Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
ZFAND2A	90637	hgsc.bcm.edu	36	7	1159386	1159386	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LFNG	3955	hgsc.bcm.edu	36	7	2531662	2531662	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KDELR2	11014	hgsc.bcm.edu	36	7	6469327	6469327	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DGKB	1607	hgsc.bcm.edu	36	7	14691488	14691488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
HERPUD2	64224	hgsc.bcm.edu	36	7	35679398	35679398	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ABCA13	154664	hgsc.bcm.edu	36	7	48286429	48286429	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
EGFR	1956	hgsc.bcm.edu	36	7	55200531	55200531	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
STAG3L4	64940	hgsc.bcm.edu	36	7	66412039	66412039	+	Missense_Mutation	SNP	G	G	C	rs1045513	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
WBSCR17	64409	hgsc.bcm.edu	36	7	70772955	70772955	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SRCRB4D	136853	hgsc.bcm.edu	36	7	75867631	75867631	+	Missense_Mutation	SNP	C	C	T	rs4728712	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DTX2	113878	hgsc.bcm.edu	36	7	75949771	75949771	+	Silent	SNP	G	G	A	rs4236506	by2Hit2Allele;byCluster;byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SEMA3A	10371	hgsc.bcm.edu	36	7	83472649	83472649	+	Silent	SNP	A	A	G	rs7804122	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SAMD9L	219285	hgsc.bcm.edu	36	7	92600922	92600922	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PIK3CG	5294	hgsc.bcm.edu	36	7	106296774	106296774	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PNPLA8	50640	hgsc.bcm.edu	36	7	107942294	107942294	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PPP1R3A	5506	hgsc.bcm.edu	36	7	113305798	113305798	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PPP1R3A	5506	hgsc.bcm.edu	36	7	113306643	113306643	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GRM8	2918	hgsc.bcm.edu	36	7	126533856	126533856	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FLNC	2318	hgsc.bcm.edu	36	7	128278555	128278555	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CPA5	93979	hgsc.bcm.edu	36	7	129777071	129777071	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NUP205	23165	hgsc.bcm.edu	36	7	134929855	134929855	+	Silent	SNP	A	A	C	rs7800214	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TBXAS1	6916	hgsc.bcm.edu	36	7	139257510	139257510	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
WEE2	494551	hgsc.bcm.edu	36	7	141069518	141069518	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
EZH2	2146	hgsc.bcm.edu	36	7	148156770	148156770	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GIMAP2	26157	hgsc.bcm.edu	36	7	150020610	150020610	+	Silent	SNP	G	G	C	rs6952002	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TMEM176B	28959	hgsc.bcm.edu	36	7	150122017	150122017	+	Missense_Mutation	SNP	T	T	G	rs3173833	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MLL3	58508	hgsc.bcm.edu	36	7	151490503	151490503	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ANGPT4	51378	hgsc.bcm.edu	36	20	802940	802940	+	Silent	SNP	T	T	C	rs944110	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SIRPD	128646	hgsc.bcm.edu	36	20	1480438	1480438	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TMC2	117532	hgsc.bcm.edu	36	20	2490545	2490545	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATRN	8455	hgsc.bcm.edu	36	20	3526566	3526566	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PANK2	80025	hgsc.bcm.edu	36	20	3851938	3851938	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C20orf103	24141	hgsc.bcm.edu	36	20	9444716	9444716	+	Missense_Mutation	SNP	C	C	G	rs2232264	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SEL1L2	80343	hgsc.bcm.edu	36	20	13860309	13860309	+	Missense_Mutation	SNP	G	G	A	rs41275404	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RBL1	5933	hgsc.bcm.edu	36	20	35105969	35105969	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TTI1	0	hgsc.bcm.edu	36	20	36075020	36075020	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SLC2A10	81031	hgsc.bcm.edu	36	20	44787969	44787969	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ARFGEF2	10564	hgsc.bcm.edu	36	20	47038455	47038455	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF217	7764	hgsc.bcm.edu	36	20	51632422	51632422	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
AURKA	6790	hgsc.bcm.edu	36	20	54391551	54391551	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF831	128611	hgsc.bcm.edu	36	20	57202735	57202735	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OGFR	11054	hgsc.bcm.edu	36	20	60915138	60915138	+	Missense_Mutation	SNP	G	G	A	rs35813009	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OGFR	11054	hgsc.bcm.edu	36	20	60915142	60915142	+	Missense_Mutation	SNP	G	G	C	rs6122315	by2Hit2Allele;byCluster	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LIME1	54923	hgsc.bcm.edu	36	20	61839688	61839688	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CHEK2	11200	hgsc.bcm.edu	36	22	27421842	27421842	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RFPL1	5988	hgsc.bcm.edu	36	22	28167537	28167537	+	Missense_Mutation	SNP	T	T	C	rs3804076	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NF2	4771	hgsc.bcm.edu	36	22	28365099	28365099	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SMTN	6525	hgsc.bcm.edu	36	22	29822768	29822768	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZC3H7B	23264	hgsc.bcm.edu	36	22	40051799	40051799	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OR10G3	26533	hgsc.bcm.edu	36	14	21108499	21108499	+	Missense_Mutation	SNP	T	T	C	rs17792778	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ARHGAP5	394	hgsc.bcm.edu	36	14	31631047	31631047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
