Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
MICALL2	79778	hgsc.bcm.edu	36	7	1444465	1444465	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MICALL2	79778	hgsc.bcm.edu	36	7	1446185	1446185	+	Missense_Mutation	SNP	T	T	C	rs61287564	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LFNG	3955	hgsc.bcm.edu	36	7	2519407	2519407	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CARD11	84433	hgsc.bcm.edu	36	7	2943286	2943286	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SDK1	221935	hgsc.bcm.edu	36	7	3968997	3968997	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TNRC18	84629	hgsc.bcm.edu	36	7	5319353	5319353	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SCIN	85477	hgsc.bcm.edu	36	7	12577119	12577119	+	Missense_Mutation	SNP	A	A	G	rs2240572	byCluster;byFrequency;byHapMap	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MEOX2	4223	hgsc.bcm.edu	36	7	15692322	15692322	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SNX13	23161	hgsc.bcm.edu	36	7	17821090	17821090	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GPNMB	10457	hgsc.bcm.edu	36	7	23263167	23263167	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CDK13	0	hgsc.bcm.edu	36	7	40094369	40094369	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GLI3	2737	hgsc.bcm.edu	36	7	41973895	41973895	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PKD1L1	168507	hgsc.bcm.edu	36	7	47910608	47910608	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EGFR	1956	hgsc.bcm.edu	36	7	55209200	55209200	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EGFR	1956	hgsc.bcm.edu	36	7	55209207	55209207	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EGFR	1956	hgsc.bcm.edu	36	7	55209968	55209968	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SAMD9L	219285	hgsc.bcm.edu	36	7	92599149	92599149	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MCM7	4176	hgsc.bcm.edu	36	7	99529809	99529809	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LRWD1	222229	hgsc.bcm.edu	36	7	101895200	101895200	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MET	8731	hgsc.bcm.edu	36	7	116206244	116206244	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
WNT2	7472	hgsc.bcm.edu	36	7	116705515	116705515	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C7orf58	79974	hgsc.bcm.edu	36	7	120671506	120671506	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LMOD2	442721	hgsc.bcm.edu	36	7	123083304	123083304	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EXOC4	60412	hgsc.bcm.edu	36	7	133230892	133230892	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BRAF	673	hgsc.bcm.edu	36	7	140086163	140086163	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MGAM	8972	hgsc.bcm.edu	36	7	141387023	141387023	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TRPV5	56302	hgsc.bcm.edu	36	7	142335309	142335309	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C7orf34	135927	hgsc.bcm.edu	36	7	142347795	142347795	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CNTNAP2	26047	hgsc.bcm.edu	36	7	147500423	147500423	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CNTNAP2	26047	hgsc.bcm.edu	36	7	147545539	147545539	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EZH2	2146	hgsc.bcm.edu	36	7	148137154	148137154	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF786	136051	hgsc.bcm.edu	36	7	148399293	148399293	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SIRPB1	10326	hgsc.bcm.edu	36	20	1507126	1507126	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C20orf72	92667	hgsc.bcm.edu	36	20	17898977	17898977	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TTLL9	164395	hgsc.bcm.edu	36	20	29994411	29994411	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HCK	3055	hgsc.bcm.edu	36	20	30145350	30145350	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C20orf114	92747	hgsc.bcm.edu	36	20	31342452	31342452	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
IFT52	51098	hgsc.bcm.edu	36	20	41666277	41666277	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
STAU1	6780	hgsc.bcm.edu	36	20	47167789	47167789	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
COL9A3	1299	hgsc.bcm.edu	36	20	60921048	60921048	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DIDO1	11083	hgsc.bcm.edu	36	20	61009071	61009071	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HPS4	89781	hgsc.bcm.edu	36	22	25198279	25198279	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CHEK2	11200	hgsc.bcm.edu	36	22	27422946	27422946	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NF2	4771	hgsc.bcm.edu	36	22	28365156	28365156	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TBC1D10A	83874	hgsc.bcm.edu	36	22	29018387	29018387	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SYN3	8224	hgsc.bcm.edu	36	22	31595080	31595080	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TMPRSS6	164656	hgsc.bcm.edu	36	22	35824419	35824419	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PKDREJ	10343	hgsc.bcm.edu	36	22	45035126	45035126	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CEBPE	1053	hgsc.bcm.edu	36	14	22656581	22656581	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ARHGAP5	394	hgsc.bcm.edu	36	14	31631047	31631047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EAPP	55837	hgsc.bcm.edu	36	14	34068322	34068322	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FANCM	57697	hgsc.bcm.edu	36	14	44728140	44728140	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PPIL5	122769	hgsc.bcm.edu	36	14	49144099	49144099	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PTGDR	5729	hgsc.bcm.edu	36	14	51804674	51804674	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KTN1	3895	hgsc.bcm.edu	36	14	55148856	55148856	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RBM25	58517	hgsc.bcm.edu	36	14	72645842	72645842	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SERPINA9	327657	hgsc.bcm.edu	36	14	94003305	94003305	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DYNC1H1	1778	hgsc.bcm.edu	36	14	101586625	101586625	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CDC42BPB	9578	hgsc.bcm.edu	36	14	102490327	102490327	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PCDH11Y	83259	hgsc.bcm.edu	36	Y	5027117	5027117	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
