Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
CYP2W1	54905	hgsc.bcm.edu	36	7	990593	990593	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KDELR2	11014	hgsc.bcm.edu	36	7	6469328	6469328	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MACC1	346389	hgsc.bcm.edu	36	7	20166164	20166164	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DNAH11	8701	hgsc.bcm.edu	36	7	21605998	21605998	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DNAH11	8701	hgsc.bcm.edu	36	7	21696923	21696923	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HOXA3	3200	hgsc.bcm.edu	36	7	27116661	27116661	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RALA	5898	hgsc.bcm.edu	36	7	39696580	39696580	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GLI3	2737	hgsc.bcm.edu	36	7	41972206	41972206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GLI3	2737	hgsc.bcm.edu	36	7	42031490	42031490	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF679	168417	hgsc.bcm.edu	36	7	63363739	63363739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MAGI2	9863	hgsc.bcm.edu	36	7	77723397	77723397	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ABCB1	5243	hgsc.bcm.edu	36	7	86982619	86982619	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF804B	219578	hgsc.bcm.edu	36	7	88802287	88802287	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C7orf63	79846	hgsc.bcm.edu	36	7	89746940	89746940	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TRRAP	8295	hgsc.bcm.edu	36	7	98430213	98430213	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TRRAP	8295	hgsc.bcm.edu	36	7	98446714	98446714	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BUD31	8896	hgsc.bcm.edu	36	7	98846658	98846658	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATP5J2	9551	hgsc.bcm.edu	36	7	98895699	98895699	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SERPINE1	5054	hgsc.bcm.edu	36	7	100560506	100560506	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TES	26136	hgsc.bcm.edu	36	7	115661887	115661887	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CAV2	858	hgsc.bcm.edu	36	7	115933270	115933270	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KCND2	3751	hgsc.bcm.edu	36	7	120169851	120169851	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SMO	54498	hgsc.bcm.edu	36	7	128638075	128638075	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
UBE2H	7328	hgsc.bcm.edu	36	7	129266360	129266360	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CLCN1	1180	hgsc.bcm.edu	36	7	142738479	142738479	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TMEM176A	55365	hgsc.bcm.edu	36	7	150130294	150130294	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HTR5A	3361	hgsc.bcm.edu	36	7	154506840	154506840	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DEFB132	400830	hgsc.bcm.edu	36	20	186438	186438	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GPCPD1	0	hgsc.bcm.edu	36	20	5476368	5476368	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HAO1	54363	hgsc.bcm.edu	36	20	7842999	7842999	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PLCG1	5335	hgsc.bcm.edu	36	20	39225852	39225852	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CBLN4	140689	hgsc.bcm.edu	36	20	54007120	54007120	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RBM38	55544	hgsc.bcm.edu	36	20	55416109	55416109	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF831	128611	hgsc.bcm.edu	36	20	57202471	57202471	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DIDO1	11083	hgsc.bcm.edu	36	20	60981126	60981126	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CCDC116	164592	hgsc.bcm.edu	36	22	20318736	20318736	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EWSR1	2130	hgsc.bcm.edu	36	22	28014653	28014653	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NF2	4771	hgsc.bcm.edu	36	22	28380656	28380656	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ISX	91464	hgsc.bcm.edu	36	22	33811587	33811587	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
APOL1	8542	hgsc.bcm.edu	36	22	34991390	34991390	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CSF2RB	1439	hgsc.bcm.edu	36	22	35659976	35659976	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EP300	2033	hgsc.bcm.edu	36	22	39843299	39843299	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EP300	2033	hgsc.bcm.edu	36	22	39899663	39899663	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ARFGAP3	26286	hgsc.bcm.edu	36	22	41543750	41543750	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
OR4L1	122742	hgsc.bcm.edu	36	14	19598334	19598334	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ADCY4	196883	hgsc.bcm.edu	36	14	23865346	23865346	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PRKD1	5587	hgsc.bcm.edu	36	14	29177748	29177748	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
LRFN5	145581	hgsc.bcm.edu	36	14	41426911	41426911	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FSCB	84075	hgsc.bcm.edu	36	14	44043617	44043617	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MDGA2	161357	hgsc.bcm.edu	36	14	46458976	46458976	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PTGDR	5729	hgsc.bcm.edu	36	14	51804674	51804674	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DLGAP5	9787	hgsc.bcm.edu	36	14	54712397	54712397	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RTN1	6252	hgsc.bcm.edu	36	14	59263980	59263980	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C14orf135	64430	hgsc.bcm.edu	36	14	59661567	59661567	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KCNH5	27133	hgsc.bcm.edu	36	14	62244875	62244875	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PCNX	22990	hgsc.bcm.edu	36	14	70514197	70514197	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TSHR	7253	hgsc.bcm.edu	36	14	80679670	80679670	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SERPINA6	866	hgsc.bcm.edu	36	14	93850271	93850271	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KIAA0284	283638	hgsc.bcm.edu	36	14	104423895	104423895	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C19orf22	91300	hgsc.bcm.edu	36	19	850495	850495	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
