Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
HEATR2	54919	hgsc.bcm.edu	36	7	762974	762974	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAD1L1	8379	hgsc.bcm.edu	36	7	1822377	1822377	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHST12	55501	hgsc.bcm.edu	36	7	2438896	2438896	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CARD11	84433	hgsc.bcm.edu	36	7	2925707	2925707	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CARD11	84433	hgsc.bcm.edu	36	7	2944120	2944120	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FOXK1	221937	hgsc.bcm.edu	36	7	4768456	4768456	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RBAK	57786	hgsc.bcm.edu	36	7	5070847	5070847	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TNRC18	84629	hgsc.bcm.edu	36	7	5367797	5367797	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CRHR2	1395	hgsc.bcm.edu	36	7	30662124	30662124	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VPS41	27072	hgsc.bcm.edu	36	7	38763043	38763043	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CCDC132	55610	hgsc.bcm.edu	36	7	92817134	92817134	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TRRAP	8295	hgsc.bcm.edu	36	7	98407405	98407405	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GPC2	221914	hgsc.bcm.edu	36	7	99609511	99609511	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TFR2	7036	hgsc.bcm.edu	36	7	100066531	100066531	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CUX1	1523	hgsc.bcm.edu	36	7	101626693	101626693	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LRWD1	222229	hgsc.bcm.edu	36	7	101899919	101899919	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PIK3CG	5294	hgsc.bcm.edu	36	7	106295318	106295318	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PIK3CG	5294	hgsc.bcm.edu	36	7	106296815	106296815	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF277	11179	hgsc.bcm.edu	36	7	111723527	111723527	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MDFIC	29969	hgsc.bcm.edu	36	7	114406902	114406902	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
JHDM1D	80853	hgsc.bcm.edu	36	7	139465469	139465469	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR9A2	135924	hgsc.bcm.edu	36	7	142433667	142433667	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM115A	9747	hgsc.bcm.edu	36	7	143204468	143204468	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SSPO	23145	hgsc.bcm.edu	36	7	149144461	149144461	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMEM176A	55365	hgsc.bcm.edu	36	7	150129616	150129616	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NOS3	342977	hgsc.bcm.edu	36	7	150341868	150341868	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RBM33	155435	hgsc.bcm.edu	36	7	155223086	155223086	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CST11	140880	hgsc.bcm.edu	36	20	23379198	23379198	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MYLK2	85366	hgsc.bcm.edu	36	20	29878309	29878309	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C20orf71	128861	hgsc.bcm.edu	36	20	31275929	31275929	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NECAB3	63941	hgsc.bcm.edu	36	20	31711727	31711727	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AHCY	191	hgsc.bcm.edu	36	20	32342249	32342249	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AHCY	191	hgsc.bcm.edu	36	20	32346935	32346935	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CEP250	11190	hgsc.bcm.edu	36	20	33518566	33518566	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CEP250	11190	hgsc.bcm.edu	36	20	33524710	33524710	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SRC	6714	hgsc.bcm.edu	36	20	35458013	35458013	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADA	100	hgsc.bcm.edu	36	20	42688591	42688591	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SEMG1	6406	hgsc.bcm.edu	36	20	43270691	43270691	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MATN4	8785	hgsc.bcm.edu	36	20	43366660	43366660	+	Missense_Mutation	SNP	G	G	A	rs2233092	byFrequency	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SNX21	90203	hgsc.bcm.edu	36	20	43902963	43902963	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ACOT8	10005	hgsc.bcm.edu	36	20	43905766	43905766	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MMP9	4318	hgsc.bcm.edu	36	20	44076211	44076211	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF334	55713	hgsc.bcm.edu	36	20	44563872	44563872	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CSTF1	1477	hgsc.bcm.edu	36	20	54404046	54404046	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TFAP2C	7022	hgsc.bcm.edu	36	20	54640150	54640150	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BMP7	655	hgsc.bcm.edu	36	20	55181760	55181760	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BMP7	655	hgsc.bcm.edu	36	20	55192262	55192262	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LSM14B	149986	hgsc.bcm.edu	36	20	60133111	60133111	+	Silent	SNP	G	G	A	rs57762112	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GTPBP5	26164	hgsc.bcm.edu	36	20	60206392	60206392	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OSBPL2	9885	hgsc.bcm.edu	36	20	60289548	60289548	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRIC285	85441	hgsc.bcm.edu	36	20	61666873	61666873	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MYT1	9088	hgsc.bcm.edu	36	20	62309681	62309681	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CECR5	27440	hgsc.bcm.edu	36	22	16005964	16005964	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RANBP1	5902	hgsc.bcm.edu	36	22	18489856	18489856	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HIC2	23119	hgsc.bcm.edu	36	22	20129858	20129858	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMARCB1	6598	hgsc.bcm.edu	36	22	22497488	22497488	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADRBK2	157	hgsc.bcm.edu	36	22	24387588	24387588	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SEZ6L	23544	hgsc.bcm.edu	36	22	25019086	25019086	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHEK2	11200	hgsc.bcm.edu	36	22	27421840	27421840	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHEK2	11200	hgsc.bcm.edu	36	22	27421841	27421841	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SF3A1	10291	hgsc.bcm.edu	36	22	29065202	29065202	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
INPP5J	27124	hgsc.bcm.edu	36	22	29853968	29853968	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DEPDC5	9681	hgsc.bcm.edu	36	22	30509902	30509902	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DEPDC5	9681	hgsc.bcm.edu	36	22	30632401	30632401	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MFNG	4242	hgsc.bcm.edu	36	22	36206252	36206252	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SUN2	25777	hgsc.bcm.edu	36	22	37464658	37464658	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
APOBEC3H	164668	hgsc.bcm.edu	36	22	37826255	37826255	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TNRC6B	23112	hgsc.bcm.edu	36	22	38999432	38999432	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADSL	158	hgsc.bcm.edu	36	22	39087539	39087539	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MEI1	150365	hgsc.bcm.edu	36	22	40510726	40510726	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CYP2D6	1565	hgsc.bcm.edu	36	22	40853404	40853404	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLXNB2	23654	hgsc.bcm.edu	36	22	49061186	49061186	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PPP6R2	0	hgsc.bcm.edu	36	22	49179397	49179397	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHD8	57680	hgsc.bcm.edu	36	14	20941594	20941594	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SALL2	6297	hgsc.bcm.edu	36	14	21062431	21062431	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C14orf135	64430	hgsc.bcm.edu	36	14	59651843	59651843	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PAPLN	89932	hgsc.bcm.edu	36	14	72799175	72799175	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VIPAR	0	hgsc.bcm.edu	36	14	76971968	76971968	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FOXN3	1112	hgsc.bcm.edu	36	14	88698796	88698796	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RIN3	79890	hgsc.bcm.edu	36	14	92188587	92188587	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHGA	1113	hgsc.bcm.edu	36	14	92467679	92467679	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SERPINA1	5265	hgsc.bcm.edu	36	14	93917138	93917138	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EVL	51466	hgsc.bcm.edu	36	14	99659644	99659644	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC25A47	0	hgsc.bcm.edu	36	14	99863318	99863318	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TRAF3	7187	hgsc.bcm.edu	36	14	102441684	102441684	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
INF2	64423	hgsc.bcm.edu	36	14	104238984	104238984	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0284	283638	hgsc.bcm.edu	36	14	104424456	104424456	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0284	283638	hgsc.bcm.edu	36	14	104430460	104430460	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C19orf25	148223	hgsc.bcm.edu	36	19	1426092	1426092	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AMH	268	hgsc.bcm.edu	36	19	2200677	2200677	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DIRAS1	148252	hgsc.bcm.edu	36	19	2668422	2668422	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SGTA	6449	hgsc.bcm.edu	36	19	2718203	2718203	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C19orf71	100128569	hgsc.bcm.edu	36	19	3495004	3495004	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TJP3	27134	hgsc.bcm.edu	36	19	3679609	3679609	+	Missense_Mutation	SNP	G	G	A	rs2067019	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PIAS4	51588	hgsc.bcm.edu	36	19	3964086	3964086	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MCOLN1	57192	hgsc.bcm.edu	36	19	7495943	7495943	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADAMTS10	81794	hgsc.bcm.edu	36	19	8563688	8563688	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF317	57693	hgsc.bcm.edu	36	19	9132535	9132535	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ICAM5	7087	hgsc.bcm.edu	36	19	10265455	10265455	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMARCA4	6597	hgsc.bcm.edu	36	19	11004976	11004976	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF653	115950	hgsc.bcm.edu	36	19	11458638	11458638	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF700	90592	hgsc.bcm.edu	36	19	11921898	11921898	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRDX2	7001	hgsc.bcm.edu	36	19	12768933	12768933	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CALR	811	hgsc.bcm.edu	36	19	12911366	12911366	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DDX39	10212	hgsc.bcm.edu	36	19	14381446	14381446	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF333	84449	hgsc.bcm.edu	36	19	14676943	14676943	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR10H1	26539	hgsc.bcm.edu	36	19	15779805	15779805	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TSHZ3	57616	hgsc.bcm.edu	36	19	36461818	36461818	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
