Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
CARD11	84433	hgsc.bcm.edu	36	7	2943270	2943270	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SDK1	221935	hgsc.bcm.edu	36	7	3645194	3645194	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SDK1	221935	hgsc.bcm.edu	36	7	4120225	4120225	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RNF216	54476	hgsc.bcm.edu	36	7	5647410	5647410	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DGKB	1607	hgsc.bcm.edu	36	7	14763844	14763844	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
AHR	196	hgsc.bcm.edu	36	7	17349129	17349129	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CHN2	1124	hgsc.bcm.edu	36	7	29406691	29406691	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C7orf16	10842	hgsc.bcm.edu	36	7	31703110	31703110	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FKBP9	11328	hgsc.bcm.edu	36	7	32981419	32981419	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BMPER	168667	hgsc.bcm.edu	36	7	33976539	33976539	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CDK13	0	hgsc.bcm.edu	36	7	40099034	40099034	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DDC	1644	hgsc.bcm.edu	36	7	50564419	50564419	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
COBL	23242	hgsc.bcm.edu	36	7	51063831	51063831	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
EGFR	1956	hgsc.bcm.edu	36	7	55216595	55216595	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SBDS	51119	hgsc.bcm.edu	36	7	66093670	66093670	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TRRAP	8295	hgsc.bcm.edu	36	7	98401409	98401409	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SMO	54498	hgsc.bcm.edu	36	7	128633603	128633603	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SMO	54498	hgsc.bcm.edu	36	7	128637570	128637570	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MGAM	8972	hgsc.bcm.edu	36	7	141368563	141368563	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CNTNAP2	26047	hgsc.bcm.edu	36	7	147545371	147545371	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PDYN	5173	hgsc.bcm.edu	36	20	1909090	1909090	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SNRPB2	6629	hgsc.bcm.edu	36	20	16660404	16660404	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MYLK2	85366	hgsc.bcm.edu	36	20	29878309	29878309	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CD40	958	hgsc.bcm.edu	36	20	44191049	44191049	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BCAS1	8537	hgsc.bcm.edu	36	20	52007415	52007415	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DGCR6	8214	hgsc.bcm.edu	36	22	17278436	17278436	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NF2	4771	hgsc.bcm.edu	36	22	28365156	28365156	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
EP300	2033	hgsc.bcm.edu	36	22	39857576	39857576	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ACR	49	hgsc.bcm.edu	36	22	49525186	49525186	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ABHD4	63874	hgsc.bcm.edu	36	14	22145196	22145196	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FSCB	84075	hgsc.bcm.edu	36	14	44043617	44043617	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C14orf39	317761	hgsc.bcm.edu	36	14	59973398	59973398	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PTPN21	11099	hgsc.bcm.edu	36	14	88006114	88006114	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RPS6KA5	9252	hgsc.bcm.edu	36	14	90596491	90596491	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FBLN5	10516	hgsc.bcm.edu	36	14	91473125	91473125	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SERPINA1	5265	hgsc.bcm.edu	36	14	93917001	93917001	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
POLRMT	5442	hgsc.bcm.edu	36	19	580605	580605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
STK11	6794	hgsc.bcm.edu	36	19	1158082	1158082	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
STK11	6794	hgsc.bcm.edu	36	19	1171610	1171610	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MOBKL2A	126308	hgsc.bcm.edu	36	19	2029513	2029513	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C19orf28	126321	hgsc.bcm.edu	36	19	3498470	3498470	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF266	10781	hgsc.bcm.edu	36	19	9385701	9385701	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KRI1	65095	hgsc.bcm.edu	36	19	10531330	10531330	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SUGP1	0	hgsc.bcm.edu	36	19	19288282	19288282	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF708	7562	hgsc.bcm.edu	36	19	21285157	21285157	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C19orf2	8725	hgsc.bcm.edu	36	19	35169155	35169155	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF536	9745	hgsc.bcm.edu	36	19	35730712	35730712	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TSHZ3	57616	hgsc.bcm.edu	36	19	36460827	36460827	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DPY19L3	147991	hgsc.bcm.edu	36	19	37664892	37664892	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RHPN2	85415	hgsc.bcm.edu	36	19	38190787	38190787	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF568	374900	hgsc.bcm.edu	36	19	42132391	42132391	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PAK4	10298	hgsc.bcm.edu	36	19	44352046	44352046	