STK11	6794	hgsc.bcm.edu	36	19	1171435	1171435	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
STK11	6794	hgsc.bcm.edu	36	19	1177570	1177570	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EMR1	2015	hgsc.bcm.edu	36	19	6870737	6870737	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF358	140467	hgsc.bcm.edu	36	19	7491363	7491363	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SMARCA4	6597	hgsc.bcm.edu	36	19	10968052	10968052	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
OR7A5	26659	hgsc.bcm.edu	36	19	14799349	14799349	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NOTCH3	4855	hgsc.bcm.edu	36	19	15169337	15169337	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BRD4	23476	hgsc.bcm.edu	36	19	15240766	15240766	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C19orf62	29086	hgsc.bcm.edu	36	19	17245941	17245941	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
JAK3	3718	hgsc.bcm.edu	36	19	17806716	17806716	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PDE4C	5143	hgsc.bcm.edu	36	19	18188666	18188666	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF431	170959	hgsc.bcm.edu	36	19	21118211	21118211	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF429	353088	hgsc.bcm.edu	36	19	21505300	21505300	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TSHZ3	57616	hgsc.bcm.edu	36	19	36459913	36459913	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RHPN2	85415	hgsc.bcm.edu	36	19	38190785	38190785	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CEBPA	1050	hgsc.bcm.edu	36	19	38484189	38484189	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SCGBL	284402	hgsc.bcm.edu	36	19	39777020	39777020	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PSENEN	55851	hgsc.bcm.edu	36	19	40929527	40929527	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PSMD8	5714	hgsc.bcm.edu	36	19	43558672	43558672	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
LRFN1	57622	hgsc.bcm.edu	36	19	44497487	44497487	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FCGBP	8857	hgsc.bcm.edu	36	19	45100662	45100662	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NUMBL	9253	hgsc.bcm.edu	36	19	45865726	45865726	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NUMBL	9253	hgsc.bcm.edu	36	19	45865738	45865738	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CYP2B6	1555	hgsc.bcm.edu	36	19	46207843	46207843	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KCNN4	3783	hgsc.bcm.edu	36	19	48976696	48976696	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF285	26974	hgsc.bcm.edu	36	19	49582595	49582595	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KLC3	147700	hgsc.bcm.edu	36	19	50543808	50543808	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GPR4	2828	hgsc.bcm.edu	36	19	50786001	50786001	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HRC	3270	hgsc.bcm.edu	36	19	54349104	54349104	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TEAD2	8463	hgsc.bcm.edu	36	19	54554518	54554518	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PTOV1	53635	hgsc.bcm.edu	36	19	55049761	55049761	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CEACAM18	729767	hgsc.bcm.edu	36	19	56678090	56678090	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SIGLEC14	100049587	hgsc.bcm.edu	36	19	56841005	56841005	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF83	55769	hgsc.bcm.edu	36	19	57808132	57808132	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KIR2DL3	3804	hgsc.bcm.edu	36	19	59947247	59947247	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MYOM2	9172	hgsc.bcm.edu	36	8	1987758	1987758	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CSMD1	64478	hgsc.bcm.edu	36	8	2987495	2987495	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RP1L1	94137	hgsc.bcm.edu	36	8	10505358	10505358	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ADAM32	203102	hgsc.bcm.edu	36	8	39187866	39187866	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SNAI2	6591	hgsc.bcm.edu	36	8	49994100	49994100	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MOS	55034	hgsc.bcm.edu	36	8	57188729	57188729	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PLAG1	5324	hgsc.bcm.edu	36	8	57241776	57241776	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PKIA	5569	hgsc.bcm.edu	36	8	79673225	79673225	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATP6V1C1	528	hgsc.bcm.edu	36	8	104137315	104137315	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CSMD3	114788	hgsc.bcm.edu	36	8	113395848	113395848	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FER1L6	654463	hgsc.bcm.edu	36	8	125184694	125184694	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KCNK9	51305	hgsc.bcm.edu	36	8	140699945	140699945	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TAS1R1	80835	hgsc.bcm.edu	36	1	6553861	6553861	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MTOR	2475	hgsc.bcm.edu	36	1	11091948	11091948	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MTOR	2475	hgsc.bcm.edu	36	1	11198802	11198802	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FHAD1	114827	hgsc.bcm.edu	36	1	15573681	15573681	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KIF17	57576	hgsc.bcm.edu	36	1	20908856	20908856	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ECE1	1889	hgsc.bcm.edu	36	1	21457841	21457841	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EPB41	2035	hgsc.bcm.edu	36	1	29311537	29311537	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZC3H12A	80149	hgsc.bcm.edu	36	1	37721664	37721664	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PTPRF	5792	hgsc.bcm.edu	36	1	43858402	43858402	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C1orf59	113802	hgsc.bcm.edu	36	1	108994514	108994514	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CELSR2	1952	hgsc.bcm.edu	36	1	109596283	109596283	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