USP9Y	8287	hgsc.bcm.edu	36	Y	13468295	13468295	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NLGN4Y	22829	hgsc.bcm.edu	36	Y	15462386	15462386	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CD24	100133941	hgsc.bcm.edu	36	Y	19613957	19613957	+	Silent	SNP	A	A	G	rs17855271	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ATP8B3	148229	hgsc.bcm.edu	36	19	1742795	1742795	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DAPK3	1613	hgsc.bcm.edu	36	19	3915313	3915313	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ANKRD24	170961	hgsc.bcm.edu	36	19	4167001	4167001	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KDM4B	23030	hgsc.bcm.edu	36	19	5095411	5095411	+	Silent	SNP	T	T	C	rs10408767	by2Hit2Allele;byCluster	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF557	79230	hgsc.bcm.edu	36	19	7034124	7034124	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MUC16	94025	hgsc.bcm.edu	36	19	8952064	8952064	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SMARCA4	6597	hgsc.bcm.edu	36	19	10993438	10993438	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CASP14	23581	hgsc.bcm.edu	36	19	15027303	15027303	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BRD4	23476	hgsc.bcm.edu	36	19	15240764	15240764	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BRD4	23476	hgsc.bcm.edu	36	19	15240765	15240765	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NWD1	284434	hgsc.bcm.edu	36	19	16735747	16735747	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ANKLE1	126549	hgsc.bcm.edu	36	19	17255221	17255221	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MAST3	23031	hgsc.bcm.edu	36	19	18093580	18093580	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
WDR88	126248	hgsc.bcm.edu	36	19	38343189	38343189	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF568	374900	hgsc.bcm.edu	36	19	42132393	42132393	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF383	163087	hgsc.bcm.edu	36	19	42418780	42418780	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PLEKHG2	64857	hgsc.bcm.edu	36	19	44597502	44597502	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FCGBP	8857	hgsc.bcm.edu	36	19	45116327	45116327	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CYP2A7	1549	hgsc.bcm.edu	36	19	46077935	46077935	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FGF21	26291	hgsc.bcm.edu	36	19	53953180	53953180	+	Missense_Mutation	SNP	T	T	C	rs739320	byCluster;byFrequency	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PLEKHA4	57664	hgsc.bcm.edu	36	19	54034313	54034313	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MYH14	79784	hgsc.bcm.edu	36	19	55496860	55496860	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NLRP12	91662	hgsc.bcm.edu	36	19	59002700	59002700	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NLRP13	126204	hgsc.bcm.edu	36	19	61099176	61099176	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PEG3	5178	hgsc.bcm.edu	36	19	62020444	62020444	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FGFR1	2260	hgsc.bcm.edu	36	8	38395000	38395000	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ANK1	286	hgsc.bcm.edu	36	8	41696448	41696448	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
AP3M2	10947	hgsc.bcm.edu	36	8	42131394	42131394	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PLAT	5327	hgsc.bcm.edu	36	8	42157347	42157347	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PCMTD1	115294	hgsc.bcm.edu	36	8	52906568	52906568	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ARFGEF1	10565	hgsc.bcm.edu	36	8	68362825	68362825	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLC7A13	157724	hgsc.bcm.edu	36	8	87298891	87298891	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VPS13B	157680	hgsc.bcm.edu	36	8	100356531	100356531	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PKHD1L1	93035	hgsc.bcm.edu	36	8	110522223	110522223	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PKHD1L1	93035	hgsc.bcm.edu	36	8	110526760	110526760	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZHX1	11244	hgsc.bcm.edu	36	8	124336390	124336390	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLC45A4	57210	hgsc.bcm.edu	36	8	142297551	142297551	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF707	286075	hgsc.bcm.edu	36	8	144848097	144848097	+	Silent	SNP	A	A	G	rs11786757	byCluster	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SCRIB	23513	hgsc.bcm.edu	36	8	144949615	144949615	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF250	58500	hgsc.bcm.edu	36	8	146078573	146078573	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF16	7564	hgsc.bcm.edu	36	8	146128673	146128673	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C1orf127	148345	hgsc.bcm.edu	36	1	10940268	10940268	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TAS1R2	80834	hgsc.bcm.edu	36	1	19053669	19053669	+	Silent	SNP	A	A	C	rs28470550	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ARID1A	8289	hgsc.bcm.edu	36	1	26974784	26974784	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MACF1	23499	hgsc.bcm.edu	36	1	39626120	39626120	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MACF1	23499	hgsc.bcm.edu	36	1	39700200	39700200	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PCSK9	255738	hgsc.bcm.edu	36	1	55296318	55296318	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
WLS	79971	hgsc.bcm.edu	36	1	68397424	68397424	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LRRC40	55631	hgsc.bcm.edu	36	1	70423164	70423164	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TYW3	127253	hgsc.bcm.edu	36	1	74977010	74977010	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DNTTIP2	30836	hgsc.bcm.edu	36	1	94114884	94114884	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM102B	284611	hgsc.bcm.edu	36	1	108973766	108973766	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RBM15	64783	hgsc.bcm.edu	36	1	110685762	110685762	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VANGL1	81839	hgsc.bcm.edu	36	1	116008235	116008235	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
