Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
PRKAR1B	5575	hgsc.bcm.edu	36	7	686778	686778	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FOXK1	221937	hgsc.bcm.edu	36	7	4763289	4763289	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHF14	9678	hgsc.bcm.edu	36	7	11042659	11042659	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DGKB	1607	hgsc.bcm.edu	36	7	14724827	14724827	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SOSTDC1	25928	hgsc.bcm.edu	36	7	16469094	16469094	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HDAC9	9734	hgsc.bcm.edu	36	7	18733870	18733870	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM126A	84668	hgsc.bcm.edu	36	7	22970614	22970614	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MPP6	51678	hgsc.bcm.edu	36	7	24656823	24656823	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOD1	10392	hgsc.bcm.edu	36	7	30454488	30454488	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CRHR2	1395	hgsc.bcm.edu	36	7	30688056	30688056	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INMT	11185	hgsc.bcm.edu	36	7	30761681	30761681	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AVL9	23080	hgsc.bcm.edu	36	7	32549278	32549278	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HECW1	23072	hgsc.bcm.edu	36	7	43451022	43451022	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
H2AFV	94239	hgsc.bcm.edu	36	7	44849440	44849440	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IGFBP3	3486	hgsc.bcm.edu	36	7	45923348	45923348	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GRB10	2887	hgsc.bcm.edu	36	7	50653298	50653298	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AUTS2	282553	hgsc.bcm.edu	36	7	69866083	69866083	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WBSCR17	64409	hgsc.bcm.edu	36	7	70491219	70491219	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MLXIPL	51085	hgsc.bcm.edu	36	7	72676537	72676537	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GTF2IRD1	9569	hgsc.bcm.edu	36	7	73598010	73598010	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GTF2IRD2	84163	hgsc.bcm.edu	36	7	73849399	73849399	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIP1	3092	hgsc.bcm.edu	36	7	75023397	75023397	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CACNA2D1	781	hgsc.bcm.edu	36	7	81429207	81429207	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCLO	27445	hgsc.bcm.edu	36	7	82382134	82382134	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCLO	27445	hgsc.bcm.edu	36	7	82418124	82418124	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCLO	27445	hgsc.bcm.edu	36	7	82423542	82423542	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEMA3E	9723	hgsc.bcm.edu	36	7	82875641	82875641	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF804B	219578	hgsc.bcm.edu	36	7	88802285	88802285	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AKAP9	10142	hgsc.bcm.edu	36	7	91564459	91564459	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SAMD9	54809	hgsc.bcm.edu	36	7	92571672	92571672	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPP1R9A	55607	hgsc.bcm.edu	36	7	94377839	94377839	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRRAP	8295	hgsc.bcm.edu	36	7	98385292	98385292	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CUX1	1523	hgsc.bcm.edu	36	7	101600471	101600471	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ORAI2	80228	hgsc.bcm.edu	36	7	101874236	101874236	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LAMB1	3912	hgsc.bcm.edu	36	7	107403005	107403005	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM168	64418	hgsc.bcm.edu	36	7	112200114	112200114	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPP1R3A	5506	hgsc.bcm.edu	36	7	113305023	113305023	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPP1R3A	5506	hgsc.bcm.edu	36	7	113305425	113305425	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MET	8731	hgsc.bcm.edu	36	7	116127037	116127037	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CADPS2	93664	hgsc.bcm.edu	36	7	122008472	122008472	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FSCN3	29999	hgsc.bcm.edu	36	7	127023293	127023293	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FLNC	2318	hgsc.bcm.edu	36	7	128275001	128275001	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCP	375616	hgsc.bcm.edu	36	7	128317772	128317772	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TNPO3	23534	hgsc.bcm.edu	36	7	128399844	128399844	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CPA5	93979	hgsc.bcm.edu	36	7	129795037	129795037	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MEST	4232	hgsc.bcm.edu	36	7	129925345	129925345	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AKR1B10	