U2AF1L4	199746	hgsc.bcm.edu	36	19	40926861	40926861	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C19orf55	148137	hgsc.bcm.edu	36	19	40950578	40950578	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WDR62	284403	hgsc.bcm.edu	36	19	41287328	41287328	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RYR1	6261	hgsc.bcm.edu	36	19	43699877	43699877	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SARS2	54938	hgsc.bcm.edu	36	19	44104517	44104517	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF780B	163131	hgsc.bcm.edu	36	19	45232247	45232247	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MIA	8190	hgsc.bcm.edu	36	19	45973535	45973535	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CEACAM7	1087	hgsc.bcm.edu	36	19	46882685	46882685	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MEGF8	1954	hgsc.bcm.edu	36	19	47530094	47530094	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PSG2	5670	hgsc.bcm.edu	36	19	48276955	48276955	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLAUR	5329	hgsc.bcm.edu	36	19	48842537	48842537	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF227	7770	hgsc.bcm.edu	36	19	49431569	49431569	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FOSB	2354	hgsc.bcm.edu	36	19	50666326	50666326	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZC3H4	23211	hgsc.bcm.edu	36	19	52280438	52280438	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DHDH	27294	hgsc.bcm.edu	36	19	54139488	54139488	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TRPM4	54795	hgsc.bcm.edu	36	19	54383764	54383764	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF808	388558	hgsc.bcm.edu	36	19	57748294	57748294	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF845	91664	hgsc.bcm.edu	36	19	58548262	58548262	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF761	388561	hgsc.bcm.edu	36	19	58651154	58651154	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRKCG	5582	hgsc.bcm.edu	36	19	59079285	59079285	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CACNG6	59285	hgsc.bcm.edu	36	19	59207057	59207057	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIR3DP1	768329	hgsc.bcm.edu	36	19	59993433	59993433	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C19orf51	352909	hgsc.bcm.edu	36	19	60364505	60364505	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PTPRH	5794	hgsc.bcm.edu	36	19	60405282	60405282	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EPN1	29924	hgsc.bcm.edu	36	19	60881920	60881920	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF787	126208	hgsc.bcm.edu	36	19	61291326	61291326	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF835	90485	hgsc.bcm.edu	36	19	61867187	61867187	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF8	7554	hgsc.bcm.edu	36	19	63498370	63498370	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC27A5	10998	hgsc.bcm.edu	36	19	63715065	63715065	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARHGEF10	9639	hgsc.bcm.edu	36	8	1844976	1844976	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ANGPT2	285	hgsc.bcm.edu	36	8	6348152	6348152	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PPP1R3B	79660	hgsc.bcm.edu	36	8	9035845	9035845	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RP1L1	94137	hgsc.bcm.edu	36	8	10507997	10507997	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DEFB136	613210	hgsc.bcm.edu	36	8	11869011	11869011	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DLC1	10395	hgsc.bcm.edu	36	8	12997123	12997123	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM160B2	64760	hgsc.bcm.edu	36	8	22015269	22015269	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BMP1	649	hgsc.bcm.edu	36	8	22087137	22087137	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1967	57805	hgsc.bcm.edu	36	8	22532769	22532769	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PTK2B	2185	hgsc.bcm.edu	36	8	27353816	27353816	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
INTS9	55756	hgsc.bcm.edu	36	8	28725883	28725883	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIF13B	23303	hgsc.bcm.edu	36	8	29036854	29036854	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BRF2	55290	hgsc.bcm.edu	36	8	37821754	37821754	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TACC1	6867	hgsc.bcm.edu	36	8	38803892	38803892	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HTRA4	203100	hgsc.bcm.edu	36	8	38959180	38959180	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MYST3	7994	hgsc.bcm.edu	36	8	41955319	41955319	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC20A2	6575	hgsc.bcm.edu	36	8	42421344	42421344	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SGK196	84197	hgsc.bcm.edu	36	8	43077902	43077902	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PXDNL	137902	hgsc.bcm.edu	36	8	52483486	52483486	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OPRK1	4986	hgsc.bcm.edu	36	8	54304563	54304563	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RP1	10982	hgsc.bcm.edu	36	8	55705393	55705393	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ASPH	444	hgsc.bcm.edu	36	8	62757579	62757579	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CSPP1	79848	hgsc.bcm.edu	36	8	68250187	68250187	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HNF4G	3174	hgsc.bcm.edu	36	8	76614848	76614848	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HNF4G	3174	hgsc.bcm.edu	36	8	76614849	76614849	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CPNE3	8895	hgsc.bcm.edu	36	8	87610422	87610422	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VPS13B	157680	hgsc.bcm.edu	36	8	100890820	100890820	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VPS13B	157680	hgsc.bcm.edu	36	8	100935618	100935618	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FZD6	8323	hgsc.bcm.edu	36	8	104406469	104406469	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TM7SF4	81501	hgsc.bcm.edu	36	8	105430710	105430710	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EIF3E	3646	hgsc.bcm.edu	36	8	109316432	109316432	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PKHD1L1	93035	hgsc.bcm.edu	36	8	110463876	110463876	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
COL14A1	7373	hgsc.bcm.edu	36	8	121280940	121280940	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF572	137209	hgsc.bcm.edu	36	8	126059260	126059260	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TG	7038	hgsc.bcm.edu	36	8	134015001	134015001	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CYP11B2	1585	hgsc.bcm.edu	36	8	143991025	143991025	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RHPN1	114822	hgsc.bcm.edu	36	8	144529890	144529890	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZC3H3	23144	hgsc.bcm.edu	36	8	144691741	144691741	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CPSF1	29894	hgsc.bcm.edu	36	8	145590568	145590568	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF250	58500	hgsc.bcm.edu	36	8	146077877	146077877	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ACAP3	116983	hgsc.bcm.edu	36	1	1228419	1228419	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DVL1	8215	hgsc.bcm.edu	36	1	1265333	1265333	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDK11B	0	hgsc.bcm.edu	36	1	1562010	1562010	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDK11B	0	hgsc.bcm.edu	36	1	1562400	1562400	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC35E2	9906	hgsc.bcm.edu	36	1	1659672	1659672	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GABRD	2563	hgsc.bcm.edu	36	1	1949466	1949466	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TP73	7161	hgsc.bcm.edu	36	1	3636442	3636442	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHD5	450091	hgsc.bcm.edu	36	1	6135117	6135117	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
THAP3	90326	hgsc.bcm.edu	36	1	6611267	6611267	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PER3	8863	hgsc.bcm.edu	36	1	7783765	7783765	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMEM201	199953	hgsc.bcm.edu	36	1	9579684	9579684	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C1orf127	148345	hgsc.bcm.edu	36	1	10940299	10940299	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAD2L2	10459	hgsc.bcm.edu	36	1	11659546	11659546	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPEN	64783	hgsc.bcm.edu	36	1	16119974	16119974	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARHGEF19	128272	hgsc.bcm.edu	36	1	16405104	16405104	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATP13A2	23400	hgsc.bcm.edu	36	1	17195106	17195106	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NBL1	4681	hgsc.bcm.edu	36	1	19856050	19856050	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RAP1GAP	5909	hgsc.bcm.edu	36	1	21797129	21797129	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RAP1GAP	5909	hgsc.bcm.edu	36	1	21805183	21805183	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GALE	2582	hgsc.bcm.edu	36	1	23997756	23997756	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CNKSR1	10256	hgsc.bcm.edu	36	1	26387948	26387948	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GPR3	2827	hgsc.bcm.edu	36	1	27593553	27593553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TINAGL1	64129	hgsc.bcm.edu	36	1	31823187	31823187	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HDAC1	3065	hgsc.bcm.edu	36	1	32565799	32565799	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0319L	79932	hgsc.bcm.edu	36	1	35673176	35673176	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EIF2C3	192669	hgsc.bcm.edu	36	1	36293881	36293881	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM176B	55194	hgsc.bcm.edu	36	1	36561170	36561170	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GRIK3	2899	hgsc.bcm.edu	36	1	37044328	37044328	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
COL9A2	1298	hgsc.bcm.edu	36	1	40541036	40541036	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C1orf84	149469	hgsc.bcm.edu	36	1	43641541	43641541	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IPO13	9670	hgsc.bcm.edu	36	1	44188046	44188046	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZSWIM5	57643	hgsc.bcm.edu	36	1	45257258	45257258	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC5A9	200010	hgsc.bcm.edu	36	1	48477635	48477635	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTC39A	22996	hgsc.bcm.edu	36	1	51527130	51527130	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MRPL37	51253	hgsc.bcm.edu	36	1	54443281	54443281	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HOOK1	51361	hgsc.bcm.edu	36	1	60111164	60111164	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DOCK7	85440	hgsc.bcm.edu	36	1	62886405	62886405	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AK5	26289	hgsc.bcm.edu	36	1	77774215	77774215	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GBP3	51062	hgsc.bcm.edu	36	1	89247765	89247765	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMEM56	148534	hgsc.bcm.edu	36	1	95388396	95388396	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATXN7L2	127002	hgsc.bcm.edu	36	1	109833029	109833029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KCNA10	3744	hgsc.bcm.edu	36	1	110862142	110862142	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DENND2C	163259	hgsc.bcm.edu	36	1	114931994	114931994	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VANGL1	81839	hgsc.bcm.edu	36	1	116008235	116008235	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PTGFRN	5738	hgsc.bcm.edu	36	1	117311077	117311077	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARNT	375056	hgsc.bcm.edu	36	1	149085372	149085372	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
POGZ	23126	hgsc.bcm.edu	36	1	149645113	149645113	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADAM15	8751	hgsc.bcm.edu	36	1	153301072	153301072	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
UBQLN4	56893	hgsc.bcm.edu	36	1	154278351	154278351	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMG5	23381	hgsc.bcm.edu	36	1	154509862	154509862	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CCT3	7203	hgsc.bcm.edu	36	1	154557363	154557363	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RHBG	57127	hgsc.bcm.edu	36	1	154613874	154613874	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
INSRR	3645	hgsc.bcm.edu	36	1	155090285	155090285	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPTA1	6708	hgsc.bcm.edu	36	1	156878873	156878873	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DARC	2532	hgsc.bcm.edu	36	1	157442128	157442128	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATP1A2	477	hgsc.bcm.edu	36	1	158361578	158361578	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
USP21	29761	hgsc.bcm.edu	36	1	159397481	159397481	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NOS1AP	9722	hgsc.bcm.edu	36	1	160603695	160603695	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CEP350	9857	hgsc.bcm.edu	36	1	178331366	178331366	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GLUL	2752	hgsc.bcm.edu	36	1	180620355	180620355	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