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C19orf54	284325	hgsc.bcm.edu	36	19	45947512	45947512	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DMRTC2	63946	hgsc.bcm.edu	36	19	47044848	47044848	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF45	7596	hgsc.bcm.edu	36	19	49109686	49109686	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PLA2G4C	8605	hgsc.bcm.edu	36	19	53243445	53243445	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF615	284370	hgsc.bcm.edu	36	19	57188208	57188208	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF615	284370	hgsc.bcm.edu	36	19	57189364	57189364	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KIR2DL3	3804	hgsc.bcm.edu	36	19	59955724	59955724	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NLRP8	126205	hgsc.bcm.edu	36	19	61159081	61159081	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF835	90485	hgsc.bcm.edu	36	19	61876054	61876054	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CSMD1	64478	hgsc.bcm.edu	36	8	2783671	2783671	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
LPL	4023	hgsc.bcm.edu	36	8	19856136	19856136	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MCM4	4173	hgsc.bcm.edu	36	8	49051801	49051801	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NSMAF	8439	hgsc.bcm.edu	36	8	59670732	59670732	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CSPP1	79848	hgsc.bcm.edu	36	8	68265469	68265469	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CPA6	57094	hgsc.bcm.edu	36	8	68502841	68502841	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PREX2	80243	hgsc.bcm.edu	36	8	69152227	69152227	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZFHX4	79776	hgsc.bcm.edu	36	8	77930713	77930713	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CNBD1	168975	hgsc.bcm.edu	36	8	88020964	88020964	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RAD54B	25788	hgsc.bcm.edu	36	8	95539769	95539769	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KCNV1	27012	hgsc.bcm.edu	36	8	111049903	111049903	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CSMD3	114788	hgsc.bcm.edu	36	8	114057359	114057359	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SQLE	6713	hgsc.bcm.edu	36	8	126080835	126080835	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
COL22A1	169044	hgsc.bcm.edu	36	8	139959718	139959718	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PTK2	5747	hgsc.bcm.edu	36	8	141898210	141898210	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF16	7564	hgsc.bcm.edu	36	8	146128166	146128166	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
AJAP1	55966	hgsc.bcm.edu	36	1	4672384	4672384	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CHD5	450091	hgsc.bcm.edu	36	1	6106731	6106731	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MTOR	2475	hgsc.bcm.edu	36	1	11110650	11110650	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CELA2A	63036	hgsc.bcm.edu	36	1	15665170	15665170	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SPEN	64783	hgsc.bcm.edu	36	1	16128041	16128041	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
UBR4	23352	hgsc.bcm.edu	36	1	19316465	19316465	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
UBR4	23352	hgsc.bcm.edu	36	1	19316495	19316495	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KIAA0090	23065	hgsc.bcm.edu	36	1	19421880	19421880	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
E2F2	1870	hgsc.bcm.edu	36	1	23709167	23709167	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SMPDL3B	27293	hgsc.bcm.edu	36	1	28153488	28153488	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZSCAN20	7579	hgsc.bcm.edu	36	1	33729284	33729284	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ATP6V0B	533	hgsc.bcm.edu	36	1	44215349	44215349	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NRD1	4898	hgsc.bcm.edu	36	1	52032779	52032779	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZFYVE9	9372	hgsc.bcm.edu	36	1	52571104	52571104	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C1orf168	199920	hgsc.bcm.edu	36	1	56978972	56978972	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C1orf87	127795	hgsc.bcm.edu	36	1	60279281	60279281	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SGIP1	84251	hgsc.bcm.edu	36	1	66920156	66920156	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PIGK	10026	hgsc.bcm.edu	36	1	77399926	77399926	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KCNA10	3744	hgsc.bcm.edu	36	1	110862816	110862816	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
AMPD1	270	hgsc.bcm.edu	36	1	115031046	115031046	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NRAS	4893	hgsc.bcm.edu	36	1	115060268	115060268	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NOTCH2	4853	hgsc.bcm.edu	36	1	120263575	120263575	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FMO5	2330	hgsc.bcm.edu	36	1	145139680	145139680	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ACP6	51205	hgsc.bcm.edu	36	1	145593008	145593008	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ASH1L	55870	hgsc.bcm.edu	36	1	153716157	153716157	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PRCC	5546	hgsc.bcm.edu	36	1	155004478	155004478	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
