.edu	36	16	2961763	2961763	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MMP25	79148	hgsc.bcm.edu	36	16	3040438	3040438	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GLIS2	84662	hgsc.bcm.edu	36	16	4325388	4325388	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPL	5493	hgsc.bcm.edu	36	16	4889371	4889371	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C16orf72	29035	hgsc.bcm.edu	36	16	9104595	9104595	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRIN2A	2903	hgsc.bcm.edu	36	16	10181623	10181623	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MPV17L	255027	hgsc.bcm.edu	36	16	15397467	15397467	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
XYLT1	64131	hgsc.bcm.edu	36	16	17129077	17129077	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMG1	23049	hgsc.bcm.edu	36	16	18790244	18790244	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMC5	79838	hgsc.bcm.edu	36	16	19358980	19358980	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CP110	9738	hgsc.bcm.edu	36	16	19463999	19463999	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERI2	112479	hgsc.bcm.edu	36	16	20717001	20717001	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM159	57146	hgsc.bcm.edu	36	16	21098357	21098357	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLK1	5347	hgsc.bcm.edu	36	16	23608476	23608476	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CACNG3	10368	hgsc.bcm.edu	36	16	24273771	24273771	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZKSCAN2	342357	hgsc.bcm.edu	36	16	25158864	25158864	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL21R	50615	hgsc.bcm.edu	36	16	27348918	27348918	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
XPO6	23214	hgsc.bcm.edu	36	16	28088651	28088651	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C16orf54	283897	hgsc.bcm.edu	36	16	29663501	29663501	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBC1D10B	26000	hgsc.bcm.edu	36	16	30284401	30284401	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF646	9726	hgsc.bcm.edu	36	16	31000498	31000498	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCKDK	10295	hgsc.bcm.edu	36	16	31028368	31028368	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF267	10308	hgsc.bcm.edu	36	16	31834040	31834040	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHCBP1	79801	hgsc.bcm.edu	36	16	45195767	45195767	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NETO2	81831	hgsc.bcm.edu	36	16	45674935	45674935	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PAPD5	64282	hgsc.bcm.edu	36	16	48819341	48819341	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IRX3	79191	hgsc.bcm.edu	36	16	52876476	52876476	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MMP2	4313	hgsc.bcm.edu	36	16	54096814	54096814	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CES1	1066	hgsc.bcm.edu	36	16	54412806	54412806	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NLRC5	84166	hgsc.bcm.edu	36	16	55633469	55633469	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COQ9	57017	hgsc.bcm.edu	36	16	56042455	56042455	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC135	84229	hgsc.bcm.edu	36	16	56291642	56291642	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KATNB1	10300	hgsc.bcm.edu	36	16	56347780	56347780	+	Missense_Mutation	SNP	C	C	T	rs11555150	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNGB1	1258	hgsc.bcm.edu	36	16	56475787	56475787	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC113	29070	hgsc.bcm.edu	36	16	56845466	56845466	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNOT1	23019	hgsc.bcm.edu	36	16	57143042	57143042	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ELMO3	79767	hgsc.bcm.edu	36	16	65793420	65793420	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM65A	79567	hgsc.bcm.edu	36	16	66129926	66129926	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC12A4	6560	hgsc.bcm.edu	36	16	66538790	66538790	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDPR	55066	hgsc.bcm.edu	36	16	68720429	68720429	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AARS	16	hgsc.bcm.edu	36	16	68846040	68846040	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HYDIN	54768	hgsc.bcm.edu	36	16	69460119	69460119	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HYDIN	54768	hgsc.bcm.edu	36	16	69623151	69623151	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FTSJD1	55783	hgsc.bcm.edu	36	16	69875237	69875237	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AP1G1	164	hgsc.bcm.edu	36	16	70365994	70365994	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHODH	1723	hgsc.bcm.edu	36	16	70606042	70606042	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFHX3	463	hgsc.bcm.edu	36	16	71386849	71386849	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFHX3	463	hgsc.bcm.edu	36	16	71387764	71387764	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFHX3	463	hgsc.bcm.edu	36	16	71389876	71389876	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFHX3	463	hgsc.bcm.edu	36	16	71550991	71550991	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTRB2	440387	hgsc.bcm.edu	36	16	73797535	73797535	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNTNAP4	85445	hgsc.bcm.edu	36	16	75040314	75040314	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAF	4094	hgsc.bcm.edu	36	16	78185911	78185911	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDYL2	124359	hgsc.bcm.edu	36	16	79204113	79204113	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CENPN	55839	hgsc.bcm.edu	36	16	79615845	79615845	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GAN	8139	hgsc.bcm.edu	36	16	79945672	79945672	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1609	57707	hgsc.bcm.edu	36	16	83078082	83078082	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHL36	79786	hgsc.bcm.edu	36	16	83252980	83252980	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHDC4	54758	hgsc.bcm.edu	36	16	86300723	86300723	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BANP	54971	hgsc.bcm.edu	36	16	86624286	86624286	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF469	84627	hgsc.bcm.edu	36	16	87031678	87031678	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFPM1	161882	hgsc.bcm.edu	36	16	87122055	87122055	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM38A	9780	hgsc.bcm.edu	36	16	87326566	87326566	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPG7	6687	hgsc.bcm.edu	36	16	88130718	88130718	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPG7	6687	hgsc.bcm.edu	36	16	88144473	88144473	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHMP1A	5119	hgsc.bcm.edu	36	16	88240483	88240483	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPATA2L	124044	hgsc.bcm.edu	36	16	88291762	88291762	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TCF25	22980	hgsc.bcm.edu	36	16	88501163	88501163	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
THOC1	9984	hgsc.bcm.edu	36	18	236401	236401	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TYMS	7298	hgsc.bcm.edu	36	18	659136	659136	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LPIN2	9663	hgsc.bcm.edu	36	18	2915363	2915363	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LAMA1	284217	hgsc.bcm.edu	36	18	7026080	7026080	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0802	23255	hgsc.bcm.edu	36	18	8788263	8788263	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RALBP1	85021	hgsc.bcm.edu	36	18	9525807	9525807	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IMPA2	3613	hgsc.bcm.edu	36	18	12004362	12004362	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GREB1L	0	hgsc.bcm.edu	36	18	17334596	17334596	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MIB1	57534	hgsc.bcm.edu	36	18	17678070	17678070	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NPC1	257641	hgsc.bcm.edu	36	18	19373788	19373788	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OSBPL1A	114876	hgsc.bcm.edu	36	18	20073264	20073264	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAF4B	493913	hgsc.bcm.edu	36	18	22099163	22099163	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAF4B	493913	hgsc.bcm.edu	36	18	22120151	22120151	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCTD1	284252	hgsc.bcm.edu	36	18	22293730	22293730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RPRD1A	55197	hgsc.bcm.edu	36	18	31860959	31860959	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FHOD3	91010	hgsc.bcm.edu	36	18	32552165	32552165	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CELF4	56853	hgsc.bcm.edu	36	18	33108367	33108367	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIK3C3	5289	hgsc.bcm.edu	36	18	37871655	37871655	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LOXHD1	125336	hgsc.bcm.edu	36	18	42411750	42411750	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAB27B	5874	hgsc.bcm.edu	36	18	50707546	50707546	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNFRSF11A	8792	hgsc.bcm.edu	36	18	58184931	58184931	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DSEL	92126	hgsc.bcm.edu	36	18	63330802	63330802	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RTTN	25914	hgsc.bcm.edu	36	18	65824676	65824676	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NETO1	81832	hgsc.bcm.edu	36	18	68568759	68568759	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FBXO15	201456	hgsc.bcm.edu	36	18	69941697	69941697	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNDP1	84735	hgsc.bcm.edu	36	18	70377540	70377540	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SALL3	27164	hgsc.bcm.edu	36	18	74854302	74854302	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SALL3	27164	hgsc.bcm.edu	36	18	74855092	74855092	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SALL3	27164	hgsc.bcm.edu	36	18	74856148	74856148	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LHFPL4	375612	hgsc.bcm.edu	36	3	9569220	9569220	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL17RC	84818	hgsc.bcm.edu	36	3	9934171	9934171	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IQSEC1	9922	hgsc.bcm.edu	36	3	12953142	12953142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NUP210	23225	hgsc.bcm.edu	36	3	13388398	13388398	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC6A6	6533	hgsc.bcm.edu	36	3	14493787	14493787	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CAPN7	23473	hgsc.bcm.edu	36	3	15263304	15263304	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GALNTL2	117248	hgsc.bcm.edu	36	3	16239164	16239164	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC4A7	9497	hgsc.bcm.edu	36	3	27417338	27417338	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EOMES	8320	hgsc.bcm.edu	36	3	27733947	27733947	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TGFBR2	7048	hgsc.bcm.edu	36	3	30707974	30707974	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GADL1	339896	hgsc.bcm.edu	36	3	30873540	30873540	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMPPE	643853	hgsc.bcm.edu	36	3	33109475	33109475	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRANK1	0	hgsc.bcm.edu	36	3	36873697	36873697	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLCD1	5333	hgsc.bcm.edu	36	3	38027904	38027904	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACVR2B	93	hgsc.bcm.edu	36	3	38499684	38499684	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCN10A	6336	hgsc.bcm.edu	36	3	38738821	38738821	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCR8	1237	hgsc.bcm.edu	36	3	39349876	39349876	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RPL14	9045	hgsc.bcm.edu	36	3	40478586	40478586	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRAK1	22906	hgsc.bcm.edu	36	3	42239534	42239534	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRAK1	22906	hgsc.bcm.edu	36	3	42239614	42239614	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HIGD1A	25994	hgsc.bcm.edu	36	3	42802652	42802652	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF197	10168	hgsc.bcm.edu	36	3	44660603	44660603	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF15	56992	hgsc.bcm.edu	36	3	44854829	44854829	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCR9	10803	hgsc.bcm.edu	36	3	45918352	45918352	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCR1	1230	hgsc.bcm.edu	36	3	46220411	46220411	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LTF	4057	hgsc.bcm.edu	36	3	46476212	46476212	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC12	151903	hgsc.bcm.edu	36	3	46993154	46993154	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHL18	23276	hgsc.bcm.edu	36	3	47351257	47351257	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPN23	25930	hgsc.bcm.edu	36	3	47426819	47426819	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCAP	22937	hgsc.bcm.edu	36	3	47437223	47437223	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CSPG5	10675	hgsc.bcm.edu	36	3	47594255	47594255	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP4	4134	hgsc.bcm.edu	36	3	47932904	47932904	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL7A1	1294	hgsc.bcm.edu	36	3	48602674	48602674	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCKIPSD	51517	hgsc.bcm.edu	36	3	48691034	48691034	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP19	10869	hgsc.bcm.edu	36	3	49121516	49121516	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C3orf62	375341	hgsc.bcm.edu	36	3	49289021	49289021	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AMT	275	hgsc.bcm.edu	36	3	49432651	49432651	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
APEH	327	hgsc.bcm.edu	36	3	49693606	49693606	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
APEH	327	hgsc.bcm.edu	36	3	49695283	49695283	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MST1	6789	hgsc.bcm.edu	36	3	49700028	49700028	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IP6K1	9807	hgsc.bcm.edu	36	3	49745287	49745287	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MST1R	4486	hgsc.bcm.edu	36	3	49911649	49911649	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH1	25981	hgsc.bcm.edu	36	3	52337011	52337011	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH1	25981	hgsc.bcm.edu	36	3	52402001	52402001	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NISCH	11188	hgsc.bcm.edu	36	3	52499887	52499887	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NEK4	6787	hgsc.bcm.edu	36	3	52720915	52720915	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITIH1	3697	hgsc.bcm.edu	36	3	52788090	52788090	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RFT1	91869	hgsc.bcm.edu	36	3	53139438	53139438	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARF4	378	hgsc.bcm.edu	36	3	57557906	57557906	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRG	5793	hgsc.bcm.edu	36	3	62253172	62253172	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATXN7	6314	hgsc.bcm.edu	36	3	63960166	63960166	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRICKLE2	166336	hgsc.bcm.edu	36	3	64107825	64107825	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTS9	56999	hgsc.bcm.edu	36	3	64619286	64619286	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAGI1	154043	hgsc.bcm.edu	36	3	65317789	65317789	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EIF4E3	317649	hgsc.bcm.edu	36	3	71831465	71831465	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GXYLT2	0	hgsc.bcm.edu	36	3	73106971	73106971	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNTN3	5067	hgsc.bcm.edu	36	3	74429798	74429798	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNTN3	5067	hgsc.bcm.edu	36	3	74501045	74501045	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ROBO1	6091	hgsc.bcm.edu	36	3	78765784	78765784	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VGLL3	389136	hgsc.bcm.edu	36	3	87100700	87100700	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF654	55279	hgsc.bcm.edu	36	3	88271321	88271321	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPHA3	2042	hgsc.bcm.edu	36	3	89472876	89472876	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBC1D23	55773	hgsc.bcm.edu	36	3	101503751	101503751	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA2018	205717	hgsc.bcm.edu	36	3	114859952	114859952	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADPRH	141	hgsc.bcm.edu	36	3	120783995	120783995	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STXBP5L	9515	hgsc.bcm.edu	36	3	122424681	122424681	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HEG1	57493	hgsc.bcm.edu	36	3	126215522	126215522	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLXNA1	5361	hgsc.bcm.edu	36	3	128231452	128231452	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLXND1	23129	hgsc.bcm.edu	36	3	130775230	130775230	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL6A6	131873	hgsc.bcm.edu	36	3	131767128	131767128	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL6A6	131873	hgsc.bcm.edu	36	3	131863237	131863237	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIK3R4	30849	hgsc.bcm.edu	36	3	131880885	131880885	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MRPL3	11222	hgsc.bcm.edu	36	3	132701991	132701991	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ESYT3	83850	hgsc.bcm.edu	36	3	139671028	139671028	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ESYT3	83850	hgsc.bcm.edu	36	3	139675136	139675136	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COPB2	9276	hgsc.bcm.edu	36	3	140574778	140574778	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATR	390502	hgsc.bcm.edu	36	3	143769635	143769635	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLOD2	5352	hgsc.bcm.edu	36	3	147282233	147282233	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGEF26	0	hgsc.bcm.edu	36	3	155322931	155322931	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR149	344758	hgsc.bcm.edu	36	3	155538753	155538753	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCNL1	57018	hgsc.bcm.edu	36	3	158350071	158350071	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHOX2	6474	hgsc.bcm.edu	36	3	159303207	159303207	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMC4	10051	hgsc.bcm.edu	36	3	161625349	161625349	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KPNA4	3840	hgsc.bcm.edu	36	3	161737307	161737307	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLITRK3	22865	hgsc.bcm.edu	36	3	166390468	166390468	