Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
DAGLB	221955	hgsc.bcm.edu	36	7	6432215	6432215	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TFPI2	7980	hgsc.bcm.edu	36	7	93356348	93356348	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ORAI2	80228	hgsc.bcm.edu	36	7	101866555	101866555	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PNPLA8	50640	hgsc.bcm.edu	36	7	107942453	107942453	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
BRAF	673	hgsc.bcm.edu	36	7	140099624	140099624	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GALNTL5	168391	hgsc.bcm.edu	36	7	151342712	151342712	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ARHGAP40	0	hgsc.bcm.edu	36	20	36689221	36689221	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FAM65C	140876	hgsc.bcm.edu	36	20	48658432	48658432	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NPEPL1	79716	hgsc.bcm.edu	36	20	56702293	56702293	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GNB1L	54584	hgsc.bcm.edu	36	22	18156384	18156384	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
THOC5	8563	hgsc.bcm.edu	36	22	28265350	28265350	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CSF2RB	1439	hgsc.bcm.edu	36	22	35655662	35655662	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MCHR1	2847	hgsc.bcm.edu	36	22	39407564	39407564	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SALL2	6297	hgsc.bcm.edu	36	14	21061570	21061570	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CDH24	64403	hgsc.bcm.edu	36	14	22587511	22587511	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
IL25	64806	hgsc.bcm.edu	36	14	22912372	22912372	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PPP2R3C	55012	hgsc.bcm.edu	36	14	34634083	34634083	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
C14orf166B	145497	hgsc.bcm.edu	36	14	76402094	76402094	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZNF555	148254	hgsc.bcm.edu	36	19	2804696	2804696	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
C3	718	hgsc.bcm.edu	36	19	6658823	6658823	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FBN3	84467	hgsc.bcm.edu	36	19	8097395	8097395	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
OR7D4	125958	hgsc.bcm.edu	36	19	9186272	9186272	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZNF136	7695	hgsc.bcm.edu	36	19	12157714	12157714	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FBXW9	84261	hgsc.bcm.edu	36	19	12661596	12661596	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RGS9BP	388531	hgsc.bcm.edu	36	19	37859098	37859098	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZNF585B	92285	hgsc.bcm.edu	36	19	42369891	42369891	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZFP30	22835	hgsc.bcm.edu	36	19	42817742	42817742	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RYR1	6261	hgsc.bcm.edu	36	19	43707852	43707852	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FCGBP	8857	hgsc.bcm.edu	36	19	45057882	45057882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZNF574	64763	hgsc.bcm.edu	36	19	47276639	47276639	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CGB1	114335	hgsc.bcm.edu	36	19	54231316	54231316	+	Silent	SNP	C	C	T	rs35133942	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HRC	3270	hgsc.bcm.edu	36	19	54349104	54349104	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NUP62	23636	hgsc.bcm.edu	36	19	55104042	55104042	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
LRRC4B	94030	hgsc.bcm.edu	36	19	55713589	55713589	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZNF418	147686	hgsc.bcm.edu	36	19	63130135	63130135	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NCOA2	10499	hgsc.bcm.edu	36	8	71213055	71213055	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZFHX4	79776	hgsc.bcm.edu	36	8	77938286	77938286	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
POP1	260434	hgsc.bcm.edu	36	8	99209879	99209879	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TMEM74	157753	hgsc.bcm.edu	36	8	109865646	109865646	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TMEM74	157753	hgsc.bcm.edu	36	8	109866350	109866350	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ATAD2	29028	hgsc.bcm.edu	36	8	124409656	124409656	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
UBE4B	10277	hgsc.bcm.edu	36	1	10089176	10089176	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ARID1A	8289	hgsc.bcm.edu	36	1	26973522	26973522	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CC2D1B	200014	hgsc.bcm.edu	36	1	52594697	52594697	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NEXN	91624	hgsc.bcm.edu	36	1	78155935	78155935	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SLC6A17	388662	hgsc.bcm.edu	36	1	110536778	110536778	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SPAG17	200162	hgsc.bcm.edu	36	1	118307999	118307999	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HRNR	388697	hgsc.bcm.edu	36	1	150459837	150459837	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