AKAP6	9472	hgsc.bcm.edu	36	14	32363307	32363307	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DAAM1	23002	hgsc.bcm.edu	36	14	58889004	58889004	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZFYVE26	23503	hgsc.bcm.edu	36	14	67319562	67319562	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DLST	1743	hgsc.bcm.edu	36	14	74429423	74429423	+	Silent	SNP	G	G	A	rs4140930	byCluster;byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATG2B	55102	hgsc.bcm.edu	36	14	95858807	95858807	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PIAS4	51588	hgsc.bcm.edu	36	19	3979783	3979783	+	Silent	SNP	C	C	T	rs2289863	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FSD1	79187	hgsc.bcm.edu	36	19	4274176	4274176	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SAFB	6294	hgsc.bcm.edu	36	19	5604365	5604365	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MYO1F	4542	hgsc.bcm.edu	36	19	8522671	8522671	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
AP1M2	10053	hgsc.bcm.edu	36	19	10553000	10553000	+	Silent	SNP	T	T	C	rs1045361	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RASAL3	64926	hgsc.bcm.edu	36	19	15427926	15427926	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
JAK3	3718	hgsc.bcm.edu	36	19	17808960	17808960	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ELL	8178	hgsc.bcm.edu	36	19	18437341	18437341	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZFP82	284406	hgsc.bcm.edu	36	19	41576240	41576240	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF573	126231	hgsc.bcm.edu	36	19	42921664	42921664	+	Missense_Mutation	SNP	T	T	C	rs3095726	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
WDR87	83889	hgsc.bcm.edu	36	19	43070330	43070330	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CYP2A7	1549	hgsc.bcm.edu	36	19	46074993	46074993	+	Missense_Mutation	SNP	A	A	G	rs2261144	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PSG6	5675	hgsc.bcm.edu	36	19	48106699	48106699	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LIG1	26018	hgsc.bcm.edu	36	19	53348952	53348952	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KLK3	3818	hgsc.bcm.edu	36	19	56051315	56051315	+	Silent	SNP	A	A	G	rs1135766	byCluster	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CEACAM18	729767	hgsc.bcm.edu	36	19	56678359	56678359	+	Missense_Mutation	SNP	A	A	G	rs10426247	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF615	284370	hgsc.bcm.edu	36	19	57187993	57187993	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF28	7576	hgsc.bcm.edu	36	19	57996402	57996402	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NLRP9	338321	hgsc.bcm.edu	36	19	60941484	60941484	+	Silent	SNP	A	A	G	rs56211941	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF547	284306	hgsc.bcm.edu	36	19	62580982	62580982	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DLGAP2	9228	hgsc.bcm.edu	36	8	1613944	1613944	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CSMD1	64478	hgsc.bcm.edu	36	8	3188284	3188284	+	Missense_Mutation	SNP	C	C	T	rs2161752	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CSMD1	64478	hgsc.bcm.edu	36	8	3241175	3241175	+	Missense_Mutation	SNP	C	C	T	rs3802303	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CSMD1	64478	hgsc.bcm.edu	36	8	3553344	3553344	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RP1L1	94137	hgsc.bcm.edu	36	8	10505582	10505582	+	Missense_Mutation	SNP	G	G	A	rs4840502	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PRKDC	5591	hgsc.bcm.edu	36	8	48956613	48956613	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ARFGEF1	10565	hgsc.bcm.edu	36	8	68341919	68341919	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PDP1	54704	hgsc.bcm.edu	36	8	95003760	95003760	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CDH17	1015	hgsc.bcm.edu	36	8	95241474	95241474	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RIMS2	9699	hgsc.bcm.edu	36	8	105094891	105094891	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
EIF3E	3646	hgsc.bcm.edu	36	8	109309779	109309779	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PKHD1L1	93035	hgsc.bcm.edu	36	8	110525225	110525225	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CSMD3	114788	hgsc.bcm.edu	36	8	114360064	114360064	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
COL14A1	7373	hgsc.bcm.edu	36	8	121285206	121285206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KIAA0196	9897	hgsc.bcm.edu	36	8	126128653	126128653	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ADCY8	114	hgsc.bcm.edu	36	8	131861995	131861995	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ADCY8	114	hgsc.bcm.edu	36	8	131865173	131865173	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF251	90987	hgsc.bcm.edu	36	8	145918708	145918708	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CAMTA1	23261	hgsc.bcm.edu	36	1	7646015	7646015	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SLC2A5	6518	hgsc.bcm.edu	36	1	9021495	9021495	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PADI4	23569	hgsc.bcm.edu	36	1	17553730	17553730	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
VWA5B1	127731	hgsc.bcm.edu	36	1	20544548	20544548	+	Missense_Mutation	SNP	G	G	A	rs11582960	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
HSPG2	3339	hgsc.bcm.edu	36	1	22077666	22077666	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
EIF2C1	26523	hgsc.bcm.edu	36	1	36140455	36140455	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