IGSF3	3321	hgsc.bcm.edu	36	1	116921676	116921676	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ITGA10	8515	hgsc.bcm.edu	36	1	144250103	144250103	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HIST2H2AC	8338	hgsc.bcm.edu	36	1	148125307	148125307	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PIP5K1A	8394	hgsc.bcm.edu	36	1	149481255	149481255	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KPRP	448834	hgsc.bcm.edu	36	1	151000348	151000348	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
IVL	3713	hgsc.bcm.edu	36	1	151149424	151149424	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NUP210L	91181	hgsc.bcm.edu	36	1	152299686	152299686	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OR6K3	391114	hgsc.bcm.edu	36	1	156954197	156954197	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C1orf9	51430	hgsc.bcm.edu	36	1	170811335	170811335	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RC3H1	149041	hgsc.bcm.edu	36	1	172183164	172183164	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CACNA1E	777	hgsc.bcm.edu	36	1	179992812	179992812	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NMNAT2	23057	hgsc.bcm.edu	36	1	181528593	181528593	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HMCN1	83872	hgsc.bcm.edu	36	1	184100340	184100340	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HMCN1	83872	hgsc.bcm.edu	36	1	184350680	184350680	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CDC73	79577	hgsc.bcm.edu	36	1	191360959	191360959	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FCAMR	83953	hgsc.bcm.edu	36	1	205207596	205207596	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HSD11B1	3290	hgsc.bcm.edu	36	1	207947021	207947021	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KCNH1	3756	hgsc.bcm.edu	36	1	209043933	209043933	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RPS6KC1	26750	hgsc.bcm.edu	36	1	211502757	211502757	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
USH2A	7399	hgsc.bcm.edu	36	1	213914972	213914972	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
USH2A	7399	hgsc.bcm.edu	36	1	214030227	214030227	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OBSCN	84033	hgsc.bcm.edu	36	1	226605253	226605253	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SIPA1L2	57568	hgsc.bcm.edu	36	1	230693244	230693244	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF695	57116	hgsc.bcm.edu	36	1	245217878	245217878	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF670	93474	hgsc.bcm.edu	36	1	245268122	245268122	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OR2M7	391196	hgsc.bcm.edu	36	1	246554044	246554044	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OR14C36	127066	hgsc.bcm.edu	36	1	246579363	246579363	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ATHL1	80162	hgsc.bcm.edu	36	11	284678	284678	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OR5W2	390148	hgsc.bcm.edu	36	11	55437763	55437763	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OR8K1	390157	hgsc.bcm.edu	36	11	55870398	55870398	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SSRP1	6749	hgsc.bcm.edu	36	11	56852465	56852465	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OR5B2	390190	hgsc.bcm.edu	36	11	57946569	57946569	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MS4A1	2206	hgsc.bcm.edu	36	11	59992394	59992394	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C11orf83	790955	hgsc.bcm.edu	36	11	62196001	62196001	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C11orf83	790955	hgsc.bcm.edu	36	11	62196114	62196114	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MEN1	4221	hgsc.bcm.edu	36	11	64332061	64332061	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MEN1	4221	hgsc.bcm.edu	36	11	64332081	64332081	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GUCY1A2	2977	hgsc.bcm.edu	36	11	106185958	106185958	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TMPRSS5	80975	hgsc.bcm.edu	36	11	113070448	113070448	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CDON	50937	hgsc.bcm.edu	36	11	125381080	125381080	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ETS1	2113	hgsc.bcm.edu	36	11	127860098	127860098	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VARS2	57176	hgsc.bcm.edu	36	6	30998901	30998901	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PRRC2A	0	hgsc.bcm.edu	36	6	31700071	31700071	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DAXX	1616	hgsc.bcm.edu	36	6	33395475	33395475	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DAXX	1616	hgsc.bcm.edu	36	6	33397515	33397515	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GLP1R	2740	hgsc.bcm.edu	36	6	39161731	39161731	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PRPH2	5961	hgsc.bcm.edu	36	6	42797998	42797998	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TBCC	6903	hgsc.bcm.edu	36	6	42820892	42820892	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIAA0240	23506	hgsc.bcm.edu	36	6	42931577	42931577	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TTBK1	84630	hgsc.bcm.edu	36	6	43338608	43338608	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SUPT3H	8464	hgsc.bcm.edu	36	6	45079480	45079480	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TDRD6	221400	hgsc.bcm.edu	36	6	46769241	46769241	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