57016	hgsc.bcm.edu	36	7	133868332	133868332	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIPK2	28996	hgsc.bcm.edu	36	7	138966460	138966460	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BRAF	673	hgsc.bcm.edu	36	7	140099605	140099605	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BRAF	673	hgsc.bcm.edu	36	7	140099616	140099616	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EZH2	2146	hgsc.bcm.edu	36	7	148154582	148154582	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF746	155061	hgsc.bcm.edu	36	7	148803326	148803326	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF746	155061	hgsc.bcm.edu	36	7	148805023	148805023	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SSPO	23145	hgsc.bcm.edu	36	7	149122871	149122871	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF775	285971	hgsc.bcm.edu	36	7	149724625	149724625	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AGAP3	116988	hgsc.bcm.edu	36	7	150468079	150468079	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABCF2	10061	hgsc.bcm.edu	36	7	150546785	150546785	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C20orf29	55317	hgsc.bcm.edu	36	20	3752846	3752846	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDS2	8760	hgsc.bcm.edu	36	20	5118471	5118471	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRN4	164312	hgsc.bcm.edu	36	20	5969782	5969782	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RIN2	54453	hgsc.bcm.edu	36	20	19904238	19904238	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CRNKL1	51340	hgsc.bcm.edu	36	20	19981185	19981185	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDRG1	81572	hgsc.bcm.edu	36	20	29997315	29997315	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASXL1	171023	hgsc.bcm.edu	36	20	30485951	30485951	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CBFA2T2	9139	hgsc.bcm.edu	36	20	31674749	31674749	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYH7B	57644	hgsc.bcm.edu	36	20	33039581	33039581	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRPC4AP	26133	hgsc.bcm.edu	36	20	33054969	33054969	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPAG4	6676	hgsc.bcm.edu	36	20	33672301	33672301	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C20orf117	140710	hgsc.bcm.edu	36	20	34877677	34877677	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C20orf132	140699	hgsc.bcm.edu	36	20	35203012	35203012	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPN2	6185	hgsc.bcm.edu	36	20	35246108	35246108	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBPJL	11317	hgsc.bcm.edu	36	20	43375524	43375524	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIGT	51604	hgsc.bcm.edu	36	20	43478672	43478672	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WFDC10A	140832	hgsc.bcm.edu	36	20	43693021	43693021	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPINT4	391253	hgsc.bcm.edu	36	20	43784520	43784520	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCIF1	63935	hgsc.bcm.edu	36	20	44006997	44006997	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ELMO2	63916	hgsc.bcm.edu	36	20	44455589	44455589	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SULF2	55959	hgsc.bcm.edu	36	20	45819399	45819399	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNFX1	57169	hgsc.bcm.edu	36	20	47321188	47321188	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SALL4	57167	hgsc.bcm.edu	36	20	49840173	49840173	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TH1L	51497	hgsc.bcm.edu	36	20	56998333	56998333	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNQ2	3785	hgsc.bcm.edu	36	20	61546526	61546526	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNQ2	3785	hgsc.bcm.edu	36	20	61547150	61547150	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRIC285	85441	hgsc.bcm.edu	36	20	61665683	61665683	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RTEL1	51750	hgsc.bcm.edu	36	20	61791360	61791360	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZBTB46	140685	hgsc.bcm.edu	36	20	61891646	61891646	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UCKL1	54963	hgsc.bcm.edu	36	20	62048427	62048427	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
