Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
DEFB116	245930	hgsc.bcm.edu	36	20	29354914	29354914	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
TFIP11	24144	hgsc.bcm.edu	36	22	25218249	25218249	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
TRIOBP	11078	hgsc.bcm.edu	36	22	36450076	36450076	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
SEPT3	55964	hgsc.bcm.edu	36	22	40718687	40718687	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MYO1F	4542	hgsc.bcm.edu	36	19	8522669	8522669	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MUC16	94025	hgsc.bcm.edu	36	19	8938661	8938661	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MLL4	9757	hgsc.bcm.edu	36	19	40905935	40905935	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PRODH2	58510	hgsc.bcm.edu	36	19	40982817	40982817	+	Missense_Mutation	SNP	C	C	T	rs3761097	byCluster;byFrequency;byHapMap	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
GSK3A	2931	hgsc.bcm.edu	36	19	47430401	47430401	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ZNF304	57343	hgsc.bcm.edu	36	19	62560663	62560663	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
CSMD3	114788	hgsc.bcm.edu	36	8	113368626	113368626	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
CDC7	8317	hgsc.bcm.edu	36	1	91746068	91746068	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
C1orf103	55791	hgsc.bcm.edu	36	1	111295735	111295735	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
REG4	83998	hgsc.bcm.edu	36	1	120143882	120143882	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ASH1L	55870	hgsc.bcm.edu	36	1	153757889	153757889	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
DUSP23	114971	hgsc.bcm.edu	36	1	158018656	158018656	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
CD55	1604	hgsc.bcm.edu	36	1	205562362	205562362	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
OBSCN	84033	hgsc.bcm.edu	36	1	226587221	226587221	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
TTC13	79573	hgsc.bcm.edu	36	1	229142906	229142906	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
TRIM58	25893	hgsc.bcm.edu	36	1	246105844	246105844	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
OR52E6	390078	hgsc.bcm.edu	36	11	5819150	5819150	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
LDHC	3948	hgsc.bcm.edu	36	11	18429141	18429141	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PSMC3	5702	hgsc.bcm.edu	36	11	47397063	47397063	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ATM	472	hgsc.bcm.edu	36	11	107627876	107627876	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ST14	6768	hgsc.bcm.edu	36	11	129565699	129565699	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ALDH5A1	7915	hgsc.bcm.edu	36	6	24623517	24623517	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
EPB41L2	2037	hgsc.bcm.edu	36	6	131232576	131232576	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MYH10	4628	hgsc.bcm.edu	36	17	8392762	8392762	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MYH10	4628	hgsc.bcm.edu	36	17	8392764	8392764	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
NF1	4763	hgsc.bcm.edu	36	17	26691735	26691735	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
TMEM132E	124842	hgsc.bcm.edu	36	17	29987186	29987186	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
NSF	4905	hgsc.bcm.edu	36	17	42184079	42184079	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PTTG1IP	754	hgsc.bcm.edu	36	21	45100668	45100668	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
SALL1	6299	hgsc.bcm.edu	36	16	49730709	49730709	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MYOM1	8736	hgsc.bcm.edu	36	18	3178882	3178882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ALPK2	115701	hgsc.bcm.edu	36	18	54353973	54353973	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
VHL	7428	hgsc.bcm.edu	36	3	10163240	10163240	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PIK3R4	30849	hgsc.bcm.edu	36	3	131887939	131887939	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ATR	390502	hgsc.bcm.edu	36	3	143663532	143663532	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PIK3CA	5290	hgsc.bcm.edu	36	3	180418786	180418786	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PIK3CA	5290	hgsc.bcm.edu	36	3	180434779	180434779	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ETV6	2120	hgsc.bcm.edu	36	12	11883449	11883449	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
LOH12CR1	118426	hgsc.bcm.edu	36	12	12405481	12405481	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
KIAA1467	57613	hgsc.bcm.edu	36	12	13110894	13110894	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
LRRK2	120892	hgsc.bcm.edu	36	12	39015068	39015068	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
FAM186B	84070	hgsc.bcm.edu	36	12	48281052	48281052	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
OR6C75	390323	hgsc.bcm.edu	36	12	54045826	54045826	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
