Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
RADIL	55698	hgsc.bcm.edu	36	7	4883808	4883808	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RNF216	54476	hgsc.bcm.edu	36	7	5747471	5747471	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
EIF2AK1	27102	hgsc.bcm.edu	36	7	6047261	6047261	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TWISTNB	221830	hgsc.bcm.edu	36	7	19704535	19704535	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ITGB8	3696	hgsc.bcm.edu	36	7	20410907	20410907	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
NUPL2	11097	hgsc.bcm.edu	36	7	23205638	23205638	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ANLN	54443	hgsc.bcm.edu	36	7	36413874	36413874	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
NPC1L1	29881	hgsc.bcm.edu	36	7	44522980	44522980	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
EGFR	1956	hgsc.bcm.edu	36	7	55209172	55209172	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
HIP1	3092	hgsc.bcm.edu	36	7	75025481	75025481	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ABCB1	5243	hgsc.bcm.edu	36	7	87011426	87011426	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MET	8731	hgsc.bcm.edu	36	7	116126877	116126877	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
POT1	25913	hgsc.bcm.edu	36	7	124268390	124268390	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SND1	27044	hgsc.bcm.edu	36	7	127271624	127271624	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TRIM24	8805	hgsc.bcm.edu	36	7	137906139	137906139	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
BRAF	673	hgsc.bcm.edu	36	7	140095642	140095642	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MGAM	8972	hgsc.bcm.edu	36	7	141380998	141380998	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CASP2	835	hgsc.bcm.edu	36	7	142711093	142711093	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MLL3	58508	hgsc.bcm.edu	36	7	151593144	151593144	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TMC2	117532	hgsc.bcm.edu	36	20	2553004	2553004	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PAK7	57144	hgsc.bcm.edu	36	20	9491631	9491631	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TTLL9	164395	hgsc.bcm.edu	36	20	29994411	29994411	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CDK5RAP1	51654	hgsc.bcm.edu	36	20	31437194	31437194	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CTNNBL1	56259	hgsc.bcm.edu	36	20	35922122	35922122	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
YWHAB	7529	hgsc.bcm.edu	36	20	42966058	42966058	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
STAU1	6780	hgsc.bcm.edu	36	20	47185799	47185799	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PTPN1	5770	hgsc.bcm.edu	36	20	48631370	48631370	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ATP9A	10079	hgsc.bcm.edu	36	20	49726101	49726101	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GNAS	2778	hgsc.bcm.edu	36	20	56917816	56917816	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
OGFR	11054	hgsc.bcm.edu	36	20	60915014	60915014	+	Silent	SNP	A	A	G	rs3204348	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
NF2	4771	hgsc.bcm.edu	36	22	28362795	28362795	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FOXRED2	80020	hgsc.bcm.edu	36	22	35231971	35231971	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
NIN	51199	hgsc.bcm.edu	36	14	50291090	50291090	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
DLGAP5	9787	hgsc.bcm.edu	36	14	54711847	54711847	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SYNE2	23224	hgsc.bcm.edu	36	14	63751817	63751817	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ALKBH1	8846	hgsc.bcm.edu	36	14	77230865	77230865	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TSHR	7253	hgsc.bcm.edu	36	14	80680185	80680185	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TRIP11	9321	hgsc.bcm.edu	36	14	91542436	91542436	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ARHGEF18	23370	hgsc.bcm.edu	36	19	7429467	7429467	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FCER2	2208	hgsc.bcm.edu	36	19	7661056	7661056	+	Silent	SNP	G	G	A	rs2228138	byCluster;byFrequency	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SMARCA4	6597	hgsc.bcm.edu	36	19	10993439	10993439	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GCDH	2639	hgsc.bcm.edu	36	19	12868165	12868165	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
OR7C1	26664	hgsc.bcm.edu	36	19	14771585	14771585	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RYR1	6261	hgsc.bcm.edu	36	19	43656118	43656118	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
DLGAP2	9228	hgsc.bcm.edu	36	8	1485241	1485241	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ARHGEF10	9639	hgsc.bcm.edu	36	8	1812216	1812216	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CRISPLD1	83690	hgsc.bcm.edu	36	8	76087269	76087269	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CSMD3	114788	hgsc.bcm.edu	36	8	113325859	113325859	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ASAP1	50807	hgsc.bcm.edu	36	8	131197069	131197069	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MORN1	79906	hgsc.bcm.edu	36	1	2307193	2307193	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PLCH2	9651	hgsc.bcm.edu	36	1	2410547	2410547	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