IVL	3713	hgsc.bcm.edu	36	1	151149603	151149603	+	Missense_Mutation	SNP	C	C	T	rs17855670	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MNDA	4332	hgsc.bcm.edu	36	1	157084155	157084155	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ATP1A2	477	hgsc.bcm.edu	36	1	158366995	158366995	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
METTL13	51603	hgsc.bcm.edu	36	1	170017815	170017815	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NFASC	23114	hgsc.bcm.edu	36	1	203233051	203233051	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CENPF	1063	hgsc.bcm.edu	36	1	212862095	212862095	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SPATA17	128153	hgsc.bcm.edu	36	1	216014446	216014446	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RAB4A	5867	hgsc.bcm.edu	36	1	227505310	227505310	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NID1	4811	hgsc.bcm.edu	36	1	234211617	234211617	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZP4	57829	hgsc.bcm.edu	36	1	236119849	236119849	+	Missense_Mutation	SNP	G	G	A	rs34370253	byCluster;byFrequency	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FH	3949	hgsc.bcm.edu	36	1	239730445	239730445	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MUC2	4583	hgsc.bcm.edu	36	11	1083498	1083498	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NELL1	4745	hgsc.bcm.edu	36	11	20925493	20925493	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
KCNK4	50801	hgsc.bcm.edu	36	11	63817228	63817228	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SHANK2	22941	hgsc.bcm.edu	36	11	70330842	70330842	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ERVFRDE1	0	hgsc.bcm.edu	36	6	11213309	11213309	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MAS1L	116511	hgsc.bcm.edu	36	6	29563532	29563532	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PRRC2A	0	hgsc.bcm.edu	36	6	31702842	31702842	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MDGA1	266727	hgsc.bcm.edu	36	6	37731617	37731617	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TFAP2D	83741	hgsc.bcm.edu	36	6	50826951	50826951	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FAM83B	222584	hgsc.bcm.edu	36	6	54914496	54914496	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DST	667	hgsc.bcm.edu	36	6	56589302	56589302	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SPACA1	81833	hgsc.bcm.edu	36	6	88820417	88820417	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CASP8AP2	9994	hgsc.bcm.edu	36	6	90634369	90634369	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SIM1	6492	hgsc.bcm.edu	36	6	100945524	100945524	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RTN4IP1	84816	hgsc.bcm.edu	36	6	107126593	107126593	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
KIAA1919	91749	hgsc.bcm.edu	36	6	111691771	111691771	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GJA1	2697	hgsc.bcm.edu	36	6	121809811	121809811	+	Missense_Mutation	SNP	C	C	T	rs2228971	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NHSL1	57224	hgsc.bcm.edu	36	6	138795857	138795857	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GRM1	2911	hgsc.bcm.edu	36	6	146762229	146762229	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
OR3A2	4995	hgsc.bcm.edu	36	17	3128488	3128488	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NLRP1	22861	hgsc.bcm.edu	36	17	5403598	5403598	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GAS7	8522	hgsc.bcm.edu	36	17	9770803	9770803	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SREBF1	6720	hgsc.bcm.edu	36	17	17663710	17663710	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NLK	51701	hgsc.bcm.edu	36	17	23512371	23512371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
C17orf42	79736	hgsc.bcm.edu	36	17	26250414	26250414	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DHX58	79132	hgsc.bcm.edu	36	17	37513175	37513175	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
BRCA1	672	hgsc.bcm.edu	36	17	38499781	38499781	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MBTD1	54799	hgsc.bcm.edu	36	17	46625165	46625165	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ADAMTS1	9510	hgsc.bcm.edu	36	21	27138945	27138945	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