UCHL5	51377	hgsc.bcm.edu	36	1	191285528	191285528	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATP6V1G3	127124	hgsc.bcm.edu	36	1	196764880	196764880	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GPR37L1	9283	hgsc.bcm.edu	36	1	200363644	200363644	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CNTN2	6900	hgsc.bcm.edu	36	1	203308941	203308941	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DSTYK	25778	hgsc.bcm.edu	36	1	203397119	203397119	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KLHDC8A	55220	hgsc.bcm.edu	36	1	203575517	203575517	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC26A9	115019	hgsc.bcm.edu	36	1	204150695	204150695	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LGTN	1939	hgsc.bcm.edu	36	1	204839713	204839713	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLXNA2	5362	hgsc.bcm.edu	36	1	206278406	206278406	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
USH2A	7399	hgsc.bcm.edu	36	1	213880531	213880531	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RRP15	51018	hgsc.bcm.edu	36	1	216570947	216570947	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OBSCN	84033	hgsc.bcm.edu	36	1	226534232	226534232	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TRIM67	440730	hgsc.bcm.edu	36	1	229409086	229409086	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCNXL2	80003	hgsc.bcm.edu	36	1	231200666	231200666	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC35F3	148641	hgsc.bcm.edu	36	1	232519042	232519042	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RYR2	6262	hgsc.bcm.edu	36	1	235799159	235799159	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FH	3949	hgsc.bcm.edu	36	1	239730381	239730381	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NLRP3	114548	hgsc.bcm.edu	36	1	245648933	245648933	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR11L1	391189	hgsc.bcm.edu	36	1	246071636	246071636	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR2T10	127069	hgsc.bcm.edu	36	1	246822852	246822852	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SIRT3	23410	hgsc.bcm.edu	36	11	208904	208904	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IFITM3	10410	hgsc.bcm.edu	36	11	310649	310649	+	Silent	SNP	G	G	A	rs11553885	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PNPLA2	57104	hgsc.bcm.edu	36	11	812398	812398	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TOLLIP	54472	hgsc.bcm.edu	36	11	1254956	1254956	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
STIM1	6786	hgsc.bcm.edu	36	11	4064313	4064313	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR52K1	390036	hgsc.bcm.edu	36	11	4467055	4467055	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR2AG1	144125	hgsc.bcm.edu	36	11	6763739	6763739	+	Missense_Mutation	SNP	C	C	G	rs2659879	by2Hit2Allele;byCluster	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C11orf16	56673	hgsc.bcm.edu	36	11	8910384	8910384	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KCNC1	3746	hgsc.bcm.edu	36	11	17714494	17714494	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IGSF22	283284	hgsc.bcm.edu	36	11	18693834	18693834	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRRG4	79056	hgsc.bcm.edu	36	11	32831502	32831502	+	Silent	SNP	G	G	A	rs11032025	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CAPRIN1	4076	hgsc.bcm.edu	36	11	34054485	34054485	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHST1	8534	hgsc.bcm.edu	36	11	45628340	45628340	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MADD	8567	hgsc.bcm.edu	36	11	47264642	47264642	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NDUFS3	4722	hgsc.bcm.edu	36	11	47562467	47562467	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C1QTNF4	114900	hgsc.bcm.edu	36	11	47568268	47568268	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR5T2	219464	hgsc.bcm.edu	36	11	55756318	55756318	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZFP91	80829	hgsc.bcm.edu	36	11	58141539	58141539	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SYT7	9066	hgsc.bcm.edu	36	11	61080245	61080245	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AHNAK	79026	hgsc.bcm.edu	36	11	62050211	62050211	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AHNAK	79026	hgsc.bcm.edu	36	11	62053026	62053026	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BSCL2	26580	hgsc.bcm.edu	36	11	62216441	62216441	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLCB3	5331	hgsc.bcm.edu	36	11	63786045	63786045	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC22A11	55867	hgsc.bcm.edu	36	11	64093874	64093874	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SF1	7536	hgsc.bcm.edu	36	11	64289550	64289550	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATG2A	23130	hgsc.bcm.edu	36	11	64419421	64419421	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PC	5624	hgsc.bcm.edu	36	11	66374057	66374057	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IGHMBP2	3508	hgsc.bcm.edu	36	11	68435611	68435611	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CTTN	2017	hgsc.bcm.edu	36	11	69940855	69940855	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARAP1	116985	hgsc.bcm.edu	36	11	72074748	72074748	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MYO7A	4647	hgsc.bcm.edu	36	11	76563538	76563538	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KCTD21	283219	hgsc.bcm.edu	36	11	77562884	77562884	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
USP35	57558	hgsc.bcm.edu	36	11	77588914	77588914	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GRM5	2915	hgsc.bcm.edu	36	11	88026034	88026034	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NAALAD2	10003	hgsc.bcm.edu	36	11	89531021	89531021	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAT3	120114	hgsc.bcm.edu	36	11	91726224	91726224	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C11orf1	64776	hgsc.bcm.edu	36	11	111258422	111258422	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DSCAML1	57453	hgsc.bcm.edu	36	11	116808354	116808354	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SIAE	54414	hgsc.bcm.edu	36	11	124012262	124012262	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RPUSD4	84881	hgsc.bcm.edu	36	11	125584647	125584647	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRDM10	56980	hgsc.bcm.edu	36	11	129320096	129320096	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
B3GAT1	27087	hgsc.bcm.edu	36	11	133759231	133759231	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DUSP22	56940	hgsc.bcm.edu	36	6	293191	293191	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC22A23	63027	hgsc.bcm.edu	36	6	3232311	3232311	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAK	57538	hgsc.bcm.edu	36	6	10910128	10910128	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATXN1	6310	hgsc.bcm.edu	36	6	16435846	16435846	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HIST1H2BD	3017	hgsc.bcm.edu	36	6	26266740	26266740	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HIST1H3D	8351	hgsc.bcm.edu	36	6	26305367	26305367	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZKSCAN4	387032	hgsc.bcm.edu	36	6	28320944	28320944	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MOG	4340	hgsc.bcm.edu	36	6	29746112	29746112	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LY6G6C	80740	hgsc.bcm.edu	36	6	31795008	31795008	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EHMT2	10919	hgsc.bcm.edu	36	6	31963602	31963602	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CYP21A2	1589	hgsc.bcm.edu	36	6	32114301	32114301	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TNXB	7148	hgsc.bcm.edu	36	6	32154954	32154954	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BRD2	6046	hgsc.bcm.edu	36	6	33053325	33053325	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SCUBE3	222663	hgsc.bcm.edu	36	6	35303398	35303398	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DAAM2	23500	hgsc.bcm.edu	36	6	39943434	39943434	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FOXP4	116113	hgsc.bcm.edu	36	6	41673499	41673499	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MRPL2	51253	hgsc.bcm.edu	36	6	43131314	43131314	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
POLH	10721	hgsc.bcm.edu	36	6	43686323	43686323	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DST	667	hgsc.bcm.edu	36	6	56572902	56572902	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HTR1B	3351	hgsc.bcm.edu	36	6	78229607	78229607	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BCKDHB	594	hgsc.bcm.edu	36	6	81039635	81039635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DOPEY1	23033	hgsc.bcm.edu	36	6	83934378	83934378	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SIM1	6492	hgsc.bcm.edu	36	6	101002011	101002011	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRDM1	639	hgsc.bcm.edu	36	6	106659590	106659590	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AKD1	221264	hgsc.bcm.edu	36	6	109961319	109961319	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SAMD3	154075	hgsc.bcm.edu	36	6	130517855	130517855	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ALDH8A1	64577	hgsc.bcm.edu	36	6	135291960	135291960	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAP3K5	4217	hgsc.bcm.edu	36	6	137061370	137061370	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VTA1	51534	hgsc.bcm.edu	36	6	142561405	142561405	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SYNE1	23345	hgsc.bcm.edu	36	6	152502834	152502834	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TULP4	56995	hgsc.bcm.edu	36	6	158793179	158793179	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TULP4	56995	hgsc.bcm.edu	36	6	158843531	158843531	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PACRG	135138	hgsc.bcm.edu	36	6	163155278	163155278	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMG6	23293	hgsc.bcm.edu	36	17	1915637	1915637	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CYB5D2	124936	hgsc.bcm.edu	36	17	3993839	3993839	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ENO3	2027	hgsc.bcm.edu	36	17	4799133	4799133	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TP53	7157	hgsc.bcm.edu	36	17	7518263	7518263	+	Missense_Mutation	SNP	C	C	T	rs11540652	byHapMap	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PIK3R6	146850	hgsc.bcm.edu	36	17	8673777	8673777	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAP2K4	6416	hgsc.bcm.edu	36	17	11925509	11925509	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SDF2	6388	hgsc.bcm.edu	36	17	24013018	24013018	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NUFIP2	57532	hgsc.bcm.edu	36	17	24645101	24645101	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NUFIP2	57532	hgsc.bcm.edu	36	17	24645102	24645102	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDK12	0	hgsc.bcm.edu	36	17	34900391	34900391	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KRT20	54474	hgsc.bcm.edu	36	17	36288072	36288072	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
JUP	3728	hgsc.bcm.edu	36	17	37177289	37177289	+	Silent	SNP	G	G	A	rs34890640	byFrequency	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KCNH4	23415	hgsc.bcm.edu	36	17	37575103	37575103	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ITGA2B	3674	hgsc.bcm.edu	36	17	39807994	39807994	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FZD2	2535	hgsc.bcm.edu	36	17	39991906	39991906	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GFAP	2670	hgsc.bcm.edu	36	17	40348367	40348367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIF18B	146909	hgsc.bcm.edu	36	17	40368305	40368305	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VEZF1	7716	hgsc.bcm.edu	36	17	53411603	53411603	+	Silent	SNP	T	T	C	rs2229371	byFrequency	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RNF43	54894	hgsc.bcm.edu	36	17	53790826	53790826	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SEPT4	5414	hgsc.bcm.edu	36	17	53953685	53953685	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MED13	9969	hgsc.bcm.edu	36	17	57414694	57414694	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC16A6	9120	hgsc.bcm.edu	36	17	63781730	63781730	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARMC7	79637	hgsc.bcm.edu	36	17	70618028	70618028	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CASKIN2	57513	hgsc.bcm.edu	36	17	71012705	71012705	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ITGB4	3691	hgsc.bcm.edu	36	17	71251525	71251525	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EVPL	2125	hgsc.bcm.edu	36	17	71515850	71515850	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