AGBL4	84871	hgsc.bcm.edu	36	1	48872772	48872772	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
BTF3L4	91408	hgsc.bcm.edu	36	1	52303158	52303158	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DNAJC6	9829	hgsc.bcm.edu	36	1	65637085	65637085	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C1orf173	127254	hgsc.bcm.edu	36	1	74810868	74810868	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SLC44A5	204962	hgsc.bcm.edu	36	1	75480298	75480298	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LPHN2	23266	hgsc.bcm.edu	36	1	82075296	82075296	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GBP3	51062	hgsc.bcm.edu	36	1	89251536	89251536	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GFI1	2672	hgsc.bcm.edu	36	1	92716736	92716736	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GCLM	2730	hgsc.bcm.edu	36	1	94134881	94134881	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GSTM5	2949	hgsc.bcm.edu	36	1	110059354	110059354	+	Missense_Mutation	SNP	T	T	C	rs2227963	byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CD53	963	hgsc.bcm.edu	36	1	111242005	111242005	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C1orf162	128346	hgsc.bcm.edu	36	1	111822162	111822162	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PHTF1	10745	hgsc.bcm.edu	36	1	114050766	114050766	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
HORMAD1	84072	hgsc.bcm.edu	36	1	148945692	148945692	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TDRKH	11022	hgsc.bcm.edu	36	1	150017970	150017970	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SEMA4A	64218	hgsc.bcm.edu	36	1	154392849	154392849	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FCRL1	115350	hgsc.bcm.edu	36	1	156038510	156038510	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PEX19	5824	hgsc.bcm.edu	36	1	158516557	158516557	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATF6	22926	hgsc.bcm.edu	36	1	160194951	160194951	+	Silent	SNP	A	A	G	rs9482	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MAEL	84944	hgsc.bcm.edu	36	1	165257702	165257702	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C1orf129	80133	hgsc.bcm.edu	36	1	169299934	169299934	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SEC16B	89866	hgsc.bcm.edu	36	1	176183692	176183692	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CFHR2	3080	hgsc.bcm.edu	36	1	195185355	195185355	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PPP1R15B	84919	hgsc.bcm.edu	36	1	202646966	202646966	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C1orf65	164127	hgsc.bcm.edu	36	1	221633523	221633523	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LYST	1130	hgsc.bcm.edu	36	1	233916968	233916968	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LYST	1130	hgsc.bcm.edu	36	1	233950658	233950658	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RYR2	6262	hgsc.bcm.edu	36	1	235726495	235726495	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RYR2	6262	hgsc.bcm.edu	36	1	235869022	235869022	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OR1C1	26188	hgsc.bcm.edu	36	1	245987984	245987984	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OR51F1	256892	hgsc.bcm.edu	36	11	4747056	4747056	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MRGPRX1	259249	hgsc.bcm.edu	36	11	18912017	18912017	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OR4S1	256148	hgsc.bcm.edu	36	11	48285217	48285217	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OR4A16	81327	hgsc.bcm.edu	36	11	54867820	54867820	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OR4C15	81309	hgsc.bcm.edu	36	11	55079253	55079253	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OR8U1	219417	hgsc.bcm.edu	36	11	55900386	55900386	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OR5M3	219482	hgsc.bcm.edu	36	11	55994078	55994078	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SMTNL1	219537	hgsc.bcm.edu	36	11	57074136	57074136	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GANAB	23193	hgsc.bcm.edu	36	11	62155159	62155159	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CATSPER1	117144	hgsc.bcm.edu	36	11	65544915	65544915	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SPCS2	9789	hgsc.bcm.edu	36	11	74354576	74354576	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TMEM126A	84233	hgsc.bcm.edu	36	11	85042846	85042846	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TRPC6	7225	hgsc.bcm.edu	36	11	100880100	100880100	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CASP5	838	hgsc.bcm.edu	36	11	104378116	104378116	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATM	472	hgsc.bcm.edu	36	11	107627839	107627839	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATM	472	hgsc.bcm.edu	36	11	107677624	107677624	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C11orf65	160140	hgsc.bcm.edu	36	11	107807758	107807758	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RNF214	257160	hgsc.bcm.edu	36	11	116620372	116620372	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CD3D	915	hgsc.bcm.edu	36	11	117716413	117716413	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CBL	867	hgsc.bcm.edu	36	11	118654131	118654131	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ROBO4	54538	hgsc.bcm.edu	36	11	124266537	124266537	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ADAMTS15	170689	hgsc.bcm.edu	36	11	129848705	129848705	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OPCML	4978	hgsc.bcm.edu	36	11	131812380	131812380	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