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCHE	590	hgsc.bcm.edu	36	3	167030526	167030526	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDR49	151790	hgsc.bcm.edu	36	3	168737423	168737423	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHC3	80012	hgsc.bcm.edu	36	3	171323105	171323105	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLD1	5589	hgsc.bcm.edu	36	3	172812877	172812877	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FNDC3B	64778	hgsc.bcm.edu	36	3	173543570	173543570	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIK3CA	5290	hgsc.bcm.edu	36	3	180418791	180418791	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PEX5L	51555	hgsc.bcm.edu	36	3	181002442	181002442	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VWA5B2	90113	hgsc.bcm.edu	36	3	185440012	185440012	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALG3	10195	hgsc.bcm.edu	36	3	185444340	185444340	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ECE2	9718	hgsc.bcm.edu	36	3	185492678	185492678	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLCN2	1181	hgsc.bcm.edu	36	3	185558523	185558523	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RTP2	344892	hgsc.bcm.edu	36	3	188899420	188899420	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TP63	8626	hgsc.bcm.edu	36	3	191008877	191008877	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP13A5	344905	hgsc.bcm.edu	36	3	194475552	194475552	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP13A5	344905	hgsc.bcm.edu	36	3	194522249	194522249	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OPA1	9968	hgsc.bcm.edu	36	3	194848588	194848588	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP13A3	79572	hgsc.bcm.edu	36	3	195662825	195662825	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM44	93109	hgsc.bcm.edu	36	3	195825547	195825547	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC20	200958	hgsc.bcm.edu	36	3	196938647	196938647	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC4	4585	hgsc.bcm.edu	36	3	196996000	196996000	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC4	4585	hgsc.bcm.edu	36	3	196996326	196996326	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MUC4	4585	hgsc.bcm.edu	36	3	197000656	197000656	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF168	165918	hgsc.bcm.edu	36	3	197699930	197699930	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIGZ	80235	hgsc.bcm.edu	36	3	198158898	198158898	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC6A12	6539	hgsc.bcm.edu	36	12	189378	189378	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DCP1B	196513	hgsc.bcm.edu	36	12	1928664	1928664	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CACNA1C	775	hgsc.bcm.edu	36	12	2465619	2465619	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AKAP3	10566	hgsc.bcm.edu	36	12	4595215	4595215	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNA1	3736	hgsc.bcm.edu	36	12	4891520	4891520	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
A2ML1	144568	hgsc.bcm.edu	36	12	8896155	8896155	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
A2ML1	144568	hgsc.bcm.edu	36	12	8901045	8901045	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLEC2D	29121	hgsc.bcm.edu	36	12	9731899	9731899	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLEC2D	29121	hgsc.bcm.edu	36	12	9738713	9738713	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAS2R31	259290	hgsc.bcm.edu	36	12	11075012	11075012	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRIN2B	2904	hgsc.bcm.edu	36	12	13607018	13607018	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRIN2B	2904	hgsc.bcm.edu	36	12	13652880	13652880	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNJ8	3764	hgsc.bcm.edu	36	12	21817610	21817610	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ST8SIA1	6489	hgsc.bcm.edu	36	12	22293214	22293214	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCAT1	586	hgsc.bcm.edu	36	12	24894121	24894121	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRAS	3845	hgsc.bcm.edu	36	12	25271503	25271503	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITPR2	3709	hgsc.bcm.edu	36	12	26700640	26700640	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C12orf70	341346	hgsc.bcm.edu	36	12	27519014	27519014	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C12orf70	341346	hgsc.bcm.edu	36	12	27532716	27532716	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OVCH1	341350	hgsc.bcm.edu	36	12	29519266	29519266	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSPAN11	441631	hgsc.bcm.edu	36	12	31008117	31008117	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALG10	144245	hgsc.bcm.edu	36	12	34070316	34070316	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC2A13	114134	hgsc.bcm.edu	36	12	38444644	38444644	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPHLN1	51535	hgsc.bcm.edu	36	12	41032049	41032049	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTS20	80070	hgsc.bcm.edu	36	12	42123883	42123883	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NELL2	4753	hgsc.bcm.edu	36	12	43200233	43200233	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NELL2	4753	hgsc.bcm.edu	36	12	43200269	43200269	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRSF2IP	0	hgsc.bcm.edu	36	12	44607690	44607690	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADCY6	112	hgsc.bcm.edu	36	12	47462923	47462923	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC65	85478	hgsc.bcm.edu	36	12	47598840	47598840	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LMBR1L	55716	hgsc.bcm.edu	36	12	47783205	47783205	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNH3	23416	hgsc.bcm.edu	36	12	48237770	48237770	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM186B	84070	hgsc.bcm.edu	36	12	48267677	48267677	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCKAP5L	0	hgsc.bcm.edu	36	12	48476122	48476122	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LASS5	91012	hgsc.bcm.edu	36	12	48818638	48818638	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD33	341405	hgsc.bcm.edu	36	12	50569502	50569502	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT81	3887	hgsc.bcm.edu	36	12	50966438	50966438	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT6B	3854	hgsc.bcm.edu	36	12	51127615	51127615	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT6B	3854	hgsc.bcm.edu	36	12	51130518	51130518	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT74	121391	hgsc.bcm.edu	36	12	51248308	51248308	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT73	319101	hgsc.bcm.edu	36	12	51298285	51298285	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCKAP1L	3071	hgsc.bcm.edu	36	12	53217058	53217058	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR6C1	390321	hgsc.bcm.edu	36	12	54001157	54001157	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR6C4	341418	hgsc.bcm.edu	36	12	54231398	54231398	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GDF11	10220	hgsc.bcm.edu	36	12	54428748	54428748	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MMP19	4327	hgsc.bcm.edu	36	12	54519617	54519617	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDK2	1017	hgsc.bcm.edu	36	12	54648155	54648155	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BAZ2A	11176	hgsc.bcm.edu	36	12	55285244	55285244	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR182	11318	hgsc.bcm.edu	36	12	55675989	55675989	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDIT3	1649	hgsc.bcm.edu	36	12	56196950	56196950	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AVIL	10677	hgsc.bcm.edu	36	12	56490879	56490879	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC16A7	9194	hgsc.bcm.edu	36	12	58454770	58454770	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CAPS2	84698	hgsc.bcm.edu	36	12	73965118	73965118	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NAV3	89795	hgsc.bcm.edu	36	12	77128340	77128340	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYT1	6857	hgsc.bcm.edu	36	12	78203705	78203705	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYF6	4618	hgsc.bcm.edu	36	12	79625761	79625761	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACSS3	79611	hgsc.bcm.edu	36	12	80057055	80057055	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CEP290	80184	hgsc.bcm.edu	36	12	87038044	87038044	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C12orf12	196477	hgsc.bcm.edu	36	12	89872450	89872450	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NEDD1	121441	hgsc.bcm.edu	36	12	95827699	95827699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYBPC1	4604	hgsc.bcm.edu	36	12	100547395	100547395	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYBPC1	4604	hgsc.bcm.edu	36	12	100554623	100554623	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STAB2	55576	hgsc.bcm.edu	36	12	102624811	102624811	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HSP90B1	7184	hgsc.bcm.edu	36	12	102861669	102861669	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CRY1	1407	hgsc.bcm.edu	36	12	105915863	105915863	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WSCD2	9671	hgsc.bcm.edu	36	12	107128115	107128115	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACACB	32	hgsc.bcm.edu	36	12	108163348	108163348	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXN4	121643	hgsc.bcm.edu	36	12	108207611	108207611	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IFT81	28981	hgsc.bcm.edu	36	12	109127804	109127804	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CUX2	23316	hgsc.bcm.edu	36	12	110244637	110244637	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATXN2	6311	hgsc.bcm.edu	36	12	110392921	110392921	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RPH3A	22895	hgsc.bcm.edu	36	12	111790637	111790637	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBM19	9904	hgsc.bcm.edu	36	12	112862264	112862264	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNFT2	84900	hgsc.bcm.edu	36	12	115672038	115672038	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAOK3	51347	hgsc.bcm.edu	36	12	117155941	117155941	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF34	80196	hgsc.bcm.edu	36	12	120342469	120342469	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCL7A	605	hgsc.bcm.edu	36	12	120957649	120957649	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLXIP	22877	hgsc.bcm.edu	36	12	121188067	121188067	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RSRC2	65117	hgsc.bcm.edu	36	12	121569436	121569436	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HIP1R	9026	hgsc.bcm.edu	36	12	121908674	121908674	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCOR2	9612	hgsc.bcm.edu	36	12	123377934	123377934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCOR2	9612	hgsc.bcm.edu	36	12	123422658	123422658	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBC	7316	hgsc.bcm.edu	36	12	123963977	123963977	+	Silent	SNP	G	G	A	rs1138413	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RIMBP2	23504	hgsc.bcm.edu	36	12	129488964	129488964	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PUS1	80324	hgsc.bcm.edu	36	12	130992310	130992310	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EP400	57634	hgsc.bcm.edu	36	12	131113052	131113052	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EP400	57634	hgsc.bcm.edu	36	12	131117895	131117895	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CYFIP1	23191	hgsc.bcm.edu	36	15	20496488	20496488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAGEL2	54551	hgsc.bcm.edu	36	15	21441653	21441653	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GABRB3	2562	hgsc.bcm.edu	36	15	24357210	24357210	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OCA2	4948	hgsc.bcm.edu	36	15	25950880	25950880	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HERC2	8924	hgsc.bcm.edu	36	15	26093335	26093335	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HERC2	8924	hgsc.bcm.edu	36	15	26148002	26148002	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HERC2	8924	hgsc.bcm.edu	36	15	26175869	26175869	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
APBA2	321	hgsc.bcm.edu	36	15	27133814	27133814	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TJP1	7082	hgsc.bcm.edu	36	15	27813838	27813838	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GJD2	57369	hgsc.bcm.edu	36	15	32831974	32831974	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACTC1	70	hgsc.bcm.edu	36	15	32871757	32871757	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MEIS2	4212	hgsc.bcm.edu	36	15	34971740	34971740	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BAHD1	22893	hgsc.bcm.edu	36	15	38544826	38544826	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLA2G4B	100137049	hgsc.bcm.edu	36	15	39926260	39926260	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EHD4	30844	hgsc.bcm.edu	36	15	40033278	40033278	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP1A	4130	hgsc.bcm.edu	36	15	41607271	41607271	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDIA3	2923	hgsc.bcm.edu	36	15	41842677	41842677	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTDSPL2	51496	hgsc.bcm.edu	36	15	42598663	42598663	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SQRDL	58472	hgsc.bcm.edu	36	15	43761977	43761977	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEMA6D	80031	hgsc.bcm.edu	36	15	45843456	45843456	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FBN1	2200	hgsc.bcm.edu	36	15	46526239	46526239	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C15orf33	196951	hgsc.bcm.edu	36	15	47414948	47414948	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP8B4	79895	hgsc.bcm.edu	36	15	47958876	47958876	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO5C	55930	hgsc.bcm.edu	36	15	50303067	50303067	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO5A	4644	hgsc.bcm.edu	36	15	50449754	50449754	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CGNL1	84952	hgsc.bcm.edu	36	15	55519059	55519059	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALDH1A2	8854	hgsc.bcm.edu	36	15	56145079	56145079	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LIPC	3990	hgsc.bcm.edu	36	15	56627858	56627858	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLTM	79811	hgsc.bcm.edu	36	15	56976678	56976678	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO1E	4643	hgsc.bcm.edu	36	15	57307049	57307049	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANXA2	302	hgsc.bcm.edu	36	15	58443943	58443943	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IGDCC4	57722	hgsc.bcm.edu	36	15	63474509	63474509	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC24A1	9187	hgsc.bcm.edu	36	15	63730010	63730010	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP2K1	5604	hgsc.bcm.edu	36	15	64522682	64522682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SKOR1	0	hgsc.bcm.edu	36	15	65905486	65905486	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CORO2B	10391	hgsc.bcm.edu	36	15	66724715	66724715	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UACA	55075	hgsc.bcm.edu	36	15	68747717	68747717	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADPGK	83440	hgsc.bcm.edu	36	15	70832216	70832216	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C15orf59	388135	hgsc.bcm.edu	36	15	71819404	71819404	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CYP11A1	1583	hgsc.bcm.edu	36	15	72423376	72423376	+	Silent	SNP	G	G	A	rs6160	byCluster;byHapMap	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLK3	1198	hgsc.bcm.edu	36	15	72708064	72708064	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCAPER	49855	hgsc.bcm.edu	36	15	74745061	74745061	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCAPER	49855	hgsc.bcm.edu	36	15	74812672	74812672	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ST20-MTHFS	0	hgsc.bcm.edu	36	15	77924744	77924744	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1199	57214	hgsc.bcm.edu	36	15	79004047	79004047	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMC3	342125	hgsc.bcm.edu	36	15	79414295	79414295	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AP3B2	8120	hgsc.bcm.edu	36	15	81131361	81131361	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTSL3	57188	hgsc.bcm.edu	36	15	82485033	82485033	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACAN	176	hgsc.bcm.edu	36	15	87183110	87183110	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACAN	176	hgsc.bcm.edu	36	15	87193869	87193869	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HAPLN3	145864	hgsc.bcm.edu	36	15	87225657	87225657	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RLBP1	6017	hgsc.bcm.edu	36	15	87561541	87561541	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POLG	5428	hgsc.bcm.edu	36	15	87665057	87665057	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C15orf42	90381	hgsc.bcm.edu	36	15	87969266	87969266	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C15orf58	390637	hgsc.bcm.edu	36	15	88586072	88586072	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FURIN	5045	hgsc.bcm.edu	36	15	89225623	89225623	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FURIN	5045	hgsc.bcm.edu	36	15	89225650	89225650	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FES	2242	hgsc.bcm.edu	36	15	89231456	89231456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FES	2242	hgsc.bcm.edu	36	15	89237975	89237975	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLCO3A1	28232	hgsc.bcm.edu	36	15	90260290	90260290	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ST8SIA2	8128	hgsc.bcm.edu	36	15	90808566	90808566	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHSY1	22856	hgsc.bcm.edu	36	15	99536273	99536273	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NLGN4X	57502	hgsc.bcm.edu	36	X	5821021	5821021	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHROOM2	357	hgsc.bcm.edu	36	X	9822711	9822711	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TLR8	51311	hgsc.bcm.edu	36	X	12848528	12848528	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIGA	5277	hgsc.bcm.edu	36	X	15259550	15259550	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FIGF	2277	hgsc.bcm.edu	36	X	15286082	15286082	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDKL5	6792	hgsc.bcm.edu	36	X	18581567	18581567	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHKA2	5256	hgsc.bcm.edu	36	X	18880569	18880569	