VANGL1	81839	hgsc.bcm.edu	36	1	116008235	116008235	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NOTCH2	4853	hgsc.bcm.edu	36	1	120260645	120260645	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
THEM5	284486	hgsc.bcm.edu	36	1	150090245	150090245	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
IVL	3713	hgsc.bcm.edu	36	1	151149424	151149424	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATP8B2	57198	hgsc.bcm.edu	36	1	152582317	152582317	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BCAN	63827	hgsc.bcm.edu	36	1	154893467	154893467	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ETV3L	440695	hgsc.bcm.edu	36	1	155335609	155335609	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FCRL4	83417	hgsc.bcm.edu	36	1	155825628	155825628	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FCGR2A	2212	hgsc.bcm.edu	36	1	159754538	159754538	+	Silent	SNP	C	C	T	rs12124551	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RXRG	6258	hgsc.bcm.edu	36	1	163645516	163645516	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RABGAP1L	9910	hgsc.bcm.edu	36	1	172456748	172456748	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TNN	63923	hgsc.bcm.edu	36	1	173315387	173315387	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TNN	63923	hgsc.bcm.edu	36	1	173362737	173362737	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KIAA0040	9674	hgsc.bcm.edu	36	1	173396556	173396556	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SEC16B	89866	hgsc.bcm.edu	36	1	176183692	176183692	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CDC73	79577	hgsc.bcm.edu	36	1	191360960	191360960	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SYT2	127833	hgsc.bcm.edu	36	1	200838172	200838172	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CENPF	1063	hgsc.bcm.edu	36	1	212882146	212882146	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
OBSCN	84033	hgsc.bcm.edu	36	1	226621408	226621408	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RYR2	6262	hgsc.bcm.edu	36	1	236013917	236013917	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FH	3949	hgsc.bcm.edu	36	1	239730381	239730381	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
AHCTF1	25909	hgsc.bcm.edu	36	1	245080990	245080990	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NLRP3	114548	hgsc.bcm.edu	36	1	245673984	245673984	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ART5	116969	hgsc.bcm.edu	36	11	3617738	3617738	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TRIM68	55128	hgsc.bcm.edu	36	11	4578597	4578597	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BBOX1	8424	hgsc.bcm.edu	36	11	27103804	27103804	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KCNA4	3739	hgsc.bcm.edu	36	11	29989392	29989392	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
OR5I1	10798	hgsc.bcm.edu	36	11	55459860	55459860	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
OR4D6	219983	hgsc.bcm.edu	36	11	58981868	58981868	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
OR4D10	390197	hgsc.bcm.edu	36	11	59001705	59001705	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DAGLA	747	hgsc.bcm.edu	36	11	61260391	61260391	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PLCB3	5331	hgsc.bcm.edu	36	11	63786535	63786535	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
INPPL1	3636	hgsc.bcm.edu	36	11	71624075	71624075	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ARAP1	116985	hgsc.bcm.edu	36	11	72086017	72086017	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MOGAT2	80168	hgsc.bcm.edu	36	11	75108754	75108754	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GAB2	9846	hgsc.bcm.edu	36	11	77638989	77638989	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ANKRD49	54851	hgsc.bcm.edu	36	11	93870898	93870898	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATM	472	hgsc.bcm.edu	36	11	107629930	107629930	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATM	472	hgsc.bcm.edu	36	11	107632176	107632176	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KDELC2	143888	hgsc.bcm.edu	36	11	107855403	107855403	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DDX10	1662	hgsc.bcm.edu	36	11	108099132	108099132	+	Silent	SNP	C	C	T	rs61996357	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MLL	4297	hgsc.bcm.edu	36	11	117877758	117877758	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CBL	867	hgsc.bcm.edu	36	11	118654090	118654090	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PUS3	83480	hgsc.bcm.edu	36	11	125270348	125270348	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GCM2	9247	hgsc.bcm.edu	36	6	10982436	10982436	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATXN1	6310	hgsc.bcm.edu	36	6	16436255	16436255	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HIST1H4I	8294	hgsc.bcm.edu	36	6	27215372	27215372	+	Silent	SNP	C	C	T	rs61742445	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TRIM15	89870	hgsc.bcm.edu	36	6	30247920	30247920	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TNF	7124	hgsc.bcm.edu	36	6	31653072	31653072	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