OR10J3	441911	hgsc.bcm.edu	36	1	157550348	157550348	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
USF1	7391	hgsc.bcm.edu	36	1	159278102	159278102	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
POU2F1	5451	hgsc.bcm.edu	36	1	165647833	165647833	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
F5	2153	hgsc.bcm.edu	36	1	167785706	167785706	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TNN	63923	hgsc.bcm.edu	36	1	173380307	173380307	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
LAMC2	3918	hgsc.bcm.edu	36	1	181463385	181463385	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HMCN1	83872	hgsc.bcm.edu	36	1	184388578	184388578	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CFHR2	3080	hgsc.bcm.edu	36	1	195185355	195185355	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ASPM	259266	hgsc.bcm.edu	36	1	195365051	195365051	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
IPO9	55705	hgsc.bcm.edu	36	1	200107007	200107007	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SERTAD4	56256	hgsc.bcm.edu	36	1	208479472	208479472	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C1orf65	164127	hgsc.bcm.edu	36	1	221634737	221634737	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SLC35F3	148641	hgsc.bcm.edu	36	1	232518988	232518988	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RYR2	6262	hgsc.bcm.edu	36	1	236013719	236013719	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SCCPDH	51097	hgsc.bcm.edu	36	1	244956825	244956825	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF695	57116	hgsc.bcm.edu	36	1	245217122	245217122	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NLRP3	114548	hgsc.bcm.edu	36	1	245673984	245673984	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
OR2T12	127064	hgsc.bcm.edu	36	1	246524988	246524988	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
USP47	55031	hgsc.bcm.edu	36	11	11930904	11930904	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MRGPRX2	117194	hgsc.bcm.edu	36	11	19034062	19034062	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KCNA4	3739	hgsc.bcm.edu	36	11	29989458	29989458	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
OR4D10	390197	hgsc.bcm.edu	36	11	59001705	59001705	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
VWCE	220001	hgsc.bcm.edu	36	11	60805121	60805121	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BEST1	7439	hgsc.bcm.edu	36	11	61482303	61482303	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
STX5	6811	hgsc.bcm.edu	36	11	62351639	62351639	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MEN1	4221	hgsc.bcm.edu	36	11	64329204	64329204	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FRMD8	83786	hgsc.bcm.edu	36	11	64918427	64918427	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CTSF	8722	hgsc.bcm.edu	36	11	66089758	66089758	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SHANK2	22941	hgsc.bcm.edu	36	11	70507563	70507563	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C2CD3	26005	hgsc.bcm.edu	36	11	73467043	73467043	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MAP6	4135	hgsc.bcm.edu	36	11	74975777	74975777	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BIRC3	330	hgsc.bcm.edu	36	11	101701442	101701442	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MMP7	4316	hgsc.bcm.edu	36	11	101906625	101906625	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ATM	472	hgsc.bcm.edu	36	11	107705137	107705137	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
AMICA1	120425	hgsc.bcm.edu	36	11	117579493	117579493	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CBL	867	hgsc.bcm.edu	36	11	118654461	118654461	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ETS1	2113	hgsc.bcm.edu	36	11	127860025	127860025	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MYLK4	340156	hgsc.bcm.edu	36	6	2634128	2634128	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RREB1	6239	hgsc.bcm.edu	36	6	7171814	7171814	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GCM2	9247	hgsc.bcm.edu	36	6	10982863	10982863	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GMPR	2766	hgsc.bcm.edu	36	6	16398675	16398675	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF389	651302	hgsc.bcm.edu	36	6	28243032	28243032	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MOG	4340	hgsc.bcm.edu	36	6	29746141	29746141	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MRPS18B	28973	hgsc.bcm.edu	36	6	30698629	30698629	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ABHD16A	0	hgsc.bcm.edu	36	6	31777860	31777860	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ANKS1A	23294	hgsc.bcm.edu	36	6	35093234	35093234	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SRPK1	6732	hgsc.bcm.edu	36	6	35962491	35962491	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PI16	221476	hgsc.bcm.edu	36	6	37035071	37035071	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FTSJD2	23070	hgsc.bcm.edu	36	6	37528838	37528838	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BTBD9	114781	hgsc.bcm.edu	36	6	38673711	38673711	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DNAH8	1769	hgsc.bcm.edu	36	6	39027108	39027108	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CUL7	9820	hgsc.bcm.edu	36	6	43125344	43125344	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CD109	135228	hgsc.bcm.edu	36	6	74573316	74573316	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