IL17F	112744	hgsc.bcm.edu	36	6	52211677	52211677	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EFHC1	114327	hgsc.bcm.edu	36	6	52437805	52437805	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GCLC	2729	hgsc.bcm.edu	36	6	53487015	53487015	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C6orf142	90523	hgsc.bcm.edu	36	6	54203609	54203609	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PHF3	23469	hgsc.bcm.edu	36	6	64447910	64447910	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MAP3K7	6885	hgsc.bcm.edu	36	6	91338233	91338233	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EPHA7	2045	hgsc.bcm.edu	36	6	94022436	94022436	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LAMA4	3910	hgsc.bcm.edu	36	6	112537423	112537423	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LAMA4	3910	hgsc.bcm.edu	36	6	112600580	112600580	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ROS1	6098	hgsc.bcm.edu	36	6	117737959	117737959	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM184A	79632	hgsc.bcm.edu	36	6	119342237	119342237	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PTPRK	5796	hgsc.bcm.edu	36	6	128339552	128339552	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MAP3K4	4216	hgsc.bcm.edu	36	6	161390815	161390815	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FBXO39	162517	hgsc.bcm.edu	36	17	6624505	6624505	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ACADVL	37	hgsc.bcm.edu	36	17	7068075	7068075	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ACAP1	9744	hgsc.bcm.edu	36	17	7187463	7187463	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TP53	7157	hgsc.bcm.edu	36	17	7517831	7517831	+	Missense_Mutation	SNP	G	G	C	rs17849781	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TP53	7157	hgsc.bcm.edu	36	17	7518276	7518276	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PFAS	5198	hgsc.bcm.edu	36	17	8099558	8099558	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FLII	2314	hgsc.bcm.edu	36	17	18090666	18090666	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EPN2	22905	hgsc.bcm.edu	36	17	19173483	19173483	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CCDC144NL	339184	hgsc.bcm.edu	36	17	20709355	20709355	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KCNJ12	3768	hgsc.bcm.edu	36	17	21260314	21260314	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIAA0100	9703	hgsc.bcm.edu	36	17	23994318	23994318	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
EVI2A	2123	hgsc.bcm.edu	36	17	26670111	26670111	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NF1	4763	hgsc.bcm.edu	36	17	26701421	26701421	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SYNRG	0	hgsc.bcm.edu	36	17	32987859	32987859	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GSDMB	55876	hgsc.bcm.edu	36	17	35316028	35316028	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NAGLU	4669	hgsc.bcm.edu	36	17	37949593	37949593	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HOXB1	3211	hgsc.bcm.edu	36	17	43963202	43963202	+	Missense_Mutation	SNP	A	A	G	rs12950537	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ITGA3	3675	hgsc.bcm.edu	36	17	45504479	45504479	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ITGA3	3675	hgsc.bcm.edu	36	17	45511856	45511856	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CACNA1G	8913	hgsc.bcm.edu	36	17	46058529	46058529	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CACNA1G	8913	hgsc.bcm.edu	36	17	46058530	46058530	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SRSF1	0	hgsc.bcm.edu	36	17	53439346	53439346	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GPRC5C	55890	hgsc.bcm.edu	36	17	69948051	69948051	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GRB2	2885	hgsc.bcm.edu	36	17	70901280	70901280	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RUNX1	861	hgsc.bcm.edu	36	21	35174739	35174739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DSCAM	1826	hgsc.bcm.edu	36	21	40589969	40589969	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DIP2A	23181	hgsc.bcm.edu	36	21	46743090	46743090	+	Missense_Mutation	SNP	C	C	G	rs7283507	byCluster;byFrequency;byHapMap	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ABCA3	21	hgsc.bcm.edu	36	16	2275644	2275644	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
THOC6	79228	hgsc.bcm.edu	36	16	3015960	3015960	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ADCY9	115	hgsc.bcm.edu	36	16	3982226	3982226	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
USP7	7874	hgsc.bcm.edu	36	16	8898376	8898376	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GRIN2A	2903	hgsc.bcm.edu	36	16	9765284	9765284	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
USP31	84196	hgsc.bcm.edu	36	16	22992573	22992573	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIAA0556	23247	hgsc.bcm.edu	36	16	27620427	27620427	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FBXL19	54620	hgsc.bcm.edu	36	16	30865597	30865597	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF423	23090	hgsc.bcm.edu	36	16	48228857	48228857	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SALL1	6299	hgsc.bcm.edu	36	16	49728778	49728778	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MMP2	4313	hgsc.bcm.edu	36	16	54096804	54096804	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CES5A	0	hgsc.bcm.edu	36	16	54438073	54438073	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HYDIN	54768	hgsc.bcm.edu	36	16	69530136	69530136	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
AP1G1	164	hgsc.bcm.edu	36	16	70362633	70362633	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DLGAP1	9229	hgsc.bcm.edu	36	18	3572068	3572068	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ANKRD12	23253	hgsc.bcm.edu	36	18	9198763	9198763	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLC14A2	8170	hgsc.bcm.edu	36	18	41516373	41516373	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ATP5A1	498	hgsc.bcm.edu	36	18	41925807	41925807	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ITPR1	3708	hgsc.bcm.edu	36	3	4799390	4799390	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FANCD2	2177	hgsc.bcm.edu	36	3	10103851	10103851	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VHL	7428	hgsc.bcm.edu	36	3	10163223	10163223	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SATB1	6304	hgsc.bcm.edu	36	3	18368553	18368553	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLC4A7	9497	hgsc.bcm.edu	36	3	27411601	27411601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DCLK3	85443	hgsc.bcm.edu	36	3	36753891	36753891	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MLH1	4292	hgsc.bcm.edu	36	3	37028594	37028594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OXSR1	9943	hgsc.bcm.edu	36	3	38264202	38264202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CTNNB1	1499	hgsc.bcm.edu	36	3	41241135	41241135	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BAP1	9223	hgsc.bcm.edu	36	3	52416252	52416252	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ITIH1	3697	hgsc.bcm.edu	36	3	52789409	52789409	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PTPRG	5793	hgsc.bcm.edu	36	3	62164618	62164618	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CD47	961	hgsc.bcm.edu	36	3	109281705	109281705	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CD96	10225	hgsc.bcm.edu	36	3	112851338	112851338	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