XKR3	150165	hgsc.bcm.edu	36	22	15645233	15645233	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MICAL3	57553	hgsc.bcm.edu	36	22	16679508	16679508	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KLHL22	84861	hgsc.bcm.edu	36	22	19130738	19130738	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIC2	23119	hgsc.bcm.edu	36	22	20130078	20130078	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GGT5	2687	hgsc.bcm.edu	36	22	22958935	22958935	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIWIL3	440822	hgsc.bcm.edu	36	22	23450973	23450973	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SGSM1	129049	hgsc.bcm.edu	36	22	23573611	23573611	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1671	85379	hgsc.bcm.edu	36	22	23766152	23766152	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TFIP11	24144	hgsc.bcm.edu	36	22	25225376	25225376	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EWSR1	2130	hgsc.bcm.edu	36	22	28012981	28012981	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEC14L4	284904	hgsc.bcm.edu	36	22	29218131	29218131	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DRG1	51534	hgsc.bcm.edu	36	22	30149349	30149349	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
APOL6	80830	hgsc.bcm.edu	36	22	34385544	34385544	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
APOL3	80833	hgsc.bcm.edu	36	22	34886852	34886852	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYH9	4627	hgsc.bcm.edu	36	22	35026907	35026907	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYH9	4627	hgsc.bcm.edu	36	22	35045550	35045550	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLA2G6	8398	hgsc.bcm.edu	36	22	36869146	36869146	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CBX6	23466	hgsc.bcm.edu	36	22	37592205	37592205	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
APOBEC3G	60489	hgsc.bcm.edu	36	22	37804953	37804953	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CBX7	23492	hgsc.bcm.edu	36	22	37859935	37859935	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CACNA1I	8911	hgsc.bcm.edu	36	22	38367087	38367087	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TNRC6B	23112	hgsc.bcm.edu	36	22	39006023	39006023	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MKL1	57591	hgsc.bcm.edu	36	22	39137586	39137586	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MKL1	57591	hgsc.bcm.edu	36	22	39157383	39157383	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NAGA	4668	hgsc.bcm.edu	36	22	40786315	40786315	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTLL12	23170	hgsc.bcm.edu	36	22	41898357	41898357	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CELSR1	9620	hgsc.bcm.edu	36	22	45213833	45213833	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MOV10L1	54456	hgsc.bcm.edu	36	22	48923702	48923702	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TUBGCP6	85378	hgsc.bcm.edu	36	22	48999705	48999705	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLXNB2	23654	hgsc.bcm.edu	36	22	49061185	49061185	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHKB	1120	hgsc.bcm.edu	36	22	49367622	49367622	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRP10	26020	hgsc.bcm.edu	36	14	22415014	22415014	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
REM2	161253	hgsc.bcm.edu	36	14	22423852	22423852	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDH24	64403	hgsc.bcm.edu	36	14	22587371	22587371	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACIN1	22985	hgsc.bcm.edu	36	14	22601545	22601545	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CTSG	1511	hgsc.bcm.edu	36	14	24112803	24112803	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRKD1	5587	hgsc.bcm.edu	36	14	29116361	29116361	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRKD1	5587	hgsc.bcm.edu	36	14	29116364	29116364	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HECTD1	25831	hgsc.bcm.edu	36	14	30660409	30660409	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RTN1	6252	hgsc.bcm.edu	36	14	59143776	59143776	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SIX4	51804	hgsc.bcm.edu	36	14	60256407	60256407	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRMT5	57570	hgsc.bcm.edu	36	14	60512084	60512084	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRMT5	57570	hgsc.bcm.edu	36	14	60512236	60512236	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNH5	27133	hgsc.bcm.edu	36	14	62244105	62244105	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYNE2	23224	hgsc.bcm.edu	36	14	63588193	63588193	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYNE2	23224	hgsc.bcm.edu	36	14	63745373	63745373	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPTB	6710	hgsc.bcm.edu	36	14	64290220	64290220	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFYVE26	23503	hgsc.bcm.edu	36	14	67319340	67319340	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFYVE26	23503	hgsc.bcm.edu	36	14	67340703	67340703	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAP3K9	4293	hgsc.bcm.edu	36	14	70270236	70270236	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SIPA1L1	26037	hgsc.bcm.edu	36	14	71186943	71186943	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