UBE2CBP	90025	hgsc.bcm.edu	36	6	83811070	83811070	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HACE1	57531	hgsc.bcm.edu	36	6	105387658	105387658	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
LAMA4	3910	hgsc.bcm.edu	36	6	112550012	112550012	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GPRC6A	222545	hgsc.bcm.edu	36	6	117237276	117237276	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BCLAF1	9774	hgsc.bcm.edu	36	6	136641354	136641354	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TNFAIP3	7128	hgsc.bcm.edu	36	6	138234150	138234150	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C6orf97	80129	hgsc.bcm.edu	36	6	151936280	151936280	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SYNE1	23345	hgsc.bcm.edu	36	6	152607455	152607455	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SYNE1	23345	hgsc.bcm.edu	36	6	152762605	152762605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KIF25	3834	hgsc.bcm.edu	36	6	168173121	168173121	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TSR1	55720	hgsc.bcm.edu	36	17	2182236	2182236	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C1QBP	708	hgsc.bcm.edu	36	17	5282175	5282175	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TP53	7157	hgsc.bcm.edu	36	17	7517763	7517763	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TP53	7157	hgsc.bcm.edu	36	17	7518937	7518937	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TP53	7157	hgsc.bcm.edu	36	17	7520049	7520049	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DNAH2	146754	hgsc.bcm.edu	36	17	7662720	7662720	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MPRIP	23164	hgsc.bcm.edu	36	17	16886988	16886988	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NF1	4763	hgsc.bcm.edu	36	17	26521038	26521038	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NF1	4763	hgsc.bcm.edu	36	17	26533742	26533742	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NF1	4763	hgsc.bcm.edu	36	17	26570178	26570178	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PSMD11	5717	hgsc.bcm.edu	36	17	27815668	27815668	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CDK12	0	hgsc.bcm.edu	36	17	34919519	34919519	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ERBB2	2064	hgsc.bcm.edu	36	17	35121760	35121760	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KIF2B	84643	hgsc.bcm.edu	36	17	49256554	49256554	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KIF2B	84643	hgsc.bcm.edu	36	17	49257302	49257302	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BZRAP1	9256	hgsc.bcm.edu	36	17	53759078	53759078	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BCAS3	54828	hgsc.bcm.edu	36	17	56240209	56240209	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MED13	9969	hgsc.bcm.edu	36	17	57414886	57414886	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GRB2	2885	hgsc.bcm.edu	36	17	70901278	70901278	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RPTOR	57521	hgsc.bcm.edu	36	17	76497242	76497242	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CCDC137	339230	hgsc.bcm.edu	36	17	77249954	77249954	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GPS1	2873	hgsc.bcm.edu	36	17	77604513	77604513	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CSNK1D	1453	hgsc.bcm.edu	36	17	77806641	77806641	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ADAMTS1	9510	hgsc.bcm.edu	36	21	27136099	27136099	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
USP16	27005	hgsc.bcm.edu	36	21	29341010	29341010	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KRTAP6-3	337968	hgsc.bcm.edu	36	21	30886943	30886943	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RUNX1	861	hgsc.bcm.edu	36	21	35174747	35174747	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DSCR4	10281	hgsc.bcm.edu	36	21	38348854	38348854	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SLX4	0	hgsc.bcm.edu	36	16	3587925	3587925	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CREBBP	1387	hgsc.bcm.edu	36	16	3726079	3726079	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PPL	5493	hgsc.bcm.edu	36	16	4880198	4880198	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
USP7	7874	hgsc.bcm.edu	36	16	8931754	8931754	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SMG1	23049	hgsc.bcm.edu	36	16	18766327	18766327	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GDE1	51573	hgsc.bcm.edu	36	16	19423781	19423781	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GTF3C1	2975	hgsc.bcm.edu	36	16	27407090	27407090	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SRCAP	10847	hgsc.bcm.edu	36	16	30639758	30639758	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GPR114	221188	hgsc.bcm.edu	36	16	56166288	56166288	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CDH1	51343	hgsc.bcm.edu	36	16	67401684	67401684	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SF3B3	23450	hgsc.bcm.edu	36	16	69133128	69133128	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DBNDD1	79007	hgsc.bcm.edu	36	16	88600288	88600288	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C18orf19	125228	hgsc.bcm.edu	36	18	13671658	13671658	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GREB1L	0	hgsc.bcm.edu	36	18	17324043	17324043	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PSMA8	143471	hgsc.bcm.edu	36	18	21978525	21978525	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SMAD4	4089	hgsc.bcm.edu	36	18	46845909	46845909	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NEDD4L	23327	hgsc.bcm.edu	36	18	54208886	54208886	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DSEL	92126	hgsc.bcm.edu	36	18	63332456	63332456	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF236	7776	hgsc.bcm.edu	36	18	72766421	72766421	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TADA3	0	hgsc.bcm.edu	36	3	9797143	9797143	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