COPG	22820	hgsc.bcm.edu	36	3	130459151	130459151	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C3orf25	90288	hgsc.bcm.edu	36	3	130612713	130612713	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PLXND1	23129	hgsc.bcm.edu	36	3	130774441	130774441	+	Silent	SNP	T	T	C	rs2244708	byCluster;byFrequency;byHapMap	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PLXND1	23129	hgsc.bcm.edu	36	3	130775946	130775946	+	Missense_Mutation	SNP	T	T	C	rs2255703	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
COL6A6	131873	hgsc.bcm.edu	36	3	131794752	131794752	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PPP2R3A	5523	hgsc.bcm.edu	36	3	137204719	137204719	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
XRN1	54464	hgsc.bcm.edu	36	3	143623023	143623023	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLC9A9	285195	hgsc.bcm.edu	36	3	144468407	144468407	+	Missense_Mutation	SNP	T	T	C	rs2289491	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PFN2	5217	hgsc.bcm.edu	36	3	151168958	151168958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BCHE	590	hgsc.bcm.edu	36	3	167030123	167030123	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PIK3CA	5290	hgsc.bcm.edu	36	3	180418785	180418785	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CPN2	221184	hgsc.bcm.edu	36	3	195544078	195544078	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PCYT1A	5130	hgsc.bcm.edu	36	3	197481761	197481761	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BDH1	622	hgsc.bcm.edu	36	3	198757634	198757634	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CACNA2D4	93589	hgsc.bcm.edu	36	12	1773158	1773158	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VWF	7450	hgsc.bcm.edu	36	12	5997901	5997901	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NECAP1	25977	hgsc.bcm.edu	36	12	8136905	8136905	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TAS2R43	259289	hgsc.bcm.edu	36	12	11135868	11135868	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ATF7IP	55729	hgsc.bcm.edu	36	12	14468408	14468408	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C12orf60	144608	hgsc.bcm.edu	36	12	14867395	14867395	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
IFLTD1	160492	hgsc.bcm.edu	36	12	25570406	25570406	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PPFIBP1	8496	hgsc.bcm.edu	36	12	27731635	27731635	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SRSF2IP	0	hgsc.bcm.edu	36	12	44628582	44628582	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ADCY6	112	hgsc.bcm.edu	36	12	47450982	47450982	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ATF1	2668	hgsc.bcm.edu	36	12	49499696	49499696	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
IKZF4	64375	hgsc.bcm.edu	36	12	54703777	54703777	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PRIM1	5557	hgsc.bcm.edu	36	12	55414281	55414281	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MBD6	114785	hgsc.bcm.edu	36	12	56206726	56206726	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TMTC2	160335	hgsc.bcm.edu	36	12	81774967	81774967	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TMTC2	160335	hgsc.bcm.edu	36	12	81883625	81883625	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CEP290	80184	hgsc.bcm.edu	36	12	86998293	86998293	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NR2C1	7181	hgsc.bcm.edu	36	12	93969684	93969684	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
APAF1	317	hgsc.bcm.edu	36	12	97567505	97567505	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PTPN11	5781	hgsc.bcm.edu	36	12	111372541	111372541	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CCDC62	84660	hgsc.bcm.edu	36	12	121856671	121856671	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BUB1B	701	hgsc.bcm.edu	36	15	38285706	38285706	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ELL3	80237	hgsc.bcm.edu	36	15	41853750	41853750	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLC28A2	9153	hgsc.bcm.edu	36	15	43345143	43345143	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FBN1	2200	hgsc.bcm.edu	36	15	46605670	46605670	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RNF111	54778	hgsc.bcm.edu	36	15	57163628	57163628	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TLN2	83660	hgsc.bcm.edu	36	15	60818946	60818946	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PTPLAD1	51495	hgsc.bcm.edu	36	15	63636174	63636174	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FEM1B	10116	hgsc.bcm.edu	36	15	66369429	66369429	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ARID3B	10620	hgsc.bcm.edu	36	15	72623366	72623366	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TBC1D2B	23102	hgsc.bcm.edu	36	15	76092275	76092275	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ADAMTSL3	57188	hgsc.bcm.edu	36	15	82279788	82279788	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZSCAN2	54993	hgsc.bcm.edu	36	15	82964861	82964861	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KLHL25	64410	hgsc.bcm.edu	36	15	84113674	84113674	+	Silent	SNP	G	G	A	rs35444061	byFrequency	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VCX	26609	hgsc.bcm.edu	36	X	7771792	7771792	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VCX2	51480	hgsc.bcm.edu	36	X	8098137	8098137	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BEND2	139105	hgsc.bcm.edu	36	X	18131658	18131658	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TAB3	257397	hgsc.bcm.edu	36	X	30783150	30783150	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DDX3X	1654	hgsc.bcm.edu	36	X	41088453	41088453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TEX11	56159	hgsc.bcm.edu	36	X	69861893	69861893	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIAA2022	340533	hgsc.bcm.edu	36	X	73877059	73877059	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