LTN1	0	hgsc.bcm.edu	36	21	29246386	29246386	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SIK1	150094	hgsc.bcm.edu	36	21	43664267	43664267	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MSLN	10232	hgsc.bcm.edu	36	16	755716	755716	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SRL	6345	hgsc.bcm.edu	36	16	4187874	4187874	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CORO1A	11151	hgsc.bcm.edu	36	16	30104193	30104193	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PHKB	5257	hgsc.bcm.edu	36	16	46180501	46180501	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SLC9A5	6553	hgsc.bcm.edu	36	16	65847313	65847313	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HYDIN	54768	hgsc.bcm.edu	36	16	69728679	69728679	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MBTPS1	8720	hgsc.bcm.edu	36	16	82678492	82678492	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZNF469	84627	hgsc.bcm.edu	36	16	87027793	87027793	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CPNE7	27132	hgsc.bcm.edu	36	16	88190491	88190491	+	Silent	SNP	T	T	C	rs694285	byCluster;byFrequency;byHapMap	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
USP14	9097	hgsc.bcm.edu	36	18	188092	188092	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CTNNB1	1499	hgsc.bcm.edu	36	3	41241121	41241121	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZDHHC3	51304	hgsc.bcm.edu	36	3	44950396	44950396	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
OR5H6	79295	hgsc.bcm.edu	36	3	99465933	99465933	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GRAMD1C	54762	hgsc.bcm.edu	36	3	115117259	115117259	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SLC15A2	6565	hgsc.bcm.edu	36	3	123125890	123125890	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MYLK	4638	hgsc.bcm.edu	36	3	124935549	124935549	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ITGB5	3693	hgsc.bcm.edu	36	3	125998232	125998232	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DZIP1L	199221	hgsc.bcm.edu	36	3	139269751	139269751	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PLD1	5589	hgsc.bcm.edu	36	3	172805851	172805851	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PIK3CA	5290	hgsc.bcm.edu	36	3	180418785	180418785	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PIK3CA	5290	hgsc.bcm.edu	36	3	180418792	180418792	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ECE2	9718	hgsc.bcm.edu	36	3	185477041	185477041	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ATP13A5	344905	hgsc.bcm.edu	36	3	194490428	194490428	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
LRRK2	120892	hgsc.bcm.edu	36	12	39031748	39031748	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DYRK2	8445	hgsc.bcm.edu	36	12	66337947	66337947	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
STAB2	55576	hgsc.bcm.edu	36	12	102679210	102679210	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PTPN11	5781	hgsc.bcm.edu	36	12	111372555	111372555	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
P2RX7	5027	hgsc.bcm.edu	36	12	120083104	120083104	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RYR3	6263	hgsc.bcm.edu	36	15	31739760	31739760	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
UBR1	197131	hgsc.bcm.edu	36	15	41135898	41135898	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TMOD3	29766	hgsc.bcm.edu	36	15	49968621	49968621	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DENND4A	10260	hgsc.bcm.edu	36	15	63741266	63741266	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
UACA	55075	hgsc.bcm.edu	36	15	68747022	68747022	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CYP1A1	1543	hgsc.bcm.edu	36	15	72800615	72800615	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RASGRF1	5923	hgsc.bcm.edu	36	15	77114539	77114539	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TMED3	23423	hgsc.bcm.edu	36	15	77393307	77393307	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
C15orf42	90381	hgsc.bcm.edu	36	15	87968999	87968999	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SYNM	23336	hgsc.bcm.edu	36	15	97489029	97489029	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MXRA5	25878	hgsc.bcm.edu	36	X	3271724	3271724	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
WWC3	55841	hgsc.bcm.edu	36	X	10054286	10054286	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZNF41	7592	hgsc.bcm.edu	36	X	47193734	47193734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ITIH5L	347365	hgsc.bcm.edu	36	X	54800732	54800732	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
EDA	1896	hgsc.bcm.edu	36	X	68753063	68753063	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RAB41	347517	hgsc.bcm.edu	36	X	69420122	69420122	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PLP1	5354	hgsc.bcm.edu	36	X	102928268	102928268	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SLC25A5	292	hgsc.bcm.edu	36	X	118488401	118488401	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GLUD2	2747	hgsc.bcm.edu	36	X	120009706	120009706	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ODZ1	10178	hgsc.bcm.edu	36	X	123353768	123353768	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