VHL	7428	hgsc.bcm.edu	36	3	10158615	10158615	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MLH1	4292	hgsc.bcm.edu	36	3	37064134	37064134	+	Missense_Mutation	SNP	A	A	G	rs35001569	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MLH1	4292	hgsc.bcm.edu	36	3	37065450	37065450	+	Missense_Mutation	SNP	G	G	A	rs63750217	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SCN5A	6331	hgsc.bcm.edu	36	3	38597697	38597697	+	Missense_Mutation	SNP	C	C	T	rs41313667	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ATRIP	84126	hgsc.bcm.edu	36	3	48475823	48475823	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TRAIP	10293	hgsc.bcm.edu	36	3	49856262	49856262	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BAP1	9223	hgsc.bcm.edu	36	3	52411659	52411659	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NEK4	6787	hgsc.bcm.edu	36	3	52746746	52746746	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ITIH1	3697	hgsc.bcm.edu	36	3	52787493	52787493	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C3orf63	23272	hgsc.bcm.edu	36	3	56642223	56642223	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
THOC7	80145	hgsc.bcm.edu	36	3	63795873	63795873	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PRICKLE2	166336	hgsc.bcm.edu	36	3	64060431	64060431	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
EPHA3	2042	hgsc.bcm.edu	36	3	89563135	89563135	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GPR128	84873	hgsc.bcm.edu	36	3	101896481	101896481	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GSK3B	2932	hgsc.bcm.edu	36	3	121294899	121294899	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PARP9	83666	hgsc.bcm.edu	36	3	123757627	123757627	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FAM194A	0	hgsc.bcm.edu	36	3	151860490	151860490	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MED12L	116931	hgsc.bcm.edu	36	3	152364473	152364473	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MECOM	0	hgsc.bcm.edu	36	3	170285427	170285427	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PIK3CA	5290	hgsc.bcm.edu	36	3	180399639	180399639	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PIK3CA	5290	hgsc.bcm.edu	36	3	180401875	180401875	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PIK3CA	5290	hgsc.bcm.edu	36	3	180405057	180405057	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PIK3CA	5290	hgsc.bcm.edu	36	3	180410786	180410786	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PIK3CA	5290	hgsc.bcm.edu	36	3	180418785	180418785	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HTR3E	285242	hgsc.bcm.edu	36	3	185301982	185301982	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
EIF2B5	8893	hgsc.bcm.edu	36	3	185343299	185343299	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
LEPREL1	55214	hgsc.bcm.edu	36	3	191183576	191183576	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
LRRC15	131578	hgsc.bcm.edu	36	3	195562776	195562776	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
APOD	347	hgsc.bcm.edu	36	3	196777115	196777115	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PAK2	5586	hgsc.bcm.edu	36	3	197993938	197993938	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CCDC77	84318	hgsc.bcm.edu	36	12	420054	420054	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ANO2	57101	hgsc.bcm.edu	36	12	5778976	5778976	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SLC2A3	6515	hgsc.bcm.edu	36	12	7977759	7977759	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HIST4H4	121504	hgsc.bcm.edu	36	12	14815167	14815167	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HIST4H4	121504	hgsc.bcm.edu	36	12	14815177	14815177	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KRAS	3845	hgsc.bcm.edu	36	12	25289548	25289548	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CNTN1	1272	hgsc.bcm.edu	36	12	39696948	39696948	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ARID2	196528	hgsc.bcm.edu	36	12	44519446	44519446	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PRKAG1	5571	hgsc.bcm.edu	36	12	47685211	47685211	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NCKAP5L	0	hgsc.bcm.edu	36	12	48476127	48476127	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DIP2B	57609	hgsc.bcm.edu	36	12	49358827	49358827	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ESYT1	23344	hgsc.bcm.edu	36	12	54817623	54817623	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DYRK2	8445	hgsc.bcm.edu	36	12	66337548	66337548	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