HIST1H1A	3024	hgsc.bcm.edu	36	6	26125737	26125737	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZFP57	346171	hgsc.bcm.edu	36	6	29748981	29748981	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NOTCH4	4855	hgsc.bcm.edu	36	6	32280086	32280086	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PEX6	5190	hgsc.bcm.edu	36	6	43040178	43040178	+	Missense_Mutation	SNP	G	G	T	rs1129187	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PEX6	5190	hgsc.bcm.edu	36	6	43040180	43040180	+	Silent	SNP	C	C	T	rs1129186	byCluster;byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PKHD1	5314	hgsc.bcm.edu	36	6	52038790	52038790	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TINAG	27283	hgsc.bcm.edu	36	6	54299590	54299590	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MAP3K7	6885	hgsc.bcm.edu	36	6	91314572	91314572	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
WASF1	8936	hgsc.bcm.edu	36	6	110529962	110529962	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KPNA5	3841	hgsc.bcm.edu	36	6	117152188	117152188	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FUCA2	2519	hgsc.bcm.edu	36	6	143866797	143866797	+	Missense_Mutation	SNP	G	G	T	rs11155297	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SYNE1	23345	hgsc.bcm.edu	36	6	152706954	152706954	+	Missense_Mutation	SNP	C	C	A	rs4645434	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SERPINF1	5176	hgsc.bcm.edu	36	17	1620026	1620026	+	Missense_Mutation	SNP	C	C	T	rs1136287	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ALOX15B	247	hgsc.bcm.edu	36	17	7891033	7891033	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MYH2	4620	hgsc.bcm.edu	36	17	10368639	10368639	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GAS2L2	246176	hgsc.bcm.edu	36	17	31098181	31098181	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZPBP2	124626	hgsc.bcm.edu	36	17	35285200	35285200	+	Silent	SNP	C	C	T	rs10852935	by2Hit2Allele;byCluster	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KRT39	390792	hgsc.bcm.edu	36	17	36368488	36368488	+	Missense_Mutation	SNP	C	C	T	rs7213256	by2Hit2Allele;byCluster;byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KRT32	3882	hgsc.bcm.edu	36	17	36872745	36872745	+	Silent	SNP	G	G	A	rs2857257	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KLHL10	317719	hgsc.bcm.edu	36	17	37251792	37251792	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KLHL11	55175	hgsc.bcm.edu	36	17	37263654	37263654	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DHX8	1659	hgsc.bcm.edu	36	17	38937638	38937638	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NGFR	4804	hgsc.bcm.edu	36	17	44942999	44942999	+	Silent	SNP	C	C	T	rs11466155	byCluster;byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TUBD1	51174	hgsc.bcm.edu	36	17	55292558	55292558	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ABCA9	10350	hgsc.bcm.edu	36	17	64500812	64500812	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ABCA9	10350	hgsc.bcm.edu	36	17	64551267	64551267	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
QRICH2	84074	hgsc.bcm.edu	36	17	71799189	71799189	+	Missense_Mutation	SNP	G	G	A	rs2279054	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MFSD11	79157	hgsc.bcm.edu	36	17	72277480	72277480	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RNF213	57674	hgsc.bcm.edu	36	17	75933731	75933731	+	Missense_Mutation	SNP	G	G	A	rs9674961	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KRTAP27-1	643812	hgsc.bcm.edu	36	21	30631309	30631309	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PKD1	5310	hgsc.bcm.edu	36	16	2100504	2100504	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SLX4	0	hgsc.bcm.edu	36	16	3579110	3579110	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GRIN2A	2903	hgsc.bcm.edu	36	16	9765286	9765286	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DNAH3	55567	hgsc.bcm.edu	36	16	20988396	20988396	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CDH8	1006	hgsc.bcm.edu	36	16	60412408	60412408	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GABARAPL2	11345	hgsc.bcm.edu	36	16	74168752	74168752	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ADAT1	23536	hgsc.bcm.edu	36	16	74208644	74208644	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF276	92822	hgsc.bcm.edu	36	16	88317399	88317399	+	Missense_Mutation	SNP	T	T	C	rs6500437	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ELP2	55250	hgsc.bcm.edu	36	18	31979929	31979929	+	Missense_Mutation	SNP	G	G	A	rs1785928	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ELP2	55250	hgsc.bcm.edu	36	18	32004044	32004044	+	Silent	SNP	C	C	T	rs8299	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DCC	1630	hgsc.bcm.edu	36	18	49085997	49085997	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ALPK2	115701	hgsc.bcm.edu	36	18	54347431	54347431	+	Silent	SNP	C	C	T	rs7236563	by2Hit2Allele;byCluster;byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ALPK2	115701	hgsc.bcm.edu	36	18	54355573	54355573	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GALR1	2587	hgsc.bcm.edu	36	18	73091633	73091633	+	Silent	SNP	T	T	C	rs5374	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
VHL	7428	hgsc.bcm.edu	36	3	10163219	10163219	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GORASP1	64689	hgsc.bcm.edu	36	3	39119294	39119294	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GORASP1	64689	hgsc.bcm.edu	36	3	39119295	39119295	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CX3CR1	1524	hgsc.bcm.edu	36	3	39282166	39282166	+	Missense_Mutation	SNP	G	G	A	rs3732378	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CTNNB1	1499	hgsc.bcm.edu	36	3	41241125	41241125	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KIF15	56992	hgsc.bcm.edu	36	3	44819328	44819328	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RTP3	83597	hgsc.bcm.edu	36	3	46514654	46514654	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