USP36	57602	hgsc.bcm.edu	36	17	74336601	74336601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RPTOR	57521	hgsc.bcm.edu	36	17	76513817	76513817	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BAHCC1	57597	hgsc.bcm.edu	36	17	77034437	77034437	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCYT2	5833	hgsc.bcm.edu	36	17	77460751	77460751	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FASN	2194	hgsc.bcm.edu	36	17	77642411	77642411	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NARF	51444	hgsc.bcm.edu	36	17	78036699	78036699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
APP	351	hgsc.bcm.edu	36	21	26294286	26294286	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RWDD2B	10069	hgsc.bcm.edu	36	21	29300808	29300808	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CLDN8	9073	hgsc.bcm.edu	36	21	30509481	30509481	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SON	6651	hgsc.bcm.edu	36	21	33848992	33848992	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RIPK4	54101	hgsc.bcm.edu	36	21	42035001	42035001	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
COL6A2	1292	hgsc.bcm.edu	36	21	46376716	46376716	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCNT	5116	hgsc.bcm.edu	36	21	46579093	46579093	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCNT	5116	hgsc.bcm.edu	36	21	46591091	46591091	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCNT	5116	hgsc.bcm.edu	36	21	46611013	46611013	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SNRNP25	79622	hgsc.bcm.edu	36	16	45855	45855	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PDIA2	64714	hgsc.bcm.edu	36	16	276692	276692	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AXIN1	8312	hgsc.bcm.edu	36	16	278178	278178	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MSLNL	401827	hgsc.bcm.edu	36	16	763211	763211	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHTF18	63922	hgsc.bcm.edu	36	16	784077	784077	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LMF1	64788	hgsc.bcm.edu	36	16	859948	859948	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DCI	1632	hgsc.bcm.edu	36	16	2233148	2233148	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MEFV	4210	hgsc.bcm.edu	36	16	3233378	3233378	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CLUAP1	23059	hgsc.bcm.edu	36	16	3498348	3498348	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADCY9	115	hgsc.bcm.edu	36	16	3964697	3964697	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CLEC16A	23274	hgsc.bcm.edu	36	16	10980715	10980715	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0430	9665	hgsc.bcm.edu	36	16	15637502	15637502	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MYH11	4629	hgsc.bcm.edu	36	16	15722984	15722984	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMG1	23049	hgsc.bcm.edu	36	16	18758558	18758558	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
APOB48R	55911	hgsc.bcm.edu	36	16	28415404	28415404	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRR14	78994	hgsc.bcm.edu	36	16	30573666	30573666	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FBXL19	54620	hgsc.bcm.edu	36	16	30847407	30847407	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ITGAX	3687	hgsc.bcm.edu	36	16	31279175	31279175	+	Missense_Mutation	SNP	G	G	A	rs2230428	byCluster;byFrequency;byHapMap	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADCY7	113	hgsc.bcm.edu	36	16	48892577	48892577	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NUP93	9688	hgsc.bcm.edu	36	16	55425576	55425576	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NLRC5	84166	hgsc.bcm.edu	36	16	55618342	55618342	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TEPP	374739	hgsc.bcm.edu	36	16	56567995	56567995	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRSS54	0	hgsc.bcm.edu	36	16	56872088	56872088	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KCTD19	146212	hgsc.bcm.edu	36	16	65894622	65894622	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RANBP10	57610	hgsc.bcm.edu	36	16	66396902	66396902	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NOB1	28987	hgsc.bcm.edu	36	16	68336401	68336401	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HYDIN	54768	hgsc.bcm.edu	36	16	69564856	69564856	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HYDIN	54768	hgsc.bcm.edu	36	16	69566067	69566067	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZFHX3	463	hgsc.bcm.edu	36	16	71541918	71541918	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDYL2	124359	hgsc.bcm.edu	36	16	79195888	79195888	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLCG2	5336	hgsc.bcm.edu	36	16	80547843	80547843	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MBTPS1	8720	hgsc.bcm.edu	36	16	82684832	82684832	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
USP10	84669	hgsc.bcm.edu	36	16	83370160	83370160	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0182	23199	hgsc.bcm.edu	36	16	84246839	84246839	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0182	23199	hgsc.bcm.edu	36	16	84247525	84247525	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CTU2	348180	hgsc.bcm.edu	36	16	87307675	87307675	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM38A	9780	hgsc.bcm.edu	36	16	87328865	87328865	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPIRE2	84501	hgsc.bcm.edu	36	16	88454604	88454604	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EPB41L3	23136	hgsc.bcm.edu	36	18	5387141	5387141	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PTPRM	5797	hgsc.bcm.edu	36	18	7896517	7896517	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0802	23255	hgsc.bcm.edu	36	18	8788208	8788208	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PPP4R1	9989	hgsc.bcm.edu	36	18	9549585	9549585	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AFG3L2	10939	hgsc.bcm.edu	36	18	12330384	12330384	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C18orf8	29919	hgsc.bcm.edu	36	18	19364427	19364427	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LAMA3	3910	hgsc.bcm.edu	36	18	19787030	19787030	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDH2	1000	hgsc.bcm.edu	36	18	23819635	23819635	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDH2	1000	hgsc.bcm.edu	36	18	23824125	23824125	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DSC2	1825	hgsc.bcm.edu	36	18	26914144	26914144	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTR	7276	hgsc.bcm.edu	36	18	27429117	27429117	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DTNA	1837	hgsc.bcm.edu	36	18	30692350	30692350	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SETBP1	26040	hgsc.bcm.edu	36	18	40897269	40897269	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C18orf25	147339	hgsc.bcm.edu	36	18	42074087	42074087	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TCEB3B	51224	hgsc.bcm.edu	36	18	42815066	42815066	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMAD4	4089	hgsc.bcm.edu	36	18	46858688	46858688	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMAD4	4089	hgsc.bcm.edu	36	18	46858721	46858721	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TCF4	6934	hgsc.bcm.edu	36	18	51072875	51072875	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TCF4	6934	hgsc.bcm.edu	36	18	51403540	51403540	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ONECUT2	9480	hgsc.bcm.edu	36	18	53254395	53254395	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1468	57614	hgsc.bcm.edu	36	18	58098622	58098622	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TNFRSF11A	8792	hgsc.bcm.edu	36	18	58172621	58172621	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FBXO15	201456	hgsc.bcm.edu	36	18	69948861	69948861	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NFATC1	4772	hgsc.bcm.edu	36	18	75271851	75271851	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C3orf32	51066	hgsc.bcm.edu	36	3	8650541	8650541	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RPUSD3	285367	hgsc.bcm.edu	36	3	9854867	9854867	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RAF1	5894	hgsc.bcm.edu	36	3	12608234	12608234	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GRIP2	80852	hgsc.bcm.edu	36	3	14510233	14510233	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ANKRD28	23243	hgsc.bcm.edu	36	3	15782811	15782811	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RFTN1	23180	hgsc.bcm.edu	36	3	16343387	16343387	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLCL2	23228	hgsc.bcm.edu	36	3	17026453	17026453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NGLY1	55768	hgsc.bcm.edu	36	3	25753901	25753901	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CTDSPL	10217	hgsc.bcm.edu	36	3	37992235	37992235	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC22A14	9389	hgsc.bcm.edu	36	3	38329569	38329569	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ACVR2B	93	hgsc.bcm.edu	36	3	38498951	38498951	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SCN5A	6331	hgsc.bcm.edu	36	3	38566844	38566844	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDCP1	64866	hgsc.bcm.edu	36	3	45107853	45107853	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CELSR3	1951	hgsc.bcm.edu	36	3	48657523	48657523	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WDR6	11180	hgsc.bcm.edu	36	3	49026652	49026652	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
USP19	10869	hgsc.bcm.edu	36	3	49126432	49126432	+	Silent	SNP	C	C	T	rs58998762	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CACNA2D2	9254	hgsc.bcm.edu	36	3	50391967	50391967	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GRM2	2912	hgsc.bcm.edu	36	3	51724317	51724317	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ACY1	95	hgsc.bcm.edu	36	3	51997878	51997878	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RFT1	91869	hgsc.bcm.edu	36	3	53128969	53128969	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM116A	201627	hgsc.bcm.edu	36	3	57591482	57591482	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
THOC7	80145	hgsc.bcm.edu	36	3	63798697	63798697	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MITF	4286	hgsc.bcm.edu	36	3	70091152	70091152	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CNTN3	5067	hgsc.bcm.edu	36	3	74496315	74496315	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NSUN3	63899	hgsc.bcm.edu	36	3	95285845	95285845	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
POLQ	51426	hgsc.bcm.edu	36	3	122633876	122633876	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GOLGB1	2804	hgsc.bcm.edu	36	3	122898328	122898328	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KALRN	8997	hgsc.bcm.edu	36	3	125466118	125466118	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CCDC37	348807	hgsc.bcm.edu	36	3	127621745	127621745	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RUVBL1	8607	hgsc.bcm.edu	36	3	129302138	129302138	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GATA2	2624	hgsc.bcm.edu	36	3	129687500	129687500	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLXND1	23129	hgsc.bcm.edu	36	3	130774150	130774150	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLXND1	23129	hgsc.bcm.edu	36	3	130775991	130775991	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLXND1	23129	hgsc.bcm.edu	36	3	130790920	130790920	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AMOTL2	51421	hgsc.bcm.edu	36	3	135561829	135561829	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARHGEF26	0	hgsc.bcm.edu	36	3	155323192	155323192	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KCNAB1	7881	hgsc.bcm.edu	36	3	157321308	157321308	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GHSR	2693	hgsc.bcm.edu	36	3	173645782	173645782	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PIK3CA	5290	hgsc.bcm.edu	36	3	180418789	180418789	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PIK3CA	5290	hgsc.bcm.edu	36	3	180434651	180434651	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PIK3CA	5290	hgsc.bcm.edu	36	3	180434778	180434778	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATP11B	23200	hgsc.bcm.edu	36	3	184114395	184114395	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ABCF3	55324	hgsc.bcm.edu	36	3	185388667	185388667	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EIF4G1	1981	hgsc.bcm.edu	36	3	185523891	185523891	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAP3K13	9175	hgsc.bcm.edu	36	3	186673587	186673587	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KCNA6	3742	hgsc.bcm.edu	36	12	4789955	4789955	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PTPN6	5777	hgsc.bcm.edu	36	12	6939585	6939585	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TAS2R10	50839	hgsc.bcm.edu	36	12	10869240	10869240	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DUSP16	80824	hgsc.bcm.edu	36	12	12521585	12521585	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DDX47	51202	hgsc.bcm.edu	36	12	12873751	12873751	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ABCC9	10060	hgsc.bcm.edu	36	12	21892401	21892401	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BCAT1	586	hgsc.bcm.edu	36	12	24874053	24874053	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KRAS	3845	hgsc.bcm.edu	36	12	25269829	25269829	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARNTL2	56938	hgsc.bcm.edu	36	12	27447639	27447639	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DENND5B	160518	hgsc.bcm.edu	36	12	31524273	31524273	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