F9	2158	hgsc.bcm.edu	36	X	138440596	138440596	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HCFC1	3054	hgsc.bcm.edu	36	X	152872828	152872828	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
KLB	152831	hgsc.bcm.edu	36	4	39112328	39112328	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
N4BP2	55728	hgsc.bcm.edu	36	4	39815003	39815003	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
EPHA5	2044	hgsc.bcm.edu	36	4	65925339	65925339	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CCNI	10983	hgsc.bcm.edu	36	4	78195419	78195419	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HPSE	10855	hgsc.bcm.edu	36	4	84450939	84450939	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MEPE	56955	hgsc.bcm.edu	36	4	88985473	88985473	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MAML3	55534	hgsc.bcm.edu	36	4	141030543	141030543	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MAML3	55534	hgsc.bcm.edu	36	4	141030564	141030564	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FBXW7	55294	hgsc.bcm.edu	36	4	153463541	153463541	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NEK1	4750	hgsc.bcm.edu	36	4	170558340	170558340	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SPATA4	132851	hgsc.bcm.edu	36	4	177346264	177346264	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
IRF2	3660	hgsc.bcm.edu	36	4	185577632	185577632	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NBAS	51594	hgsc.bcm.edu	36	2	15247963	15247963	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SPTBN1	6711	hgsc.bcm.edu	36	2	54723703	54723703	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FAM161A	84140	hgsc.bcm.edu	36	2	61920629	61920629	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
C2orf86	51057	hgsc.bcm.edu	36	2	63202656	63202656	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MFSD9	84804	hgsc.bcm.edu	36	2	102715214	102715214	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZC3H6	376940	hgsc.bcm.edu	36	2	112806179	112806179	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TUBA3E	112714	hgsc.bcm.edu	36	2	130670412	130670412	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NEB	4703	hgsc.bcm.edu	36	2	152102723	152102723	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SLC4A10	57282	hgsc.bcm.edu	36	2	162521982	162521982	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZAK	51776	hgsc.bcm.edu	36	2	173742798	173742798	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SP9	100131390	hgsc.bcm.edu	36	2	174910404	174910404	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HOXD3	3232	hgsc.bcm.edu	36	2	176745125	176745125	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TTN	7273	hgsc.bcm.edu	36	2	179219000	179219000	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
BMPR2	659	hgsc.bcm.edu	36	2	203040564	203040564	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PIKFYVE	200576	hgsc.bcm.edu	36	2	208898251	208898251	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FBXO36	130888	hgsc.bcm.edu	36	2	230583768	230583768	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
COL6A3	1293	hgsc.bcm.edu	36	2	237950416	237950416	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
JAK2	3717	hgsc.bcm.edu	36	9	5040790	5040790	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
JAK2	3717	hgsc.bcm.edu	36	9	5062551	5062551	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
BNC2	54796	hgsc.bcm.edu	36	9	16427046	16427046	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MOBKL2B	79817	hgsc.bcm.edu	36	9	27445164	27445164	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NUDT2	318	hgsc.bcm.edu	36	9	34333315	34333315	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
OR13J1	392309	hgsc.bcm.edu	36	9	35860162	35860162	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TRPM6	140803	hgsc.bcm.edu	36	9	76590719	76590719	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FANCC	2176	hgsc.bcm.edu	36	9	97051283	97051283	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ALDOB	229	hgsc.bcm.edu	36	9	103231886	103231886	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
OR1J2	26740	hgsc.bcm.edu	36	9	124313082	124313082	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
OR1L1	26737	hgsc.bcm.edu	36	9	124463985	124463985	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ASS1	445	hgsc.bcm.edu	36	9	132323756	132323756	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NBEA	26960	hgsc.bcm.edu	36	13	34528261	34528261	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CCNA1	8900	hgsc.bcm.edu	36	13	35909975	35909975	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SLITRK6	84189	hgsc.bcm.edu	36	13	85268360	85268360	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ARHGAP21	57584	hgsc.bcm.edu	36	10	24949170	24949170	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZEB1	6935	hgsc.bcm.edu	36	10	31849191	31849191	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