USP4	7375	hgsc.bcm.edu	36	3	49312915	49312915	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TRAIP	10293	hgsc.bcm.edu	36	3	49842089	49842089	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PDZRN3	23024	hgsc.bcm.edu	36	3	73515719	73515719	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CHMP2B	25978	hgsc.bcm.edu	36	3	87377617	87377617	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GABRR3	200959	hgsc.bcm.edu	36	3	99209437	99209437	+	Missense_Mutation	SNP	T	T	A	rs832032	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MYH15	22989	hgsc.bcm.edu	36	3	109639114	109639114	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GRAMD1C	54762	hgsc.bcm.edu	36	3	115117260	115117260	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DNAJC13	23317	hgsc.bcm.edu	36	3	133655011	133655011	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MRPS22	56945	hgsc.bcm.edu	36	3	140548473	140548473	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TNFSF10	8743	hgsc.bcm.edu	36	3	173707129	173707129	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ECT2	1894	hgsc.bcm.edu	36	3	174016184	174016184	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PIK3CA	5290	hgsc.bcm.edu	36	3	180411036	180411036	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MCCC1	56922	hgsc.bcm.edu	36	3	184222993	184222993	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
YEATS2	55689	hgsc.bcm.edu	36	3	184924915	184924915	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FAM131A	131408	hgsc.bcm.edu	36	3	185543287	185543287	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RFC4	5984	hgsc.bcm.edu	36	3	187992211	187992211	+	Silent	SNP	G	G	A	rs187868	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TNK2	10188	hgsc.bcm.edu	36	3	197099733	197099733	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
AKAP3	10566	hgsc.bcm.edu	36	12	4607303	4607303	+	Silent	SNP	G	G	A	rs7972737	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KCNA1	3736	hgsc.bcm.edu	36	12	4891489	4891489	+	Silent	SNP	T	T	C	rs1048500	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ING4	51147	hgsc.bcm.edu	36	12	6632446	6632446	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CLEC2B	51266	hgsc.bcm.edu	36	12	9901460	9901460	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
STYK1	55359	hgsc.bcm.edu	36	12	10666524	10666524	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TAS2R43	259289	hgsc.bcm.edu	36	12	11135433	11135433	+	Silent	SNP	G	G	C	rs35720106	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TAS2R43	259289	hgsc.bcm.edu	36	12	11135461	11135461	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TAS2R43	259289	hgsc.bcm.edu	36	12	11135992	11135992	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ART4	420	hgsc.bcm.edu	36	12	14884706	14884706	+	Missense_Mutation	SNP	C	C	T	rs11276	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KRAS	3845	hgsc.bcm.edu	36	12	25271540	25271540	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KRAS	3845	hgsc.bcm.edu	36	12	25289548	25289548	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ABCD2	225	hgsc.bcm.edu	36	12	38298886	38298886	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DIP2B	57609	hgsc.bcm.edu	36	12	49378405	49378405	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MBD6	114785	hgsc.bcm.edu	36	12	56207996	56207996	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MDM2	4193	hgsc.bcm.edu	36	12	67516738	67516738	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TRHDE	29953	hgsc.bcm.edu	36	12	71301247	71301247	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CSRP2	1466	hgsc.bcm.edu	36	12	75776875	75776875	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PPP1R12A	4659	hgsc.bcm.edu	36	12	78852770	78852770	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
BTBD11	121551	hgsc.bcm.edu	36	12	106535018	106535018	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ACACB	32	hgsc.bcm.edu	36	12	108107899	108107899	+	Missense_Mutation	SNP	G	G	A	rs2300455	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATP2A2	488	hgsc.bcm.edu	36	12	109256260	109256260	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PTPN11	5781	hgsc.bcm.edu	36	12	111411282	111411282	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TBX5	6910	hgsc.bcm.edu	36	12	113320839	113320839	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATP6V0A2	23545	hgsc.bcm.edu	36	12	122799084	122799084	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ZNF605	90462	hgsc.bcm.edu	36	12	132019805	132019805	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PLCB2	5330	hgsc.bcm.edu	36	15	38370148	38370148	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TMEM62	80021	hgsc.bcm.edu	36	15	41228539	41228539	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SEMA6D	80031	hgsc.bcm.edu	36	15	45845475	45845475	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CGNL1	84952	hgsc.bcm.edu	36	15	55533242	55533242	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FURIN	5045	hgsc.bcm.edu	36	15	89225248	89225248	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PRKX	5613	hgsc.bcm.edu	36	X	3602725	3602725	+	Silent	SNP	G	G	A	rs10871864	by2Hit2Allele;byCluster;byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CLCN4	1183	hgsc.bcm.edu	36	X	10115557	10115557	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MAP7D2	256714	hgsc.bcm.edu	36	X	19972541	19972541	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DDX53	168400	hgsc.bcm.edu	36	X	22928884	22928884	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MAGEB2	4113	hgsc.bcm.edu	36	X	30146686	30146686	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FAM47A	158724	hgsc.bcm.edu	36	X	34058269	34058269	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CXorf22	170063	hgsc.bcm.edu	36	X	35917460	35917460	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CCDC120	90060	hgsc.bcm.edu	36	X	48812334	48812334	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
