Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
SDK1	221935	hgsc.bcm.edu	36	7	4116838	4116838	+	Silent	SNP	C	C	T	rs6980076	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DNAH11	8701	hgsc.bcm.edu	36	7	21606088	21606088	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DNAH11	8701	hgsc.bcm.edu	36	7	21771668	21771668	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DNAH11	8701	hgsc.bcm.edu	36	7	21780085	21780085	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
AEBP1	165	hgsc.bcm.edu	36	7	44118341	44118341	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
POLD2	5425	hgsc.bcm.edu	36	7	44120941	44120941	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PIK3CG	5294	hgsc.bcm.edu	36	7	106295396	106295396	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MET	8731	hgsc.bcm.edu	36	7	116210644	116210644	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
NUB1	51667	hgsc.bcm.edu	36	7	150688185	150688185	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
C20orf7	79133	hgsc.bcm.edu	36	20	13721838	13721838	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SEC23B	10483	hgsc.bcm.edu	36	20	18482976	18482976	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HCK	3055	hgsc.bcm.edu	36	20	30136000	30136000	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PTPRT	11122	hgsc.bcm.edu	36	20	40534534	40534534	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
STK4	6789	hgsc.bcm.edu	36	20	43063264	43063264	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ZDHHC8	29801	hgsc.bcm.edu	36	22	18506825	18506825	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MYO18B	84700	hgsc.bcm.edu	36	22	24681202	24681202	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DRG1	51534	hgsc.bcm.edu	36	22	30149349	30149349	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
LARGE	9215	hgsc.bcm.edu	36	22	32042112	32042112	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PARVB	29780	hgsc.bcm.edu	36	22	42846265	42846265	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CELSR1	9620	hgsc.bcm.edu	36	22	45139795	45139795	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DHRS4L2	317749	hgsc.bcm.edu	36	14	23529368	23529368	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KLHDC1	122773	hgsc.bcm.edu	36	14	49276610	49276610	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PLIN5	0	hgsc.bcm.edu	36	19	4476051	4476051	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PRODH2	58510	hgsc.bcm.edu	36	19	40995470	40995470	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ZNF382	84911	hgsc.bcm.edu	36	19	41809860	41809860	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SIRT2	22933	hgsc.bcm.edu	36	19	44061731	44061731	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KIR2DL3	3804	hgsc.bcm.edu	36	19	59950604	59950604	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CSMD1	64478	hgsc.bcm.edu	36	8	3034909	3034909	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
RB1CC1	9821	hgsc.bcm.edu	36	8	53698925	53698925	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MOS	55034	hgsc.bcm.edu	36	8	57188161	57188161	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TRAM1	23471	hgsc.bcm.edu	36	8	71658579	71658579	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
EPPK1	83481	hgsc.bcm.edu	36	8	145012795	145012795	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GRINA	2907	hgsc.bcm.edu	36	8	145138182	145138182	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GABRD	2563	hgsc.bcm.edu	36	1	1951367	1951367	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TNFRSF9	3604	hgsc.bcm.edu	36	1	7903501	7903501	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TAS1R2	80834	hgsc.bcm.edu	36	1	19053742	19053742	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KIF17	57576	hgsc.bcm.edu	36	1	20916662	20916662	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
C1QA	712	hgsc.bcm.edu	36	1	22838202	22838202	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SRRM1	10250	hgsc.bcm.edu	36	1	24870629	24870629	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CAP1	10487	hgsc.bcm.edu	36	1	40309751	40309751	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ZFYVE9	9372	hgsc.bcm.edu	36	1	52476925	52476925	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ZYG11A	440590	hgsc.bcm.edu	36	1	53119750	53119750	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DMRTB1	63948	hgsc.bcm.edu	36	1	53699737	53699737	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
RPE65	6121	hgsc.bcm.edu	36	1	68668160	68668160	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HORMAD1	84072	hgsc.bcm.edu	36	1	148947432	148947432	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HRNR	388697	hgsc.bcm.edu	36	1	150460011	150460011	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GON4L	54856	hgsc.bcm.edu	36	1	154050090	154050090	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TAGLN2	8407	hgsc.bcm.edu	36	1	158155250	158155250	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PAPPA2	60676	hgsc.bcm.edu	36	1	174831230	174831230	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HMCN1	83872	hgsc.bcm.edu	36	1	184310561	184310561	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