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDHA1	5160	hgsc.bcm.edu	36	X	19277364	19277364	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDHA1	5160	hgsc.bcm.edu	36	X	19282604	19282604	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SH3KBP1	30011	hgsc.bcm.edu	36	X	19497195	19497195	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RPS6KA3	6197	hgsc.bcm.edu	36	X	20095635	20095635	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHEX	5251	hgsc.bcm.edu	36	X	22022031	22022031	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTCHD1	139411	hgsc.bcm.edu	36	X	23321293	23321293	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTCHD1	139411	hgsc.bcm.edu	36	X	23321780	23321780	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFX	7543	hgsc.bcm.edu	36	X	24136964	24136964	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM47B	170062	hgsc.bcm.edu	36	X	34870924	34870924	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CXorf30	645090	hgsc.bcm.edu	36	X	36295023	36295023	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM47C	442444	hgsc.bcm.edu	36	X	36938177	36938177	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRPX	8406	hgsc.bcm.edu	36	X	37916213	37916213	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSPAN7	7102	hgsc.bcm.edu	36	X	38415584	38415584	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP6AP2	10159	hgsc.bcm.edu	36	X	40333277	40333277	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP9X	8239	hgsc.bcm.edu	36	X	40940543	40940543	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDX3X	1654	hgsc.bcm.edu	36	X	41086769	41086769	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CASK	8573	hgsc.bcm.edu	36	X	41370887	41370887	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NDP	4693	hgsc.bcm.edu	36	X	43702770	43702770	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EFHC2	80258	hgsc.bcm.edu	36	X	43986405	43986405	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP11	8237	hgsc.bcm.edu	36	X	46988877	46988877	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARAF	369	hgsc.bcm.edu	36	X	47311655	47311655	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FTSJ1	24140	hgsc.bcm.edu	36	X	48225821	48225821	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HDAC6	10013	hgsc.bcm.edu	36	X	48563542	48563542	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDR45	11152	hgsc.bcm.edu	36	X	48820220	48820220	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DGKK	139189	hgsc.bcm.edu	36	X	50163284	50163284	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DGKK	139189	hgsc.bcm.edu	36	X	50230093	50230093	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HUWE1	10075	hgsc.bcm.edu	36	X	53689099	53689099	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FGD1	2245	hgsc.bcm.edu	36	X	54499449	54499449	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP51	158880	hgsc.bcm.edu	36	X	55531982	55531982	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZXDB	158586	hgsc.bcm.edu	36	X	57636177	57636177	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM123B	139285	hgsc.bcm.edu	36	X	63328259	63328259	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VSIG4	11326	hgsc.bcm.edu	36	X	65170126	65170126	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AR	374	hgsc.bcm.edu	36	X	66682049	66682049	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXO4	4303	hgsc.bcm.edu	36	X	70233408	70233408	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGAG4	340526	hgsc.bcm.edu	36	X	71266816	71266816	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAGEE1	728239	hgsc.bcm.edu	36	X	75565080	75565080	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FGF16	8823	hgsc.bcm.edu	36	X	76596329	76596329	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATRX	546	hgsc.bcm.edu	36	X	76796288	76796288	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BRWD3	254065	hgsc.bcm.edu	36	X	79831937	79831937	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDH11X	83259	hgsc.bcm.edu	36	X	90977179	90977179	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDH11X	83259	hgsc.bcm.edu	36	X	91020899	91020899	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DRP2	1821	hgsc.bcm.edu	36	X	100383376	100383376	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPRASP1	9737	hgsc.bcm.edu	36	X	101795558	101795558	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAB40A	142684	hgsc.bcm.edu	36	X	102641758	102641758	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL1RAPL2	26280	hgsc.bcm.edu	36	X	104848058	104848058	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GUCY2F	2986	hgsc.bcm.edu	36	X	108538919	108538919	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGAG1	57529	hgsc.bcm.edu	36	X	109580542	109580542	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGAG1	57529	hgsc.bcm.edu	36	X	109581534	109581534	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALG13	79868	hgsc.bcm.edu	36	X	110858074	110858074	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALG13	79868	hgsc.bcm.edu	36	X	110874649	110874649	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBMXL3	139804	hgsc.bcm.edu	36	X	114330500	114330500	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1210	57481	hgsc.bcm.edu	36	X	118134629	118134629	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBE2A	7319	hgsc.bcm.edu	36	X	118601205	118601205	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NKAP	79576	hgsc.bcm.edu	36	X	118961532	118961532	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP1B4	23439	hgsc.bcm.edu	36	X	119396583	119396583	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CT47B1	643311	hgsc.bcm.edu	36	X	119892818	119892818	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GLUD2	2747	hgsc.bcm.edu	36	X	120010547	120010547	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRIA3	2892	hgsc.bcm.edu	36	X	122364589	122364589	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACTRT1	139741	hgsc.bcm.edu	36	X	127013435	127013435	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
XPNPEP2	7512	hgsc.bcm.edu	36	X	128724386	128724386	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZDHHC9	51114	hgsc.bcm.edu	36	X	128790675	128790675	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBMX2	51634	hgsc.bcm.edu	36	X	129370968	129370968	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR13H1	347468	hgsc.bcm.edu	36	X	130506143	130506143	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HS6ST2	90161	hgsc.bcm.edu	36	X	131918734	131918734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP7D3	79649	hgsc.bcm.edu	36	X	135154542	135154542	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MCF2	4168	hgsc.bcm.edu	36	X	138506524	138506524	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLITRK2	84631	hgsc.bcm.edu	36	X	144713310	144713310	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AFF2	2334	hgsc.bcm.edu	36	X	147551246	147551246	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM185A	84548	hgsc.bcm.edu	36	X	148498141	148498141	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAGEA11	4110	hgsc.bcm.edu	36	X	148576145	148576145	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAGEA11	4110	hgsc.bcm.edu	36	X	148579551	148579551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTMR1	8776	hgsc.bcm.edu	36	X	149651706	149651706	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRRG3	79057	hgsc.bcm.edu	36	X	150619934	150619934	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNGA2	1260	hgsc.bcm.edu	36	X	150662382	150662382	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NSDHL	50814	hgsc.bcm.edu	36	X	151785036	151785036	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BGN	633	hgsc.bcm.edu	36	X	152425575	152425575	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ABCD1	215	hgsc.bcm.edu	36	X	152662308	152662308	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDZD4	57595	hgsc.bcm.edu	36	X	152722427	152722427	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
F8	2157	hgsc.bcm.edu	36	X	153813001	153813001	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDE6B	5158	hgsc.bcm.edu	36	4	646372	646372	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FGFRL1	53834	hgsc.bcm.edu	36	4	1008846	1008846	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CRIPAK	285464	hgsc.bcm.edu	36	4	1379465	1379465	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LETM1	3954	hgsc.bcm.edu	36	4	1795263	1795263	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFYVE28	57732	hgsc.bcm.edu	36	4	2276769	2276769	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF4	6047	hgsc.bcm.edu	36	4	2484109	2484109	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CRMP1	1400	hgsc.bcm.edu	36	4	5881165	5881165	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC96	257236	hgsc.bcm.edu	36	4	7094873	7094873	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TADA2B	93624	hgsc.bcm.edu	36	4	7107593	7107593	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SH3TC1	54436	hgsc.bcm.edu	36	4	8275491	8275491	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR78	27201	hgsc.bcm.edu	36	4	8639693	8639693	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BST1	683	hgsc.bcm.edu	36	4	15316346	15316346	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MED28	80306	hgsc.bcm.edu	36	4	17234462	17234462	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM184B	27146	hgsc.bcm.edu	36	4	17299169	17299169	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LCORL	254251	hgsc.bcm.edu	36	4	17495268	17495268	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLIT2	9353	hgsc.bcm.edu	36	4	20228243	20228243	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR125	166647	hgsc.bcm.edu	36	4	22035005	22035005	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHX15	1665	hgsc.bcm.edu	36	4	24138708	24138708	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARAP2	116984	hgsc.bcm.edu	36	4	35811303	35811303	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHOX2B	8929	hgsc.bcm.edu	36	4	41445151	41445151	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GNPDA2	132789	hgsc.bcm.edu	36	4	44404603	44404603	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GABRB1	2560	hgsc.bcm.edu	36	4	47122601	47122601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TXK	7294	hgsc.bcm.edu	36	4	47809256	47809256	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC10A4	201780	hgsc.bcm.edu	36	4	48180634	48180634	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LNX1	84708	hgsc.bcm.edu	36	4	54134578	54134578	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GSX2	170825	hgsc.bcm.edu	36	4	54661518	54661518	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIT	3815	hgsc.bcm.edu	36	4	55288364	55288364	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIT	3815	hgsc.bcm.edu	36	4	55290352	55290352	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
YTHDC1	91746	hgsc.bcm.edu	36	4	68867041	68867041	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
YTHDC1	91746	hgsc.bcm.edu	36	4	68881707	68881707	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COX18	285521	hgsc.bcm.edu	36	4	74154090	74154090	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CXCL1	2919	hgsc.bcm.edu	36	4	74954339	74954339	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USO1	8615	hgsc.bcm.edu	36	4	76934078	76934078	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ART3	419	hgsc.bcm.edu	36	4	77222399	77222399	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PAQR3	152559	hgsc.bcm.edu	36	4	80066828	80066828	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NAA11	0	hgsc.bcm.edu	36	4	80465439	80465439	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRDM8	56978	hgsc.bcm.edu	36	4	81342276	81342276	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRKG2	5593	hgsc.bcm.edu	36	4	82275431	82275431	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDFY3	23001	hgsc.bcm.edu	36	4	85977115	85977115	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPN13	5783	hgsc.bcm.edu	36	4	87862457	87862457	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPP1	30827	hgsc.bcm.edu	36	4	89122711	89122711	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAP1GDS1	5910	hgsc.bcm.edu	36	4	99558843	99558843	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTTP	4571	hgsc.bcm.edu	36	4	100762862	100762862	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ENPEP	2028	hgsc.bcm.edu	36	4	111683461	111683461	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LARP7	51574	hgsc.bcm.edu	36	4	113787732	113787732	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARSJ	79642	hgsc.bcm.edu	36	4	115043401	115043401	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANXA5	308	hgsc.bcm.edu	36	4	122819043	122819043	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRPC3	7222	hgsc.bcm.edu	36	4	123073056	123073056	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1109	84162	hgsc.bcm.edu	36	4	123500227	123500227	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BBS12	166379	hgsc.bcm.edu	36	4	123883942	123883942	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD50	57182	hgsc.bcm.edu	36	4	125812885	125812885	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDH10	57575	hgsc.bcm.edu	36	4	134292128	134292128	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDH10	57575	hgsc.bcm.edu	36	4	134292225	134292225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAML3	55534	hgsc.bcm.edu	36	4	141030570	141030570	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBC1D9	23158	hgsc.bcm.edu	36	4	141774750	141774750	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBC1D9	23158	hgsc.bcm.edu	36	4	141809600	141809600	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMAD1	4086	hgsc.bcm.edu	36	4	146687386	146687386	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POU4F2	5458	hgsc.bcm.edu	36	4	147781348	147781348	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FHDC1	85462	hgsc.bcm.edu	36	4	154084111	154084111	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DCHS2	54798	hgsc.bcm.edu	36	4	155473551	155473551	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DCHS2	54798	hgsc.bcm.edu	36	4	155630955	155630955	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FGA	2243	hgsc.bcm.edu	36	4	155726825	155726825	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GUCY1B3	2983	hgsc.bcm.edu	36	4	156915600	156915600	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTSO	1519	hgsc.bcm.edu	36	4	157080129	157080129	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FSTL5	56884	hgsc.bcm.edu	36	4	162683292	162683292	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MARCH1	55016	hgsc.bcm.edu	36	4	164726437	164726437	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPOCK3	50859	hgsc.bcm.edu	36	4	167892678	167892678	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPOCK3	50859	hgsc.bcm.edu	36	4	168046871	168046871	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDX60L	91351	hgsc.bcm.edu	36	4	169553709	169553709	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLCN3	1182	hgsc.bcm.edu	36	4	170870914	170870914	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ASB5	140458	hgsc.bcm.edu	36	4	177373806	177373806	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC25A4	291	hgsc.bcm.edu	36	4	186303187	186303187	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PXDN	7837	hgsc.bcm.edu	36	2	1632029	1632029	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PXDN	7837	hgsc.bcm.edu	36	2	1632266	1632266	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYT1L	23040	hgsc.bcm.edu	36	2	1872242	1872242	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF144A	9781	hgsc.bcm.edu	36	2	7078115	7078115	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ASAP2	8853	hgsc.bcm.edu	36	2	9376155	9376155	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ASAP2	8853	hgsc.bcm.edu	36	2	9445909	9445909	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNF1	3754	hgsc.bcm.edu	36	2	10970436	10970436	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NTSR2	23620	hgsc.bcm.edu	36	2	11719796	11719796	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMC6	79677	hgsc.bcm.edu	36	2	17770089	17770089	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PFN4	375189	hgsc.bcm.edu	36	2	24198879	24198879	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POMC	5443	hgsc.bcm.edu	36	2	25237566	25237566	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF3C	3797	hgsc.bcm.edu	36	2	26032002	26032002	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF3C	3797	hgsc.bcm.edu	36	2	26058001	26058001	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM59B	150946	hgsc.bcm.edu	36	2	26260690	26260690	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C2orf53	339779	hgsc.bcm.edu	36	2	27214144	27214144	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CAD	1677	hgsc.bcm.edu	36	2	27298980	27298980	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GTF3C2	2976	hgsc.bcm.edu	36	2	27410076	27410076	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C2orf16	84226	hgsc.bcm.edu	36	2	27656166	27656166	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BRE	9577	hgsc.bcm.edu	36	2	27970988	27970988	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GALNT14	79623	hgsc.bcm.edu	36	2	31008453	31008453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CAPN14	440854	hgsc.bcm.edu	36	2	31265713	31265713	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