P2RY10	27334	hgsc.bcm.edu	36	X	78102727	78102727	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CPXCR1	53336	hgsc.bcm.edu	36	X	87895470	87895470	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RAB40A	142684	hgsc.bcm.edu	36	X	102642296	102642296	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
COL4A5	1287	hgsc.bcm.edu	36	X	107750236	107750236	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DCX	1641	hgsc.bcm.edu	36	X	110442568	110442568	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ALG13	79868	hgsc.bcm.edu	36	X	110874655	110874655	+	Silent	SNP	T	T	A	rs13440710	by2Hit2Allele	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DOCK11	139818	hgsc.bcm.edu	36	X	117591989	117591989	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HTATSF1	27336	hgsc.bcm.edu	36	X	135407529	135407529	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MAGEC1	9947	hgsc.bcm.edu	36	X	140823427	140823427	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MAGEA1	4100	hgsc.bcm.edu	36	X	152135677	152135677	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OTOP1	133060	hgsc.bcm.edu	36	4	4250428	4250428	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DRD5	1816	hgsc.bcm.edu	36	4	9393640	9393640	+	Missense_Mutation	SNP	A	A	C	rs2227851	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PI4K2B	55300	hgsc.bcm.edu	36	4	24867384	24867384	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KLHL5	51088	hgsc.bcm.edu	36	4	38791161	38791161	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIT	3815	hgsc.bcm.edu	36	4	55256670	55256670	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIT	3815	hgsc.bcm.edu	36	4	55288382	55288382	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIT	3815	hgsc.bcm.edu	36	4	55288410	55288410	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIT	3815	hgsc.bcm.edu	36	4	55294062	55294062	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
AASDH	132949	hgsc.bcm.edu	36	4	56939270	56939270	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
UGT2B7	7364	hgsc.bcm.edu	36	4	70008509	70008509	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
UGT2B7	7364	hgsc.bcm.edu	36	4	70008510	70008510	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HTN3	3347	hgsc.bcm.edu	36	4	70931085	70931085	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HELQ	113510	hgsc.bcm.edu	36	4	84556969	84556969	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM190A	0	hgsc.bcm.edu	36	4	91768305	91768305	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PDHA2	5161	hgsc.bcm.edu	36	4	96981245	96981245	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ANK2	287	hgsc.bcm.edu	36	4	114503965	114503965	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TBC1D9	23158	hgsc.bcm.edu	36	4	141826963	141826963	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FBXW7	55294	hgsc.bcm.edu	36	4	153552367	153552367	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DCHS2	54798	hgsc.bcm.edu	36	4	155473870	155473870	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NEIL3	55247	hgsc.bcm.edu	36	4	178520501	178520501	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIDINS220	57498	hgsc.bcm.edu	36	2	8788928	8788928	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ODC1	89874	hgsc.bcm.edu	36	2	10502219	10502219	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ADCY3	114	hgsc.bcm.edu	36	2	24994974	24994974	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM179A	165186	hgsc.bcm.edu	36	2	29090922	29090922	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ALK	238	hgsc.bcm.edu	36	2	29299889	29299889	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TTC27	55622	hgsc.bcm.edu	36	2	32836977	32836977	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MSH2	4436	hgsc.bcm.edu	36	2	47543687	47543687	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C2orf78	388960	hgsc.bcm.edu	36	2	73897363	73897363	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TGOLN2	10618	hgsc.bcm.edu	36	2	85408561	85408561	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CNGA3	1261	hgsc.bcm.edu	36	2	98379651	98379651	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MAP4K4	9448	hgsc.bcm.edu	36	2	101822715	101822715	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
POU3F3	5455	hgsc.bcm.edu	36	2	104839466	104839466	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
IL1F6	27179	hgsc.bcm.edu	36	2	113481918	113481918	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ARHGEF4	50649	hgsc.bcm.edu	36	2	131502040	131502040	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PLEKHB2	55041	hgsc.bcm.edu	36	2	131600757	131600757	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NXPH2	11249	hgsc.bcm.edu	36	2	139145697	139145697	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LRP1B	53353	hgsc.bcm.edu	36	2	141174614	141174614	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIF5C	3800	hgsc.bcm.edu	36	2	149507492	149507492	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RIF1	55791	hgsc.bcm.edu	36	2	152028236	152028236	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NEB	4703	hgsc.bcm.edu	36	2	152290293	152290293	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SCN3A	6328	hgsc.bcm.edu	36	2	165727469	165727469	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LRP2	4036	hgsc.bcm.edu	36	2	169771291	169771291	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FASTKD1	79675	hgsc.bcm.edu	36	2	170102784	170102784	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