NFASC	23114	hgsc.bcm.edu	36	1	203209995	203209995	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DISP1	84976	hgsc.bcm.edu	36	1	221242668	221242668	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ANO5	203859	hgsc.bcm.edu	36	11	22250961	22250961	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TSPAN18	90139	hgsc.bcm.edu	36	11	44898030	44898030	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
OR4A15	81328	hgsc.bcm.edu	36	11	54892431	54892431	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
OR5D16	390144	hgsc.bcm.edu	36	11	55362908	55362908	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
OR8J1	219477	hgsc.bcm.edu	36	11	55884586	55884586	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KDM2A	22992	hgsc.bcm.edu	36	11	66739977	66739977	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SUV420H1	51111	hgsc.bcm.edu	36	11	67682379	67682379	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SHANK2	22941	hgsc.bcm.edu	36	11	70322235	70322235	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
FOLR2	2350	hgsc.bcm.edu	36	11	71610284	71610284	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MYO7A	4647	hgsc.bcm.edu	36	11	76578800	76578800	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
FAT3	120114	hgsc.bcm.edu	36	11	92255647	92255647	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ARHGAP32	0	hgsc.bcm.edu	36	11	128349616	128349616	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ADAMTS8	11095	hgsc.bcm.edu	36	11	129780783	129780783	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ATF6B	1388	hgsc.bcm.edu	36	6	32195689	32195689	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GPR115	221393	hgsc.bcm.edu	36	6	47790129	47790129	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DST	667	hgsc.bcm.edu	36	6	56605718	56605718	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SIM1	6492	hgsc.bcm.edu	36	6	100945444	100945444	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
AKD1	221264	hgsc.bcm.edu	36	6	110102101	110102101	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
FYN	2534	hgsc.bcm.edu	36	6	112147821	112147821	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SYNE1	23345	hgsc.bcm.edu	36	6	152571021	152571021	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TP53	7157	hgsc.bcm.edu	36	17	7518263	7518263	+	Missense_Mutation	SNP	C	C	T	rs11540652	byHapMap	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TP53	7157	hgsc.bcm.edu	36	17	7519182	7519182	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SPECC1	92521	hgsc.bcm.edu	36	17	20049342	20049342	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MED1	8930	hgsc.bcm.edu	36	17	34820127	34820127	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
WIPF2	147179	hgsc.bcm.edu	36	17	35686900	35686900	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KRTAP4-11	653240	hgsc.bcm.edu	36	17	36527683	36527683	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KRT9	3857	hgsc.bcm.edu	36	17	36979738	36979738	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
AOC3	8639	hgsc.bcm.edu	36	17	38261917	38261917	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MED13	9969	hgsc.bcm.edu	36	17	57414886	57414886	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
NCAM2	4685	hgsc.bcm.edu	36	21	21832135	21832135	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MORC3	23515	hgsc.bcm.edu	36	21	36638867	36638867	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DSCR4	10281	hgsc.bcm.edu	36	21	38348852	38348852	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SLC37A1	54020	hgsc.bcm.edu	36	21	42832751	42832751	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PCNT	5116	hgsc.bcm.edu	36	21	46570796	46570796	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ATP6V0C	527	hgsc.bcm.edu	36	16	2509321	2509321	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
NLRC3	197358	hgsc.bcm.edu	36	16	3554705	3554705	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
RSL1D1	26156	hgsc.bcm.edu	36	16	11839184	11839184	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SCNN1B	6338	hgsc.bcm.edu	36	16	23294568	23294568	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
FHOD1	29109	hgsc.bcm.edu	36	16	65828083	65828083	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
LDHD	197257	hgsc.bcm.edu	36	16	73704027	73704027	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TCF25	22980	hgsc.bcm.edu	36	16	88504543	88504543	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SEMA3G	56920	hgsc.bcm.edu	36	3	52451834	52451834	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
RFT1	91869	hgsc.bcm.edu	36	3	53114754	53114754	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DNAH12	201625	hgsc.bcm.edu	36	3	57361267	57361267	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