XDH	7498	hgsc.bcm.edu	36	2	31414120	31414120	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BIRC6	57448	hgsc.bcm.edu	36	2	32458824	32458824	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BIRC6	57448	hgsc.bcm.edu	36	2	32458826	32458826	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BIRC6	57448	hgsc.bcm.edu	36	2	32580408	32580408	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HEATR5B	54497	hgsc.bcm.edu	36	2	37084289	37084289	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGEF33	0	hgsc.bcm.edu	36	2	39017991	39017991	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EML4	27436	hgsc.bcm.edu	36	2	42363515	42363515	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DYNC2LI1	51626	hgsc.bcm.edu	36	2	43875152	43875152	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MSH2	4436	hgsc.bcm.edu	36	2	47490872	47490872	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NRXN1	9378	hgsc.bcm.edu	36	2	50002837	50002837	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PSME4	23198	hgsc.bcm.edu	36	2	54008121	54008121	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RTN4	57142	hgsc.bcm.edu	36	2	55054469	55054469	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C2orf63	130162	hgsc.bcm.edu	36	2	55303046	55303046	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMEK2	57223	hgsc.bcm.edu	36	2	55696124	55696124	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FANCL	55120	hgsc.bcm.edu	36	2	58312711	58312711	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ETAA1	54465	hgsc.bcm.edu	36	2	67490597	67490597	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PROKR1	10887	hgsc.bcm.edu	36	2	68726932	68726932	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MPHOSPH10	10199	hgsc.bcm.edu	36	2	71230016	71230016	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DYSF	8291	hgsc.bcm.edu	36	2	71592530	71592530	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPR	6869	hgsc.bcm.edu	36	2	72969038	72969038	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALMS1	7840	hgsc.bcm.edu	36	2	73505286	73505286	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALMS1	7840	hgsc.bcm.edu	36	2	73532716	73532716	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALMS1	7840	hgsc.bcm.edu	36	2	73681994	73681994	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NAT8	9027	hgsc.bcm.edu	36	2	73722015	73722015	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTHFD2	10797	hgsc.bcm.edu	36	2	74286521	74286521	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEMA4F	10505	hgsc.bcm.edu	36	2	74760578	74760578	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRTM4	80059	hgsc.bcm.edu	36	2	76829402	76829402	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTNNA2	1496	hgsc.bcm.edu	36	2	79990400	79990400	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH6	1768	hgsc.bcm.edu	36	2	84628203	84628203	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH6	1768	hgsc.bcm.edu	36	2	84686209	84686209	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH6	1768	hgsc.bcm.edu	36	2	84717869	84717869	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAH6	1768	hgsc.bcm.edu	36	2	84886374	84886374	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C2orf89	0	hgsc.bcm.edu	36	2	84904664	84904664	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
REEP1	65055	hgsc.bcm.edu	36	2	86332654	86332654	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMYD1	150572	hgsc.bcm.edu	36	2	88168502	88168502	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FER1L5	90342	hgsc.bcm.edu	36	2	96732696	96732696	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZAP70	7535	hgsc.bcm.edu	36	2	97708127	97708127	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDCL3	79031	hgsc.bcm.edu	36	2	100559343	100559343	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL18R1	8809	hgsc.bcm.edu	36	2	102354945	102354945	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MFSD9	84804	hgsc.bcm.edu	36	2	102701563	102701563	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MERTK	10461	hgsc.bcm.edu	36	2	112403582	112403582	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PSD4	23550	hgsc.bcm.edu	36	2	113660067	113660067	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GLI2	2736	hgsc.bcm.edu	36	2	121401445	121401445	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO7B	4648	hgsc.bcm.edu	36	2	128048081	128048081	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO7B	4648	hgsc.bcm.edu	36	2	128101084	128101084	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDR33	55339	hgsc.bcm.edu	36	2	128187669	128187669	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UGGT1	0	hgsc.bcm.edu	36	2	128634573	128634573	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HS6ST1	9394	hgsc.bcm.edu	36	2	128742297	128742297	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POTEF	728378	hgsc.bcm.edu	36	2	130549104	130549104	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC74B	91409	hgsc.bcm.edu	36	2	130618835	130618835	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POTEE	445582	hgsc.bcm.edu	36	2	131738016	131738016	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCKAP5	0	hgsc.bcm.edu	36	2	133199680	133199680	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LCT	3938	hgsc.bcm.edu	36	2	136282629	136282629	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRP1B	53353	hgsc.bcm.edu	36	2	141377058	141377058	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRP1B	53353	hgsc.bcm.edu	36	2	141523183	141523183	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPC2	26122	hgsc.bcm.edu	36	2	149235963	149235963	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF5C	3800	hgsc.bcm.edu	36	2	149576426	149576426	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NMI	9111	hgsc.bcm.edu	36	2	151840300	151840300	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNJ3	3760	hgsc.bcm.edu	36	2	155263538	155263538	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACVR1	90	hgsc.bcm.edu	36	2	158330850	158330850	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TANC1	85461	hgsc.bcm.edu	36	2	159790460	159790460	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBR1	10716	hgsc.bcm.edu	36	2	161981504	161981504	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCN2A	6326	hgsc.bcm.edu	36	2	165878405	165878405	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCN9A	6335	hgsc.bcm.edu	36	2	166793512	166793512	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCN9A	6335	hgsc.bcm.edu	36	2	166868036	166868036	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
XIRP2	129446	hgsc.bcm.edu	36	2	167807778	167807778	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LASS6	253782	hgsc.bcm.edu	36	2	169021208	169021208	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SP5	389058	hgsc.bcm.edu	36	2	171281659	171281659	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DLX1	1745	hgsc.bcm.edu	36	2	172661056	172661056	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WIPF1	7456	hgsc.bcm.edu	36	2	175145366	175145366	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AGPS	8540	hgsc.bcm.edu	36	2	178007352	178007352	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDE11A	50940	hgsc.bcm.edu	36	2	178393200	178393200	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179106224	179106224	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179136492	179136492	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179145969	179145969	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179149122	179149122	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179204091	179204091	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179206405	179206405	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179262848	179262848	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179283757	179283757	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179372550	179372550	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SESTD1	91404	hgsc.bcm.edu	36	2	179694890	179694890	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAJC10	54431	hgsc.bcm.edu	36	2	183329360	183329360	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OSGEPL1	64172	hgsc.bcm.edu	36	2	190325914	190325914	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD44	91526	hgsc.bcm.edu	36	2	197698816	197698816	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLCL1	5334	hgsc.bcm.edu	36	2	198657044	198657044	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPATS2L	26010	hgsc.bcm.edu	36	2	201013661	201013661	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CASP8	841	hgsc.bcm.edu	36	2	201857878	201857878	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STRADB	55437	hgsc.bcm.edu	36	2	202050697	202050697	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PARD3B	117583	hgsc.bcm.edu	36	2	205749544	205749544	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PARD3B	117583	hgsc.bcm.edu	36	2	206013635	206013635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NRP2	8828	hgsc.bcm.edu	36	2	206316362	206316362	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MDH1B	130752	hgsc.bcm.edu	36	2	207322086	207322086	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP2	10988	hgsc.bcm.edu	36	2	210268636	210268636	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FN1	2335	hgsc.bcm.edu	36	2	215956419	215956419	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF142	7701	hgsc.bcm.edu	36	2	219216161	219216161	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FEV	54738	hgsc.bcm.edu	36	2	219554976	219554976	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM198	130612	hgsc.bcm.edu	36	2	220122139	220122139	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IRS1	3667	hgsc.bcm.edu	36	2	227368348	227368348	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRIP12	9320	hgsc.bcm.edu	36	2	230344563	230344563	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C2orf82	389084	hgsc.bcm.edu	36	2	233443358	233443358	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NEU2	4759	hgsc.bcm.edu	36	2	233605785	233605785	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NEU2	4759	hgsc.bcm.edu	36	2	233607818	233607818	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP40	55230	hgsc.bcm.edu	36	2	234059215	234059215	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HJURP	55355	hgsc.bcm.edu	36	2	234414088	234414088	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRPM8	79054	hgsc.bcm.edu	36	2	234519325	234519325	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SH3BP4	23677	hgsc.bcm.edu	36	2	235615830	235615830	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL6A3	1293	hgsc.bcm.edu	36	2	237914420	237914420	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL6A3	1293	hgsc.bcm.edu	36	2	237961303	237961303	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PER2	8864	hgsc.bcm.edu	36	2	238829079	238829079	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PER2	8864	hgsc.bcm.edu	36	2	238850556	238850556	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SNED1	25992	hgsc.bcm.edu	36	2	241640172	241640172	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KANK1	23189	hgsc.bcm.edu	36	9	703155	703155	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMARCA2	6595	hgsc.bcm.edu	36	9	2151816	2151816	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC24A2	123041	hgsc.bcm.edu	36	9	19518054	19518054	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1797	54914	hgsc.bcm.edu	36	9	20875183	20875183	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NOL6	65083	hgsc.bcm.edu	36	9	33457448	33457448	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNAI1	27019	hgsc.bcm.edu	36	9	34507412	34507412	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL11RA	3590	hgsc.bcm.edu	36	9	34649879	34649879	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIGO	84720	hgsc.bcm.edu	36	9	35080275	35080275	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGP1	400966	hgsc.bcm.edu	36	9	35740898	35740898	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RECK	8434	hgsc.bcm.edu	36	9	36102444	36102444	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHB	6461	hgsc.bcm.edu	36	9	37946019	37946019	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD18A	253650	hgsc.bcm.edu	36	9	38605687	38605687	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNTNAP3	79937	hgsc.bcm.edu	36	9	39139966	39139966	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNTNAP3	79937	hgsc.bcm.edu	36	9	39167419	39167419	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
APBA1	320	hgsc.bcm.edu	36	9	71321571	71321571	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRPM3	80036	hgsc.bcm.edu	36	9	72340723	72340723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRPM3	80036	hgsc.bcm.edu	36	9	72651321	72651321	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM75D3	0	hgsc.bcm.edu	36	9	83752633	83752633	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GKAP1	80318	hgsc.bcm.edu	36	9	85585117	85585117	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NTRK2	4915	hgsc.bcm.edu	36	9	86528362	86528362	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ISCA1	81689	hgsc.bcm.edu	36	9	88076751	88076751	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM75C1	441452	hgsc.bcm.edu	36	9	89725387	89725387	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
S1PR3	1903	hgsc.bcm.edu	36	9	90806744	90806744	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEMA4D	10507	hgsc.bcm.edu	36	9	91168551	91168551	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WNK2	65268	hgsc.bcm.edu	36	9	95100005	95100005	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF510	22869	hgsc.bcm.edu	36	9	98561119	98561119	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TDRD7	23424	hgsc.bcm.edu	36	9	99262824	99262824	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TGFBR1	7046	hgsc.bcm.edu	36	9	100944681	100944681	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF462	58499	hgsc.bcm.edu	36	9	108726641	108726641	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IKBKAP	8518	hgsc.bcm.edu	36	9	110681602	110681602	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF483	158399	hgsc.bcm.edu	36	9	113335892	113335892	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNC	7134	hgsc.bcm.edu	36	9	116888519	116888519	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LHX6	26468	hgsc.bcm.edu	36	9	124019341	124019341	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RABGAP1	23637	hgsc.bcm.edu	36	9	124817692	124817692	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR144	347088	hgsc.bcm.edu	36	9	126256138	126256138	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PBX3	5090	hgsc.bcm.edu	36	9	127549640	127549640	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANGPTL2	51129	hgsc.bcm.edu	36	9	128910585	128910585	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC2A8	29988	hgsc.bcm.edu	36	9	129207077	129207077	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTC16	158248	hgsc.bcm.edu	36	9	129525275	129525275	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDK9	1025	hgsc.bcm.edu	36	9	129591305	129591305	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC25A25	114789	hgsc.bcm.edu	36	9	129909417	129909417	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PKN3	29941	hgsc.bcm.edu	36	9	130521925	130521925	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZER1	10444	hgsc.bcm.edu	36	9	130543665	130543665	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ABL1	25	hgsc.bcm.edu	36	9	132750251	132750251	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NUP214	8021	hgsc.bcm.edu	36	9	133011355	133011355	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRRC2B	0	hgsc.bcm.edu	36	9	133311762	133311762	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRRC2B	0	hgsc.bcm.edu	36	9	133338882	133338882	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NTNG2	84628	hgsc.bcm.edu	36	9	134032211	134032211	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AK8	0	hgsc.bcm.edu	36	9	134590914	134590914	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GBGT1	26301	hgsc.bcm.edu	36	9	135019095	135019095	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C9orf7	11094	hgsc.bcm.edu	36	9	135322893	135322893	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RXRA	6256	hgsc.bcm.edu	36	9	136439861	136439861	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL5A1	1289	hgsc.bcm.edu	36	9	136782224	136782224	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL5A1	1289	hgsc.bcm.edu	36	9	136846487	136846487	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CAMSAP1	157922	hgsc.bcm.edu	36	9	137854485	137854485	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NOTCH1	4851	hgsc.bcm.edu	36	9	138529859	138529859	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GJA3	2700	hgsc.bcm.edu	36	13	19614957	19614957	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZDHHC20	253832	hgsc.bcm.edu	36	13	20897792	20897792	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PARP4	143	hgsc.bcm.edu	36	13	23975850	23975850	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP12A	479	hgsc.bcm.edu	36	13	24166586	24166586	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP12A	479	hgsc.bcm.edu	36	13	24172946	24172946	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTUS2	0	hgsc.bcm.edu	36	13	28497047	28497047	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HSPH1	10808	hgsc.bcm.edu	36	13	30617836	30617836	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RXFP2	122042	hgsc.bcm.edu	36	13	31264915	31264915	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RXFP2	122042	hgsc.bcm.edu	36	13	31265214	31265214	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FRY	10129	hgsc.bcm.edu	36	13	31767530	31767530	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDS5B	23047	hgsc.bcm.edu	36	13	32148000	32148000	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NBEA	26960	hgsc.bcm.edu	36	13	35056080	35056080	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NBEA	26960	hgsc.bcm.edu	36	13	35140544	35140544	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C13orf38	728591	hgsc.bcm.edu	36	13	35769781	35769781	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM48A	55578	hgsc.bcm.edu	36	13	36498350	36498350	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FREM2	341640	hgsc.bcm.edu	36	13	38256827	38256827	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXO1	2308	hgsc.bcm.edu	36	13	40032254	40032254	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WBP4	11193	hgsc.bcm.edu	36	13	40552813	40552813	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRCH1	23143	hgsc.bcm.edu	36	13	46213954	46213954	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FNDC3A	22862	hgsc.bcm.edu	36	13	48658217	48658217	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDH20	64881	hgsc.bcm.edu	36	13	60887220	60887220	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHL1	57626	hgsc.bcm.edu	36	13	69354486	69354486	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHL1	57626	hgsc.bcm.edu	36	13	69433569	69433569	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYCBP2	23077	hgsc.bcm.edu	36	13	76555197	76555197	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYCBP2	23077	hgsc.bcm.edu	36	13	76760315	76760315	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPC5	2262	hgsc.bcm.edu	36	13	91143776	91143776	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPC5	2262	hgsc.bcm.edu	36	13	91178902	91178902	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UGGT2	0	hgsc.bcm.edu	36	13	95306519	95306519	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DOCK9	23348	hgsc.bcm.edu	36	13	98330814	98330814	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
