Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
RPA3	6119	hgsc.bcm.edu	36	7	7645249	7645249	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PHF14	9678	hgsc.bcm.edu	36	7	10988703	10988703	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
HECW1	23072	hgsc.bcm.edu	36	7	43485737	43485737	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ZNF727	442319	hgsc.bcm.edu	36	7	63167371	63167371	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PEX1	5189	hgsc.bcm.edu	36	7	91978225	91978225	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PPP1R9A	55607	hgsc.bcm.edu	36	7	94757421	94757421	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PON3	5446	hgsc.bcm.edu	36	7	94831192	94831192	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MUC17	140453	hgsc.bcm.edu	36	7	100464000	100464000	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PAX1	5075	hgsc.bcm.edu	36	20	21637268	21637268	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
C20orf3	57136	hgsc.bcm.edu	36	20	24892595	24892595	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TGM2	7052	hgsc.bcm.edu	36	20	36203123	36203123	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
RALGAPB	0	hgsc.bcm.edu	36	20	36594901	36594901	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PTPRT	11122	hgsc.bcm.edu	36	20	40146821	40146821	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
BCAS1	8537	hgsc.bcm.edu	36	20	52045883	52045883	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CDH4	1002	hgsc.bcm.edu	36	20	59942604	59942604	+	Silent	SNP	C	C	T	rs3753045	byCluster;byFrequency	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MYO18B	84700	hgsc.bcm.edu	36	22	24678303	24678303	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
C22orf30	253143	hgsc.bcm.edu	36	22	30441227	30441227	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
SMC1B	27127	hgsc.bcm.edu	36	22	44161556	44161556	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
NFATC4	4776	hgsc.bcm.edu	36	14	23909515	23909515	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
HEATR5A	25938	hgsc.bcm.edu	36	14	30832558	30832558	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ARHGAP5	394	hgsc.bcm.edu	36	14	31631047	31631047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MUDENG	55745	hgsc.bcm.edu	36	14	56810791	56810791	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ATCAY	85300	hgsc.bcm.edu	36	19	3861875	3861875	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MUC16	94025	hgsc.bcm.edu	36	19	8929973	8929973	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MUC16	94025	hgsc.bcm.edu	36	19	8930779	8930779	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
OR7D4	125958	hgsc.bcm.edu	36	19	9186271	9186271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ZNF20	10168	hgsc.bcm.edu	36	19	12107656	12107656	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
JAK3	3718	hgsc.bcm.edu	36	19	17810183	17810183	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ZNF737	100129842	hgsc.bcm.edu	36	19	20520212	20520212	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
WDR87	83889	hgsc.bcm.edu	36	19	43072551	43072551	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
FPR1	2357	hgsc.bcm.edu	36	19	56941681	56941681	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ZNF614	80110	hgsc.bcm.edu	36	19	57212089	57212089	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
LENG1	79165	hgsc.bcm.edu	36	19	59354007	59354007	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
EPN1	29924	hgsc.bcm.edu	36	19	60895868	60895868	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MTDH	92140	hgsc.bcm.edu	36	8	98768916	98768916	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
OXR1	55074	hgsc.bcm.edu	36	8	107784352	107784352	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CSMD3	114788	hgsc.bcm.edu	36	8	114518208	114518208	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PLCH2	9651	hgsc.bcm.edu	36	1	2419870	2419870	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
DFFA	1676	hgsc.bcm.edu	36	1	10451922	10451922	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
GMEB1	10691	hgsc.bcm.edu	36	1	28892079	28892079	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PTPRU	10076	hgsc.bcm.edu	36	1	29514541	29514541	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CLSPN	63967	hgsc.bcm.edu	36	1	35998638	35998638	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
USP24	23358	hgsc.bcm.edu	36	1	55316851	55316851	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
COL24A1	255631	hgsc.bcm.edu	36	1	85983082	85983082	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
FLG	2312	hgsc.bcm.edu	36	1	150547932	150547932	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ETV3L	440695	hgsc.bcm.edu	36	1	155335608	155335608	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
COPA	1314	hgsc.bcm.edu	36	1	158530938	158530938	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
HSPA6	3310	hgsc.bcm.edu	36	1	159762782	159762782	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TNR	7143	hgsc.bcm.edu	36	1	173600941	173600941	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
C1orf26	54823	hgsc.bcm.edu	36	1	183467459	183467459	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
RPS6KC1	26750	hgsc.bcm.edu	36	1	211502758	211502758	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
USH2A	7399	hgsc.bcm.edu	36	1	213888533	213888533	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KMO	8564	hgsc.bcm.edu	36	1	239820013	239820013	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
OR2T1	26696	hgsc.bcm.edu	36	1	246636692	246636692	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CARS	833	hgsc.bcm.edu	36	11	3020053	3020053	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
OR8K5	219453	hgsc.bcm.edu	36	11	55684105	55684105	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