WNK3	65267	hgsc.bcm.edu	36	X	54292722	54292722	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MAGED2	10916	hgsc.bcm.edu	36	X	54853125	54853125	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
AWAT1	158833	hgsc.bcm.edu	36	X	69376481	69376481	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TEX11	56159	hgsc.bcm.edu	36	X	69861904	69861904	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GUCY2F	2986	hgsc.bcm.edu	36	X	108605384	108605384	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
BCORL1	63035	hgsc.bcm.edu	36	X	128986903	128986903	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
F9	2158	hgsc.bcm.edu	36	X	138458262	138458262	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SLITRK2	84631	hgsc.bcm.edu	36	X	144711699	144711699	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PRRG3	79057	hgsc.bcm.edu	36	X	150619847	150619847	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PNMA3	29944	hgsc.bcm.edu	36	X	151976813	151976813	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PROM1	8842	hgsc.bcm.edu	36	4	15596713	15596713	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NCAPG	64151	hgsc.bcm.edu	36	4	17427983	17427983	+	Silent	SNP	T	T	C	rs2302212	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PI4K2B	55300	hgsc.bcm.edu	36	4	24865842	24865842	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RELL1	768211	hgsc.bcm.edu	36	4	37313004	37313004	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GNPDA2	132789	hgsc.bcm.edu	36	4	44413919	44413919	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KIT	3815	hgsc.bcm.edu	36	4	55288238	55288238	+	Silent	SNP	A	A	G	rs55986963	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KDR	3791	hgsc.bcm.edu	36	4	55657262	55657262	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
POLR2B	5431	hgsc.bcm.edu	36	4	57572001	57572001	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
AGXT2L1	64850	hgsc.bcm.edu	36	4	109888618	109888618	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PLK4	10733	hgsc.bcm.edu	36	4	129026669	129026669	+	Missense_Mutation	SNP	T	T	A	rs3811740	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OTUD4	54726	hgsc.bcm.edu	36	4	146278178	146278178	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FBXW7	55294	hgsc.bcm.edu	36	4	153468834	153468834	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SPOCK3	50859	hgsc.bcm.edu	36	4	167912418	167912418	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SNX25	83891	hgsc.bcm.edu	36	4	186500202	186500202	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TAF1B	9014	hgsc.bcm.edu	36	2	9962506	9962506	+	Missense_Mutation	SNP	G	G	A	rs16867223	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NBAS	51594	hgsc.bcm.edu	36	2	15247963	15247963	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
AGBL5	60509	hgsc.bcm.edu	36	2	27135678	27135678	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ALK	238	hgsc.bcm.edu	36	2	29373396	29373396	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RASGRP3	25780	hgsc.bcm.edu	36	2	33599125	33599125	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SULT6B1	391365	hgsc.bcm.edu	36	2	37252190	37252190	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATL2	64225	hgsc.bcm.edu	36	2	38391024	38391024	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RAB1A	5861	hgsc.bcm.edu	36	2	65171703	65171703	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PNO1	56902	hgsc.bcm.edu	36	2	68238601	68238601	+	Missense_Mutation	SNP	A	A	G	rs2044693	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CNRIP1	25927	hgsc.bcm.edu	36	2	68399878	68399878	+	Silent	SNP	T	T	C	rs4671898	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C2orf78	388960	hgsc.bcm.edu	36	2	73897464	73897464	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LYG2	254773	hgsc.bcm.edu	36	2	99226969	99226969	+	Missense_Mutation	SNP	T	T	C	rs34443578	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
STEAP3	55240	hgsc.bcm.edu	36	2	119737342	119737342	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CNTNAP5	129684	hgsc.bcm.edu	36	2	125246891	125246891	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LRP1B	53353	hgsc.bcm.edu	36	2	140832985	140832985	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
UBR3	130507	hgsc.bcm.edu	36	2	170512343	170512343	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PDE11A	50940	hgsc.bcm.edu	36	2	178644927	178644927	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TTN	7273	hgsc.bcm.edu	36	2	179149364	179149364	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TTN	7273	hgsc.bcm.edu	36	2	179367431	179367431	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FAM171B	165215	hgsc.bcm.edu	36	2	187335276	187335276	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FASTKD2	22868	hgsc.bcm.edu	36	2	207339927	207339927	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FASTKD2	22868	hgsc.bcm.edu	36	2	207339928	207339928	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ERBB4	2066	hgsc.bcm.edu	36	2	212275077	212275077	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SMARCAL1	50485	hgsc.bcm.edu	36	2	216993468	216993468	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TMEM198	130612	hgsc.bcm.edu	36	2	220122761	220122761	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NCL	4691	hgsc.bcm.edu	36	2	232028562	232028562	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ALPP	250	hgsc.bcm.edu	36	2	232953385	232953385	+	Silent	SNP	T	T	C	rs2260309	by2Hit2Allele;byCluster	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