A2LD1	87769	hgsc.bcm.edu	36	13	99982621	99982621	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C13orf40	0	hgsc.bcm.edu	36	13	102189401	102189401	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BIVM	54841	hgsc.bcm.edu	36	13	102257683	102257683	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERCC5	2073	hgsc.bcm.edu	36	13	102323687	102323687	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM155A	728215	hgsc.bcm.edu	36	13	107316820	107316820	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL4A2	1284	hgsc.bcm.edu	36	13	109956884	109956884	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CARS2	79587	hgsc.bcm.edu	36	13	110138314	110138314	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ING1	3621	hgsc.bcm.edu	36	13	110170097	110170097	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C13orf35	400165	hgsc.bcm.edu	36	13	112381860	112381860	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATP11A	23250	hgsc.bcm.edu	36	13	112584154	112584154	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
F10	83541	hgsc.bcm.edu	36	13	112831838	112831838	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PFKP	5214	hgsc.bcm.edu	36	10	3144433	3144433	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PITRM1	10531	hgsc.bcm.edu	36	10	3179407	3179407	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AKR1E2	0	hgsc.bcm.edu	36	10	4863014	4863014	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CUBN	8029	hgsc.bcm.edu	36	10	17066116	17066116	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ST8SIA6	338596	hgsc.bcm.edu	36	10	17403206	17403206	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPLA	9200	hgsc.bcm.edu	36	10	17676383	17676383	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C10orf67	256815	hgsc.bcm.edu	36	10	23673558	23673558	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARMC4	55130	hgsc.bcm.edu	36	10	28312845	28312845	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTPAP	55149	hgsc.bcm.edu	36	10	30665765	30665765	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF33A	7581	hgsc.bcm.edu	36	10	38383768	38383768	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF33A	7581	hgsc.bcm.edu	36	10	38384012	38384012	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF37A	7587	hgsc.bcm.edu	36	10	38446857	38446857	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF33B	7582	hgsc.bcm.edu	36	10	42409681	42409681	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BMS1	9790	hgsc.bcm.edu	36	10	42638719	42638719	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RASSF4	83937	hgsc.bcm.edu	36	10	44797995	44797995	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPRIN2	9721	hgsc.bcm.edu	36	10	46418904	46418904	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANXA8L2	244	hgsc.bcm.edu	36	10	47224741	47224741	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDFY4	57705	hgsc.bcm.edu	36	10	49656775	49656775	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDFY4	57705	hgsc.bcm.edu	36	10	49775530	49775530	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PGBD3	267004	hgsc.bcm.edu	36	10	50393924	50393924	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OGDHL	55753	hgsc.bcm.edu	36	10	50614460	50614460	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SGMS1	259230	hgsc.bcm.edu	36	10	51773599	51773599	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANK3	288	hgsc.bcm.edu	36	10	61596641	61596641	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARID5B	84159	hgsc.bcm.edu	36	10	63521317	63521317	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RTKN2	219790	hgsc.bcm.edu	36	10	63629615	63629615	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYPN	84665	hgsc.bcm.edu	36	10	69596159	69596159	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYPN	84665	hgsc.bcm.edu	36	10	69640167	69640167	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDX21	54606	hgsc.bcm.edu	36	10	70396785	70396785	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDH23	64072	hgsc.bcm.edu	36	10	73076391	73076391	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDH23	64072	hgsc.bcm.edu	36	10	73131956	73131956	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPOCK2	9806	hgsc.bcm.edu	36	10	73496779	73496779	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNPO2L	79933	hgsc.bcm.edu	36	10	75078408	75078408	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEC24C	9632	hgsc.bcm.edu	36	10	75198793	75198793	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYST4	23522	hgsc.bcm.edu	36	10	76273187	76273187	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DUPD1	338599	hgsc.bcm.edu	36	10	76467682	76467682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POLR3A	11128	hgsc.bcm.edu	36	10	79412048	79412048	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MMRN2	79812	hgsc.bcm.edu	36	10	88692362	88692362	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNLS	55328	hgsc.bcm.edu	36	10	90112323	90112323	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IFIT2	3433	hgsc.bcm.edu	36	10	91056504	91056504	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HTR7	3363	hgsc.bcm.edu	36	10	92498752	92498752	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HTR7	3363	hgsc.bcm.edu	36	10	92607238	92607238	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IDE	3416	hgsc.bcm.edu	36	10	94218678	94218678	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIK3AP1	118788	hgsc.bcm.edu	36	10	98370234	98370234	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLIT1	6586	hgsc.bcm.edu	36	10	98753831	98753831	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLIT1	6586	hgsc.bcm.edu	36	10	98914590	98914590	+	Missense_Mutation	SNP	G	G	A	rs41307074	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP19	84986	hgsc.bcm.edu	36	10	99015829	99015829	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HOGA1	0	hgsc.bcm.edu	36	10	99348890	99348890	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COX15	1355	hgsc.bcm.edu	36	10	101476848	101476848	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KAZALD1	81621	hgsc.bcm.edu	36	10	102814341	102814341	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NT5C2	22978	hgsc.bcm.edu	36	10	104840455	104840455	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SORCS3	22986	hgsc.bcm.edu	36	10	106592553	106592553	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
XPNPEP1	7511	hgsc.bcm.edu	36	10	111641509	111641509	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADRA2A	150	hgsc.bcm.edu	36	10	112828320	112828320	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDZD8	118987	hgsc.bcm.edu	36	10	119033319	119033319	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRLHR	2834	hgsc.bcm.edu	36	10	120343707	120343707	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDR11	55717	hgsc.bcm.edu	36	10	122640296	122640296	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DMBT1	1755	hgsc.bcm.edu	36	10	124367634	124367634	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CUZD1	50624	hgsc.bcm.edu	36	10	124587020	124587020	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IKZF5	64376	hgsc.bcm.edu	36	10	124744076	124744076	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR26	2849	hgsc.bcm.edu	36	10	125424394	125424394	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DOCK1	1793	hgsc.bcm.edu	36	10	128725986	128725986	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRC27	80313	hgsc.bcm.edu	36	10	134012520	134012520	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KNDC1	85442	hgsc.bcm.edu	36	10	134847417	134847417	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC9A3	6550	hgsc.bcm.edu	36	5	530499	530499	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FASTKD3	79072	hgsc.bcm.edu	36	5	7916064	7916064	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEMA5A	9037	hgsc.bcm.edu	36	5	9107362	9107362	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRDM9	56979	hgsc.bcm.edu	36	5	23562965	23562965	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDH9	1007	hgsc.bcm.edu	36	5	27024078	27024078	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTS12	81792	hgsc.bcm.edu	36	5	33612501	33612501	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTS12	81792	hgsc.bcm.edu	36	5	33631884	33631884	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RXFP3	51289	hgsc.bcm.edu	36	5	33973208	33973208	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UGT3A2	167127	hgsc.bcm.edu	36	5	36073758	36073758	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FYB	2533	hgsc.bcm.edu	36	5	39155451	39155451	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C6	5688	hgsc.bcm.edu	36	5	41239086	41239086	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHX29	54505	hgsc.bcm.edu	36	5	54599351	54599351	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SKIV2L2	23517	hgsc.bcm.edu	36	5	54731830	54731830	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PDE4D	5144	hgsc.bcm.edu	36	5	58547424	58547424	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTS6	11174	hgsc.bcm.edu	36	5	64802593	64802593	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAST4	375449	hgsc.bcm.edu	36	5	66432161	66432161	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAST4	375449	hgsc.bcm.edu	36	5	66495101	66495101	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAST4	375449	hgsc.bcm.edu	36	5	66497842	66497842	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RAD17	5884	hgsc.bcm.edu	36	5	68745786	68745786	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM169A	26049	hgsc.bcm.edu	36	5	74166084	74166084	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OTP	23440	hgsc.bcm.edu	36	5	76968783	76968783	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CMYA5	202333	hgsc.bcm.edu	36	5	79125022	79125022	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR98	84059	hgsc.bcm.edu	36	5	90028620	90028620	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR98	84059	hgsc.bcm.edu	36	5	90433811	90433811	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR98	84059	hgsc.bcm.edu	36	5	90481719	90481719	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NR2F1	7025	hgsc.bcm.edu	36	5	92949848	92949848	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LNPEP	4012	hgsc.bcm.edu	36	5	96367957	96367957	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RIOK2	55781	hgsc.bcm.edu	36	5	96532703	96532703	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGMB	285704	hgsc.bcm.edu	36	5	98156802	98156802	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ST8SIA4	7903	hgsc.bcm.edu	36	5	100219914	100219914	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPB41L4A	64097	hgsc.bcm.edu	36	5	111568058	111568058	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPB41L4A	64097	hgsc.bcm.edu	36	5	111671057	111671057	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSSK1B	83942	hgsc.bcm.edu	36	5	112798427	112798427	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CSNK1G3	1456	hgsc.bcm.edu	36	5	122921092	122921092	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FBN2	2201	hgsc.bcm.edu	36	5	127669214	127669214	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL4	3565	hgsc.bcm.edu	36	5	132043474	132043474	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FSTL4	23105	hgsc.bcm.edu	36	5	132613112	132613112	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NEUROG1	4762	hgsc.bcm.edu	36	5	134899029	134899029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL9	3578	hgsc.bcm.edu	36	5	135259146	135259146	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC4A9	83697	hgsc.bcm.edu	36	5	139724297	139724297	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKHD1	54882	hgsc.bcm.edu	36	5	139867707	139867707	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDR55	54853	hgsc.bcm.edu	36	5	140028930	140028930	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHA2	56146	hgsc.bcm.edu	36	5	140156966	140156966	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHA8	56140	hgsc.bcm.edu	36	5	140201365	140201365	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB2	56133	hgsc.bcm.edu	36	5	140455123	140455123	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB2	56133	hgsc.bcm.edu	36	5	140456160	140456160	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB3	56132	hgsc.bcm.edu	36	5	140462562	140462562	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB4	56131	hgsc.bcm.edu	36	5	140483732	140483732	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB5	26167	hgsc.bcm.edu	36	5	140496664	140496664	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB5	26167	hgsc.bcm.edu	36	5	140496823	140496823	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB10	56126	hgsc.bcm.edu	36	5	140553785	140553785	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB12	56124	hgsc.bcm.edu	36	5	140570304	140570304	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHB15	56121	hgsc.bcm.edu	36	5	140607040	140607040	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGA3	56112	hgsc.bcm.edu	36	5	140706067	140706067	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGA4	56111	hgsc.bcm.edu	36	5	140716860	140716860	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGB2	56103	hgsc.bcm.edu	36	5	140721413	140721413	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGA6	56109	hgsc.bcm.edu	36	5	140735723	140735723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGA7	56108	hgsc.bcm.edu	36	5	140744017	140744017	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGA8	9708	hgsc.bcm.edu	36	5	140754164	140754164	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGC4	56098	hgsc.bcm.edu	36	5	140845596	140845596	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGC5	56097	hgsc.bcm.edu	36	5	140850643	140850643	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FCHSD1	89848	hgsc.bcm.edu	36	5	141007801	141007801	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARAP3	64411	hgsc.bcm.edu	36	5	141031962	141031962	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAT2	2196	hgsc.bcm.edu	36	5	150894207	150894207	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAT2	2196	hgsc.bcm.edu	36	5	150925768	150925768	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM71B	153745	hgsc.bcm.edu	36	5	156522045	156522045	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITK	3702	hgsc.bcm.edu	36	5	156540651	156540651	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITK	3702	hgsc.bcm.edu	36	5	156582532	156582532	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CYFIP2	26999	hgsc.bcm.edu	36	5	156645024	156645024	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NIPAL4	348938	hgsc.bcm.edu	36	5	156832434	156832434	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAM19	8728	hgsc.bcm.edu	36	5	156847937	156847937	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLINT1	9685	hgsc.bcm.edu	36	5	157172735	157172735	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EBF1	1879	hgsc.bcm.edu	36	5	158071894	158071894	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GABRA1	2554	hgsc.bcm.edu	36	5	161232879	161232879	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAT2B	27430	hgsc.bcm.edu	36	5	162876162	162876162	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DOCK2	1794	hgsc.bcm.edu	36	5	169409882	169409882	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DOCK2	1794	hgsc.bcm.edu	36	5	169439771	169439771	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXI1	2299	hgsc.bcm.edu	36	5	169465583	169465583	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXI1	2299	hgsc.bcm.edu	36	5	169465659	169465659	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXI1	2299	hgsc.bcm.edu	36	5	169465820	169465820	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LCP2	3937	hgsc.bcm.edu	36	5	169612789	169612789	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TLX3	30012	hgsc.bcm.edu	36	5	170671050	170671050	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DRD1	1812	hgsc.bcm.edu	36	5	174802033	174802033	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARL10	285598	hgsc.bcm.edu	36	5	175731384	175731384	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SNCB	6620	hgsc.bcm.edu	36	5	175989154	175989154	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSPAN17	26262	hgsc.bcm.edu	36	5	176014598	176014598	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HK3	84376	hgsc.bcm.edu	36	5	176249043	176249043	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UIMC1	51720	hgsc.bcm.edu	36	5	176328615	176328615	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDX41	51428	hgsc.bcm.edu	36	5	176871466	176871466	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBC1D9B	23061	hgsc.bcm.edu	36	5	179223411	179223411	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BTNL9	153579	hgsc.bcm.edu	36	5	180419258	180419258	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM106B	54664	hgsc.bcm.edu	36	7	12236539	12236539	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MGAM	8972	hgsc.bcm.edu	36	7	141374006	141374006	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF512B	57473	hgsc.bcm.edu	36	20	62065711	62065711	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PPP1R12C	54776	hgsc.bcm.edu	36	19	60296049	60296049	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIWIL2	55124	hgsc.bcm.edu	36	8	22219384	22219384	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ESRP1	54845	hgsc.bcm.edu	36	8	95755711	95755711	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DAGLA	747	hgsc.bcm.edu	36	11	61244726	61244726	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MACROD1	28992	hgsc.bcm.edu	36	11	63539330	63539330	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP42	0	hgsc.bcm.edu	36	11	100363534	100363534	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