YLPM1	56252	hgsc.bcm.edu	36	14	74300456	74300456	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM63C	57156	hgsc.bcm.edu	36	14	76755668	76755668	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TC2N	123036	hgsc.bcm.edu	36	14	91348597	91348597	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FBLN5	10516	hgsc.bcm.edu	36	14	91417403	91417403	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GOLGA5	440270	hgsc.bcm.edu	36	14	92352440	92352440	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRIMA1	145270	hgsc.bcm.edu	36	14	93323754	93323754	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SERPINA5	5104	hgsc.bcm.edu	36	14	94126977	94126977	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATG2B	55102	hgsc.bcm.edu	36	14	95827014	95827014	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RTL1	388015	hgsc.bcm.edu	36	14	100420329	100420329	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DIO3	1735	hgsc.bcm.edu	36	14	101098272	101098272	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR20	91833	hgsc.bcm.edu	36	14	101758920	101758920	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TECPR2	9895	hgsc.bcm.edu	36	14	102001321	102001321	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASPG	374569	hgsc.bcm.edu	36	14	103640419	103640419	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF26A	26153	hgsc.bcm.edu	36	14	103712049	103712049	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INF2	64423	hgsc.bcm.edu	36	14	104246101	104246101	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA0284	283638	hgsc.bcm.edu	36	14	104430387	104430387	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AHNAK2	113146	hgsc.bcm.edu	36	14	104484949	104484949	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ELANE	1991	hgsc.bcm.edu	36	19	806753	806753	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MEX3D	399664	hgsc.bcm.edu	36	19	1507852	1507852	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TCF3	83439	hgsc.bcm.edu	36	19	1572937	1572937	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BTBD2	55643	hgsc.bcm.edu	36	19	1941741	1941741	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AP3D1	8943	hgsc.bcm.edu	36	19	2066371	2066371	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TJP3	27134	hgsc.bcm.edu	36	19	3689920	3689920	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STAP2	55620	hgsc.bcm.edu	36	19	4279804	4279804	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHAF1A	10036	hgsc.bcm.edu	36	19	4384118	4384118	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HDGFRP2	0	hgsc.bcm.edu	36	19	4449825	4449825	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLIN3	0	hgsc.bcm.edu	36	19	4790212	4790212	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC25A23	79085	hgsc.bcm.edu	36	19	6393099	6393099	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIP10	9322	hgsc.bcm.edu	36	19	6695700	6695700	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF358	140467	hgsc.bcm.edu	36	19	7490233	7490233	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
XAB2	56949	hgsc.bcm.edu	36	19	7597072	7597072	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLEC4G	339390	hgsc.bcm.edu	36	19	7700388	7700388	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EVI5L	115704	hgsc.bcm.edu	36	19	7832877	7832877	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CD320	51293	hgsc.bcm.edu	36	19	8275997	8275997	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MUC16	94025	hgsc.bcm.edu	36	19	8875654	8875654	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MUC16	94025	hgsc.bcm.edu	36	19	8930886	8930886	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OLFM2	93145	hgsc.bcm.edu	36	19	9826508	9826508	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL5A3	50509	hgsc.bcm.edu	36	19	9946036	9946036	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNMT1	1786	hgsc.bcm.edu	36	19	10115635	10115635	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDC37	11140	hgsc.bcm.edu	36	19	10367734	10367734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ILF3	3609	hgsc.bcm.edu	36	19	10650839	10650839	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EPOR	2057	hgsc.bcm.edu	36	19	11350155	11350155	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF491	126069	hgsc.bcm.edu	36	19	11777898	11777898	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CALR	811	hgsc.bcm.edu	36	19	12911931	12911931	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RAD23A	5886	hgsc.bcm.edu	36	19	12917783	12917783	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NANOS3	342977	hgsc.bcm.edu	36	19	13849322	13849322	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LPHN1	22859	hgsc.bcm.edu	36	19	14134794	14134794	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CD97	976	hgsc.bcm.edu	36	19	