SLC22A9	114571	hgsc.bcm.edu	36	11	62932787	62932787	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PLCB3	5331	hgsc.bcm.edu	36	11	63789387	63789387	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
RELA	5970	hgsc.bcm.edu	36	11	65178631	65178631	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CD248	57124	hgsc.bcm.edu	36	11	65839872	65839872	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
RAD9A	5883	hgsc.bcm.edu	36	11	66920165	66920165	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
GRIA4	2893	hgsc.bcm.edu	36	11	105238088	105238088	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CBL	867	hgsc.bcm.edu	36	11	118654200	118654200	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MYLK4	340156	hgsc.bcm.edu	36	6	2623501	2623501	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
HLA-DRA	3122	hgsc.bcm.edu	36	6	32519648	32519648	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
FRS3	10817	hgsc.bcm.edu	36	6	41848651	41848651	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
EYS	346007	hgsc.bcm.edu	36	6	65357353	65357353	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
DOPEY1	23033	hgsc.bcm.edu	36	6	83895909	83895909	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KIAA1009	22832	hgsc.bcm.edu	36	6	84941723	84941723	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
SIM1	6492	hgsc.bcm.edu	36	6	101003275	101003275	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
OSTM1	28962	hgsc.bcm.edu	36	6	108477179	108477179	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
C6orf170	221322	hgsc.bcm.edu	36	6	121618219	121618219	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
BCLAF1	9774	hgsc.bcm.edu	36	6	136639032	136639032	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
FRMD1	79981	hgsc.bcm.edu	36	6	168207170	168207170	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TP53	7157	hgsc.bcm.edu	36	17	7518273	7518273	+	Missense_Mutation	SNP	C	C	T	rs28934575	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
LGALS9C	654346	hgsc.bcm.edu	36	17	18327954	18327954	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TMIGD1	388364	hgsc.bcm.edu	36	17	25680558	25680558	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
GH2	2689	hgsc.bcm.edu	36	17	59311903	59311903	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KPNA2	3838	hgsc.bcm.edu	36	17	63463749	63463749	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KRTAP19-1	337882	hgsc.bcm.edu	36	21	30774454	30774454	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KRTAP22-2	100288287	hgsc.bcm.edu	36	21	30884466	30884466	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
WDR24	84219	hgsc.bcm.edu	36	16	675947	675947	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ADCY9	115	hgsc.bcm.edu	36	16	3973345	3973345	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
GRIN2A	2903	hgsc.bcm.edu	36	16	9851191	9851191	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
USP31	84196	hgsc.bcm.edu	36	16	22988310	22988310	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
SCNN1G	6340	hgsc.bcm.edu	36	16	23131942	23131942	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
APOB48R	55911	hgsc.bcm.edu	36	16	28416160	28416160	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
RPGRIP1L	23322	hgsc.bcm.edu	36	16	52283701	52283701	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CDH8	1006	hgsc.bcm.edu	36	16	60247010	60247010	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
VPS4B	9525	hgsc.bcm.edu	36	18	59211643	59211643	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TBC1D5	9779	hgsc.bcm.edu	36	3	17388601	17388601	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
SUSD5	26032	hgsc.bcm.edu	36	3	33169432	33169432	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TKT	7086	hgsc.bcm.edu	36	3	53249338	53249338	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MITF	4286	hgsc.bcm.edu	36	3	70091212	70091212	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ROBO2	6092	hgsc.bcm.edu	36	3	77720665	77720665	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KIAA1407	57577	hgsc.bcm.edu	36	3	115236542	115236542	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
HCLS1	3059	hgsc.bcm.edu	36	3	122838695	122838695	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KALRN	8997	hgsc.bcm.edu	36	3	125635853	125635853	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TRPC1	7220	hgsc.bcm.edu	36	3	144005546	144005546	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
C3orf16	389161	hgsc.bcm.edu	36	3	150968113	150968113	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ZBBX	79740	hgsc.bcm.edu	36	3	168517575	168517575	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PIK3CA	5290	hgsc.bcm.edu	36	3	180434758	180434758	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
A2ML1	144568	hgsc.bcm.edu	36	12	8867592	8867592	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
GRIN2B	2904	hgsc.bcm.edu	36	12	13616078	13616078	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KRT2	3849	hgsc.bcm.edu	36	12	51327830	51327830	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CRY1	1407	hgsc.bcm.edu	36	12	105917969	105917969	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CLIP1	6249	hgsc.bcm.edu	36	12	121378459	121378459	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
EP400	57634	hgsc.bcm.edu	36	12	131012246	131012246	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
DLL4	54567	hgsc.bcm.edu	36	15	39011196	39011196	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TGM5	9333	hgsc.bcm.edu	36	15	41314351	41314351	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
FAM123B	139285	hgsc.bcm.edu	36	X	63327211	63327211	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CYLC1	1538	hgsc.bcm.edu	36	X	83015559	83015559	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