UTP20	27340	hgsc.bcm.edu	36	12	100270013	100270013	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RAD9B	144715	hgsc.bcm.edu	36	12	109444584	109444584	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ALDH2	217	hgsc.bcm.edu	36	12	110712634	110712634	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PTPN11	5781	hgsc.bcm.edu	36	12	111372586	111372586	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HNF1A	6927	hgsc.bcm.edu	36	12	119916385	119916385	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PITPNM2	57605	hgsc.bcm.edu	36	12	122037920	122037920	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DNAH10	196385	hgsc.bcm.edu	36	12	122840480	122840480	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
UBC	7316	hgsc.bcm.edu	36	12	123964115	123964115	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TMEM132D	121256	hgsc.bcm.edu	36	12	128124503	128124503	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TRIM69	140691	hgsc.bcm.edu	36	15	42846806	42846806	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MYO5C	55930	hgsc.bcm.edu	36	15	50359089	50359089	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PAQR5	54852	hgsc.bcm.edu	36	15	67464182	67464182	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
IQGAP1	8826	hgsc.bcm.edu	36	15	88820975	88820975	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
IQGAP1	8826	hgsc.bcm.edu	36	15	88830276	88830276	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BLM	641	hgsc.bcm.edu	36	15	89113754	89113754	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ARSF	416	hgsc.bcm.edu	36	X	3012505	3012505	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MXRA5	25878	hgsc.bcm.edu	36	X	3238197	3238197	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PRKX	5613	hgsc.bcm.edu	36	X	3543911	3543911	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MID1	4281	hgsc.bcm.edu	36	X	10377723	10377723	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NHS	4810	hgsc.bcm.edu	36	X	17660269	17660269	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CDKL5	6792	hgsc.bcm.edu	36	X	18532087	18532087	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MAP7D2	256714	hgsc.bcm.edu	36	X	19938875	19938875	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
POLA1	5422	hgsc.bcm.edu	36	X	24631323	24631323	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TSPAN7	7102	hgsc.bcm.edu	36	X	38415585	38415585	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BCOR	54880	hgsc.bcm.edu	36	X	39807016	39807016	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DDX3X	1654	hgsc.bcm.edu	36	X	41088453	41088453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZNF674	641339	hgsc.bcm.edu	36	X	46244272	46244272	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SYN1	6853	hgsc.bcm.edu	36	X	47319087	47319087	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GATA1	2623	hgsc.bcm.edu	36	X	48534509	48534509	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GATA1	2623	hgsc.bcm.edu	36	X	48534548	48534548	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
AKAP4	8852	hgsc.bcm.edu	36	X	49845489	49845489	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
IQSEC2	23096	hgsc.bcm.edu	36	X	53287692	53287692	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PHF8	23133	hgsc.bcm.edu	36	X	54028158	54028158	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ITIH5L	347365	hgsc.bcm.edu	36	X	54834141	54834141	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
EFNB1	1947	hgsc.bcm.edu	36	X	67977101	67977101	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FAM155B	27112	hgsc.bcm.edu	36	X	68642410	68642410	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BHLHB9	80823	hgsc.bcm.edu	36	X	101890759	101890759	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NKRF	55922	hgsc.bcm.edu	36	X	118607770	118607770	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
AIFM1	9131	hgsc.bcm.edu	36	X	129093440	129093440	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ARHGAP36	0	hgsc.bcm.edu	36	X	130048249	130048249	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GABRQ	55879	hgsc.bcm.edu	36	X	151568882	151568882	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MAGEA1	4100	hgsc.bcm.edu	36	X	152135372	152135372	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SLC10A3	8273	hgsc.bcm.edu	36	X	153369636	153369636	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PROM1	8842	hgsc.bcm.edu	36	4	15602000	15602000	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CDKL2	8999	hgsc.bcm.edu	36	4	76758533	76758533	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FRAS1	80144	hgsc.bcm.edu	36	4	79579147	79579147	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DKK2	27123	hgsc.bcm.edu	36	4	108064679	108064679	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
OTUD4	54726	hgsc.bcm.edu	36	4	146278261	146278261	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DDX60L	91351	hgsc.bcm.edu	36	4	169542465	169542465	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MYCN	4613	hgsc.bcm.edu	36	2	16003349	16003349	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KCNS3	3790	hgsc.bcm.edu	36	2	17977147	17977147	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TCF23	150921	hgsc.bcm.edu	36	2	27226553	27226553	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TTC27	55622	hgsc.bcm.edu	36	2	32836977	32836977	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