TRHDE	29953	hgsc.bcm.edu	36	12	71179594	71179594	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
NTS	4922	hgsc.bcm.edu	36	12	84794586	84794586	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MYO1H	283446	hgsc.bcm.edu	36	12	108323356	108323356	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PTPN11	5781	hgsc.bcm.edu	36	12	111372587	111372587	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MAP1A	4130	hgsc.bcm.edu	36	15	41606684	41606684	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
IDH3A	3419	hgsc.bcm.edu	36	15	76242905	76242905	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
RASGRF1	5923	hgsc.bcm.edu	36	15	77060062	77060062	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
CHSY1	22856	hgsc.bcm.edu	36	15	99535996	99535996	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ATRX	546	hgsc.bcm.edu	36	X	76798727	76798727	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ADH1B	125	hgsc.bcm.edu	36	4	100448032	100448032	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ANK2	287	hgsc.bcm.edu	36	4	114498911	114498911	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MSH6	2956	hgsc.bcm.edu	36	2	47879569	47879569	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MSH6	2956	hgsc.bcm.edu	36	2	47885626	47885626	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
C2orf29	55571	hgsc.bcm.edu	36	2	101240820	101240820	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
GLI2	2736	hgsc.bcm.edu	36	2	121429396	121429396	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
BAZ2B	29994	hgsc.bcm.edu	36	2	159997726	159997726	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MRPL44	65080	hgsc.bcm.edu	36	2	224532521	224532521	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
TIGD1	200765	hgsc.bcm.edu	36	2	233122015	233122015	+	Silent	SNP	C	C	T	rs6752614	by2Hit2Allele;byCluster	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
HTR2A	3356	hgsc.bcm.edu	36	13	46367928	46367928	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MYO16	23026	hgsc.bcm.edu	36	13	108177845	108177845	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PITRM1	10531	hgsc.bcm.edu	36	10	3183508	3183508	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ASB13	79754	hgsc.bcm.edu	36	10	5723922	5723922	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PTEN	5728	hgsc.bcm.edu	36	10	89682837	89682837	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PTEN	5728	hgsc.bcm.edu	36	10	89715027	89715027	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
FAM178A	400506	hgsc.bcm.edu	36	10	102667038	102667038	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
PIK3R1	5295	hgsc.bcm.edu	36	5	67626853	67626853	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
CMYA5	202333	hgsc.bcm.edu	36	5	79062121	79062121	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
APC	324	hgsc.bcm.edu	36	5	112203273	112203273	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MGAT4B	11282	hgsc.bcm.edu	36	5	179160123	179160123	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
NF1	4763	hgsc.bcm.edu	36	17	26610175	26610175	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MYL1	4632	hgsc.bcm.edu	36	2	210888011	210888011	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
ATR	390502	hgsc.bcm.edu	36	3	143757430	143757430	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MUC4	4585	hgsc.bcm.edu	36	3	196990687	196990734	+	In_Frame_Del	DEL	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	-	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MUC4	4585	hgsc.bcm.edu	36	3	196993221	196993316	+	In_Frame_Del	DEL	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	-	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
MUC2	4583	hgsc.bcm.edu	36	11	1082802	1082802	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
SELPLG	6404	hgsc.bcm.edu	36	12	107541780	107541809	+	Frame_Shift_Del	DEL	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	-	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
KRTAP4-3	85290	hgsc.bcm.edu	36	17	36577755	36577756	+	In_Frame_Ins	INS	-	-	GCAGCAGGTGGTCAG	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
AXIN2	8313	hgsc.bcm.edu	36	17	60984436	60984437	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
SOX9	6662	hgsc.bcm.edu	36	17	67631830	67631831	+	Frame_Shift_Ins	INS	-	-	TG	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
SOX9	6662	hgsc.bcm.edu	36	17	67631832	67631834	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
UHRF1	29128	hgsc.bcm.edu	36	19	4905679	4905680	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
KRTAP10-7	386675	hgsc.bcm.edu	36	21	44845084	44845098	+	Frame_Shift_Del	DEL	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG	-	novel	unknown	TCGA-CA-5255-01A-11D-1835-10	TCGA-CA-5255-10A-01D-1835-10	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	ab3853d3-534b-439c-ad13-f4c3242ae5f3	fd470057-044e-4cbd-9b2d-2abb5dafbb87