YARS2	51067	hgsc.bcm.edu	36	12	32794191	32794191	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADCY6	112	hgsc.bcm.edu	36	12	47455441	47455441	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MFSD5	84975	hgsc.bcm.edu	36	12	51933790	51933790	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAP3K12	7786	hgsc.bcm.edu	36	12	52162944	52162944	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GPR84	53831	hgsc.bcm.edu	36	12	53043854	53043854	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SILV	6490	hgsc.bcm.edu	36	12	54634326	54634326	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ERBB3	2065	hgsc.bcm.edu	36	12	54774239	54774239	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZC3H10	84872	hgsc.bcm.edu	36	12	54800828	54800828	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GPR182	11318	hgsc.bcm.edu	36	12	55675553	55675553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
STAC3	246329	hgsc.bcm.edu	36	12	55929311	55929311	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MARS	4141	hgsc.bcm.edu	36	12	56180553	56180553	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DCTN2	10540	hgsc.bcm.edu	36	12	56214414	56214414	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CTDSP2	10106	hgsc.bcm.edu	36	12	56504129	56504129	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EEA1	8411	hgsc.bcm.edu	36	12	91697091	91697091	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NEDD1	121441	hgsc.bcm.edu	36	12	95854559	95854559	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MYBPC1	4604	hgsc.bcm.edu	36	12	100588266	100588266	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IGF1	3479	hgsc.bcm.edu	36	12	101393638	101393638	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WSCD2	9671	hgsc.bcm.edu	36	12	107166220	107166220	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SSH1	54434	hgsc.bcm.edu	36	12	107735027	107735027	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MVK	4598	hgsc.bcm.edu	36	12	108517336	108517336	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C12orf51	283450	hgsc.bcm.edu	36	12	111085286	111085286	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OAS3	4940	hgsc.bcm.edu	36	12	111872981	111872981	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MED13L	23389	hgsc.bcm.edu	36	12	114942015	114942015	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ANKLE2	23141	hgsc.bcm.edu	36	12	131834583	131834583	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAGEL2	54551	hgsc.bcm.edu	36	15	21441738	21441738	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RTF1	23168	hgsc.bcm.edu	36	15	39517864	39517864	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TYRO3	7301	hgsc.bcm.edu	36	15	39653174	39653174	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLA2G4D	283748	hgsc.bcm.edu	36	15	40148422	40148422	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TGM7	116179	hgsc.bcm.edu	36	15	41373025	41373025	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ELL3	80237	hgsc.bcm.edu	36	15	41852689	41852689	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPG11	80208	hgsc.bcm.edu	36	15	42648969	42648969	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DUOX1	53905	hgsc.bcm.edu	36	15	43231997	43231997	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC28A2	9153	hgsc.bcm.edu	36	15	43344213	43344213	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FBN1	2200	hgsc.bcm.edu	36	15	46575064	46575064	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CEP152	22995	hgsc.bcm.edu	36	15	46824455	46824455	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CGNL1	84952	hgsc.bcm.edu	36	15	55518327	55518327	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LDHAL6B	92483	hgsc.bcm.edu	36	15	57286456	57286456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DAPK2	23604	hgsc.bcm.edu	36	15	62050791	62050791	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPG21	51324	hgsc.bcm.edu	36	15	63060307	63060307	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RAB11A	8766	hgsc.bcm.edu	36	15	63956897	63956897	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TIPIN	54962	hgsc.bcm.edu	36	15	64428798	64428798	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SCAMP2	10066	hgsc.bcm.edu	36	15	72931464	72931464	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C15orf39	56905	hgsc.bcm.edu	36	15	73286762	73286762	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SCAPER	49855	hgsc.bcm.edu	36	15	74921292	74921292	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WDR61	80349	hgsc.bcm.edu	36	15	76367773	76367773	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RASGRF1	5923	hgsc.bcm.edu	36	15	77126255	77126255	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1024	23251	hgsc.bcm.edu	36	15	77535659	77535659	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MEX3B	84206	hgsc.bcm.edu	36	15	80123370	80123370	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ALPK3	57538	hgsc.bcm.edu	36	15	83202125	83202125	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ACAN	176	hgsc.bcm.edu	36	15	87216306	87216306	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HAPLN3	145864	hgsc.bcm.edu	36	15	87225657	87225657	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ABHD2	11057	hgsc.bcm.edu	36	15	87520205	87520205	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CRTC3	64784	hgsc.bcm.edu	36	15	88986329	88986329	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLCO3A1	28232	hgsc.bcm.edu	36	15	90448694	90448694	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLCO3A1	28232	hgsc.bcm.edu	36	15	90507219	90507219	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CHSY1	22856	hgsc.bcm.edu	36	15	99536549	99536549	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
STS	412	hgsc.bcm.edu	36	X	7278151	7278151	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAP3K15	389840	hgsc.bcm.edu	36	X	19299034	19299034	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM47A	158724	hgsc.bcm.edu	36	X	34058910	34058910	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SRPX	8406	hgsc.bcm.edu	36	X	37916096	37916096	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATRX	546	hgsc.bcm.edu	36	X	76663555	76663555	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
P2RY10	27334	hgsc.bcm.edu	36	X	78103604	78103604	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ITM2A	9452	hgsc.bcm.edu	36	X	78505198	78505198	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAGEA10	4109	hgsc.bcm.edu	36	X	151054543	151054543	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLXNA3	55558	hgsc.bcm.edu	36	X	153341968	153341968	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLXNA3	55558	hgsc.bcm.edu	36	X	153343035	153343035	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZFYVE28	57732	hgsc.bcm.edu	36	4	2276413	2276413	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADD1	118	hgsc.bcm.edu	36	4	2899940	2899940	+	Silent	SNP	C	C	T	rs34737322	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HGFAC	3083	hgsc.bcm.edu	36	4	3419077	3419077	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OTOP1	133060	hgsc.bcm.edu	36	4	4265607	4265607	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0232	9778	hgsc.bcm.edu	36	4	6913740	6913740	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SH3TC1	54436	hgsc.bcm.edu	36	4	8275491	8275491	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CORIN	10699	hgsc.bcm.edu	36	4	47320440	47320440	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIT	3815	hgsc.bcm.edu	36	4	55288422	55288422	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NMU	10874	hgsc.bcm.edu	36	4	56160100	56160100	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EXOC1	55763	hgsc.bcm.edu	36	4	56444768	56444768	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EPHA5	2044	hgsc.bcm.edu	36	4	65896467	65896467	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NPFFR2	10886	hgsc.bcm.edu	36	4	73116508	73116508	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ANKRD17	26057	hgsc.bcm.edu	36	4	74233423	74233423	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMSL3	7117	hgsc.bcm.edu	36	4	91979164	91979164	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADH1B	125	hgsc.bcm.edu	36	4	100454249	100454249	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DDIT4L	115265	hgsc.bcm.edu	36	4	101328145	101328145	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ALPK1	80216	hgsc.bcm.edu	36	4	113518468	113518468	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAML3	55534	hgsc.bcm.edu	36	4	141030564	141030564	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DCHS2	54798	hgsc.bcm.edu	36	4	155630565	155630565	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FGG	2266	hgsc.bcm.edu	36	4	155750268	155750268	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FNIP2	57600	hgsc.bcm.edu	36	4	160009327	160009327	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PXDN	7837	hgsc.bcm.edu	36	2	1631222	1631222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TSSC1	7260	hgsc.bcm.edu	36	2	3320862	3320862	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WDR35	57539	hgsc.bcm.edu	36	2	20037823	20037823	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADCY3	114	hgsc.bcm.edu	36	2	24911307	24911307	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
POMC	5443	hgsc.bcm.edu	36	2	25237490	25237490	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAPRE3	22924	hgsc.bcm.edu	36	2	27102020	27102020	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AGBL5	60509	hgsc.bcm.edu	36	2	27131118	27131118	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NRBP1	29959	hgsc.bcm.edu	36	2	27510107	27510107	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC4A1AP	22950	hgsc.bcm.edu	36	2	27740770	27740770	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BRE	9577	hgsc.bcm.edu	36	2	28317703	28317703	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLB1	151056	hgsc.bcm.edu	36	2	28615535	28615535	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
XDH	7498	hgsc.bcm.edu	36	2	31444398	31444398	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BIRC6	57448	hgsc.bcm.edu	36	2	32520743	32520743	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HEATR5B	54497	hgsc.bcm.edu	36	2	37101405	37101405	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTC7A	57217	hgsc.bcm.edu	36	2	47055655	47055655	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CCDC88A	55704	hgsc.bcm.edu	36	2	55403248	55403248	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PROKR1	10887	hgsc.bcm.edu	36	2	68726761	68726761	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PROKR1	10887	hgsc.bcm.edu	36	2	68726833	68726833	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ALMS1	7840	hgsc.bcm.edu	36	2	73533327	73533327	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TET3	200424	hgsc.bcm.edu	36	2	74128710	74128710	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MOGS	7841	hgsc.bcm.edu	36	2	74542820	74542820	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TLX2	3196	hgsc.bcm.edu	36	2	74595519	74595519	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CTNNA2	1496	hgsc.bcm.edu	36	2	79938755	79938755	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FER1L5	90342	hgsc.bcm.edu	36	2	96734024	96734024	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LMAN2L	81562	hgsc.bcm.edu	36	2	96741328	96741328	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NCK2	8440	hgsc.bcm.edu	36	2	105875963	105875963	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SH3RF3	344558	hgsc.bcm.edu	36	2	109432233	109432233	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DDX18	8886	hgsc.bcm.edu	36	2	118293698	118293698	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TSN	7247	hgsc.bcm.edu	36	2	122239388	122239388	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CNTNAP5	129684	hgsc.bcm.edu	36	2	125388238	125388238	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARHGEF4	50649	hgsc.bcm.edu	36	2	131515491	131515491	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMEM163	81615	hgsc.bcm.edu	36	2	135024656	135024656	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EPC2	26122	hgsc.bcm.edu	36	2	149255759	149255759	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