KIAA1841	84542	hgsc.bcm.edu	36	2	61163886	61163886	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MDH1	4190	hgsc.bcm.edu	36	2	63687513	63687513	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CLEC4F	165530	hgsc.bcm.edu	36	2	70896853	70896853	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DYSF	8291	hgsc.bcm.edu	36	2	71615936	71615936	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SNRNP200	23020	hgsc.bcm.edu	36	2	96332778	96332778	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CHST10	9486	hgsc.bcm.edu	36	2	100380927	100380927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BUB1	699	hgsc.bcm.edu	36	2	111148365	111148365	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MERTK	10461	hgsc.bcm.edu	36	2	112478014	112478014	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
INSIG2	51141	hgsc.bcm.edu	36	2	118577263	118577263	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GLI2	2736	hgsc.bcm.edu	36	2	121401445	121401445	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CYP27C1	339761	hgsc.bcm.edu	36	2	127667195	127667195	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
YSK4	80122	hgsc.bcm.edu	36	2	135472904	135472904	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RIF1	55791	hgsc.bcm.edu	36	2	152028439	152028439	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SCN1A	6323	hgsc.bcm.edu	36	2	166600992	166600992	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MYO3B	140469	hgsc.bcm.edu	36	2	170964959	170964959	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PDE11A	50940	hgsc.bcm.edu	36	2	178202429	178202429	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
OSBPL6	114880	hgsc.bcm.edu	36	2	178912678	178912678	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
COL3A1	1281	hgsc.bcm.edu	36	2	189564485	189564485	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
COL5A2	1290	hgsc.bcm.edu	36	2	189641014	189641014	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
UNC80	285175	hgsc.bcm.edu	36	2	210346071	210346071	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FAM134A	79137	hgsc.bcm.edu	36	2	219753077	219753077	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FAM134A	79137	hgsc.bcm.edu	36	2	219755321	219755321	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SPHKAP	80309	hgsc.bcm.edu	36	2	228592597	228592597	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NCL	4691	hgsc.bcm.edu	36	2	232028561	232028561	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
JAK2	3717	hgsc.bcm.edu	36	9	5060003	5060003	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TOPORS	10210	hgsc.bcm.edu	36	9	32532995	32532995	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TOPORS	10210	hgsc.bcm.edu	36	9	32534141	32534141	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CA9	768	hgsc.bcm.edu	36	9	35664151	35664151	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HRCT1	646962	hgsc.bcm.edu	36	9	35896403	35896403	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PRKACG	5568	hgsc.bcm.edu	36	9	70818202	70818202	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PCSK5	5125	hgsc.bcm.edu	36	9	77974504	77974504	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PTCH1	5727	hgsc.bcm.edu	36	9	97269417	97269417	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SMC2	10592	hgsc.bcm.edu	36	9	105904554	105904554	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
COL27A1	85301	hgsc.bcm.edu	36	9	116092925	116092925	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TNC	7134	hgsc.bcm.edu	36	9	116886321	116886321	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
OR1J2	26740	hgsc.bcm.edu	36	9	124313083	124313083	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CIZ1	25792	hgsc.bcm.edu	36	9	129980895	129980895	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ZER1	10444	hgsc.bcm.edu	36	9	130555995	130555995	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ADAMTS13	11093	hgsc.bcm.edu	36	9	135310505	135310505	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
COL5A1	1289	hgsc.bcm.edu	36	9	136850331	136850331	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NOTCH1	4851	hgsc.bcm.edu	36	9	138511069	138511069	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ATP8A2	51761	hgsc.bcm.edu	36	13	25042926	25042926	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FLT3	2322	hgsc.bcm.edu	36	13	27490641	27490641	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FREM2	341640	hgsc.bcm.edu	36	13	38163079	38163079	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
WBP4	11193	hgsc.bcm.edu	36	13	40537196	40537196	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HTR2A	3356	hgsc.bcm.edu	36	13	46367926	46367926	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TRIM13	10206	hgsc.bcm.edu	36	13	49484660	49484660	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PCDH20	64881	hgsc.bcm.edu	36	13	60884436	60884436	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PIBF1	10464	hgsc.bcm.edu	36	13	72326218	72326218	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