COL6A3	1293	hgsc.bcm.edu	36	2	237939192	237939192	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TRAF3IP1	26146	hgsc.bcm.edu	36	2	238894111	238894111	+	Silent	SNP	C	C	A	rs13398676	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ANKMY1	51281	hgsc.bcm.edu	36	2	241112268	241112268	+	Missense_Mutation	SNP	T	T	C	rs35996697	byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATG4B	23192	hgsc.bcm.edu	36	2	242239184	242239184	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DENND4C	55667	hgsc.bcm.edu	36	9	19331045	19331045	+	Silent	SNP	A	A	G	rs928128	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
IFNA14	3448	hgsc.bcm.edu	36	9	21229385	21229385	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
UBQLN1	29979	hgsc.bcm.edu	36	9	85473998	85473998	+	Silent	SNP	C	C	A	rs1044175	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OMD	4958	hgsc.bcm.edu	36	9	94218966	94218966	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NR4A3	8013	hgsc.bcm.edu	36	9	101646810	101646810	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SVEP1	79987	hgsc.bcm.edu	36	9	112248071	112248071	+	Missense_Mutation	SNP	T	T	G	rs7863519	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ASTN2	23245	hgsc.bcm.edu	36	9	118622791	118622791	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TRAF1	7185	hgsc.bcm.edu	36	9	122711341	122711341	+	Silent	SNP	G	G	A	rs2239657	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LCN9	392399	hgsc.bcm.edu	36	9	137696935	137696935	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SLC34A3	142680	hgsc.bcm.edu	36	9	139250427	139250427	+	Missense_Mutation	SNP	A	A	T	rs28542318	byCluster;byFrequency	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SACS	26278	hgsc.bcm.edu	36	13	22807213	22807213	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FLT3	2322	hgsc.bcm.edu	36	13	27524716	27524716	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C13orf26	122046	hgsc.bcm.edu	36	13	30424879	30424879	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NBEA	26960	hgsc.bcm.edu	36	13	35118448	35118448	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FREM2	341640	hgsc.bcm.edu	36	13	38320658	38320658	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DGKH	160851	hgsc.bcm.edu	36	13	41691919	41691919	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KLF5	688	hgsc.bcm.edu	36	13	72534670	72534670	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LMO7	4008	hgsc.bcm.edu	36	13	75321249	75321249	+	Missense_Mutation	SNP	T	T	C	rs7986131	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KDELC1	79070	hgsc.bcm.edu	36	13	102239518	102239518	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ERCC5	2073	hgsc.bcm.edu	36	13	102308653	102308653	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PITRM1	10531	hgsc.bcm.edu	36	10	3197632	3197632	+	Missense_Mutation	SNP	A	A	G	rs3814596	byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
IL2RA	3559	hgsc.bcm.edu	36	10	6103504	6103504	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CELF2	0	hgsc.bcm.edu	36	10	11339741	11339741	+	Silent	SNP	A	A	T	rs2277212	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SUV39H2	79723	hgsc.bcm.edu	36	10	14984432	14984432	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MPP7	143098	hgsc.bcm.edu	36	10	28383109	28383109	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
EPC1	80314	hgsc.bcm.edu	36	10	32600731	32600731	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RBP3	5949	hgsc.bcm.edu	36	10	48009294	48009294	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MYPN	84665	hgsc.bcm.edu	36	10	69604265	69604265	+	Missense_Mutation	SNP	G	G	A	rs62620248	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
VCL	7414	hgsc.bcm.edu	36	10	75541741	75541741	+	Silent	SNP	C	C	G	rs2131956	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
OPN4	94233	hgsc.bcm.edu	36	10	88409708	88409708	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PTEN	5728	hgsc.bcm.edu	36	10	89682768	89682768	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PTEN	5728	hgsc.bcm.edu	36	10	89682833	89682833	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PTEN	5728	hgsc.bcm.edu	36	10	89682917	89682917	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MARCH5	54708	hgsc.bcm.edu	36	10	94099458	94099458	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RRP12	23223	hgsc.bcm.edu	36	10	99131474	99131474	+	Silent	SNP	C	C	T	rs12218483	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CUTC	51076	hgsc.bcm.edu	36	10	101492936	101492936	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DCLRE1A	9937	hgsc.bcm.edu	36	10	115595521	115595521	+	Missense_Mutation	SNP	T	T	C	rs35884667	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATRNL1	26033	hgsc.bcm.edu	36	10	116921032	116921032	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SEC23IP	11196	hgsc.bcm.edu	36	10	121648145	121648145	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GLRX3	10539	hgsc.bcm.edu	36	10	131849140	131849140	+	Missense_Mutation	SNP	C	C	T	rs2274217	byCluster;byFrequency;byHapMap;byOtherPop	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CDH18	1016	hgsc.bcm.edu	36	5	19874755	19874755	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PDZD2	23037	hgsc.bcm.edu	36	5	32124300	32124300	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TARS	6897	hgsc.bcm.edu	36	5	33481257	33481257	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DHX29	54505	hgsc.bcm.edu	36	5	54601041	54601041	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DDX4	54514	hgsc.bcm.edu	36	5	55091801	55091801	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PIK3R1	5295	hgsc.bcm.edu	36	5	67612576	67612576	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PIK3R1	5295	hgsc.bcm.edu	36	5	67626853	67626853	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