VARS	7407	hgsc.bcm.edu	36	6	31854753	31854753	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NOTCH4	4855	hgsc.bcm.edu	36	6	32298276	32298276	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CUTA	51596	hgsc.bcm.edu	36	6	33493931	33493931	+	Missense_Mutation	SNP	A	A	G	rs1705003	by2Hit2Allele;byCluster;byFrequency	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ITPR3	3710	hgsc.bcm.edu	36	6	33765908	33765908	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FANCE	2178	hgsc.bcm.edu	36	6	35531664	35531664	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CNPY3	10695	hgsc.bcm.edu	36	6	43013518	43013518	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DST	667	hgsc.bcm.edu	36	6	56589822	56589822	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FAM46A	55603	hgsc.bcm.edu	36	6	82518446	82518446	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PRSS35	167681	hgsc.bcm.edu	36	6	84290039	84290039	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FUT9	10690	hgsc.bcm.edu	36	6	96758385	96758385	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ASCC3	10973	hgsc.bcm.edu	36	6	101197291	101197291	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GRIK2	2901	hgsc.bcm.edu	36	6	102622980	102622980	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MAN1A1	4121	hgsc.bcm.edu	36	6	119567732	119567732	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C6orf174	387104	hgsc.bcm.edu	36	6	127838890	127838890	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SLC35D3	340146	hgsc.bcm.edu	36	6	137287257	137287257	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SYNE1	23345	hgsc.bcm.edu	36	6	152782404	152782404	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
LPA	4018	hgsc.bcm.edu	36	6	160947569	160947569	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RTN4RL1	146760	hgsc.bcm.edu	36	17	1787719	1787719	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF594	84622	hgsc.bcm.edu	36	17	5027351	5027351	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PITPNM3	83394	hgsc.bcm.edu	36	17	6299431	6299431	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NEURL4	84461	hgsc.bcm.edu	36	17	7170588	7170588	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TP53	7157	hgsc.bcm.edu	36	17	7517866	7517866	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DNAH2	146754	hgsc.bcm.edu	36	17	7630981	7630981	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NCOR1	9611	hgsc.bcm.edu	36	17	15936017	15936017	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF624	57547	hgsc.bcm.edu	36	17	16466375	16466375	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RAI1	10743	hgsc.bcm.edu	36	17	17637827	17637827	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TOP3A	7156	hgsc.bcm.edu	36	17	18118868	18118868	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SYNRG	0	hgsc.bcm.edu	36	17	32976327	32976327	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CACNB1	782	hgsc.bcm.edu	36	17	34597333	34597333	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATP6V0A1	535	hgsc.bcm.edu	36	17	37901179	37901179	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
AOC3	8639	hgsc.bcm.edu	36	17	38257342	38257342	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DCAKD	79877	hgsc.bcm.edu	36	17	40467674	40467674	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MRPL10	124995	hgsc.bcm.edu	36	17	43259416	43259416	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
WFIKKN2	124857	hgsc.bcm.edu	36	17	46272551	46272551	+	Silent	SNP	G	G	A	rs61732899	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SLC16A5	9121	hgsc.bcm.edu	36	17	70611799	70611799	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CASKIN2	57513	hgsc.bcm.edu	36	17	71009824	71009824	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DNAH17	8632	hgsc.bcm.edu	36	17	74015201	74015201	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DNAH17	8632	hgsc.bcm.edu	36	17	74034663	74034663	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BAIAP2	10458	hgsc.bcm.edu	36	17	76695210	76695210	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TPTE	7179	hgsc.bcm.edu	36	21	9963815	9963815	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TMPRSS15	0	hgsc.bcm.edu	36	21	18637752	18637752	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KRTAP26-1	388818	hgsc.bcm.edu	36	21	30613710	30613710	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DNASE1L2	1775	hgsc.bcm.edu	36	16	2227518	2227518	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZSCAN10	84891	hgsc.bcm.edu	36	16	3082123	3082123	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SRL	6345	hgsc.bcm.edu	36	16	4182678	4182678	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ALG1	56052	hgsc.bcm.edu	36	16	5072658	5072658	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PALB2	79728	hgsc.bcm.edu	36	16	23559954	23559954	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PRKCB	5579	hgsc.bcm.edu	36	16	24073640	24073640	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RBBP6	5930	hgsc.bcm.edu	36	16	24485992	24485992	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PRR14	78994	hgsc.bcm.edu	36	16	30571658	30571658	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TOX3	27324	hgsc.bcm.edu	36	16	51041851	51041851	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RPGRIP1L	23322	hgsc.bcm.edu	36	16	52283701	52283701	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CDH11	1009	hgsc.bcm.edu	36	16	63539460	63539460	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CDH1	51343	hgsc.bcm.edu	36	16	67413542	67413542	+	Missense_Mutation	SNP	G	G	A	rs33935154	byCluster;byFrequency	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KIAA0182	23199	hgsc.bcm.edu	36	16	84247605	84247605	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