LARP4B	23185	hgsc.bcm.edu	36	10	861158	861158	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PRKCQ	5588	hgsc.bcm.edu	36	10	6573722	6573722	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NMT2	9397	hgsc.bcm.edu	36	10	15201475	15201475	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SVIL	6840	hgsc.bcm.edu	36	10	29861014	29861014	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HNRNPH3	3189	hgsc.bcm.edu	36	10	69771799	69771799	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ANAPC16	0	hgsc.bcm.edu	36	10	73653809	73653809	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
OPN4	94233	hgsc.bcm.edu	36	10	88409708	88409708	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PTEN	5728	hgsc.bcm.edu	36	10	89614208	89614208	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PTEN	5728	hgsc.bcm.edu	36	10	89614224	89614224	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PTEN	5728	hgsc.bcm.edu	36	10	89701876	89701876	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PTEN	5728	hgsc.bcm.edu	36	10	89710802	89710802	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CC2D2B	387707	hgsc.bcm.edu	36	10	97762440	97762440	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BTRC	8945	hgsc.bcm.edu	36	10	103281050	103281050	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CALHM3	119395	hgsc.bcm.edu	36	10	105223356	105223356	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ADD3	120	hgsc.bcm.edu	36	10	111882094	111882094	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
NHLRC2	374354	hgsc.bcm.edu	36	10	115658196	115658196	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PNLIP	5406	hgsc.bcm.edu	36	10	118308709	118308709	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SFXN4	119559	hgsc.bcm.edu	36	10	120910457	120910457	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DHX32	55760	hgsc.bcm.edu	36	10	127538385	127538385	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SLC45A2	51151	hgsc.bcm.edu	36	5	33980633	33980633	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DAB2	1601	hgsc.bcm.edu	36	5	39429206	39429206	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
DIMT1L	27292	hgsc.bcm.edu	36	5	61730452	61730452	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
PIK3R1	5295	hgsc.bcm.edu	36	5	67626842	67626842	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
APC	324	hgsc.bcm.edu	36	5	112190790	112190790	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
APC	324	hgsc.bcm.edu	36	5	112201752	112201752	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
APC	324	hgsc.bcm.edu	36	5	112203075	112203075	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
APC	324	hgsc.bcm.edu	36	5	112203129	112203129	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
HSPA4	3308	hgsc.bcm.edu	36	5	132467550	132467550	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
CAMK2A	815	hgsc.bcm.edu	36	5	149610558	149610558	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
LARP1	23367	hgsc.bcm.edu	36	5	154171023	154171023	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ADAM19	8728	hgsc.bcm.edu	36	5	156849980	156849980	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ATP10B	23120	hgsc.bcm.edu	36	5	159929240	159929240	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GABRA6	2559	hgsc.bcm.edu	36	5	161051639	161051639	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SLIT3	6586	hgsc.bcm.edu	36	5	168145502	168145502	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
BOD1	91272	hgsc.bcm.edu	36	5	172972861	172972861	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SNCB	6620	hgsc.bcm.edu	36	5	175980867	175980867	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
GRM6	2916	hgsc.bcm.edu	36	5	178346089	178346089	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
APC	324	hgsc.bcm.edu	36	5	112203665	112203665	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RNF145	153830	hgsc.bcm.edu	36	5	158563208	158563208	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
MZT1	0	hgsc.bcm.edu	36	13	72199719	72199729	+	Frame_Shift_Del	DEL	CCAGCACCGCT	CCAGCACCGCT	-	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	CCAGCACCGCT	CCAGCACCGCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C14orf43	91748	hgsc.bcm.edu	36	14	73276358	73276359	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RIN3	79890	hgsc.bcm.edu	36	14	92224291	92224293	+	In_Frame_Del	DEL	GGC	GGC	-	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	GGC	GGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
ADCY7	113	hgsc.bcm.edu	36	16	48898486	48898487	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
SF3B3	23450	hgsc.bcm.edu	36	16	69120584	69120585	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
C19orf55	148137	hgsc.bcm.edu	36	19	40950778	40950778	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
TOX2	84969	hgsc.bcm.edu	36	20	42127972	42127973	+	In_Frame_Ins	INS	-	-	CCG	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
RBM38	55544	hgsc.bcm.edu	36	20	55400099	55400100	+	Frame_Shift_Ins	INS	-	-	C	rs11481309	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
FAAH2	158584	hgsc.bcm.edu	36	X	57424106	57424106	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AY-5543-01A-01D-1650-10	TCGA-AY-5543-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	86657ce2-f6e9-48e8-8dae-7ea848fb319f	dac36d55-6ac3-4911-8af6-4f8cb5acfa31