COL4A3BP	10087	hgsc.bcm.edu	36	5	74712710	74712710	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
APC	324	hgsc.bcm.edu	36	5	112144410	112144410	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
APC	324	hgsc.bcm.edu	36	5	112203181	112203181	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PCDHB3	56132	hgsc.bcm.edu	36	5	140461082	140461082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PCDH1	5097	hgsc.bcm.edu	36	5	141224970	141224970	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
RBM27	54439	hgsc.bcm.edu	36	5	145644453	145644453	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
JAKMIP2	9832	hgsc.bcm.edu	36	5	147031462	147031462	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
SPINK5	11005	hgsc.bcm.edu	36	5	147455660	147455660	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PDE1C	5137	hgsc.bcm.edu	36	7	31854237	31854237	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
CFH	3075	hgsc.bcm.edu	36	1	194887929	194887929	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
B3GNTL1	146712	hgsc.bcm.edu	36	17	78516913	78516913	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C3orf63	23272	hgsc.bcm.edu	36	3	56633712	56633712	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ATR	390502	hgsc.bcm.edu	36	3	143744291	143744291	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
STS	412	hgsc.bcm.edu	36	X	7253378	7253378	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
WWC3	55841	hgsc.bcm.edu	36	X	10044548	10044548	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
NXF3	56000	hgsc.bcm.edu	36	X	102220849	102220849	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TTN	7273	hgsc.bcm.edu	36	2	179195641	179195641	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ABCA12	26154	hgsc.bcm.edu	36	2	215622593	215622593	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
FMN2	56776	hgsc.bcm.edu	36	1	238437679	238437744	+	In_Frame_Del	DEL	CCCGGAGCGGGCATACCCCCTCCTCCCCCACTTCCCGGAGCGGGCATACCCCCTCCGCCCCCACTT	CCCGGAGCGGGCATACCCCCTCCTCCCCCACTTCCCGGAGCGGGCATACCCCCTCCGCCCCCACTT	-	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	CCCGGAGCGGGCATACCCCCTCCTCCCCCACTTCCCGGAGCGGGCATACCCCCTCCGCCCCCACTT	CCCGGAGCGGGCATACCCCCTCCTCCCCCACTTCCCGGAGCGGGCATACCCCCTCCGCCCCCACTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
GORASP1	64689	hgsc.bcm.edu	36	3	39119294	39119314	+	In_Frame_Del	DEL	GTCTTCATATTGAACACCTCC	GTCTTCATATTGAACACCTCC	-	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	GTCTTCATATTGAACACCTCC	GTCTTCATATTGAACACCTCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
COL6A5	256076	hgsc.bcm.edu	36	3	131599293	131599293	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MUC4	4585	hgsc.bcm.edu	36	3	196994839	196994886	+	In_Frame_Del	DEL	GTGACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGC	GTGACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGC	-	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	GTGACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGC	GTGACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MUC4	4585	hgsc.bcm.edu	36	3	196999762	196999809	+	In_Frame_Del	DEL	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	-	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
ADAMTS2	9509	hgsc.bcm.edu	36	5	178497536	178497537	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
C9orf174	0	hgsc.bcm.edu	36	9	99156694	99156694	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KRTAP5-1	387264	hgsc.bcm.edu	36	11	1562697	1562726	+	In_Frame_Del	DEL	CCACAGCCACCCTTGGATCCCCCACAAGAG	CCACAGCCACCCTTGGATCCCCCACAAGAG	-	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	CCACAGCCACCCTTGGATCCCCCACAAGAG	CCACAGCCACCCTTGGATCCCCCACAAGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DNAJC4	3338	hgsc.bcm.edu	36	11	63755948	63755949	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
WNK1	65125	hgsc.bcm.edu	36	12	733062	733063	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
LRRIQ1	84125	hgsc.bcm.edu	36	12	83974442	83974443	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
DDHD1	80821	hgsc.bcm.edu	36	14	52689230	52689231	+	In_Frame_Ins	INS	-	-	GCCGCC	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MSLNL	401827	hgsc.bcm.edu	36	16	770767	770768	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
MSLNL	401827	hgsc.bcm.edu	36	16	770768	770769	+	Frame_Shift_Ins	INS	-	-	CT	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
TP53	7157	hgsc.bcm.edu	36	17	7519199	7519200	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
PLAC4	191585	hgsc.bcm.edu	36	21	41473183	41473183	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
KRTAP10-6	386674	hgsc.bcm.edu	36	21	44836647	44836648	+	In_Frame_Ins	INS	-	-	GGGGCGCAGCAGCTG	novel	unknown	TCGA-AZ-6608-01A-11D-1835-10	TCGA-AZ-6608-11A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b39c35d2-e052-4156-9f9c-2ed6c6686090	36c523f5-3b74-48f8-8a25-960392420d07