JPH3	57338	hgsc.bcm.edu	36	16	86281390	86281390	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C18orf8	29919	hgsc.bcm.edu	36	18	19354206	19354206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CDH2	1000	hgsc.bcm.edu	36	18	23837114	23837114	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MAPRE2	10982	hgsc.bcm.edu	36	18	30904249	30904249	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PIK3C3	5289	hgsc.bcm.edu	36	18	37821801	37821801	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SMAD4	4089	hgsc.bcm.edu	36	18	46858788	46858788	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATP8B1	5205	hgsc.bcm.edu	36	18	53512892	53512892	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ALPK2	115701	hgsc.bcm.edu	36	18	54397447	54397447	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SRGAP3	9901	hgsc.bcm.edu	36	3	9141567	9141567	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
XPC	7508	hgsc.bcm.edu	36	3	14174972	14174972	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SUSD5	26032	hgsc.bcm.edu	36	3	33191546	33191546	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MLH1	4292	hgsc.bcm.edu	36	3	37028594	37028594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SCN11A	11280	hgsc.bcm.edu	36	3	38926642	38926642	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CTNNB1	1499	hgsc.bcm.edu	36	3	41241051	41241051	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CTNNB1	1499	hgsc.bcm.edu	36	3	41252896	41252896	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CCRL2	9034	hgsc.bcm.edu	36	3	46424640	46424640	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PTPRG	5793	hgsc.bcm.edu	36	3	62164618	62164618	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PRICKLE2	166336	hgsc.bcm.edu	36	3	64059776	64059776	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
LRIG1	26018	hgsc.bcm.edu	36	3	66516450	66516450	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MITF	4286	hgsc.bcm.edu	36	3	70096796	70096796	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GPR128	84873	hgsc.bcm.edu	36	3	101838908	101838908	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ABI3BP	25890	hgsc.bcm.edu	36	3	101972474	101972474	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CEP97	79598	hgsc.bcm.edu	36	3	102959265	102959265	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MORC1	27136	hgsc.bcm.edu	36	3	110271286	110271286	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PHLDB2	90102	hgsc.bcm.edu	36	3	113086297	113086297	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ADCY5	111	hgsc.bcm.edu	36	3	124488297	124488297	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
IFT122	55764	hgsc.bcm.edu	36	3	130697048	130697048	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
IFT122	55764	hgsc.bcm.edu	36	3	130697059	130697059	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SLCO2A1	6578	hgsc.bcm.edu	36	3	135155263	135155263	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TXNDC6	347736	hgsc.bcm.edu	36	3	139505122	139505122	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZBTB38	253461	hgsc.bcm.edu	36	3	142645874	142645874	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PLOD2	5352	hgsc.bcm.edu	36	3	147324656	147324656	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
IGSF10	285313	hgsc.bcm.edu	36	3	152647656	152647656	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GMPS	8833	hgsc.bcm.edu	36	3	157111678	157111678	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SLITRK3	22865	hgsc.bcm.edu	36	3	166388817	166388817	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PIK3CA	5290	hgsc.bcm.edu	36	3	180399345	180399345	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EHHADH	1962	hgsc.bcm.edu	36	3	186393441	186393441	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RTP1	132112	hgsc.bcm.edu	36	3	188400130	188400130	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TP63	8626	hgsc.bcm.edu	36	3	191068416	191068416	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MUC4	4585	hgsc.bcm.edu	36	3	196991525	196991525	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C3orf34	84984	hgsc.bcm.edu	36	3	197918834	197918834	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PAK2	5586	hgsc.bcm.edu	36	3	198014299	198014299	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CD163	9332	hgsc.bcm.edu	36	12	7530812	7530812	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KLRF1	51348	hgsc.bcm.edu	36	12	9871474	9871474	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
OLR1	4973	hgsc.bcm.edu	36	12	10210805	10210805	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MLL2	9757	hgsc.bcm.edu	36	12	47712621	47712621	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TARBP2	6895	hgsc.bcm.edu	36	12	52184455	52184455	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CDK2	1017	hgsc.bcm.edu	36	12	54647926	54647926	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FGD6	55785	hgsc.bcm.edu	36	12	94002493	94002493	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RBM19	9904	hgsc.bcm.edu	36	12	112868061	112868061	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HNF1A	6927	hgsc.bcm.edu	36	12	119918788	119918788	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EP400	57634	hgsc.bcm.edu	36	12	131117375	131117375	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ATP10A	57194	hgsc.bcm.edu	36	15	23577377	23577377	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FBN1	2200	hgsc.bcm.edu	36	15	46505328	46505328	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FBN1	2200	hgsc.bcm.edu	36	15	46605669	46605669	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MAPK6	5597	hgsc.bcm.edu	36	15	50126140	50126140	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GTF2A2	2958	hgsc.bcm.edu	36	15	57718646	57718646	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ARID3B	10620	hgsc.bcm.edu	36	15	72675044	72675044	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HMG20A	10363	hgsc.bcm.edu	36	15	75550438	75550438	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ARSF	416	hgsc.bcm.edu	36	X	3029221	3029221	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FRMPD4	9758	hgsc.bcm.edu	36	X	12611627	12611627	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FAM47A	158724	hgsc.bcm.edu	36	X	34059280	34059280	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