VPS13D	55187	hgsc.bcm.edu	36	1	12255737	12255737	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PRAMEF12	390999	hgsc.bcm.edu	36	1	12759908	12759908	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SPEN	64783	hgsc.bcm.edu	36	1	16133868	16133868	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CROCC	9696	hgsc.bcm.edu	36	1	17139173	17139173	+	Missense_Mutation	SNP	C	C	A	rs45452999	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ARID1A	8289	hgsc.bcm.edu	36	1	26928832	26928832	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GMEB1	10691	hgsc.bcm.edu	36	1	28913306	28913306	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
C1orf190	541468	hgsc.bcm.edu	36	1	46441793	46441793	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
NEXN	91624	hgsc.bcm.edu	36	1	78155935	78155935	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
VAV3	10451	hgsc.bcm.edu	36	1	108112633	108112633	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
DDX20	11218	hgsc.bcm.edu	36	1	112110176	112110176	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FAM46C	54855	hgsc.bcm.edu	36	1	117967771	117967771	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FMO5	2330	hgsc.bcm.edu	36	1	145139681	145139681	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FCRL5	83416	hgsc.bcm.edu	36	1	155764297	155764297	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
LAMC1	3915	hgsc.bcm.edu	36	1	181346371	181346371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CAMSAP1L1	23271	hgsc.bcm.edu	36	1	198996696	198996696	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CR1	1378	hgsc.bcm.edu	36	1	205854376	205854376	+	Nonsense_Mutation	SNP	C	C	T	rs55749440	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PSMD13	5719	hgsc.bcm.edu	36	11	237370	237370	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
OR2AG2	338755	hgsc.bcm.edu	36	11	6745955	6745955	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
WT1	7490	hgsc.bcm.edu	36	11	32374521	32374521	+	Silent	SNP	T	T	C	rs16754	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PTPRJ	5795	hgsc.bcm.edu	36	11	48128224	48128224	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SF1	7536	hgsc.bcm.edu	36	11	64300623	64300623	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PITPNM1	9600	hgsc.bcm.edu	36	11	67026079	67026079	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PAAF1	80227	hgsc.bcm.edu	36	11	73289043	73289043	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TMEM126A	84233	hgsc.bcm.edu	36	11	85042847	85042847	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MTNR1B	4544	hgsc.bcm.edu	36	11	92354586	92354586	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CASP4	837	hgsc.bcm.edu	36	11	104325503	104325503	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ATM	472	hgsc.bcm.edu	36	11	107627840	107627840	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ATM	472	hgsc.bcm.edu	36	11	107705148	107705148	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RBM7	10179	hgsc.bcm.edu	36	11	113783437	113783437	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TMPRSS13	84000	hgsc.bcm.edu	36	11	117294577	117294577	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MLL	4297	hgsc.bcm.edu	36	11	117873917	117873917	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CBL	867	hgsc.bcm.edu	36	11	118654213	118654213	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ADAMTS15	170689	hgsc.bcm.edu	36	11	129837703	129837703	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ZNF184	7738	hgsc.bcm.edu	36	6	27527685	27527685	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
HLA-E	3133	hgsc.bcm.edu	36	6	30568321	30568321	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CNPY3	10695	hgsc.bcm.edu	36	6	43013517	43013517	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PPP2R5D	5528	hgsc.bcm.edu	36	6	43082710	43082710	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GPR115	221393	hgsc.bcm.edu	36	6	47788128	47788128	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
COL12A1	1303	hgsc.bcm.edu	36	6	75918832	75918832	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
IBTK	25998	hgsc.bcm.edu	36	6	82977994	82977994	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ASCC3	10973	hgsc.bcm.edu	36	6	101161624	101161624	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TRPV3	162514	hgsc.bcm.edu	36	17	3371025	3371025	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SMTNL2	342527	hgsc.bcm.edu	36	17	4446989	4446989	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TP53	7157	hgsc.bcm.edu	36	17	7519259	7519259	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MFAP4	4239	hgsc.bcm.edu	36	17	19230701	19230701	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ALDH3A2	224	hgsc.bcm.edu	36	17	19515741	19515741	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
LRRC37B	114659	hgsc.bcm.edu	36	17	27400348	27400348	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MLLT6	4302	hgsc.bcm.edu	36	17	34127729	34127729	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