A2M	2	hgsc.bcm.edu	36	12	9121207	9121207	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLASP1	23332	hgsc.bcm.edu	36	2	121931804	121931804	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGEF4	50649	hgsc.bcm.edu	36	2	131391543	131391543	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTLL10	254173	hgsc.bcm.edu	36	1	1106086	1106086	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLEKHG5	57449	hgsc.bcm.edu	36	1	6457702	6457704	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PARK7	11315	hgsc.bcm.edu	36	1	7948063	7948063	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RERE	473	hgsc.bcm.edu	36	1	8341111	8341112	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRDM2	7799	hgsc.bcm.edu	36	1	13981147	13981147	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KAZ	0	hgsc.bcm.edu	36	1	15255338	15255338	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLEKHM2	23207	hgsc.bcm.edu	36	1	15926266	15926266	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPEN	64783	hgsc.bcm.edu	36	1	16128470	16128470	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C1QA	712	hgsc.bcm.edu	36	1	22838016	22838016	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNKSR1	10256	hgsc.bcm.edu	36	1	26382898	26382898	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RCC1	1104	hgsc.bcm.edu	36	1	28728997	28728997	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPRU	10076	hgsc.bcm.edu	36	1	29502997	29502997	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB8A	653121	hgsc.bcm.edu	36	1	32831134	32831136	+	In_Frame_Del	DEL	TCA	TCA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TCA	TCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZMYM6	9204	hgsc.bcm.edu	36	1	35227061	35227061	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CYP4Z1	199974	hgsc.bcm.edu	36	1	47356178	47356178	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PODN	127435	hgsc.bcm.edu	36	1	53315965	53315965	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM48	55706	hgsc.bcm.edu	36	1	54064147	54064147	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRKAA2	5563	hgsc.bcm.edu	36	1	56929682	56929682	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NFIA	4774	hgsc.bcm.edu	36	1	61326673	61326673	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
INADL	10207	hgsc.bcm.edu	36	1	62026167	62026168	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RPE65	6121	hgsc.bcm.edu	36	1	68676518	68676519	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRIQ3	127255	hgsc.bcm.edu	36	1	74347801	74347801	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CRYZ	1429	hgsc.bcm.edu	36	1	74963078	74963079	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ASB17	127247	hgsc.bcm.edu	36	1	76160503	76160504	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM73A	374986	hgsc.bcm.edu	36	1	78111289	78111289	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDC7	8317	hgsc.bcm.edu	36	1	91739945	91739945	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HIAT1	64645	hgsc.bcm.edu	36	1	100306710	100306710	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPSM2	29899	hgsc.bcm.edu	36	1	109246033	109246033	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VANGL1	81839	hgsc.bcm.edu	36	1	116008109	116008109	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SV2A	9900	hgsc.bcm.edu	36	1	148151605	148151605	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ENSA	2029	hgsc.bcm.edu	36	1	148864792	148864793	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RFX5	5993	hgsc.bcm.edu	36	1	149585365	149585365	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DENND4B	9909	hgsc.bcm.edu	36	1	152172753	152172753	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NUP210L	91181	hgsc.bcm.edu	36	1	152232028	152232028	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SHC1	6464	hgsc.bcm.edu	36	1	153209534	153209535	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTC24	164118	hgsc.bcm.edu	36	1	154819464	154819465	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGEF11	9826	hgsc.bcm.edu	36	1	155173834	155173834	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR6P1	128366	hgsc.bcm.edu	36	1	156799923	156799923	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR10Z1	128368	hgsc.bcm.edu	36	1	156843110	156843111	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHDC9	126823	hgsc.bcm.edu	36	1	159335177	159335177	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAEL	84944	hgsc.bcm.edu	36	1	165225270	165225270	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CEP350	9857	hgsc.bcm.edu	36	1	178249755	178249755	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CEP350	9857	hgsc.bcm.edu	36	1	178331429	178331429	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CACNA1E	777	hgsc.bcm.edu	36	1	179946725	179946726	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF2	6045	hgsc.bcm.edu	36	1	183335969	183335969	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DENND1B	163486	hgsc.bcm.edu	36	1	195747561	195747562	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NR5A2	2494	hgsc.bcm.edu	36	1	198281197	198281197	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IGFN1	91156	hgsc.bcm.edu	36	1	199449977	199449977	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IKBKE	9641	hgsc.bcm.edu	36	1	204716686	204716687	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PFKFB2	5208	hgsc.bcm.edu	36	1	205294767	205294769	+	In_Frame_Del	DEL	TGT	TGT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TGT	TGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDR26	80232	hgsc.bcm.edu	36	1	222685861	222685863	+	In_Frame_Del	DEL	GAG	GAG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GAG	GAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OBSCN	84033	hgsc.bcm.edu	36	1	226626073	226626073	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
URB2	9816	hgsc.bcm.edu	36	1	227840268	227840270	+	In_Frame_Del	DEL	AGG	AGG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AGG	AGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SIPA1L2	57568	hgsc.bcm.edu	36	1	230682073	230682074	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KMO	8564	hgsc.bcm.edu	36	1	239790649	239790651	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR14C36	127066	hgsc.bcm.edu	36	1	246579007	246579007	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RRM2	6241	hgsc.bcm.edu	36	2	10180307	10180307	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EMILIN1	11117	hgsc.bcm.edu	36	2	27155442	27155442	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BIRC6	57448	hgsc.bcm.edu	36	2	32458816	32458817	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHX57	90957	hgsc.bcm.edu	36	2	38927689	38927689	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHX57	90957	hgsc.bcm.edu	36	2	38948927	38948932	+	In_Frame_Del	DEL	CCACCG	CCACCG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	CCACCG	CCACCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
THADA	63892	hgsc.bcm.edu	36	2	43653588	43653588	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRPPRC	10128	hgsc.bcm.edu	36	2	43998669	43998669	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MSH2	4436	hgsc.bcm.edu	36	2	47559095	47559097	+	In_Frame_Del	DEL	TAA	TAA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TAA	TAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MSH6	2956	hgsc.bcm.edu	36	2	47884144	47884144	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WBP1	23559	hgsc.bcm.edu	36	2	74540917	74540918	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VAMP5	10791	hgsc.bcm.edu	36	2	85673589	85673589	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD23	200539	hgsc.bcm.edu	36	2	96871548	96871548	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM178B	144360	hgsc.bcm.edu	36	2	97001591	97001591	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EIF5B	9669	hgsc.bcm.edu	36	2	99343237	99343237	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP4K4	9448	hgsc.bcm.edu	36	2	101850145	101850145	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MFSD9	84804	hgsc.bcm.edu	36	2	102701716	102701716	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGPD3	653489	hgsc.bcm.edu	36	2	106406535	106406535	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC35F5	80255	hgsc.bcm.edu	36	2	114216747	114216747	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPN4	5775	hgsc.bcm.edu	36	2	120355841	120355841	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERCC3	2071	hgsc.bcm.edu	36	2	127763414	127763416	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TCT	TCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MGAT5	4249	hgsc.bcm.edu	36	2	134823939	134823939	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACVR2A	92	hgsc.bcm.edu	36	2	148400144	148400146	+	In_Frame_Del	DEL	GTT	GTT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GTT	GTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACVR2A	92	hgsc.bcm.edu	36	2	148400156	148400156	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COBLL1	22837	hgsc.bcm.edu	36	2	165259542	165259542	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ABCB11	8647	hgsc.bcm.edu	36	2	169497190	169497190	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FASTKD1	79675	hgsc.bcm.edu	36	2	170136775	170136776	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTN	7273	hgsc.bcm.edu	36	2	179225259	179225259	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TFPI	7035	hgsc.bcm.edu	36	2	188069865	188069865	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BZW1	9689	hgsc.bcm.edu	36	2	201391750	201391750	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BMPR2	659	hgsc.bcm.edu	36	2	203128247	203128247	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALS2CR8	79800	hgsc.bcm.edu	36	2	203556553	203556553	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NBEAL1	65065	hgsc.bcm.edu	36	2	203630303	203630303	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZDBF2	57683	hgsc.bcm.edu	36	2	206877976	206877976	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYL1	4632	hgsc.bcm.edu	36	2	210888011	210888011	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC4A3	6508	hgsc.bcm.edu	36	2	220202362	220202362	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1486	57624	hgsc.bcm.edu	36	2	226155394	226155395	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRIP12	9320	hgsc.bcm.edu	36	2	230369559	230369559	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PSMD1	5707	hgsc.bcm.edu	36	2	231639924	231639924	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GIGYF2	26058	hgsc.bcm.edu	36	2	233384215	233384215	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AGAP1	116987	hgsc.bcm.edu	36	2	236318212	236318212	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OTOS	150677	hgsc.bcm.edu	36	2	240727346	240727346	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNTN6	27255	hgsc.bcm.edu	36	3	1346501	1346501	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNTN6	27255	hgsc.bcm.edu	36	3	1402450	1402450	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC6A1	6529	hgsc.bcm.edu	36	3	11034123	11034123	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FGD5	152273	hgsc.bcm.edu	36	3	14837328	14837329	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NR2C2	7182	hgsc.bcm.edu	36	3	15059410	15059410	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DAZL	1618	hgsc.bcm.edu	36	3	16614031	16614031	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SGOL1	151648	hgsc.bcm.edu	36	3	20177685	20177685	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SGOL1	151648	hgsc.bcm.edu	36	3	20191054	20191054	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EOMES	8320	hgsc.bcm.edu	36	3	27736706	27736707	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC22A13	9390	hgsc.bcm.edu	36	3	38291497	38291497	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NKTR	4820	hgsc.bcm.edu	36	3	42654768	42654768	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C3orf77	375337	hgsc.bcm.edu	36	3	44260887	44260887	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PTPN23	25930	hgsc.bcm.edu	36	3	47429403	47429403	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBM15B	29890	hgsc.bcm.edu	36	3	51406393	51406393	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PBRM1	55193	hgsc.bcm.edu	36	3	52572380	52572380	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FLNB	2317	hgsc.bcm.edu	36	3	58131480	58131480	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF717	100131827	hgsc.bcm.edu	36	3	75873500	75873501	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR5K4	403278	hgsc.bcm.edu	36	3	99556282	99556282	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PVRL3	25945	hgsc.bcm.edu	36	3	112273651	112273651	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC37	348807	hgsc.bcm.edu	36	3	127637903	127637905	+	In_Frame_Del	DEL	AGG	AGG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AGG	AGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHX36	170506	hgsc.bcm.edu	36	3	155515672	155515672	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP13	8975	hgsc.bcm.edu	36	3	180890774	180890775	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SENP5	205564	hgsc.bcm.edu	36	3	198111239	198111239	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HGFAC	3083	hgsc.bcm.edu	36	4	3415652	3415652	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NCAPG	64151	hgsc.bcm.edu	36	4	17445112	17445113	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TLR1	7096	hgsc.bcm.edu	36	4	38476638	38476638	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TLR6	10333	hgsc.bcm.edu	36	4	38505492	38505492	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GUF1	60558	hgsc.bcm.edu	36	4	44395372	44395372	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNGA1	1259	hgsc.bcm.edu	36	4	47633929	47633929	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SGCB	6443	hgsc.bcm.edu	36	4	52589761	52589761	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LPHN3	23284	hgsc.bcm.edu	36	4	62496480	62496481	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AFM	173	hgsc.bcm.edu	36	4	74566396	74566396	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDFY3	23001	hgsc.bcm.edu	36	4	85895477	85895477	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANK2	287	hgsc.bcm.edu	36	4	114190402	114190402	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANKRD50	57182	hgsc.bcm.edu	36	4	125810452	125810453	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHF17	79960	hgsc.bcm.edu	36	4	130002501	130002502	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NAA15	0	hgsc.bcm.edu	36	4	140510895	140510895	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GAB1	128869	hgsc.bcm.edu	36	4	144556232	144556233	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TLR2	7097	hgsc.bcm.edu	36	4	154844222	154844223	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C4orf43	55319	hgsc.bcm.edu	36	4	164647669	164647669	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPEF2	79925	hgsc.bcm.edu	36	5	35741651	35741651	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OSMR	9180	hgsc.bcm.edu	36	5	38959086	38959086	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MOCS2	4338	hgsc.bcm.edu	36	5	52438696	52438697	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLK2	10769	hgsc.bcm.edu	36	5	57788769	57788769	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF2A	3796	hgsc.bcm.edu	36	5	61712727	61712727	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DIMT1L	27292	hgsc.bcm.edu	36	5	61723786	61723786	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FCHO2	115548	hgsc.bcm.edu	36	5	72300085	72300085	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HEXB	3074	hgsc.bcm.edu	36	5	74052755	74052755	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MSH3	4437	hgsc.bcm.edu	36	5	80124341	80124341	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MCTP1	79772	hgsc.bcm.edu	36	5	94076334	94076334	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM81B	153643	hgsc.bcm.edu	36	5	94808068	94808068	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LNPEP	4012	hgsc.bcm.edu	36	5	96341005	96341005	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM232	0	hgsc.bcm.edu	36	5	109968804	109968804	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRFBP1	153443	hgsc.bcm.edu	36	5	121384028	121384029	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CEP120	153241	hgsc.bcm.edu	36	5	122748613	122748613	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FBN2	2201	hgsc.bcm.edu	36	5	127638209	127638210	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MATR3	9782	hgsc.bcm.edu	36	5	138671705	138671705	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHAC1	56135	hgsc.bcm.edu	36	5	140287671	140287671	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDHGA11	56105	hgsc.bcm.edu	36	5	140781286	140781287	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDH1	5097	hgsc.bcm.edu	36	5	141222998	141222999	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBM27	54439	hgsc.bcm.edu	36	5	145627513	145627513	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TCERG1	10915	hgsc.bcm.edu	36	5	145866916	145866916	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAT2	2196	hgsc.bcm.edu	36	5	150885645	150885645	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTS2	9509	hgsc.bcm.edu	36	5	178497390	178497391	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LOC221710	221710	hgsc.bcm.edu	36	6	11242642	11242643	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPLD1	2822	hgsc.bcm.edu	36	6	24544920	24544920	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HIST1H3B	8358	hgsc.bcm.edu	36	6	26140155	26140155	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PSORS1C1	170679	hgsc.bcm.edu	36	6	31214480	31214480	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HLA-DQA1	3117	hgsc.bcm.edu	36	6	32717217	32717219	+	In_Frame_Del	DEL	GGT	GGT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GGT	GGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGL2	5863	hgsc.bcm.edu	36	6	33371942	33371943	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ITPR3	3710	hgsc.bcm.edu	36	6	33768613	33768615	+	In_Frame_Del	DEL	AGG	AGG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AGG	AGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC26A8	116369	hgsc.bcm.edu	36	6	36020043	36020043	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CUL7	9820	hgsc.bcm.edu	36	6	43126744	43126746	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF318	24149	hgsc.bcm.edu	36	6	43415976	43415976	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TDRD6	221400	hgsc.bcm.edu	36	6	46768374	46768374	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TFAP2B	7021	hgsc.bcm.edu	36	6	50899249	50899249	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PKHD1	5314	hgsc.bcm.edu	36	6	51997933	51997933	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1009	22832	hgsc.bcm.edu	36	6	84952952	84952952	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF292	23036	hgsc.bcm.edu	36	6	88026570	88026571	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TT	TT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MDN1	23195	hgsc.bcm.edu	36	6	90472573	90472574	+	Frame_Shift_Del	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CASP8AP2	9994	hgsc.bcm.edu	36	6	90633112	90633112	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MCHR2	84539	hgsc.bcm.edu	36	6	100489079	100489079	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MCHR2	84539	hgsc.bcm.edu	36	6	100502555	100502555	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SIM1	6492	hgsc.bcm.edu	36	6	101003218	101003219	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CEP57L1	0	hgsc.bcm.edu	36	6	109587203	109587203	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WISP3	8838	hgsc.bcm.edu	36	6	112496127	112496127	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRDN	10345	hgsc.bcm.edu	36	6	123800908	123800908	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ECHDC1	55862	hgsc.bcm.edu	36	6	127652966	127652966	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C6orf174	387104	hgsc.bcm.edu	36	6	127845772	127845773	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AKAP7	9465	hgsc.bcm.edu	36	6	131522969	131522969	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC28A	25901	hgsc.bcm.edu	36	6	139139023	139139023	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UTRN	7402	hgsc.bcm.edu	36	6	144801672	144801673	+	Frame_Shift_Ins	INS	-	-	CC	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GRM1	2911	hgsc.bcm.edu	36	6	146392787	146392787	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NOX3	50508	hgsc.bcm.edu	36	6	155791732	155791732	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MAP3K4	4216	hgsc.bcm.edu	36	6	161389765	161389766	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