USP11	8237	hgsc.bcm.edu	36	X	46986481	46986481	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ZNF41	7592	hgsc.bcm.edu	36	X	47193167	47193167	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EBP	152503	hgsc.bcm.edu	36	X	48267264	48267264	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MAGED1	9500	hgsc.bcm.edu	36	X	51656344	51656344	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KDM5C	8242	hgsc.bcm.edu	36	X	53263171	53263171	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HUWE1	10075	hgsc.bcm.edu	36	X	53594637	53594637	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ERCC6L	54821	hgsc.bcm.edu	36	X	71342999	71342999	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RLIM	51132	hgsc.bcm.edu	36	X	73728373	73728373	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RLIM	51132	hgsc.bcm.edu	36	X	73729526	73729526	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CYSLTR1	10800	hgsc.bcm.edu	36	X	77415024	77415024	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
P2RY10	27334	hgsc.bcm.edu	36	X	78103371	78103371	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TCEAL1	9338	hgsc.bcm.edu	36	X	102771616	102771616	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PRPS1	221823	hgsc.bcm.edu	36	X	106775140	106775140	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TRPC5	7224	hgsc.bcm.edu	36	X	110977164	110977164	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SLC25A5	292	hgsc.bcm.edu	36	X	118488012	118488012	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
UPF3B	65109	hgsc.bcm.edu	36	X	118855948	118855948	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DCAF12L1	0	hgsc.bcm.edu	36	X	125513634	125513634	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MTMR1	8776	hgsc.bcm.edu	36	X	149651706	149651706	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SLC10A3	8273	hgsc.bcm.edu	36	X	153369634	153369634	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SORCS2	57537	hgsc.bcm.edu	36	4	7767810	7767810	+	Silent	SNP	C	C	T	rs28531835	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DRD5	1816	hgsc.bcm.edu	36	4	9393648	9393648	+	Silent	SNP	G	G	A	rs2227844	byFrequency	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
LNX1	84708	hgsc.bcm.edu	36	4	54039585	54039585	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KIT	3815	hgsc.bcm.edu	36	4	55288971	55288971	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KIT	3815	hgsc.bcm.edu	36	4	55299416	55299416	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NUP54	53371	hgsc.bcm.edu	36	4	77258288	77258288	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CCDC158	339965	hgsc.bcm.edu	36	4	77502320	77502320	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FAM13A	10144	hgsc.bcm.edu	36	4	89872306	89872306	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MTTP	4571	hgsc.bcm.edu	36	4	100759233	100759233	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MAP9	79884	hgsc.bcm.edu	36	4	156501004	156501004	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TLL1	7092	hgsc.bcm.edu	36	4	167144075	167144075	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KCNS3	3790	hgsc.bcm.edu	36	2	17976258	17976258	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C2orf16	84226	hgsc.bcm.edu	36	2	27658267	27658267	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BRE	9577	hgsc.bcm.edu	36	2	27970952	27970952	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ALK	238	hgsc.bcm.edu	36	2	29793949	29793949	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NLRC4	58484	hgsc.bcm.edu	36	2	32329080	32329080	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FAM98A	25940	hgsc.bcm.edu	36	2	33663516	33663516	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SLC8A1	6546	hgsc.bcm.edu	36	2	40510125	40510125	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MSH2	4436	hgsc.bcm.edu	36	2	47493188	47493188	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EFEMP1	2202	hgsc.bcm.edu	36	2	55962365	55962365	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
USP34	9736	hgsc.bcm.edu	36	2	61375887	61375887	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ADD2	119	hgsc.bcm.edu	36	2	70759469	70759469	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CLEC4F	165530	hgsc.bcm.edu	36	2	70889994	70889994	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
IMMT	10989	hgsc.bcm.edu	36	2	86254346	86254346	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
IL1RL2	8808	hgsc.bcm.edu	36	2	102184519	102184519	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SULT1C2	27233	hgsc.bcm.edu	36	2	108287559	108287559	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CKAP2L	150468	hgsc.bcm.edu	36	2	113230626	113230626	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
YSK4	80122	hgsc.bcm.edu	36	2	135455302	135455302	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ACVR1C	130399	hgsc.bcm.edu	36	2	158107608	158107608	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CSRNP3	80034	hgsc.bcm.edu	36	2	166244172	166244172	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CSRNP3	80034	hgsc.bcm.edu	36	2	166244173	166244173	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