BRCA1	672	hgsc.bcm.edu	36	17	38498047	38498047	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ABCA5	23461	hgsc.bcm.edu	36	17	64778399	64778399	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
USP25	29761	hgsc.bcm.edu	36	21	16172022	16172022	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RUNX1	861	hgsc.bcm.edu	36	21	35153734	35153734	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
DSCAM	1826	hgsc.bcm.edu	36	21	40306968	40306968	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GPR139	124274	hgsc.bcm.edu	36	16	19951144	19951144	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
NUPR1	26471	hgsc.bcm.edu	36	16	28456957	28456957	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ITGAX	3687	hgsc.bcm.edu	36	16	31276126	31276126	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SALL1	6299	hgsc.bcm.edu	36	16	49733283	49733283	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CES5A	0	hgsc.bcm.edu	36	16	54452928	54452928	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
LRRC36	55282	hgsc.bcm.edu	36	16	65958592	65958592	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SMAD4	4089	hgsc.bcm.edu	36	18	46847395	46847395	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RAD18	56852	hgsc.bcm.edu	36	3	8898064	8898064	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
VHL	7428	hgsc.bcm.edu	36	3	10163212	10163212	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ANKRD28	23243	hgsc.bcm.edu	36	3	15702741	15702741	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CLASP2	23122	hgsc.bcm.edu	36	3	33700902	33700902	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CCR8	1237	hgsc.bcm.edu	36	3	39349520	39349520	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RTP3	83597	hgsc.bcm.edu	36	3	46514654	46514654	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SHQ1	55164	hgsc.bcm.edu	36	3	72949146	72949146	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ROBO2	6092	hgsc.bcm.edu	36	3	77720700	77720700	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
EPHA3	2042	hgsc.bcm.edu	36	3	89473803	89473803	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GABRR3	200959	hgsc.bcm.edu	36	3	99213995	99213995	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
OR5H6	79295	hgsc.bcm.edu	36	3	99466660	99466660	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SLC9A10	285335	hgsc.bcm.edu	36	3	113370773	113370773	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CCDC80	151887	hgsc.bcm.edu	36	3	113839676	113839676	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ATP6V1A	523	hgsc.bcm.edu	36	3	114999969	114999969	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GRAMD1C	54762	hgsc.bcm.edu	36	3	115105755	115105755	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MRPS22	56945	hgsc.bcm.edu	36	3	140548472	140548472	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PHC3	80012	hgsc.bcm.edu	36	3	171329302	171329302	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CLDN11	5010	hgsc.bcm.edu	36	3	171623719	171623719	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SLC7A14	57709	hgsc.bcm.edu	36	3	171667691	171667691	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PIK3CA	5290	hgsc.bcm.edu	36	3	180399421	180399421	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PIK3CA	5290	hgsc.bcm.edu	36	3	180421630	180421630	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PIK3CA	5290	hgsc.bcm.edu	36	3	180434675	180434675	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MUC4	4585	hgsc.bcm.edu	36	3	197000832	197000832	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SOX5	6660	hgsc.bcm.edu	36	12	23607544	23607544	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CASC1	55259	hgsc.bcm.edu	36	12	25188760	25188760	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
KRT1	3848	hgsc.bcm.edu	36	12	51360315	51360315	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
IKZF4	64375	hgsc.bcm.edu	36	12	54703777	54703777	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
HELB	92797	hgsc.bcm.edu	36	12	64990170	64990170	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
LRRIQ1	84125	hgsc.bcm.edu	36	12	83973689	83973689	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RSRC2	65117	hgsc.bcm.edu	36	12	121572738	121572738	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
UBE3A	7337	hgsc.bcm.edu	36	15	23136370	23136370	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ZSCAN29	146050	hgsc.bcm.edu	36	15	41446029	41446029	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FBN1	2200	hgsc.bcm.edu	36	15	46575608	46575608	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
C15orf33	196951	hgsc.bcm.edu	36	15	47669376	47669376	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PYGO1	26108	hgsc.bcm.edu	36	15	53628417	53628417	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
LOXL1	4016	hgsc.bcm.edu	36	15	72022335	72022335	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ADAMTSL3	57188	hgsc.bcm.edu	36	15	82442800	82442800	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FAM9A	171482	hgsc.bcm.edu	36	X	8728148	8728148	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ACE2	59272	hgsc.bcm.edu	36	X	15495856	15495856	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