QKI	9444	hgsc.bcm.edu	36	6	163819910	163819910	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
INTS1	26173	hgsc.bcm.edu	36	7	1493601	1493601	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF216	54476	hgsc.bcm.edu	36	7	5731572	5731572	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MIOS	54468	hgsc.bcm.edu	36	7	7612138	7612139	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF679	168417	hgsc.bcm.edu	36	7	63364004	63364005	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GUSB	2990	hgsc.bcm.edu	36	7	65063426	65063426	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AUTS2	282553	hgsc.bcm.edu	36	7	69893579	69893579	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM60	85025	hgsc.bcm.edu	36	7	77261396	77261396	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C7orf63	79846	hgsc.bcm.edu	36	7	89767124	89767124	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZKSCAN1	7586	hgsc.bcm.edu	36	7	99469076	99469076	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FBXO24	26261	hgsc.bcm.edu	36	7	100025268	100025268	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC12A9	56996	hgsc.bcm.edu	36	7	100297426	100297426	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLL5	55904	hgsc.bcm.edu	36	7	104518926	104518927	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPR22	2845	hgsc.bcm.edu	36	7	106902794	106902794	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCAP29	55973	hgsc.bcm.edu	36	7	107021776	107021776	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LAMB4	22798	hgsc.bcm.edu	36	7	107451741	107451741	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CTTNBP2	83992	hgsc.bcm.edu	36	7	117211694	117211694	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCND2	3751	hgsc.bcm.edu	36	7	120169881	120169882	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WNT16	51384	hgsc.bcm.edu	36	7	120759115	120759115	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CADPS2	93664	hgsc.bcm.edu	36	7	121772922	121772922	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF148	378925	hgsc.bcm.edu	36	7	122129172	122129172	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPAM1	6677	hgsc.bcm.edu	36	7	123387076	123387077	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SND1	27044	hgsc.bcm.edu	36	7	127356484	127356484	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C7orf45	136263	hgsc.bcm.edu	36	7	129635016	129635016	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNKS	8658	hgsc.bcm.edu	36	8	9603350	9603350	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RP1L1	94137	hgsc.bcm.edu	36	8	10505091	10505096	+	In_Frame_Del	DEL	TCCTTC	TCCTTC	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TCCTTC	TCCTTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C8orf80	389643	hgsc.bcm.edu	36	8	27944695	27944695	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LEPROTL1	23484	hgsc.bcm.edu	36	8	30081383	30081383	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GSR	2936	hgsc.bcm.edu	36	8	30659015	30659015	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBXN8	7993	hgsc.bcm.edu	36	8	30730134	30730134	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAM32	203102	hgsc.bcm.edu	36	8	39187924	39187924	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRKDC	5591	hgsc.bcm.edu	36	8	48909352	48909352	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MRPL15	29088	hgsc.bcm.edu	36	8	55217849	55217849	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARFGEF1	10565	hgsc.bcm.edu	36	8	68346560	68346560	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CSMD3	114788	hgsc.bcm.edu	36	8	113310205	113310205	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CSMD3	114788	hgsc.bcm.edu	36	8	113395333	113395333	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HAS2	3037	hgsc.bcm.edu	36	8	122710604	122710604	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FLJ43860	389690	hgsc.bcm.edu	36	8	142575771	142575772	+	Frame_Shift_Ins	INS	-	-	GG	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EPPK1	83481	hgsc.bcm.edu	36	8	145013366	145013366	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DMRT1	1761	hgsc.bcm.edu	36	9	884146	884146	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERMP1	79956	hgsc.bcm.edu	36	9	5791292	5791292	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KLHL9	55958	hgsc.bcm.edu	36	9	21324424	21324427	+	Frame_Shift_Del	DEL	AAGA	AAGA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AAGA	AAGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAF1L	138474	hgsc.bcm.edu	36	9	32623025	32623025	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VPS13A	23230	hgsc.bcm.edu	36	9	79026039	79026039	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VPS13A	23230	hgsc.bcm.edu	36	9	79030669	79030669	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CEP78	84131	hgsc.bcm.edu	36	9	80044910	80044930	+	In_Frame_Del	DEL	GGATTTAACTATTCTAGCAAA	GGATTTAACTATTCTAGCAAA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GGATTTAACTATTCTAGCAAA	GGATTTAACTATTCTAGCAAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHF2	5253	hgsc.bcm.edu	36	9	95462433	95462433	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C9orf125	84302	hgsc.bcm.edu	36	9	103278901	103278901	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CYLC2	1539	hgsc.bcm.edu	36	9	104807360	104807360	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMC2	10592	hgsc.bcm.edu	36	9	105904239	105904239	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UGCG	7357	hgsc.bcm.edu	36	9	113735001	113735001	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFP37	7539	hgsc.bcm.edu	36	9	114846237	114846237	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GAPVD1	26130	hgsc.bcm.edu	36	9	127162695	127162695	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NAIF1	203245	hgsc.bcm.edu	36	9	129868884	129868884	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NUP214	8021	hgsc.bcm.edu	36	9	133062828	133062829	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TTF1	7270	hgsc.bcm.edu	36	9	134267194	134267194	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BRD3	8019	hgsc.bcm.edu	36	9	135908350	135908350	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0649	9858	hgsc.bcm.edu	36	9	137518864	137518864	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SEC16A	9919	hgsc.bcm.edu	36	9	138491639	138491640	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GATA3	2625	hgsc.bcm.edu	36	10	8155785	8155786	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DCLRE1C	64421	hgsc.bcm.edu	36	10	14990439	14990439	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NSUN6	221078	hgsc.bcm.edu	36	10	18874901	18874901	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP22	58504	hgsc.bcm.edu	36	10	49324493	49324493	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARHGAP22	58504	hgsc.bcm.edu	36	10	49331405	49331405	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PARG	8505	hgsc.bcm.edu	36	10	51033248	51033248	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BICC1	80114	hgsc.bcm.edu	36	10	60228983	60228983	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF365	22891	hgsc.bcm.edu	36	10	63829519	63829519	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNA2	1763	hgsc.bcm.edu	36	10	69852527	69852527	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDH23	64072	hgsc.bcm.edu	36	10	73123917	73123919	+	In_Frame_Del	DEL	CAC	CAC	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	CAC	CAC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0913	23053	hgsc.bcm.edu	36	10	75230469	75230470	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANXA11	311	hgsc.bcm.edu	36	10	81918858	81918858	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF20B	9585	hgsc.bcm.edu	36	10	91473747	91473747	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF518A	9849	hgsc.bcm.edu	36	10	97909382	97909383	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CNNM1	26507	hgsc.bcm.edu	36	10	101126873	101126873	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GBF1	80142	hgsc.bcm.edu	36	10	104131890	104131890	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
INA	9118	hgsc.bcm.edu	36	10	105038406	105038406	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL17A1	1308	hgsc.bcm.edu	36	10	105784449	105784449	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC147	159686	hgsc.bcm.edu	36	10	106150437	106150438	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GA	GA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EMX2	2018	hgsc.bcm.edu	36	10	119292928	119292930	+	In_Frame_Del	DEL	GCC	GCC	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GCC	GCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TACC2	10579	hgsc.bcm.edu	36	10	123834346	123834346	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C10orf88	80007	hgsc.bcm.edu	36	10	124701500	124701500	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UROS	7390	hgsc.bcm.edu	36	10	127473511	127473511	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TUBGCP2	10844	hgsc.bcm.edu	36	10	134961556	134961556	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IFITM5	387733	hgsc.bcm.edu	36	11	289405	289405	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR51E2	81285	hgsc.bcm.edu	36	11	4660051	4660051	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRIM5	85363	hgsc.bcm.edu	36	11	5643396	5643397	+	Frame_Shift_Del	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NAV2	89797	hgsc.bcm.edu	36	11	19870689	19870689	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ANO3	63982	hgsc.bcm.edu	36	11	26617321	26617321	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC73	493860	hgsc.bcm.edu	36	11	32594096	32594096	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
QSER1	79832	hgsc.bcm.edu	36	11	32954471	32954471	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LDLRAD3	143458	hgsc.bcm.edu	36	11	36207356	36207356	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRC4C	57689	hgsc.bcm.edu	36	11	40092734	40092734	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHF21A	51317	hgsc.bcm.edu	36	11	45912183	45912183	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNKS1BP1	85456	hgsc.bcm.edu	36	11	56837904	56837904	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM111A	63901	hgsc.bcm.edu	36	11	58676663	58676663	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC3A2	6520	hgsc.bcm.edu	36	11	62406105	62406105	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
STIP1	10963	hgsc.bcm.edu	36	11	63724047	63724049	+	In_Frame_Del	DEL	GGA	GGA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GGA	GGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MEN1	4221	hgsc.bcm.edu	36	11	64328669	64328669	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DKFZp761E198	91056	hgsc.bcm.edu	36	11	65302033	65302033	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KDM2A	22992	hgsc.bcm.edu	36	11	66774572	66774572	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NUMA1	4926	hgsc.bcm.edu	36	11	71396051	71396051	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMEM126B	55863	hgsc.bcm.edu	36	11	85020469	85020470	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATM	472	hgsc.bcm.edu	36	11	107603819	107603819	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CD3G	445347	hgsc.bcm.edu	36	11	117725793	117725793	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLL	4297	hgsc.bcm.edu	36	11	117849395	117849396	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR8D4	338662	hgsc.bcm.edu	36	11	123282652	123282652	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
JAM3	83700	hgsc.bcm.edu	36	11	133523678	133523678	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCNN1A	6337	hgsc.bcm.edu	36	12	6327346	6327346	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C1S	716	hgsc.bcm.edu	36	12	7043500	7043500	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLCO1A2	6579	hgsc.bcm.edu	36	12	21358860	21358860	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RECQL	5965	hgsc.bcm.edu	36	12	21535814	21535814	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF21A	55605	hgsc.bcm.edu	36	12	38020301	38020301	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRK2	120892	hgsc.bcm.edu	36	12	38958213	38958213	+	Frame_Shift_Del	DEL	A	A	-	rs35611877	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRK2	120892	hgsc.bcm.edu	36	12	39000136	39000137	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMBIM6	7009	hgsc.bcm.edu	36	12	48441768	48441770	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TCT	TCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KRT76	51350	hgsc.bcm.edu	36	12	51456894	51456894	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCBP2	5094	hgsc.bcm.edu	36	12	52144824	52144824	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR6C75	390323	hgsc.bcm.edu	36	12	54045753	54045753	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMARCC2	6601	hgsc.bcm.edu	36	12	54845380	54845380	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RDH16	8608	hgsc.bcm.edu	36	12	55632202	55632202	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MBD6	114785	hgsc.bcm.edu	36	12	56206342	56206342	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MBD6	114785	hgsc.bcm.edu	36	12	56207999	56207999	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IRAK3	11213	hgsc.bcm.edu	36	12	64897221	64897221	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRHDE	29953	hgsc.bcm.edu	36	12	70953446	70953446	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LRRIQ1	84125	hgsc.bcm.edu	36	12	83974166	83974166	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VEZT	55591	hgsc.bcm.edu	36	12	94175100	94175100	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BTBD11	121551	hgsc.bcm.edu	36	12	106461908	106461908	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CCDC64	92558	hgsc.bcm.edu	36	12	119015287	119015287	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KDM2B	84678	hgsc.bcm.edu	36	12	120503123	120503123	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VPS37B	79720	hgsc.bcm.edu	36	12	121917845	121917845	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SBNO1	55206	hgsc.bcm.edu	36	12	122360236	122360236	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIWIL1	9271	hgsc.bcm.edu	36	12	129411726	129411726	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ULK1	8408	hgsc.bcm.edu	36	12	130968019	130968019	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TPTE2	93492	hgsc.bcm.edu	36	13	18939394	18939394	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZMYM2	7750	hgsc.bcm.edu	36	13	19555094	19555094	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EFHA1	221154	hgsc.bcm.edu	36	13	20975129	20975129	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTUS2	0	hgsc.bcm.edu	36	13	28952449	28952451	+	In_Frame_Del	DEL	AGG	AGG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AGG	AGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FOXO1	2308	hgsc.bcm.edu	36	13	40032359	40032359	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KBTBD6	89890	hgsc.bcm.edu	36	13	40603321	40603322	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA0564	28984	hgsc.bcm.edu	36	13	41355527	41355527	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARGLU1	55082	hgsc.bcm.edu	36	13	105994414	105994416	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TTC	TTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UPF3A	65110	hgsc.bcm.edu	36	13	114075320	114075321	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR4K5	79317	hgsc.bcm.edu	36	14	19459134	19459134	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHD8	57680	hgsc.bcm.edu	36	14	20929015	20929016	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