LRRC18	474354	hgsc.bcm.edu	36	10	49792115	49792115	+	Missense_Mutation	SNP	C	C	T	rs17772611	byCluster;byFrequency;byHapMap	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PRF1	55893	hgsc.bcm.edu	36	10	72030302	72030302	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PTEN	5728	hgsc.bcm.edu	36	10	89707667	89707667	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PTEN	5728	hgsc.bcm.edu	36	10	89710749	89710749	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
JAKMIP3	282973	hgsc.bcm.edu	36	10	133781048	133781048	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CDH10	1008	hgsc.bcm.edu	36	5	24541101	24541101	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ADAMTS12	81792	hgsc.bcm.edu	36	5	33719784	33719784	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DHX29	54505	hgsc.bcm.edu	36	5	54615166	54615166	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DEPDC1B	55789	hgsc.bcm.edu	36	5	59930790	59930790	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
IQGAP2	10788	hgsc.bcm.edu	36	5	75922074	75922074	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
LNPEP	4012	hgsc.bcm.edu	36	5	96357919	96357919	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
APC	324	hgsc.bcm.edu	36	5	112203620	112203620	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
APC	324	hgsc.bcm.edu	36	5	112204716	112204716	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CEP120	153241	hgsc.bcm.edu	36	5	122713539	122713539	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PCDHB3	56132	hgsc.bcm.edu	36	5	140461746	140461746	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FAT2	2196	hgsc.bcm.edu	36	5	150902699	150902699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ADAM19	8728	hgsc.bcm.edu	36	5	156865350	156865350	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HRH2	3274	hgsc.bcm.edu	36	5	175043242	175043242	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
KPNB1	3837	hgsc.bcm.edu	36	17	43089426	43089426	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RIOK3	8780	hgsc.bcm.edu	36	18	19297042	19297042	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ABCC4	10257	hgsc.bcm.edu	36	13	94613376	94613376	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ARID1A	8289	hgsc.bcm.edu	36	1	26973522	26973526	+	Frame_Shift_Del	DEL	CCCCA	CCCCA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CCCCA	CCCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SERBP1	26135	hgsc.bcm.edu	36	1	67663247	67663250	+	In_Frame_Del	DEL	AACT	AACT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AACT	AACT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZBTB7B	51043	hgsc.bcm.edu	36	1	153254589	153254591	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GPR52	9293	hgsc.bcm.edu	36	1	172684863	172684866	+	Frame_Shift_Del	DEL	CTGT	CTGT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTGT	CTGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CEP350	9857	hgsc.bcm.edu	36	1	178250052	178250054	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ITSN2	50618	hgsc.bcm.edu	36	2	24284629	24284631	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SPTBN1	6711	hgsc.bcm.edu	36	2	54696916	54696918	+	In_Frame_Del	DEL	GTG	GTG	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GTG	GTG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ACVR2A	92	hgsc.bcm.edu	36	2	148373511	148373511	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ACVR2A	92	hgsc.bcm.edu	36	2	148400156	148400156	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SP3	6670	hgsc.bcm.edu	36	2	174528789	174528793	+	Frame_Shift_Del	DEL	GACCA	GACCA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GACCA	GACCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SLC4A7	9497	hgsc.bcm.edu	36	3	27447980	27447982	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PTPN23	25930	hgsc.bcm.edu	36	3	47425938	47425939	+	Frame_Shift_Del	DEL	TA	TA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TA	TA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
COL7A1	1294	hgsc.bcm.edu	36	3	48605630	48605632	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RBM5	10181	hgsc.bcm.edu	36	3	50118017	50118018	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SR140	23350	hgsc.bcm.edu	36	3	144203189	144203191	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MUC4	4585	hgsc.bcm.edu	36	3	196990687	196990734	+	In_Frame_Del	DEL	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MUC4	4585	hgsc.bcm.edu	36	3	196999393	196999440	+	In_Frame_Del	DEL	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ARAP2	116984	hgsc.bcm.edu	36	4	35792278	35792280	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TTC	TTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