BEND2	139105	hgsc.bcm.edu	36	X	18105634	18105634	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PHEX	5251	hgsc.bcm.edu	36	X	22039574	22039574	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
IL1RAPL1	11141	hgsc.bcm.edu	36	X	29848011	29848011	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CXorf22	170063	hgsc.bcm.edu	36	X	35898823	35898823	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
HUWE1	10075	hgsc.bcm.edu	36	X	53672270	53672270	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ITIH5L	347365	hgsc.bcm.edu	36	X	54794259	54794259	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PAGE2	203569	hgsc.bcm.edu	36	X	55134518	55134518	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MTMR8	66036	hgsc.bcm.edu	36	X	63491411	63491411	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TRMT2B	79979	hgsc.bcm.edu	36	X	100163626	100163626	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ZBTB33	10009	hgsc.bcm.edu	36	X	119272354	119272354	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
DCAF12L2	0	hgsc.bcm.edu	36	X	125127121	125127121	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ZDHHC9	51114	hgsc.bcm.edu	36	X	128785367	128785367	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GPR112	139378	hgsc.bcm.edu	36	X	135255176	135255176	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PNMA3	29944	hgsc.bcm.edu	36	X	151977119	151977119	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SEL1L3	0	hgsc.bcm.edu	36	4	25369728	25369728	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RFC1	6573	hgsc.bcm.edu	36	4	38990796	38990796	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
YTHDC1	91746	hgsc.bcm.edu	36	4	68862527	68862527	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MUC7	4589	hgsc.bcm.edu	36	4	71381235	71381235	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
LARP7	51574	hgsc.bcm.edu	36	4	113791074	113791074	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
KIAA1109	84162	hgsc.bcm.edu	36	4	123416625	123416625	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
MAB21L2	10586	hgsc.bcm.edu	36	4	151724498	151724498	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RWDD4	0	hgsc.bcm.edu	36	4	184809194	184809194	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
E2F6	1876	hgsc.bcm.edu	36	2	11505263	11505263	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SPAST	6683	hgsc.bcm.edu	36	2	32215158	32215158	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RASGRP3	25780	hgsc.bcm.edu	36	2	33612923	33612923	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CCDC88A	55704	hgsc.bcm.edu	36	2	55443009	55443009	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TRIM43	129868	hgsc.bcm.edu	36	2	95625789	95625789	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
POLR1B	84172	hgsc.bcm.edu	36	2	113042124	113042124	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SPOPL	339745	hgsc.bcm.edu	36	2	139024948	139024948	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RIF1	55791	hgsc.bcm.edu	36	2	152028439	152028439	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PDE11A	50940	hgsc.bcm.edu	36	2	178587324	178587324	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TTN	7273	hgsc.bcm.edu	36	2	179123134	179123134	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CERKL	375298	hgsc.bcm.edu	36	2	182111164	182111164	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ALS2	57679	hgsc.bcm.edu	36	2	202327531	202327531	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GIGYF2	26058	hgsc.bcm.edu	36	2	233367826	233367826	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
COL6A3	1293	hgsc.bcm.edu	36	2	237948276	237948276	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TRAF3IP1	26146	hgsc.bcm.edu	36	2	238929448	238929448	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SLC24A2	123041	hgsc.bcm.edu	36	9	19776305	19776305	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PIGO	84720	hgsc.bcm.edu	36	9	35081830	35081830	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GRIN3A	116443	hgsc.bcm.edu	36	9	103539605	103539605	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TNFSF15	9966	hgsc.bcm.edu	36	9	116592724	116592724	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RPL12	6136	hgsc.bcm.edu	36	9	129249977	129249977	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TUBA3C	7278	hgsc.bcm.edu	36	13	18649435	18649435	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GJB6	10804	hgsc.bcm.edu	36	13	19695041	19695041	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FLT1	2321	hgsc.bcm.edu	36	13	27817596	27817596	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
BRCA2	675	hgsc.bcm.edu	36	13	31798680	31798680	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
DCLK1	9201	hgsc.bcm.edu	36	13	35584118	35584118	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FREM2	341640	hgsc.bcm.edu	36	13	38162384	38162384	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