NRK	203447	hgsc.bcm.edu	36	X	105039394	105039394	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
GUCY2F	2986	hgsc.bcm.edu	36	X	108525366	108525366	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ENOX2	10495	hgsc.bcm.edu	36	X	129629346	129629346	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PDE6B	5158	hgsc.bcm.edu	36	4	609517	609517	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
NCAPG	64151	hgsc.bcm.edu	36	4	17451367	17451367	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
FRYL	285527	hgsc.bcm.edu	36	4	48219695	48219695	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KIT	3815	hgsc.bcm.edu	36	4	55288341	55288341	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
SNTG2	54221	hgsc.bcm.edu	36	2	1291330	1291330	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ALK	238	hgsc.bcm.edu	36	2	29298929	29298929	+	Silent	SNP	G	G	A	rs56146053	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
SRBD1	55133	hgsc.bcm.edu	36	2	45680357	45680357	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
RHOQ	23433	hgsc.bcm.edu	36	2	46661607	46661607	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TTN	7273	hgsc.bcm.edu	36	2	179306287	179306287	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
DNAH7	56171	hgsc.bcm.edu	36	2	196464655	196464655	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ORC2	83884	hgsc.bcm.edu	36	2	201493972	201493972	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CBWD1	55871	hgsc.bcm.edu	36	9	168928	168928	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KIF24	347240	hgsc.bcm.edu	36	9	34280307	34280307	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
OR13J1	392309	hgsc.bcm.edu	36	9	35860162	35860162	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TLE4	7091	hgsc.bcm.edu	36	9	81457413	81457413	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
DAPK1	1612	hgsc.bcm.edu	36	9	89501870	89501870	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
LPAR1	1902	hgsc.bcm.edu	36	9	112743751	112743751	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
DBC1	57805	hgsc.bcm.edu	36	9	121010851	121010851	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
STRBP	55342	hgsc.bcm.edu	36	9	124960525	124960525	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
SPG20	23111	hgsc.bcm.edu	36	13	35784585	35784585	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TRPC4	7223	hgsc.bcm.edu	36	13	37123429	37123429	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
FREM2	341640	hgsc.bcm.edu	36	13	38161318	38161318	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
FREM2	341640	hgsc.bcm.edu	36	13	38320658	38320658	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
DGKH	160851	hgsc.bcm.edu	36	13	41691918	41691918	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CTNNA3	29119	hgsc.bcm.edu	36	10	68649372	68649372	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CTNND2	1501	hgsc.bcm.edu	36	5	11164130	11164130	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CTNND2	1501	hgsc.bcm.edu	36	5	11399683	11399683	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
C5orf42	65250	hgsc.bcm.edu	36	5	37156188	37156188	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CARD6	84674	hgsc.bcm.edu	36	5	40888164	40888164	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PIK3R1	5295	hgsc.bcm.edu	36	5	67624894	67624894	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PIK3R1	5295	hgsc.bcm.edu	36	5	67625375	67625375	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MCCC2	64087	hgsc.bcm.edu	36	5	70966577	70966577	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
F2R	2149	hgsc.bcm.edu	36	5	76065064	76065064	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CMYA5	202333	hgsc.bcm.edu	36	5	79062469	79062469	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PAM	23077	hgsc.bcm.edu	36	5	102388912	102388912	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
APC	324	hgsc.bcm.edu	36	5	112164936	112164936	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
APC	324	hgsc.bcm.edu	36	5	112205836	112205836	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
TCERG1	10915	hgsc.bcm.edu	36	5	145823462	145823462	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
HNF4A	3172	hgsc.bcm.edu	36	20	42491575	42491575	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KCNU1	157855	hgsc.bcm.edu	36	8	36810336	36810336	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ITGA5	3678	hgsc.bcm.edu	36	12	53081718	53081718	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
HRNR	388697	hgsc.bcm.edu	36	1	150462353	150462353	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CRIPAK	285464	hgsc.bcm.edu	36	4	1378622	1378623	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
APC	324	hgsc.bcm.edu	36	5	112203200	112203201	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ARHGEF37	0	hgsc.bcm.edu	36	5	148980188	148980189	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
ZNF518A	9849	hgsc.bcm.edu	36	10	97908846	97908846	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MMP12	4321	hgsc.bcm.edu	36	11	102244003	102244004	+	Frame_Shift_Ins	INS	-	-	T	rs5794199	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
KRT4	3851	hgsc.bcm.edu	36	12	51493869	51493870	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
PRR11	55771	hgsc.bcm.edu	36	17	54601953	54601953	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
MORC3	23515	hgsc.bcm.edu	36	21	36658316	36658318	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
CDC42EP1	11135	hgsc.bcm.edu	36	22	36294355	36294375	+	In_Frame_Del	DEL	CAGCGCCTGCTGCAAACCCCT	CAGCGCCTGCTGCAAACCCCT	-	novel	unknown	TCGA-AA-3511-01A-21D-1835-10	TCGA-AA-3511-11A-01D-1835-10	CAGCGCCTGCTGCAAACCCCT	CAGCGCCTGCTGCAAACCCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e65899fb-dd8e-4628-b15a-450f5e0cb98c	278a4f5b-d9bb-437c-9231-3a4d11643a0e