JPH4	84502	hgsc.bcm.edu	36	14	23110276	23110276	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CPNE6	9362	hgsc.bcm.edu	36	14	23612615	23612616	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM179B	23116	hgsc.bcm.edu	36	14	44567226	44567226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FANCM	57697	hgsc.bcm.edu	36	14	44715705	44715705	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MDGA2	161357	hgsc.bcm.edu	36	14	46600521	46600521	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TXNDC16	57544	hgsc.bcm.edu	36	14	52055699	52055699	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPTB	6710	hgsc.bcm.edu	36	14	64315649	64315657	+	In_Frame_Del	DEL	TTGCACAGT	TTGCACAGT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TTGCACAGT	TTGCACAGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAM21	8747	hgsc.bcm.edu	36	14	69996013	69996014	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HEATR4	399671	hgsc.bcm.edu	36	14	73015111	73015111	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C14orf45	80127	hgsc.bcm.edu	36	14	73559498	73559498	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LTBP2	4054	hgsc.bcm.edu	36	14	74037360	74037360	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLH3	27030	hgsc.bcm.edu	36	14	74585550	74585553	+	Frame_Shift_Del	DEL	AGAA	AGAA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AGAA	AGAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C14orf4	64207	hgsc.bcm.edu	36	14	76561752	76561752	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FLRT2	23768	hgsc.bcm.edu	36	14	85159227	85159227	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1409	57578	hgsc.bcm.edu	36	14	93157803	93157803	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SERPINA11	327657	hgsc.bcm.edu	36	14	93984599	93984600	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CLMN	79789	hgsc.bcm.edu	36	14	94738984	94738984	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATG2B	55102	hgsc.bcm.edu	36	14	95853325	95853325	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MKRN3	7681	hgsc.bcm.edu	36	15	21362497	21362498	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MTMR10	54893	hgsc.bcm.edu	36	15	29021017	29021017	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RYR3	6263	hgsc.bcm.edu	36	15	31802293	31802293	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C15orf52	388115	hgsc.bcm.edu	36	15	38419074	38419074	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RPAP1	26015	hgsc.bcm.edu	36	15	39602392	39602393	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MGA	23269	hgsc.bcm.edu	36	15	39829774	39829775	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PIGB	9488	hgsc.bcm.edu	36	15	53418795	53418795	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RFX7	64864	hgsc.bcm.edu	36	15	54173473	54173473	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HERC1	8925	hgsc.bcm.edu	36	15	61773256	61773256	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF609	23060	hgsc.bcm.edu	36	15	62579329	62579329	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SNX33	257364	hgsc.bcm.edu	36	15	73729791	73729791	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SCAPER	49855	hgsc.bcm.edu	36	15	74745081	74745081	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1024	23251	hgsc.bcm.edu	36	15	77537641	77537641	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HDGFRP3	50810	hgsc.bcm.edu	36	15	81623769	81623769	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ACAN	176	hgsc.bcm.edu	36	15	87189779	87189780	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHD2	1106	hgsc.bcm.edu	36	15	91348953	91348955	+	In_Frame_Del	DEL	GAT	GAT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GAT	GAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ADAMTS17	170691	hgsc.bcm.edu	36	15	98699574	98699576	+	In_Frame_Del	DEL	CAG	CAG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	CAG	CAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AXIN1	8312	hgsc.bcm.edu	36	16	287090	287090	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AXIN1	8312	hgsc.bcm.edu	36	16	336963	336963	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
E4F1	1877	hgsc.bcm.edu	36	16	2223541	2223542	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TIGD7	91151	hgsc.bcm.edu	36	16	3289338	3289338	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM18A	780776	hgsc.bcm.edu	36	16	10774704	10774704	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNFRSF17	608	hgsc.bcm.edu	36	16	11967644	11967645	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MKL2	57496	hgsc.bcm.edu	36	16	14253801	14253801	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
POLR3E	55718	hgsc.bcm.edu	36	16	22245011	22245011	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLK1	5347	hgsc.bcm.edu	36	16	23606324	23606324	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ERN2	10595	hgsc.bcm.edu	36	16	23629762	23629763	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNRC6A	27327	hgsc.bcm.edu	36	16	24708256	24708257	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL4R	3566	hgsc.bcm.edu	36	16	27282220	27282220	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ATXN2L	11273	hgsc.bcm.edu	36	16	28754851	28754851	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCTD13	253980	hgsc.bcm.edu	36	16	29830865	29830865	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TAOK2	9344	hgsc.bcm.edu	36	16	29910272	29910273	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
INO80E	283899	hgsc.bcm.edu	36	16	29924154	29924154	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DOC2A	8448	hgsc.bcm.edu	36	16	29925036	29925036	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHKB	5257	hgsc.bcm.edu	36	16	46187839	46187839	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DHODH	1723	hgsc.bcm.edu	36	16	70603479	70603479	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZFHX3	463	hgsc.bcm.edu	36	16	71549142	71549143	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NUDT7	283927	hgsc.bcm.edu	36	16	76333245	76333245	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLCG2	5336	hgsc.bcm.edu	36	16	80491853	80491854	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZC3H18	124245	hgsc.bcm.edu	36	16	87218642	87218642	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TCF25	22980	hgsc.bcm.edu	36	16	88478520	88478521	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLD2	5338	hgsc.bcm.edu	36	17	4666105	4666105	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC16A11	162515	hgsc.bcm.edu	36	17	6886206	6886206	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TP53	7157	hgsc.bcm.edu	36	17	7517761	7517761	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KDM6B	23135	hgsc.bcm.edu	36	17	7692553	7692553	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CHD3	1107	hgsc.bcm.edu	36	17	7738481	7738481	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDRT15	146822	hgsc.bcm.edu	36	17	14080385	14080386	+	Frame_Shift_Ins	INS	-	-	CT	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDRT1	374286	hgsc.bcm.edu	36	17	15459816	15459816	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TOP3A	7156	hgsc.bcm.edu	36	17	18122270	18122270	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ULK2	9706	hgsc.bcm.edu	36	17	19670044	19670045	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLFN12	55106	hgsc.bcm.edu	36	17	30773606	30773606	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDK12	0	hgsc.bcm.edu	36	17	34881220	34881220	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KCNH4	23415	hgsc.bcm.edu	36	17	37581785	37581785	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WNK4	65266	hgsc.bcm.edu	36	17	38190943	38190943	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UBTF	7343	hgsc.bcm.edu	36	17	39649467	39649468	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C17orf104	0	hgsc.bcm.edu	36	17	40102309	40102309	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIF2B	84643	hgsc.bcm.edu	36	17	49257013	49257013	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF43	54894	hgsc.bcm.edu	36	17	53790160	53790160	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TBX4	9496	hgsc.bcm.edu	36	17	56915127	56915127	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TLK2	11011	hgsc.bcm.edu	36	17	57984772	57984772	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PSMC5	5705	hgsc.bcm.edu	36	17	59262228	59262228	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PECAM1	5175	hgsc.bcm.edu	36	17	59802036	59802037	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AXIN2	8313	hgsc.bcm.edu	36	17	60963046	60963047	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AXIN2	8313	hgsc.bcm.edu	36	17	60984629	60984629	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SOX9	6662	hgsc.bcm.edu	36	17	67631354	67631355	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	GA	GA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
UNK	85451	hgsc.bcm.edu	36	17	71326397	71326397	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MRPL38	64978	hgsc.bcm.edu	36	17	71407289	71407290	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TNRC6C	57690	hgsc.bcm.edu	36	17	73558575	73558575	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CBX4	8535	hgsc.bcm.edu	36	17	75423346	75423346	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
P4HB	5034	hgsc.bcm.edu	36	17	77397053	77397053	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF519	162655	hgsc.bcm.edu	36	18	14096344	14096344	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OSBPL1A	114876	hgsc.bcm.edu	36	18	20000552	20000552	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRAPPC8	0	hgsc.bcm.edu	36	18	27707416	27707416	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GALNT1	2589	hgsc.bcm.edu	36	18	31488731	31488731	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FHOD3	91010	hgsc.bcm.edu	36	18	32459514	32459514	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RIT2	6014	hgsc.bcm.edu	36	18	38577629	38577630	+	Frame_Shift_Del	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SETBP1	26040	hgsc.bcm.edu	36	18	40786402	40786402	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZBTB7C	201501	hgsc.bcm.edu	36	18	43821083	43821083	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ALPK2	115701	hgsc.bcm.edu	36	18	54397420	54397420	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MALT1	10892	hgsc.bcm.edu	36	18	54499541	54499541	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
KIAA1468	57614	hgsc.bcm.edu	36	18	58117036	58117037	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PHLPP1	23239	hgsc.bcm.edu	36	18	58790866	58790867	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SERPINB10	5273	hgsc.bcm.edu	36	18	59735719	59735719	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CDH7	28513	hgsc.bcm.edu	36	18	61699046	61699046	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MIDN	90007	hgsc.bcm.edu	36	19	1208161	1208161	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ELAVL3	1995	hgsc.bcm.edu	36	19	11438605	11438605	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF791	163049	hgsc.bcm.edu	36	19	12601044	12601044	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
OR7C1	26664	hgsc.bcm.edu	36	19	14771414	14771414	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MYO9B	4650	hgsc.bcm.edu	36	19	17183818	17183818	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
CRTC1	23373	hgsc.bcm.edu	36	19	18740554	18740554	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SUGP2	0	hgsc.bcm.edu	36	19	18997394	18997394	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF714	148206	hgsc.bcm.edu	36	19	21091605	21091605	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GPI	10007	hgsc.bcm.edu	36	19	39579122	39579122	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF420	147923	hgsc.bcm.edu	36	19	42310812	42310812	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDR87	83889	hgsc.bcm.edu	36	19	43070255	43070256	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPRED3	399473	hgsc.bcm.edu	36	19	43572901	43572902	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PLEKHG2	64857	hgsc.bcm.edu	36	19	44597638	44597638	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
BCKDHA	593	hgsc.bcm.edu	36	19	46620880	46620882	+	In_Frame_Del	DEL	AGG	AGG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AGG	AGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MEGF8	1954	hgsc.bcm.edu	36	19	47539543	47539543	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF235	9310	hgsc.bcm.edu	36	19	49484477	49484477	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NKPD1	284353	hgsc.bcm.edu	36	19	50347203	50347203	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TEAD2	8463	hgsc.bcm.edu	36	19	54542285	54542285	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TEAD2	8463	hgsc.bcm.edu	36	19	54550231	54550231	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PRR12	57479	hgsc.bcm.edu	36	19	54790619	54790620	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AP2A1	160	hgsc.bcm.edu	36	19	55000741	55000741	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
VSIG10L	0	hgsc.bcm.edu	36	19	56536327	56536327	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF880	0	hgsc.bcm.edu	36	19	57580250	57580250	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF524	147807	hgsc.bcm.edu	36	19	60805457	60805458	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
USP29	57663	hgsc.bcm.edu	36	19	62332050	62332051	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF460	10794	hgsc.bcm.edu	36	19	62495144	62495144	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMC2	117532	hgsc.bcm.edu	36	20	2490587	2490587	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EBF4	57593	hgsc.bcm.edu	36	20	2680416	2680416	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DSTN	11034	hgsc.bcm.edu	36	20	17529679	17529680	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF133	7692	hgsc.bcm.edu	36	20	18243805	18243805	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DNMT3B	1789	hgsc.bcm.edu	36	20	30848312	30848312	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
C20orf186	149954	hgsc.bcm.edu	36	20	31134875	31134875	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EMILIN3	90187	hgsc.bcm.edu	36	20	39424243	39424243	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRSF6	0	hgsc.bcm.edu	36	20	41522796	41522796	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SGK2	23678	hgsc.bcm.edu	36	20	41628518	41628519	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SLC12A5	57468	hgsc.bcm.edu	36	20	44113829	44113829	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
DDX27	55661	hgsc.bcm.edu	36	20	47291911	47291911	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TSHZ2	128553	hgsc.bcm.edu	36	20	51305852	51305852	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYCP2	10388	hgsc.bcm.edu	36	20	57915836	57915836	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TPTE	7179	hgsc.bcm.edu	36	21	9966568	9966568	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NRIP1	8204	hgsc.bcm.edu	36	21	15260201	15260201	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TCP10L	140290	hgsc.bcm.edu	36	21	32870962	32870962	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SYNJ1	8867	hgsc.bcm.edu	36	21	32939891	32939891	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TMPRSS3	64699	hgsc.bcm.edu	36	21	42688589	42688589	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
TRAPPC10	7109	hgsc.bcm.edu	36	21	44338432	44338432	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
COL18A1	80781	hgsc.bcm.edu	36	21	45749580	45749580	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF74	7625	hgsc.bcm.edu	36	22	19091208	19091208	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PI4KA	5297	hgsc.bcm.edu	36	22	19418700	19418700	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF70	7621	hgsc.bcm.edu	36	22	22417086	22417086	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
EWSR1	2130	hgsc.bcm.edu	36	22	28025765	28025765	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
NEFH	4744	hgsc.bcm.edu	36	22	28215599	28215604	+	In_Frame_Del	DEL	AGGAAG	AGGAAG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AGGAAG	AGGAAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SMTN	6525	hgsc.bcm.edu	36	22	29816952	29816953	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PNPLA5	150379	hgsc.bcm.edu	36	22	42617013	42617014	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
MLC1	23209	hgsc.bcm.edu	36	22	48865324	48865324	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SBF1	6305	hgsc.bcm.edu	36	22	49245622	49245622	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ARSD	414	hgsc.bcm.edu	36	X	2835369	2835369	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FAM47B	170062	hgsc.bcm.edu	36	X	34872204	34872205	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	CA	CA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
WDR13	64743	hgsc.bcm.edu	36	X	48342145	48342145	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
GATA1	2623	hgsc.bcm.edu	36	X	48537341	48537341	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
IL2RG	3561	hgsc.bcm.edu	36	X	70244339	70244339	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RGAG4	340526	hgsc.bcm.edu	36	X	71266528	71266528	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
ZNF711	7552	hgsc.bcm.edu	36	X	84409963	84409965	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AAG	AAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
PCDH19	57575	hgsc.bcm.edu	36	X	99549161	99549161	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RNF128	79589	hgsc.bcm.edu	36	X	105823912	105823912	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
AMOT	154796	hgsc.bcm.edu	36	X	111909133	111909135	+	In_Frame_Del	DEL	CAG	CAG	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	CAG	CAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
RBMXL3	139804	hgsc.bcm.edu	36	X	114331053	114331053	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
LUZP4	51213	hgsc.bcm.edu	36	X	114447503	114447504	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	AT	AT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
HS6ST2	90161	hgsc.bcm.edu	36	X	131590263	131590263	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
FGF13	2258	hgsc.bcm.edu	36	X	137767489	137767489	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPANXA1	30014	hgsc.bcm.edu	36	X	140499696	140499696	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SPANXA1	30014	hgsc.bcm.edu	36	X	140506325	140506325	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
SRPK3	26576	hgsc.bcm.edu	36	X	152702728	152702729	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
F8	2157	hgsc.bcm.edu	36	X	153810880	153810880	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3492-01A-01D-1408-10	TCGA-AA-3492-11A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b56c7a32-5e3d-4cf1-b2a1-b0adee82207e	8839a810-6d53-45d5-8500-b3cc4e997d46