METTL5	29081	hgsc.bcm.edu	36	2	170386742	170386742	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MYO3B	140469	hgsc.bcm.edu	36	2	170764907	170764907	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HAT1	8520	hgsc.bcm.edu	36	2	172552465	172552465	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TTN	7273	hgsc.bcm.edu	36	2	179163134	179163134	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TTN	7273	hgsc.bcm.edu	36	2	179349760	179349760	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CERKL	375298	hgsc.bcm.edu	36	2	182111164	182111164	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GULP1	51454	hgsc.bcm.edu	36	2	189157287	189157287	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
HECW2	57520	hgsc.bcm.edu	36	2	196892799	196892799	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CASP10	843	hgsc.bcm.edu	36	2	201778883	201778883	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BARD1	580	hgsc.bcm.edu	36	2	215318697	215318697	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
AGFG1	3267	hgsc.bcm.edu	36	2	228106712	228106712	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SPATA3	130560	hgsc.bcm.edu	36	2	231569301	231569301	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NGEF	25791	hgsc.bcm.edu	36	2	233461000	233461000	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
INPP5D	3635	hgsc.bcm.edu	36	2	233698785	233698785	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
UGT1A4	54657	hgsc.bcm.edu	36	2	234292857	234292857	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KANK1	23189	hgsc.bcm.edu	36	9	702651	702651	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KDM4C	23081	hgsc.bcm.edu	36	9	7039128	7039128	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LINGO2	158038	hgsc.bcm.edu	36	9	27940127	27940127	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TLN1	7094	hgsc.bcm.edu	36	9	35707705	35707705	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TMEM8B	51754	hgsc.bcm.edu	36	9	35832575	35832575	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SPTLC1	10558	hgsc.bcm.edu	36	9	93917446	93917446	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM22F	54754	hgsc.bcm.edu	36	9	96124346	96124346	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PTCH1	5727	hgsc.bcm.edu	36	9	97269274	97269274	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C9orf174	0	hgsc.bcm.edu	36	9	99145601	99145601	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C9orf84	158401	hgsc.bcm.edu	36	9	113529996	113529996	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OR1J1	347168	hgsc.bcm.edu	36	9	124279558	124279558	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
OR1J2	26740	hgsc.bcm.edu	36	9	124313679	124313679	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
STRBP	55342	hgsc.bcm.edu	36	9	124960525	124960525	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZBTB43	23099	hgsc.bcm.edu	36	9	128635082	128635082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TSC1	7248	hgsc.bcm.edu	36	9	134787078	134787078	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NOTCH1	4851	hgsc.bcm.edu	36	9	138511019	138511019	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NOTCH1	4851	hgsc.bcm.edu	36	9	138519015	138519015	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM166A	401565	hgsc.bcm.edu	36	9	139258058	139258058	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SACS	26278	hgsc.bcm.edu	36	13	22812962	22812962	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PABPC3	5042	hgsc.bcm.edu	36	13	24569036	24569036	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ATP8A2	51761	hgsc.bcm.edu	36	13	25002793	25002793	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
BRCA2	675	hgsc.bcm.edu	36	13	31827233	31827233	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MRPS31	10240	hgsc.bcm.edu	36	13	40201711	40201711	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RCBTB2	1102	hgsc.bcm.edu	36	13	47994051	47994051	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PCDH17	27253	hgsc.bcm.edu	36	13	57106049	57106049	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TBC1D4	9882	hgsc.bcm.edu	36	13	74767051	74767051	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLITRK5	26050	hgsc.bcm.edu	36	13	87126859	87126859	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GPR18	2841	hgsc.bcm.edu	36	13	98705875	98705875	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C13orf28	122258	hgsc.bcm.edu	36	13	112078774	112078774	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GATA3	2625	hgsc.bcm.edu	36	10	8155864	8155864	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PTER	9317	hgsc.bcm.edu	36	10	16566430	16566430	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RSU1	6251	hgsc.bcm.edu	36	10	16846412	16846412	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF438	220929	hgsc.bcm.edu	36	10	31178198	31178198	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ANKRD30A	91074	hgsc.bcm.edu	36	10	37491770	37491770	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RET	5979	hgsc.bcm.edu	36	10	42928323	42928323	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RET	5979	hgsc.bcm.edu	36	10	42933845	42933845	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GPRIN2	9721	hgsc.bcm.edu	36	10	46419928	46419928	+	Missense_Mutation	SNP	G	G	T	rs4926046	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLC18A3	6572	hgsc.bcm.edu	36	10	50488996	50488996	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ANK3	288	hgsc.bcm.edu	36	10	61637876	61637876	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GRID1	2894	hgsc.bcm.edu	36	10	87618846	87618846	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PTEN	5728	hgsc.bcm.edu	36	10	89710650	89710650	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ENTPD1	953	hgsc.bcm.edu	36	10	97589520	97589520	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DNMBP	23268	hgsc.bcm.edu	36	10	101721823	101721823	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