XIRP2	129446	hgsc.bcm.edu	36	2	167809622	167809622	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ABCB11	8647	hgsc.bcm.edu	36	2	169489474	169489474	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MYO3B	140469	hgsc.bcm.edu	36	2	170764929	170764929	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MYO3B	140469	hgsc.bcm.edu	36	2	171107675	171107675	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ITGA6	3655	hgsc.bcm.edu	36	2	173064465	173064465	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TTN	7273	hgsc.bcm.edu	36	2	179182261	179182261	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NEUROD1	4760	hgsc.bcm.edu	36	2	182251716	182251716	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DUSP19	142679	hgsc.bcm.edu	36	2	183668516	183668516	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
EEF1B2	1933	hgsc.bcm.edu	36	2	206733014	206733014	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TNS1	7145	hgsc.bcm.edu	36	2	218386213	218386213	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PAX3	5077	hgsc.bcm.edu	36	2	222868569	222868569	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
WDFY1	57590	hgsc.bcm.edu	36	2	224518228	224518228	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
COL4A4	1286	hgsc.bcm.edu	36	2	227667093	227667093	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TRIP12	9320	hgsc.bcm.edu	36	2	230391453	230391453	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KIF1A	547	hgsc.bcm.edu	36	2	241307997	241307997	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NEU4	129807	hgsc.bcm.edu	36	2	242406270	242406270	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PTPRD	5789	hgsc.bcm.edu	36	9	8626827	8626827	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CDKN2A	1029	hgsc.bcm.edu	36	9	21961099	21961099	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
UBAP2	55833	hgsc.bcm.edu	36	9	33938442	33938442	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PRUNE2	158471	hgsc.bcm.edu	36	9	78511130	78511130	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ECM2	1842	hgsc.bcm.edu	36	9	94324936	94324936	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PTCH1	5727	hgsc.bcm.edu	36	9	97282574	97282574	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PTCH1	5727	hgsc.bcm.edu	36	9	97287821	97287821	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C9orf174	0	hgsc.bcm.edu	36	9	99132706	99132706	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
OR13C5	138799	hgsc.bcm.edu	36	9	106400814	106400814	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ACTL7B	10880	hgsc.bcm.edu	36	9	110657181	110657181	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NEK6	10783	hgsc.bcm.edu	36	9	126149887	126149887	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ADAMTSL2	9719	hgsc.bcm.edu	36	9	135395629	135395629	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BRCA2	675	hgsc.bcm.edu	36	13	31805143	31805143	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FREM2	341640	hgsc.bcm.edu	36	13	38255242	38255242	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
KBTBD6	89890	hgsc.bcm.edu	36	13	40603166	40603166	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RB1	5925	hgsc.bcm.edu	36	13	47834984	47834984	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RB1	5925	hgsc.bcm.edu	36	13	47839659	47839659	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RB1	5925	hgsc.bcm.edu	36	13	47851731	47851731	+	Nonsense_Mutation	SNP	C	C	T	rs3092891	byFrequency;byHapMap	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RB1	5925	hgsc.bcm.edu	36	13	47945524	47945524	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CYSLTR2	57105	hgsc.bcm.edu	36	13	48179934	48179934	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PCDH17	27253	hgsc.bcm.edu	36	13	57105611	57105611	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PCDH9	5101	hgsc.bcm.edu	36	13	66375734	66375734	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GPC5	2262	hgsc.bcm.edu	36	13	91143784	91143784	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TPP2	7174	hgsc.bcm.edu	36	13	102055171	102055171	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TUBB8	347688	hgsc.bcm.edu	36	10	85169	85169	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
LARP4B	23185	hgsc.bcm.edu	36	10	865531	865531	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ITIH5	80760	hgsc.bcm.edu	36	10	7658804	7658804	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ANKRD30A	91074	hgsc.bcm.edu	36	10	37526222	37526222	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BMS1	9790	hgsc.bcm.edu	36	10	42645857	42645857	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CCAR1	55749	hgsc.bcm.edu	36	10	70172282	70172282	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PRF1	55893	hgsc.bcm.edu	36	10	72028330	72028330	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
BMPR1A	657	hgsc.bcm.edu	36	10	88673417	88673417	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CPEB3	22849	hgsc.bcm.edu	36	10	93942335	93942335	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
LZTS2	84445	hgsc.bcm.edu	36	10	102756563	102756563	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TAF5	6877	hgsc.bcm.edu	36	10	105137815	105137815	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FGFR2	2263	hgsc.bcm.edu	36	10	123269552	123269552	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DMBT1	1755	hgsc.bcm.edu	36	10	124330388	124330388	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FASTKD3	79072	hgsc.bcm.edu	36	5	7920784	7920784	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DNAH5	1767	hgsc.bcm.edu	36	5	13917742	13917742	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ADAMTS12	81792	hgsc.bcm.edu	36	5	33679332	33679332	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RAB3C	115827	hgsc.bcm.edu	36	5	58057677	58057677	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PIK3R1	5295	hgsc.bcm.edu	36	5	67612576	67612576	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ARRDC3	57561	hgsc.bcm.edu	36	5	90714510	90714510	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SLCO6A1	133482	hgsc.bcm.edu	36	5	101862270	101862270	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