OR5H1	26341	hgsc.bcm.edu	36	3	99334658	99334658	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ATG3	64422	hgsc.bcm.edu	36	3	113739297	113739297	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
COL6A5	256076	hgsc.bcm.edu	36	3	131633402	131633402	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
LRCH3	84859	hgsc.bcm.edu	36	3	199043533	199043533	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SOX5	6660	hgsc.bcm.edu	36	12	23619896	23619896	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
FAM186A	121006	hgsc.bcm.edu	36	12	49043372	49043372	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KRT83	3889	hgsc.bcm.edu	36	12	51001078	51001078	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GLI1	2735	hgsc.bcm.edu	36	12	56145253	56145253	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CAPS2	84698	hgsc.bcm.edu	36	12	73962385	73962385	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
APAF1	317	hgsc.bcm.edu	36	12	97617377	97617377	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ANKS1B	56899	hgsc.bcm.edu	36	12	97725792	97725792	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
NR1H4	9971	hgsc.bcm.edu	36	12	99458718	99458718	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TDG	6996	hgsc.bcm.edu	36	12	102900834	102900834	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
EP400	57634	hgsc.bcm.edu	36	12	131037283	131037283	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CEP152	22995	hgsc.bcm.edu	36	15	46823800	46823800	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CEP152	22995	hgsc.bcm.edu	36	15	46841938	46841938	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
BMX	660	hgsc.bcm.edu	36	X	15450515	15450515	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
FTHL17	53940	hgsc.bcm.edu	36	X	30999478	30999478	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MAGEE2	139599	hgsc.bcm.edu	36	X	74921370	74921370	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GAK	2580	hgsc.bcm.edu	36	4	835661	835661	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TBC1D19	55296	hgsc.bcm.edu	36	4	26328695	26328695	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TBC1D19	55296	hgsc.bcm.edu	36	4	26328697	26328697	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ARAP2	116984	hgsc.bcm.edu	36	4	35906937	35906937	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KIAA1239	57495	hgsc.bcm.edu	36	4	37034447	37034447	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GRSF1	2926	hgsc.bcm.edu	36	4	71910721	71910721	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ANK2	287	hgsc.bcm.edu	36	4	114498500	114498500	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TRAM1L1	133022	hgsc.bcm.edu	36	4	118225414	118225414	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MMAA	387254	hgsc.bcm.edu	36	4	146794600	146794600	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SNX25	83891	hgsc.bcm.edu	36	4	186504687	186504687	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HADHB	3032	hgsc.bcm.edu	36	2	26355150	26355150	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CCT4	10575	hgsc.bcm.edu	36	2	61956770	61956770	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ADD2	119	hgsc.bcm.edu	36	2	70759420	70759420	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CTNNA2	1496	hgsc.bcm.edu	36	2	80662388	80662388	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MRPS9	64965	hgsc.bcm.edu	36	2	105082634	105082634	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CNTNAP5	129684	hgsc.bcm.edu	36	2	125388201	125388201	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
POTEF	728378	hgsc.bcm.edu	36	2	130548786	130548786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SCN9A	6335	hgsc.bcm.edu	36	2	166858000	166858000	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
LRP2	4036	hgsc.bcm.edu	36	2	169752905	169752905	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ITGA4	3676	hgsc.bcm.edu	36	2	182030669	182030669	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ITGA4	3676	hgsc.bcm.edu	36	2	182048154	182048154	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
RAPH1	65059	hgsc.bcm.edu	36	2	204028509	204028509	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
NCL	4691	hgsc.bcm.edu	36	2	232033507	232033507	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GLIS3	169792	hgsc.bcm.edu	36	9	4108116	4108116	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HAUS6	54801	hgsc.bcm.edu	36	9	19048102	19048102	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TMOD1	7111	hgsc.bcm.edu	36	9	99366218	99366218	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GPR144	347088	hgsc.bcm.edu	36	9	126277695	126277695	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GARNL3	84253	hgsc.bcm.edu	36	9	129135201	129135201	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