QRFPR	84109	hgsc.bcm.edu	36	4	122470091	122470092	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TT	TT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ADAD1	132612	hgsc.bcm.edu	36	4	123521661	123521661	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RGMB	285704	hgsc.bcm.edu	36	5	98143619	98143621	+	In_Frame_Del	DEL	ATA	ATA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	ATA	ATA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
APC	324	hgsc.bcm.edu	36	5	112203850	112203851	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
THG1L	54974	hgsc.bcm.edu	36	5	157091043	157091047	+	Frame_Shift_Del	DEL	AAGTT	AAGTT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AAGTT	AAGTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NSD1	64324	hgsc.bcm.edu	36	5	176651600	176651602	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AAG	AAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TRIM26	7726	hgsc.bcm.edu	36	6	30261914	30261915	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CA	CA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PPP1R10	5514	hgsc.bcm.edu	36	6	30682382	30682384	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TTC	TTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ARID1B	57492	hgsc.bcm.edu	36	6	157543981	157543982	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ACAT2	8435	hgsc.bcm.edu	36	6	160118358	160118360	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NUP205	23165	hgsc.bcm.edu	36	7	134929971	134929973	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ARFGEF1	10565	hgsc.bcm.edu	36	8	68328274	68328275	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TT	TT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FAM82B	51115	hgsc.bcm.edu	36	8	87556172	87556174	+	In_Frame_Del	DEL	TCC	TCC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TCC	TCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PTK2	5747	hgsc.bcm.edu	36	8	141747680	141747680	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MAMDC2	256691	hgsc.bcm.edu	36	9	71849405	71849406	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SPTLC1	10558	hgsc.bcm.edu	36	9	93861318	93861319	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SPTLC1	10558	hgsc.bcm.edu	36	9	93910926	93910928	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TTC	TTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
REXO4	57109	hgsc.bcm.edu	36	9	135261970	135261972	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DCLRE1C	64421	hgsc.bcm.edu	36	10	14991105	14991107	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ANK3	288	hgsc.bcm.edu	36	10	61505380	61505381	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CA	CA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
VDAC2	7417	hgsc.bcm.edu	36	10	76649105	76649106	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MARCH5	54708	hgsc.bcm.edu	36	10	94060903	94060905	+	In_Frame_Del	DEL	GAT	GAT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GAT	GAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TCF7L2	6934	hgsc.bcm.edu	36	10	114915307	114915307	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MUC6	4588	hgsc.bcm.edu	36	11	1008089	1008089	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MUC6	4588	hgsc.bcm.edu	36	11	1008093	1008094	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MUC2	4583	hgsc.bcm.edu	36	11	1082802	1082802	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
KRTAP5-1	387264	hgsc.bcm.edu	36	11	1562697	1562726	+	In_Frame_Del	DEL	CCACAGCCACCCTTGGATCCCCCACAAGAG	CCACAGCCACCCTTGGATCCCCCACAAGAG	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CCACAGCCACCCTTGGATCCCCCACAAGAG	CCACAGCCACCCTTGGATCCCCCACAAGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CYBASC3	220002	hgsc.bcm.edu	36	11	60880661	60880663	+	In_Frame_Del	DEL	CCA	CCA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CCA	CCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
ESRRA	2101	hgsc.bcm.edu	36	11	63839872	63839874	+	In_Frame_Del	DEL	GGG	GGG	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GGG	GGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
WDR66	144406	hgsc.bcm.edu	36	12	120843780	120843781	+	In_Frame_Ins	INS	-	-	GAGGAGGAGGAGAAA	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NCOR2	9612	hgsc.bcm.edu	36	12	123390674	123390675	+	In_Frame_Ins	INS	-	-	GCCGCTGCT	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TPTE2	93492	hgsc.bcm.edu	36	13	18898633	18898636	+	Frame_Shift_Del	DEL	TGTC	TGTC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TGTC	TGTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
N4BP2L2	10443	hgsc.bcm.edu	36	13	31915222	31915223	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FBXO34	55030	hgsc.bcm.edu	36	14	54888367	54888369	+	In_Frame_Del	DEL	AAA	AAA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AAA	AAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