STAM2	10254	hgsc.bcm.edu	36	2	152708678	152708678	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PLA2R1	22925	hgsc.bcm.edu	36	2	160521334	160521334	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TBR1	10716	hgsc.bcm.edu	36	2	161984998	161984998	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTC30A	92104	hgsc.bcm.edu	36	2	178191010	178191010	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTN	7273	hgsc.bcm.edu	36	2	179137956	179137956	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTN	7273	hgsc.bcm.edu	36	2	179162437	179162437	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTN	7273	hgsc.bcm.edu	36	2	179183181	179183181	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTN	7273	hgsc.bcm.edu	36	2	179251119	179251119	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTN	7273	hgsc.bcm.edu	36	2	179285124	179285124	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTN	7273	hgsc.bcm.edu	36	2	179344437	179344437	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMEFF2	23671	hgsc.bcm.edu	36	2	192523301	192523301	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DNAH7	56171	hgsc.bcm.edu	36	2	196431572	196431572	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CPS1	1589	hgsc.bcm.edu	36	2	211249993	211249993	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IHH	3549	hgsc.bcm.edu	36	2	219630473	219630473	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C2orf24	27013	hgsc.bcm.edu	36	2	219747786	219747786	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPEG	10290	hgsc.bcm.edu	36	2	220035011	220035011	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EPHA4	2043	hgsc.bcm.edu	36	2	222055524	222055524	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1486	57624	hgsc.bcm.edu	36	2	226155345	226155345	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
COL4A4	1286	hgsc.bcm.edu	36	2	227632384	227632384	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
COL4A4	1286	hgsc.bcm.edu	36	2	227671729	227671729	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DIS3L2	129563	hgsc.bcm.edu	36	2	232907645	232907645	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NDUFA10	4705	hgsc.bcm.edu	36	2	240602843	240602843	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C2orf54	79919	hgsc.bcm.edu	36	2	241479705	241479705	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ANO7	50636	hgsc.bcm.edu	36	2	241778250	241778250	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
JAK2	3717	hgsc.bcm.edu	36	9	5040714	5040714	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GLDC	2731	hgsc.bcm.edu	36	9	6600217	6600217	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MPDZ	84708	hgsc.bcm.edu	36	9	13178864	13178864	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MLLT3	4300	hgsc.bcm.edu	36	9	20404304	20404304	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1539	80256	hgsc.bcm.edu	36	9	35096860	35096860	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RUSC2	9853	hgsc.bcm.edu	36	9	35538047	35538047	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TESK1	7016	hgsc.bcm.edu	36	9	35599691	35599691	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CCDC107	203260	hgsc.bcm.edu	36	9	35650866	35650866	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C9orf128	392307	hgsc.bcm.edu	36	9	35809293	35809293	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMC5	23137	hgsc.bcm.edu	36	9	72154902	72154902	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM75D1	0	hgsc.bcm.edu	36	9	83799650	83799650	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NAA35	0	hgsc.bcm.edu	36	9	87822246	87822246	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WNK2	65268	hgsc.bcm.edu	36	9	95031963	95031963	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RNF20	56254	hgsc.bcm.edu	36	9	103364014	103364014	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NIPSNAP3B	55335	hgsc.bcm.edu	36	9	106575102	106575102	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C9orf84	158401	hgsc.bcm.edu	36	9	113529794	113529794	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SNX30	401548	hgsc.bcm.edu	36	9	114632930	114632930	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ENG	2022	hgsc.bcm.edu	36	9	129622056	129622056	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
COQ4	51117	hgsc.bcm.edu	36	9	130127338	130127338	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CERCAM	51148	hgsc.bcm.edu	36	9	130237802	130237802	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SET	6418	hgsc.bcm.edu	36	9	130494016	130494016	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SET	6418	hgsc.bcm.edu	36	9	130495778	130495778	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LRRC8A	56262	hgsc.bcm.edu	36	9	130710638	130710638	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ABL1	25	hgsc.bcm.edu	36	9	132750195	132750195	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TSC1	7248	hgsc.bcm.edu	36	9	134761617	134761617	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SURF4	6836	hgsc.bcm.edu	36	9	135223365	135223365	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OLFM1	10439	hgsc.bcm.edu	36	9	137151664	137151664	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SNAPC4	6621	hgsc.bcm.edu	36	9	138397768	138397768	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FBXW5	54461	hgsc.bcm.edu	36	9	138956394	138956394	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PNPLA7	375775	hgsc.bcm.edu	36	9	139515080	139515080	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CACNA1B	774	hgsc.bcm.edu	36	9	140132956	140132956	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDK8	1024	hgsc.bcm.edu	36	13	25857365	25857365	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HMGB1	3146	hgsc.bcm.edu	36	13	29934768	29934768	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FRY	10129	hgsc.bcm.edu	36	13	31721711	31721711	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SOHLH2	54937	hgsc.bcm.edu	36	13	35642859	35642859	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EPSTI1	94240	hgsc.bcm.edu	36	13	42391453	42391453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RCBTB2	1102	hgsc.bcm.edu	36	13	47975028	47975028	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CLDN10	9071	hgsc.bcm.edu	36	13	94884128	94884128	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DZIP1	22873	hgsc.bcm.edu	36	13	95035103	95035103	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FGF14	2259	hgsc.bcm.edu	36	13	101851878	101851878	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RBM17	84991	hgsc.bcm.edu	36	10	6179046	6179046	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DNAJC1	64215	hgsc.bcm.edu	36	10	22134958	22134958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DNA2	1763	hgsc.bcm.edu	36	10	69862165	69862165	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TSPAN15	23555	hgsc.bcm.edu	36	10	70935999	70935999	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
UNC5B	219699	hgsc.bcm.edu	36	10	72717368	72717368	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PTEN	5728	hgsc.bcm.edu	36	10	89682771	89682771	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GPR120	338557	hgsc.bcm.edu	36	10	95337170	95337170	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RRP12	23223	hgsc.bcm.edu	36	10	99120016	99120016	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LZTS2	84445	hgsc.bcm.edu	36	10	102752403	102752403	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LZTS2	84445	hgsc.bcm.edu	36	10	102752495	102752495	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C10orf76	79591	hgsc.bcm.edu	36	10	103741739	103741739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PPRC1	23082	hgsc.bcm.edu	36	10	103890386	103890386	+	Missense_Mutation	SNP	G	G	A	rs17847386	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NOLC1	9221	hgsc.bcm.edu	36	10	103908998	103908998	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ELOVL3	83401	hgsc.bcm.edu	36	10	103976376	103976376	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SFXN2	118980	hgsc.bcm.edu	36	10	104481907	104481907	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CALHM2	51063	hgsc.bcm.edu	36	10	105199660	105199660	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CALHM1	255022	hgsc.bcm.edu	36	10	105208338	105208338	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NHLRC2	374354	hgsc.bcm.edu	36	10	115654677	115654677	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM160B1	57700	hgsc.bcm.edu	36	10	116596423	116596423	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PNLIP	5406	hgsc.bcm.edu	36	10	118308709	118308709	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EIF3A	8661	hgsc.bcm.edu	36	10	120791841	120791841	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DMBT1	1755	hgsc.bcm.edu	36	10	124389563	124389563	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C10orf90	118611	hgsc.bcm.edu	36	10	128183323	128183323	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DOCK1	1793	hgsc.bcm.edu	36	10	129121573	129121573	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CMBL	134147	hgsc.bcm.edu	36	5	10339472	10339472	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TRIO	7204	hgsc.bcm.edu	36	5	14340023	14340023	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM134B	54463	hgsc.bcm.edu	36	5	16531972	16531972	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C5orf23	79614	hgsc.bcm.edu	36	5	32825621	32825621	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SEPP1	6414	hgsc.bcm.edu	36	5	42844032	42844032	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IL6ST	3572	hgsc.bcm.edu	36	5	55273012	55273012	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GPBP1	65056	hgsc.bcm.edu	36	5	56582700	56582700	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZSWIM6	57688	hgsc.bcm.edu	36	5	60664203	60664203	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZSWIM6	57688	hgsc.bcm.edu	36	5	60804532	60804532	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BTF3	10384	hgsc.bcm.edu	36	5	72834110	72834110	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
JMY	133746	hgsc.bcm.edu	36	5	78631744	78631744	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GPR98	84059	hgsc.bcm.edu	36	5	90142088	90142088	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAN2A1	4124	hgsc.bcm.edu	36	5	109218823	109218823	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
APC	324	hgsc.bcm.edu	36	5	112202424	112202424	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
APC	324	hgsc.bcm.edu	36	5	112203812	112203812	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AFF4	27125	hgsc.bcm.edu	36	5	132297982	132297982	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TXNDC15	79770	hgsc.bcm.edu	36	5	134257231	134257231	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMCO6	55374	hgsc.bcm.edu	36	5	140003567	140003567	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCDHA3	56145	hgsc.bcm.edu	36	5	140163073	140163073	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCDHA10	56139	hgsc.bcm.edu	36	5	140217135	140217135	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCDHB4	56131	hgsc.bcm.edu	36	5	140483102	140483102	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCDHGA2	56113	hgsc.bcm.edu	36	5	140699491	140699491	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCDHGA7	56108	hgsc.bcm.edu	36	5	140743451	140743451	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCDHGB7	56099	hgsc.bcm.edu	36	5	140779273	140779273	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