WNT8B	7479	hgsc.bcm.edu	36	10	102229675	102229675	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RBM20	282996	hgsc.bcm.edu	36	10	112585626	112585626	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CCT5	22948	hgsc.bcm.edu	36	5	10315705	10315705	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TRIO	7204	hgsc.bcm.edu	36	5	14427354	14427354	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PRDM9	56979	hgsc.bcm.edu	36	5	23563433	23563433	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CDH10	1008	hgsc.bcm.edu	36	5	24545576	24545576	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CDH9	1007	hgsc.bcm.edu	36	5	26921558	26921558	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NIPBL	25836	hgsc.bcm.edu	36	5	37055190	37055190	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CDK7	1022	hgsc.bcm.edu	36	5	68589716	68589716	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ZNF366	167465	hgsc.bcm.edu	36	5	71792177	71792177	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VCAN	1462	hgsc.bcm.edu	36	5	82870304	82870304	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
VCAN	1462	hgsc.bcm.edu	36	5	82872762	82872762	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ARRDC3	57561	hgsc.bcm.edu	36	5	90714512	90714512	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM81B	153643	hgsc.bcm.edu	36	5	94798339	94798339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
LIX1	167410	hgsc.bcm.edu	36	5	96458274	96458274	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
APC	324	hgsc.bcm.edu	36	5	112182857	112182857	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
APC	324	hgsc.bcm.edu	36	5	112201747	112201747	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
APC	324	hgsc.bcm.edu	36	5	112203021	112203021	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
APC	324	hgsc.bcm.edu	36	5	112203313	112203313	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
APC	324	hgsc.bcm.edu	36	5	112203438	112203438	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DMXL1	1657	hgsc.bcm.edu	36	5	118473770	118473770	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PKD2L2	27039	hgsc.bcm.edu	36	5	137269983	137269983	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PCDHA9	9752	hgsc.bcm.edu	36	5	140210556	140210556	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PCDH1	5097	hgsc.bcm.edu	36	5	141223562	141223562	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ADAM19	8728	hgsc.bcm.edu	36	5	156890402	156890402	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
WWC1	23286	hgsc.bcm.edu	36	5	167813607	167813607	+	Missense_Mutation	SNP	T	T	A	rs28427161	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
WWC1	23286	hgsc.bcm.edu	36	5	167813610	167813610	+	Missense_Mutation	SNP	A	A	T	rs28421695	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FGFR4	2264	hgsc.bcm.edu	36	5	176451984	176451984	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DOK3	79930	hgsc.bcm.edu	36	5	176862780	176862780	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GYS1	2997	hgsc.bcm.edu	36	19	54177907	54177907	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
RPL13A	23521	hgsc.bcm.edu	36	19	54686797	54686797	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TSC2	7249	hgsc.bcm.edu	36	16	2062850	2062850	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
DIS3L	115752	hgsc.bcm.edu	36	15	64391115	64391115	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
COL4A1	1282	hgsc.bcm.edu	36	13	109628410	109628410	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
ANKRD30A	91074	hgsc.bcm.edu	36	10	37522119	37522119	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
APC	324	hgsc.bcm.edu	36	5	112139224	112139224	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIAA1751	85452	hgsc.bcm.edu	36	1	1876952	1876952	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KIAA1751	85452	hgsc.bcm.edu	36	1	1876972	1876972	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PHACTR4	65979	hgsc.bcm.edu	36	1	28658317	28658317	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SERINC2	347735	hgsc.bcm.edu	36	1	31678476	31678477	+	In_Frame_Ins	INS	-	-	CAG	rs3050461	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SLC35F5	80255	hgsc.bcm.edu	36	2	114216747	114216747	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
SPATA3	130560	hgsc.bcm.edu	36	2	231569277	231569303	+	In_Frame_Del	DEL	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
GK5	256356	hgsc.bcm.edu	36	3	143379075	143379076	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MAGEF1	64110	hgsc.bcm.edu	36	3	185911827	185911828	+	In_Frame_Ins	INS	-	-	TCC	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CRIPAK	285464	hgsc.bcm.edu	36	4	1378504	1378505	+	Frame_Shift_Del	DEL	CG	CG	-	rs55954740	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	CG	CG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
CRIPAK	285464	hgsc.bcm.edu	36	4	1378622	1378623	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PCDH12	51294	hgsc.bcm.edu	36	5	141305139	141305140	+	In_Frame_Ins	INS	-	-	CTGCTGCTG	rs5871792	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
C5orf60	0	hgsc.bcm.edu	36	5	179004416	179004418	+	In_Frame_Del	DEL	TCC	TCC	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	TCC	TCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM120B	84498	hgsc.bcm.edu	36	6	170469585	170469620	+	In_Frame_Del	DEL	CCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGA	CCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGA	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	CCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGA	CCCTGAATCCAGGCGAGAAGTTCCCATGTGTTCAGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
NUPL2	11097	hgsc.bcm.edu	36	7	23188322	23188323	+	In_Frame_Ins	INS	-	-	CGGCAGCAACCG	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
MUC5B	727897	hgsc.bcm.edu	36	11	1222349	1222349	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
FAM186A	121006	hgsc.bcm.edu	36	12	49032180	49032215	+	In_Frame_Del	DEL	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
PLA2G4E	123745	hgsc.bcm.edu	36	15	40089622	40089623	+	Frame_Shift_Ins	INS	-	-	CC	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
KRTAP4-1	85285	hgsc.bcm.edu	36	17	36594322	36594378	+	Frame_Shift_Del	DEL	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	-	novel	unknown	TCGA-AA-3712-01A-21D-1719-10	TCGA-AA-3712-11A-01D-1719-10	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3ea7e44f-e2e8-4e16-836a-0ce7a00e8974	6aba9dff-8531-45f0-b2fb-ece4fef78b2b