MARK3	4140	hgsc.bcm.edu	36	14	102941201	102941202	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PACS2	23241	hgsc.bcm.edu	36	14	104889840	104889842	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GOLGA6L6	0	hgsc.bcm.edu	36	15	18999858	18999899	+	In_Frame_Del	DEL	GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT	GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT	GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
VPS13C	54832	hgsc.bcm.edu	36	15	59989757	59989758	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FAM174B	400451	hgsc.bcm.edu	36	15	90999683	90999688	+	In_Frame_Del	DEL	TGGAGC	TGGAGC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TGGAGC	TGGAGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NUDT16L1	84309	hgsc.bcm.edu	36	16	4685141	4685143	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PPL	5493	hgsc.bcm.edu	36	16	4880186	4880188	+	Frame_Shift_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CDH1	51343	hgsc.bcm.edu	36	16	67403619	67403620	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CA	CA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
COG4	25839	hgsc.bcm.edu	36	16	69074132	69074134	+	Frame_Shift_Del	DEL	CCT	CCT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CCT	CCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HYDIN	54768	hgsc.bcm.edu	36	16	69512205	69512219	+	In_Frame_Del	DEL	GCGCTCCTTCTCCGT	GCGCTCCTTCTCCGT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GCGCTCCTTCTCCGT	GCGCTCCTTCTCCGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CNP	4880	hgsc.bcm.edu	36	17	37374153	37374155	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
WNK4	65266	hgsc.bcm.edu	36	17	38193716	38193717	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TT	TT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
HEXIM1	10614	hgsc.bcm.edu	36	17	40583309	40583314	+	In_Frame_Del	DEL	GGAGCT	GGAGCT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GGAGCT	GGAGCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RNF43	54894	hgsc.bcm.edu	36	17	53792564	53792565	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CA	CA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SOX9	6662	hgsc.bcm.edu	36	17	67630519	67630521	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AAG	AAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
USP14	9097	hgsc.bcm.edu	36	18	189221	189223	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SMCHD1	23347	hgsc.bcm.edu	36	18	2656192	2656194	+	In_Frame_Del	DEL	ACA	ACA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	ACA	ACA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TGIF1	7050	hgsc.bcm.edu	36	18	3442223	3442223	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TXNDC2	84203	hgsc.bcm.edu	36	18	9877389	9877433	+	In_Frame_Del	DEL	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
GATA6	2627	hgsc.bcm.edu	36	18	18016737	18016738	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
C18orf34	374864	hgsc.bcm.edu	36	18	29180367	29180368	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TT	TT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
C19orf55	148137	hgsc.bcm.edu	36	19	40950778	40950778	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PNKP	11284	hgsc.bcm.edu	36	19	55062219	55062225	+	Frame_Shift_Del	DEL	CTCCCCC	CTCCCCC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTCCCCC	CTCCCCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
NUP62	23636	hgsc.bcm.edu	36	19	55104040	55104042	+	In_Frame_Del	DEL	GGC	GGC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	GGC	GGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
TSEN34	79042	hgsc.bcm.edu	36	19	59387533	59387534	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
DEFB126	81623	hgsc.bcm.edu	36	20	74311	74312	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
RTEL1	51750	hgsc.bcm.edu	36	20	61792171	61792173	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
KRTAP10-7	386675	hgsc.bcm.edu	36	21	44845084	44845098	+	Frame_Shift_Del	DEL	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FAM118A	55007	hgsc.bcm.edu	36	22	44107055	44107058	+	Frame_Shift_Del	DEL	TCTT	TCTT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	TCTT	TCTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
CXorf23	256643	hgsc.bcm.edu	36	X	19878815	19878815	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
FAM123B	139285	hgsc.bcm.edu	36	X	63328221	63328222	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
SMARCA1	6594	hgsc.bcm.edu	36	X	128484858	128484860	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
PLXNB3	5365	hgsc.bcm.edu	36	X	152684919	152684920	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-CK-6747-01A-11D-1835-10	TCGA-CK-6747-10A-01D-1835-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e07ea99-283d-4404-9777-097d3030691b	14cd6385-3a7e-4ec7-bf1e-698524efac6e