POU4F3	5459	hgsc.bcm.edu	36	5	145699597	145699597	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TCOF1	6949	hgsc.bcm.edu	36	5	149728628	149728628	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CCDC69	26112	hgsc.bcm.edu	36	5	150543244	150543244	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAT2	2196	hgsc.bcm.edu	36	5	150902699	150902699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GLRA1	2741	hgsc.bcm.edu	36	5	151182652	151182652	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GEMIN5	25929	hgsc.bcm.edu	36	5	154251401	154251401	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GEMIN5	25929	hgsc.bcm.edu	36	5	154267468	154267468	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CLK4	57396	hgsc.bcm.edu	36	5	177978331	177978331	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MGAT1	116255	hgsc.bcm.edu	36	5	180151412	180151412	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR2V2	285659	hgsc.bcm.edu	36	5	180514584	180514584	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MYH9	4627	hgsc.bcm.edu	36	22	35031920	35031920	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LMF2	91289	hgsc.bcm.edu	36	22	49290522	49290522	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MATN2	4147	hgsc.bcm.edu	36	8	99088632	99088632	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FOLH1	2346	hgsc.bcm.edu	36	11	49147387	49147387	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
B3GAT3	26229	hgsc.bcm.edu	36	11	62140552	62140552	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MCM3AP	8888	hgsc.bcm.edu	36	21	46503280	46503280	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IL4R	3566	hgsc.bcm.edu	36	16	27259008	27259008	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ITGA5	3678	hgsc.bcm.edu	36	12	53082145	53082145	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PIWIL1	9271	hgsc.bcm.edu	36	12	129393168	129393168	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CASC4	113201	hgsc.bcm.edu	36	15	42460295	42460295	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RBM44	375316	hgsc.bcm.edu	36	2	238394637	238394637	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PDCD11	22984	hgsc.bcm.edu	36	10	105167537	105167537	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AGRN	375790	hgsc.bcm.edu	36	1	971723	971724	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDK11B	0	hgsc.bcm.edu	36	1	1637753	1637754	+	In_Frame_Ins	INS	-	-	TTTCTT	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MFN2	9927	hgsc.bcm.edu	36	1	11975323	11975323	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRDM2	7799	hgsc.bcm.edu	36	1	13981336	13981336	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EPHA2	1969	hgsc.bcm.edu	36	1	16334151	16334151	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MATN1	4146	hgsc.bcm.edu	36	1	30968901	30968901	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZMYM4	9202	hgsc.bcm.edu	36	1	35619547	35619547	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAST2	23139	hgsc.bcm.edu	36	1	46267146	46267146	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C1orf168	199920	hgsc.bcm.edu	36	1	56964787	56964787	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C1orf168	199920	hgsc.bcm.edu	36	1	57006102	57006103	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SGIP1	84251	hgsc.bcm.edu	36	1	66920599	66920599	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPAG17	200162	hgsc.bcm.edu	36	1	118340844	118340845	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HIST2H2AB	317772	hgsc.bcm.edu	36	1	148125867	148125869	+	In_Frame_Del	DEL	TTG	TTG	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	TTG	TTG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RFX5	5993	hgsc.bcm.edu	36	1	149585365	149585365	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATP8B2	57198	hgsc.bcm.edu	36	1	152582565	152582566	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SHC1	6464	hgsc.bcm.edu	36	1	153205513	153205514	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TRIM46	80128	hgsc.bcm.edu	36	1	153418803	153418803	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
POU2F1	5451	hgsc.bcm.edu	36	1	165635204	165635204	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADCY10	55811	hgsc.bcm.edu	36	1	166045581	166045582	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIFAP3	22920	hgsc.bcm.edu	36	1	168271229	168271229	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TPR	7175	hgsc.bcm.edu	36	1	184558153	184558153	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TPR	7175	hgsc.bcm.edu	36	1	184559490	184559490	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF281	23528	hgsc.bcm.edu	36	1	198645181	198645182	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FMN2	56776	hgsc.bcm.edu	36	1	238438024	238438024	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KCNS3	3790	hgsc.bcm.edu	36	2	17976011	17976011	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MSH2	4436	hgsc.bcm.edu	36	2	47547340	47547341	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	CA	CA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RTN4	57142	hgsc.bcm.edu	36	2	55106732	55106732	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DCTN1	1639	hgsc.bcm.edu	36	2	74452191	74452191	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ACVR2A	92	hgsc.bcm.edu	36	2	148400156	148400156	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MBD5	55777	hgsc.bcm.edu	36	2	148963949	148963950	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944294	+	In_Frame_Del	DEL	AAA	AAA	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	AAA	AAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ABCB11	8647	hgsc.bcm.edu	36	2	169488467	169488467	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TTN	7273	hgsc.bcm.edu	36	2	179121887	179121887	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SGOL2	151246	hgsc.bcm.edu	36	2	201145237	201145237	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BZW1	9689	hgsc.bcm.edu	36	2	201388348	201388348	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CASP8	841	hgsc.bcm.edu	36	2	201859535	201859535	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC11A1	6556	hgsc.bcm.edu	36	2	218960551	218960551	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC4A3	6508	hgsc.bcm.edu	36	2	220202354	220202355	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SP100	6672	hgsc.bcm.edu	36	2	231088233	231088234	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DNAJB3	414061	hgsc.bcm.edu	36	2	234316927	234316927	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIF1A	547	hgsc.bcm.edu	36	2	241313396	241313397	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MTMR14	64419	hgsc.bcm.edu	36	3	9718569	9718569	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OXSM	54995	hgsc.bcm.edu	36	3	25808047	25808047	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MLH1	4292	hgsc.bcm.edu	36	3	37034066	37034066	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ANO10	55129	hgsc.bcm.edu	36	3	43622217	43622217	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PTPN23	25930	hgsc.bcm.edu	36	3	47427279	47427279	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TKT	7086	hgsc.bcm.edu	36	3	53251216	53251216	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FLNB	2317	hgsc.bcm.edu	36	3	58131479	58131480	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ROBO2	6092	hgsc.bcm.edu	36	3	77739728	77739728	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR5K4	403278	hgsc.bcm.edu	36	3	99556282	99556282	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GOLGB1	2804	hgsc.bcm.edu	36	3	122899853	122899853	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PARP14	54625	hgsc.bcm.edu	36	3	123915922	123915922	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GYG1	2992	hgsc.bcm.edu	36	3	150224605	150224606	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VEPH1	79674	hgsc.bcm.edu	36	3	158563921	158563921	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRKCI	5584	hgsc.bcm.edu	36	3	171480821	171480822	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
USP13	8975	hgsc.bcm.edu	36	3	180955305	180955305	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EHHADH	1962	hgsc.bcm.edu	36	3	186393663	186393663	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EIF4A2	1974	hgsc.bcm.edu	36	3	187985160	187985162	+	In_Frame_Del	DEL	TAT	TAT	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	TAT	TAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
UTS2D	257313	hgsc.bcm.edu	36	3	192478627	192478627	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MUC20	200958	hgsc.bcm.edu	36	3	196937724	196937725	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MUC4	4585	hgsc.bcm.edu	36	3	196991839	196991886	+	In_Frame_Del	DEL	GTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGC	GTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGC	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	GTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGC	GTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MUC4	4585	hgsc.bcm.edu	36	3	196995882	196995929	+	In_Frame_Del	DEL	GAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAT	GAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAT	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	GAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAT	GAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SH3TC1	54436	hgsc.bcm.edu	36	4	8280585	8280585	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BOD1L	259282	hgsc.bcm.edu	36	4	13225144	13225145	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TLR10	81793	hgsc.bcm.edu	36	4	38451351	38451351	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DCUN1D4	23142	hgsc.bcm.edu	36	4	52460207	52460207	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDKL2	8999	hgsc.bcm.edu	36	4	76758604	76758604	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPARCL1	8404	hgsc.bcm.edu	36	4	88639731	88639731	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ANK2	287	hgsc.bcm.edu	36	4	114483704	114483705	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1109	84162	hgsc.bcm.edu	36	4	123500201	123500201	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CLGN	4312	hgsc.bcm.edu	36	4	141532952	141532952	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
STOX2	56977	hgsc.bcm.edu	36	4	185167773	185167774	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPEF2	79925	hgsc.bcm.edu	36	5	35741651	35741652	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MOCS2	4338	hgsc.bcm.edu	36	5	52438696	52438697	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC38A9	153129	hgsc.bcm.edu	36	5	54958085	54958085	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RASA1	8831	hgsc.bcm.edu	36	5	86711327	86711327	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ARSK	153642	hgsc.bcm.edu	36	5	94948102	94948102	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCSK1	5122	hgsc.bcm.edu	36	5	95754538	95754538	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GIN1	54826	hgsc.bcm.edu	36	5	102472185	102472185	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
APC	324	hgsc.bcm.edu	36	5	112192563	112192563	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SEMA6A	57556	hgsc.bcm.edu	36	5	115810264	115810265	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TCF7	6932	hgsc.bcm.edu	36	5	133501664	133501664	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WDR55	54853	hgsc.bcm.edu	36	5	140029286	140029286	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PCDHB1	29930	hgsc.bcm.edu	36	5	140412721	140412721	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RBM27	54439	hgsc.bcm.edu	36	5	145627513	145627513	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HMMR	3161	hgsc.bcm.edu	36	5	162850004	162850004	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRPF4B	8899	hgsc.bcm.edu	36	6	3997974	3997974	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HIST1H1E	3008	hgsc.bcm.edu	36	6	26264657	26264659	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KLC4	89953	hgsc.bcm.edu	36	6	43148678	43148678	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
XPO5	57510	hgsc.bcm.edu	36	6	43635986	43635987	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