APC	324	hgsc.bcm.edu	36	5	112191543	112191543	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
APC	324	hgsc.bcm.edu	36	5	112198590	112198590	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
APC	324	hgsc.bcm.edu	36	5	112202985	112202985	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CHSY3	337876	hgsc.bcm.edu	36	5	129548619	129548619	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PCDHA7	56141	hgsc.bcm.edu	36	5	140195559	140195559	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PCDHGA1	56114	hgsc.bcm.edu	36	5	140692400	140692400	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ITK	3702	hgsc.bcm.edu	36	5	156603968	156603968	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GABRA1	2554	hgsc.bcm.edu	36	5	161232725	161232725	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
UIMC1	51720	hgsc.bcm.edu	36	5	176328237	176328237	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CLK4	57396	hgsc.bcm.edu	36	5	177983020	177983020	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SNAI2	6591	hgsc.bcm.edu	36	8	49994101	49994101	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PXK	54899	hgsc.bcm.edu	36	3	58343280	58343280	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SYT10	341359	hgsc.bcm.edu	36	12	33470699	33470699	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GLT8D2	83468	hgsc.bcm.edu	36	12	102921215	102921215	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TTN	7273	hgsc.bcm.edu	36	2	179186910	179186910	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
LRP1B	53353	hgsc.bcm.edu	36	2	140966684	140966685	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MUC4	4585	hgsc.bcm.edu	36	3	196991994	196992041	+	In_Frame_Del	DEL	GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT	GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT	GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FRG1	2483	hgsc.bcm.edu	36	4	191121272	191121272	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FRG1	2483	hgsc.bcm.edu	36	4	191121275	191121276	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
APC	324	hgsc.bcm.edu	36	5	112203575	112203578	+	Frame_Shift_Del	DEL	AGAG	AGAG	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	AGAG	AGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
RNF145	153830	hgsc.bcm.edu	36	5	158563208	158563208	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GPRIN1	114787	hgsc.bcm.edu	36	5	175958730	175958753	+	In_Frame_Del	DEL	AAGACCCAGGATCCTCCTTCCTCG	AAGACCCAGGATCCTCCTTCCTCG	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	AAGACCCAGGATCCTCCTTCCTCG	AAGACCCAGGATCCTCCTTCCTCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HLA-A	3105	hgsc.bcm.edu	36	6	30020008	30020008	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
GRIK2	2901	hgsc.bcm.edu	36	6	102610125	102610125	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TSPYL1	7259	hgsc.bcm.edu	36	6	116707158	116707159	+	In_Frame_Ins	INS	-	-	CAC	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
NRXN2	9379	hgsc.bcm.edu	36	11	64214494	64214495	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
FAM186A	121006	hgsc.bcm.edu	36	12	49032180	49032215	+	In_Frame_Del	DEL	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PIP4K2C	79837	hgsc.bcm.edu	36	12	56280443	56280445	+	In_Frame_Del	DEL	GAG	GAG	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	GAG	GAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SELPLG	6404	hgsc.bcm.edu	36	12	107541597	107541598	+	Frame_Shift_Ins	INS	-	-	TT	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
SELPLG	6404	hgsc.bcm.edu	36	12	107541600	107541600	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
ITPKA	3706	hgsc.bcm.edu	36	15	39581544	39581545	+	Frame_Shift_Ins	INS	-	-	ATGT	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MSLNL	401827	hgsc.bcm.edu	36	16	770767	770768	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
MSLNL	401827	hgsc.bcm.edu	36	16	770768	770769	+	Frame_Shift_Ins	INS	-	-	CT	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
PKD1L2	114780	hgsc.bcm.edu	36	16	79799650	79799651	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	TT	TT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
TRPM4	54795	hgsc.bcm.edu	36	19	54377841	54377876	+	In_Frame_Del	DEL	CAAAGCCCCAGCCCTAAAAGGGGGAGCTGCGGAGCT	CAAAGCCCCAGCCCTAAAAGGGGGAGCTGCGGAGCT	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	CAAAGCCCCAGCCCTAAAAGGGGGAGCTGCGGAGCT	CAAAGCCCCAGCCCTAAAAGGGGGAGCTGCGGAGCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
DEFB126	81623	hgsc.bcm.edu	36	20	74311	74312	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
C20orf132	140699	hgsc.bcm.edu	36	20	35241204	35241205	+	Frame_Shift_Ins	INS	-	-	CTTATAGACAGGGCCCCGCGGCCGGCACT	rs11467214	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
HMGXB4	10042	hgsc.bcm.edu	36	22	33991544	33991544	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
CRELD2	79174	hgsc.bcm.edu	36	22	48701940	48701977	+	Frame_Shift_Del	DEL	CCTCAGCAGTCAGGACCGGCCTCTCCGATTCTTACCCG	CCTCAGCAGTCAGGACCGGCCTCTCCGATTCTTACCCG	-	novel	unknown	TCGA-CM-4752-01A-01D-1408-10	TCGA-CM-4752-10A-01D-1408-10	CCTCAGCAGTCAGGACCGGCCTCTCCGATTCTTACCCG	CCTCAGCAGTCAGGACCGGCCTCTCCGATTCTTACCCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	b3f097be-a826-4999-9754-a17c1b8b5fff	2ff90f24-6f65-441e-82c3-6e1bbbbacd06