DGKH	160851	hgsc.bcm.edu	36	13	41691920	41691920	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RB1	5925	hgsc.bcm.edu	36	13	47853572	47853572	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
UGGT2	0	hgsc.bcm.edu	36	13	95376003	95376003	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TM9SF2	9375	hgsc.bcm.edu	36	13	99005866	99005866	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ITGBL1	9358	hgsc.bcm.edu	36	13	101018074	101018074	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TMCO3	55002	hgsc.bcm.edu	36	13	113198309	113198309	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CUBN	8029	hgsc.bcm.edu	36	10	17002119	17002119	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GPR158	57512	hgsc.bcm.edu	36	10	25741301	25741301	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RBP3	5949	hgsc.bcm.edu	36	10	48008560	48008560	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PCDH15	65217	hgsc.bcm.edu	36	10	55582949	55582949	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PTEN	5728	hgsc.bcm.edu	36	10	89682940	89682940	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PTEN	5728	hgsc.bcm.edu	36	10	89710707	89710707	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SLK	9748	hgsc.bcm.edu	36	10	105753255	105753255	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CDH10	1008	hgsc.bcm.edu	36	5	24629199	24629199	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
APC	324	hgsc.bcm.edu	36	5	112204716	112204716	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
AFF4	27125	hgsc.bcm.edu	36	5	132298122	132298122	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
KDM3B	51780	hgsc.bcm.edu	36	5	137736318	137736318	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
POU4F3	5459	hgsc.bcm.edu	36	5	145700188	145700188	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
PDGFRB	5159	hgsc.bcm.edu	36	5	149475547	149475547	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
GRM6	2916	hgsc.bcm.edu	36	5	178342748	178342748	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ADAMTS2	9509	hgsc.bcm.edu	36	5	178513730	178513730	+	Silent	SNP	C	C	T	rs41285549	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SEC61G	23480	hgsc.bcm.edu	36	7	54792783	54792783	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
KCNT2	343450	hgsc.bcm.edu	36	1	194634315	194634315	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
SORL1	6653	hgsc.bcm.edu	36	11	120965176	120965176	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
EDC3	80153	hgsc.bcm.edu	36	15	72751170	72751170	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
IGSF3	3321	hgsc.bcm.edu	36	1	116923808	116923809	+	In_Frame_Ins	INS	-	-	TCC	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
LCE4A	199834	hgsc.bcm.edu	36	1	150948304	150948305	+	In_Frame_Ins	INS	-	-	AGCTCTGGGGGCTGCTGT	rs6143428	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
HADHA	3030	hgsc.bcm.edu	36	2	26310595	26310597	+	In_Frame_Del	DEL	TCC	TCC	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	TCC	TCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
TMEM37	140738	hgsc.bcm.edu	36	2	119911121	119911122	+	In_Frame_Ins	INS	-	-	GTGTGC	rs3217464	byCluster	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RFC4	5984	hgsc.bcm.edu	36	3	187990470	187990471	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
APC	324	hgsc.bcm.edu	36	5	112139274	112139274	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ABCF1	23	hgsc.bcm.edu	36	6	30653833	30653833	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
FNDC1	84624	hgsc.bcm.edu	36	6	159580770	159580787	+	In_Frame_Del	DEL	CCACCACCCGCCGCACGA	CCACCACCCGCCGCACGA	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	CCACCACCCGCCGCACGA	CCACCACCCGCCGCACGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ZP3	7784	hgsc.bcm.edu	36	7	75909119	75909120	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
RP1L1	94137	hgsc.bcm.edu	36	8	10504927	10504928	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
INPP5F	22876	hgsc.bcm.edu	36	10	121557437	121557437	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
CDON	50937	hgsc.bcm.edu	36	11	125385558	125385565	+	Frame_Shift_Del	DEL	AGCTTGGG	AGCTTGGG	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	AGCTTGGG	AGCTTGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
ABCA8	10351	hgsc.bcm.edu	36	17	64392978	64392978	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
UHRF1	29128	hgsc.bcm.edu	36	19	4905679	4905680	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
KRTAP10-7	386675	hgsc.bcm.edu	36	21	44845084	44845098	+	Frame_Shift_Del	DEL	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
NEFH	4744	hgsc.bcm.edu	36	22	28215589	28215590	+	In_Frame_Ins	INS	-	-	CCCCTGAGAAGGCCAAGT	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
BAIAP2L2	80115	hgsc.bcm.edu	36	22	36812299	36812340	+	In_Frame_Del	DEL	TGCGGGAGCGGGACTGGCCATCCCAGTACTCCGAGGGTGCTA	TGCGGGAGCGGGACTGGCCATCCCAGTACTCCGAGGGTGCTA	-	novel	unknown	TCGA-AZ-6603-01A-11D-1835-10	TCGA-AZ-6603-11A-02D-1835-10	TGCGGGAGCGGGACTGGCCATCCCAGTACTCCGAGGGTGCTA	TGCGGGAGCGGGACTGGCCATCCCAGTACTCCGAGGGTGCTA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f1523303-d3aa-4ab1-bcf2-8cbec627b32f	ffdf152f-9a07-41dd-9713-584483be1320