HCRTR2	131450	hgsc.bcm.edu	36	6	55147370	55147370	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CYB5R4	51167	hgsc.bcm.edu	36	6	84690950	84690950	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SEC63	11231	hgsc.bcm.edu	36	6	108321467	108321467	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC22A16	85413	hgsc.bcm.edu	36	6	110852810	110852810	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IGF2R	3482	hgsc.bcm.edu	36	6	160405478	160405478	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IGF2R	3482	hgsc.bcm.edu	36	6	160414458	160414460	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MAP3K4	4216	hgsc.bcm.edu	36	6	161389681	161389681	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ICA1	3382	hgsc.bcm.edu	36	7	8164776	8164776	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TWISTNB	221830	hgsc.bcm.edu	36	7	19704548	19704549	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AVL9	23080	hgsc.bcm.edu	36	7	32560726	32560726	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ABCB4	5244	hgsc.bcm.edu	36	7	86920270	86920270	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
AKAP9	10142	hgsc.bcm.edu	36	7	91569974	91569975	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LRRC17	10234	hgsc.bcm.edu	36	7	102372229	102372229	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DNAJC2	27000	hgsc.bcm.edu	36	7	102752228	102752228	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
THAP5	168451	hgsc.bcm.edu	36	7	107992762	107992762	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DOCK4	9732	hgsc.bcm.edu	36	7	111367508	111367509	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LMOD2	442721	hgsc.bcm.edu	36	7	123090084	123090085	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMO	54498	hgsc.bcm.edu	36	7	128639240	128639240	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF862	643641	hgsc.bcm.edu	36	7	149175757	149175758	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WDR60	55112	hgsc.bcm.edu	36	7	158387924	158387925	+	Frame_Shift_Ins	INS	-	-	AA	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RP1L1	94137	hgsc.bcm.edu	36	8	10504877	10504880	+	Frame_Shift_Del	DEL	GCCC	GCCC	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	GCCC	GCCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RP1L1	94137	hgsc.bcm.edu	36	8	10504882	10504883	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RP1L1	94137	hgsc.bcm.edu	36	8	10505081	10505083	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CYP7B1	9420	hgsc.bcm.edu	36	8	65691259	65691260	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CNGB3	54714	hgsc.bcm.edu	36	8	87714131	87714131	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1429	25962	hgsc.bcm.edu	36	8	95600739	95600739	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
UBR5	51366	hgsc.bcm.edu	36	8	103358525	103358525	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATAD2	29028	hgsc.bcm.edu	36	8	124437865	124437866	+	Frame_Shift_Del	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CYHR1	50626	hgsc.bcm.edu	36	8	145660466	145660467	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MCART1	92014	hgsc.bcm.edu	36	9	37877857	37877858	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CDK20	0	hgsc.bcm.edu	36	9	89772283	89772283	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ASPN	54829	hgsc.bcm.edu	36	9	94261770	94261770	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WNK2	65268	hgsc.bcm.edu	36	9	95061554	95061589	+	In_Frame_Del	DEL	TGCCCCCGCAACCCACACGGCCCCCTCAACCTGTGC	TGCCCCCGCAACCCACACGGCCCCCTCAACCTGTGC	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	TGCCCCCGCAACCCACACGGCCCCCTCAACCTGTGC	TGCCCCCGCAACCCACACGGCCCCCTCAACCTGTGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
COL15A1	1306	hgsc.bcm.edu	36	9	100858367	100858367	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
INVS	27130	hgsc.bcm.edu	36	9	102102755	102102756	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MRPL50	54534	hgsc.bcm.edu	36	9	103192595	103192596	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM166A	401565	hgsc.bcm.edu	36	9	139259737	139259737	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OLAH	55301	hgsc.bcm.edu	36	10	15143854	15143854	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RSU1	6251	hgsc.bcm.edu	36	10	16846463	16846463	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ST8SIA6	338596	hgsc.bcm.edu	36	10	17403327	17403327	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
WAC	51322	hgsc.bcm.edu	36	10	28937231	28937239	+	In_Frame_Del	DEL	CCTGTTTCT	CCTGTTTCT	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	CCTGTTTCT	CCTGTTTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RUFY2	55680	hgsc.bcm.edu	36	10	69826589	69826589	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZMIZ1	57178	hgsc.bcm.edu	36	10	80742452	80742452	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SH2D4B	387694	hgsc.bcm.edu	36	10	82359273	82359273	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TCF7L2	6934	hgsc.bcm.edu	36	10	114915307	114915307	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C10orf90	118611	hgsc.bcm.edu	36	10	128183310	128183310	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR52A4	390053	hgsc.bcm.edu	36	11	5098597	5098597	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PAX6	5080	hgsc.bcm.edu	36	11	31768893	31768893	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CCDC73	493860	hgsc.bcm.edu	36	11	32592527	32592527	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
OR5B12	390191	hgsc.bcm.edu	36	11	57963604	57963604	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
B3GAT3	26229	hgsc.bcm.edu	36	11	62141034	62141036	+	Frame_Shift_Del	DEL	CCT	CCT	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	CCT	CCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
INPPL1	3636	hgsc.bcm.edu	36	11	71626396	71626396	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1377	57562	hgsc.bcm.edu	36	11	101338857	101338858	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MMP8	4317	hgsc.bcm.edu	36	11	102098507	102098507	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
C11orf87	399947	hgsc.bcm.edu	36	11	108799906	108799906	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BCL9L	283149	hgsc.bcm.edu	36	11	118275246	118275246	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FGD4	121512	hgsc.bcm.edu	36	12	32620602	32620602	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GXYLT1	0	hgsc.bcm.edu	36	12	40786083	40786083	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SENP1	29843	hgsc.bcm.edu	36	12	46745163	46745163	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CEP290	80184	hgsc.bcm.edu	36	12	87048210	87048210	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MED13L	23389	hgsc.bcm.edu	36	12	114942040	114942040	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
MLXIP	22877	hgsc.bcm.edu	36	12	121186061	121186062	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
VPS33A	65082	hgsc.bcm.edu	36	12	121314122	121314122	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PDS5B	23047	hgsc.bcm.edu	36	13	32242580	32242580	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EBPL	84650	hgsc.bcm.edu	36	13	49133210	49133210	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BAZ1A	11177	hgsc.bcm.edu	36	14	34322143	34322143	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PPP2R5E	5529	hgsc.bcm.edu	36	14	62933136	62933136	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMEM229B	0	hgsc.bcm.edu	36	14	67010012	67010012	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SIPA1L1	26037	hgsc.bcm.edu	36	14	71124508	71124508	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NIPA2	81614	hgsc.bcm.edu	36	15	20572678	20572679	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SPATA5L1	79029	hgsc.bcm.edu	36	15	43498132	43498133	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ODF3L1	161753	hgsc.bcm.edu	36	15	73806616	73806616	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA1024	23251	hgsc.bcm.edu	36	15	77537641	77537641	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RAB40C	57799	hgsc.bcm.edu	36	16	617580	617581	+	Frame_Shift_Ins	INS	-	-	CC	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
NDUFB10	4716	hgsc.bcm.edu	36	16	1951239	1951241	+	In_Frame_Del	DEL	AGG	AGG	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	AGG	AGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CACNG3	10368	hgsc.bcm.edu	36	16	24280245	24280245	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
PRRT2	112476	hgsc.bcm.edu	36	16	29732516	29732517	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZNF646	9726	hgsc.bcm.edu	36	16	30996732	30996732	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CIRH1A	84916	hgsc.bcm.edu	36	16	67760318	67760318	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DHX38	9785	hgsc.bcm.edu	36	16	70695957	70695958	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZCCHC14	23174	hgsc.bcm.edu	36	16	86024263	86024263	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ZFPM1	161882	hgsc.bcm.edu	36	16	87125934	87125935	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TCF25	22980	hgsc.bcm.edu	36	16	88478521	88478521	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KIAA0100	9703	hgsc.bcm.edu	36	17	23991105	23991106	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
KRTAP4-5	85289	hgsc.bcm.edu	36	17	36559326	36559340	+	In_Frame_Del	DEL	TGGATTCACAGCAAT	TGGATTCACAGCAAT	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	TGGATTCACAGCAAT	TGGATTCACAGCAAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
STAT5B	6777	hgsc.bcm.edu	36	17	37623762	37623762	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
XYLT2	64132	hgsc.bcm.edu	36	17	45788966	45788966	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
CCDC47	57003	hgsc.bcm.edu	36	17	59195856	59195857	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SOX9	6662	hgsc.bcm.edu	36	17	67631505	67631505	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
GAA	2548	hgsc.bcm.edu	36	17	75693231	75693232	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SERPINB5	5268	hgsc.bcm.edu	36	18	59317430	59317430	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
FAM69C	0	hgsc.bcm.edu	36	18	70264985	70264985	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SAFB2	9667	hgsc.bcm.edu	36	19	5538282	5538282	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SMARCA4	6597	hgsc.bcm.edu	36	19	10959540	10959540	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ELAVL3	1995	hgsc.bcm.edu	36	19	11438604	11438605	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
BAX	581	hgsc.bcm.edu	36	19	54150783	54150783	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TRPM4	54795	hgsc.bcm.edu	36	19	54363084	54363084	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
LENG9	94059	hgsc.bcm.edu	36	19	59665117	59665118	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
SLC4A11	83959	hgsc.bcm.edu	36	20	3163424	3163425	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RIN2	54453	hgsc.bcm.edu	36	20	19903586	19903586	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
POFUT1	23509	hgsc.bcm.edu	36	20	30268170	30268172	+	In_Frame_Del	DEL	AAC	AAC	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	AAC	AAC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ADNP	23394	hgsc.bcm.edu	36	20	48941611	48941611	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
EEF1A2	1917	hgsc.bcm.edu	36	20	61594991	61594992	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TPTE	7179	hgsc.bcm.edu	36	21	9966568	9966568	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
TMPRSS15	0	hgsc.bcm.edu	36	21	18588619	18588619	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
IGSF5	150084	hgsc.bcm.edu	36	21	40073024	40073025	+	In_Frame_Ins	INS	-	-	GCT	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
DDX17	10521	hgsc.bcm.edu	36	22	37225401	37225401	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ALG12	79087	hgsc.bcm.edu	36	22	48683550	48683550	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
RNF128	79589	hgsc.bcm.edu	36	X	105823912	105823913	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	TT	TT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
ATP2B3	492	hgsc.bcm.edu	36	X	152488357	152488358	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4746-01A-01D-1408-10	TCGA-CM-4746-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	06a4e09c-8606-408e-8e35-8ae9f2eb19d6	31a225cb-f14b-4b5b-8bed-b7c948a6edda