FAM102A	399665	hgsc.bcm.edu	36	9	129747536	129747536	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DCLK1	9201	hgsc.bcm.edu	36	13	35584223	35584223	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ZC3H13	23091	hgsc.bcm.edu	36	13	45447684	45447684	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ZC3H13	23091	hgsc.bcm.edu	36	13	45457499	45457499	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
RB1	5925	hgsc.bcm.edu	36	13	47935914	47935914	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DIP2C	22982	hgsc.bcm.edu	36	10	451756	451756	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ARMC3	219681	hgsc.bcm.edu	36	10	23310335	23310335	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
DNAJC12	56521	hgsc.bcm.edu	36	10	69235409	69235409	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TTC18	118491	hgsc.bcm.edu	36	10	74704328	74704328	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PPRC1	23082	hgsc.bcm.edu	36	10	103889080	103889080	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TAF5	6877	hgsc.bcm.edu	36	10	105128118	105128118	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
FOXI2	399823	hgsc.bcm.edu	36	10	129427062	129427062	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PRDM9	56979	hgsc.bcm.edu	36	5	23558507	23558507	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CDH6	1004	hgsc.bcm.edu	36	5	31358864	31358864	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CARD6	84674	hgsc.bcm.edu	36	5	40879380	40879380	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HCN1	348980	hgsc.bcm.edu	36	5	45298015	45298015	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SLCO4C1	353189	hgsc.bcm.edu	36	5	101613336	101613336	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
APC	324	hgsc.bcm.edu	36	5	112156042	112156042	+	Nonsense_Mutation	SNP	C	C	T	rs62619935	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
APC	324	hgsc.bcm.edu	36	5	112202643	112202643	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
APC	324	hgsc.bcm.edu	36	5	112205205	112205205	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KDM3B	51780	hgsc.bcm.edu	36	5	137754667	137754667	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CD14	4695	hgsc.bcm.edu	36	5	139991645	139991645	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PCDHA2	56146	hgsc.bcm.edu	36	5	140156997	140156997	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PCDHA13	56136	hgsc.bcm.edu	36	5	140243379	140243379	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PCDHB3	56132	hgsc.bcm.edu	36	5	140462542	140462542	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PCDHB14	56122	hgsc.bcm.edu	36	5	140583487	140583487	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PCDHGA5	56110	hgsc.bcm.edu	36	5	140870744	140870744	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
RBM27	54439	hgsc.bcm.edu	36	5	145593402	145593402	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
SH3TC2	79628	hgsc.bcm.edu	36	5	148386896	148386896	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
GABRA1	2554	hgsc.bcm.edu	36	5	161235168	161235168	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TMED9	54732	hgsc.bcm.edu	36	5	176954951	176954951	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
C3orf17	25871	hgsc.bcm.edu	36	3	114214941	114214941	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
TCHH	7062	hgsc.bcm.edu	36	1	150350799	150350800	+	In_Frame_Ins	INS	-	-	TGCTGCTCGCGCCTCTCC	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MUC4	4585	hgsc.bcm.edu	36	3	196999393	196999440	+	In_Frame_Del	DEL	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	-	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
PRDM6	93166	hgsc.bcm.edu	36	5	122453870	122453871	+	In_Frame_Ins	INS	-	-	CCTCCGCCT	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HLA-DQA1	3117	hgsc.bcm.edu	36	6	32717217	32717219	+	In_Frame_Del	DEL	GGT	GGT	-	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	GGT	GGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HLA-DQA1	3117	hgsc.bcm.edu	36	6	32717274	32717275	+	Frame_Shift_Ins	INS	-	-	G	rs9282026	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
HLA-DQA1	3117	hgsc.bcm.edu	36	6	32717277	32717277	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
ADAMTS8	11095	hgsc.bcm.edu	36	11	129802773	129802773	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
KRT4	3851	hgsc.bcm.edu	36	12	51493869	51493870	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
MBD6	114785	hgsc.bcm.edu	36	12	56207998	56207999	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
IFI27	3429	hgsc.bcm.edu	36	14	93651883	93651884	+	In_Frame_Ins	INS	-	-	GGCCATGGC	rs3833507	byCluster	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
CBX4	8535	hgsc.bcm.edu	36	17	75422512	75422513	+	In_Frame_Ins	INS	-	-	GCCGCC	novel	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
RBM38	55544	hgsc.bcm.edu	36	20	55400099	55400100	+	Frame_Shift_Ins	INS	-	-	C	rs11481309	unknown	TCGA-CM-5341-01A-01D-1408-10	TCGA-CM-5341-10A-01D-1408-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	80160793-6b74-4edd-8ee7-8df8bed27eba	c021c7fb-12c2-4c65-aa7e-c236c627dff6