14374443	14374443	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GIPC1	10755	hgsc.bcm.edu	36	19	14452138	14452138	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR1I1	126370	hgsc.bcm.edu	36	19	15059126	15059126	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BRD4	23476	hgsc.bcm.edu	36	19	15227897	15227897	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CYP4F12	66002	hgsc.bcm.edu	36	19	15645520	15645520	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR10H5	284433	hgsc.bcm.edu	36	19	15766218	15766218	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C19orf44	84167	hgsc.bcm.edu	36	19	16475053	16475053	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BST2	684	hgsc.bcm.edu	36	19	17377375	17377375	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAST3	23031	hgsc.bcm.edu	36	19	18115618	18115618	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAU2	0	hgsc.bcm.edu	36	19	19315717	19315717	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAU2	0	hgsc.bcm.edu	36	19	19315737	19315737	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CILP2	148113	hgsc.bcm.edu	36	19	19517444	19517444	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF682	91120	hgsc.bcm.edu	36	19	19978931	19978931	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VSTM2B	342865	hgsc.bcm.edu	36	19	34712652	34712652	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LSM14A	26065	hgsc.bcm.edu	36	19	39391714	39391714	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF30	90075	hgsc.bcm.edu	36	19	40114609	40114609	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAG	4099	hgsc.bcm.edu	36	19	40492841	40492841	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MLL4	9757	hgsc.bcm.edu	36	19	40910884	40910884	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MLL4	9757	hgsc.bcm.edu	36	19	40919986	40919986	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGAP33	0	hgsc.bcm.edu	36	19	40970336	40970336	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRFN3	79414	hgsc.bcm.edu	36	19	41122952	41122952	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF567	163081	hgsc.bcm.edu	36	19	41902074	41902074	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF571	51276	hgsc.bcm.edu	36	19	42748579	42748579	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RYR1	6261	hgsc.bcm.edu	36	19	43668311	43668311	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PAK4	10298	hgsc.bcm.edu	36	19	44360199	44360199	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POU2F2	5452	hgsc.bcm.edu	36	19	47318548	47318548	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
XRCC1	7515	hgsc.bcm.edu	36	19	48748017	48748017	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLAUR	5329	hgsc.bcm.edu	36	19	48848363	48848363	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF229	7772	hgsc.bcm.edu	36	19	49626353	49626353	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PVRL2	5819	hgsc.bcm.edu	36	19	50073381	50073381	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RTN2	6253	hgsc.bcm.edu	36	19	50689794	50689794	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC61	729440	hgsc.bcm.edu	36	19	51213435	51213435	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIF3A	64344	hgsc.bcm.edu	36	19	51500422	51500422	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC1A5	6510	hgsc.bcm.edu	36	19	51977546	51977546	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DHX34	9704	hgsc.bcm.edu	36	19	52571046	52571046	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC8A2	6543	hgsc.bcm.edu	36	19	52652594	52652594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF541	84215	hgsc.bcm.edu	36	19	52733276	52733276	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPHK2	56848	hgsc.bcm.edu	36	19	53824442	53824442	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NTN5	126147	hgsc.bcm.edu	36	19	53859810	53859810	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TULP2	7288	hgsc.bcm.edu	36	19	54077128	54077128	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TULP2	7288	hgsc.bcm.edu	36	19	54083079	54083079	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPFIA3	8541	hgsc.bcm.edu	36	19	54323994	54323994	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPS11	6205	hgsc.bcm.edu	36	19	54693077	54693077	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PNKP	11284	hgsc.bcm.edu	36	19	55057793	55057793	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NAPSA	9476	hgsc.bcm.edu	36	19	55553694	55553694	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NR1H2	7376	hgsc.bcm.edu	36	19	55573348	55573348	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POLD1	5424	hgsc.bcm.edu	36	19	55597707	55597707	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYBPC2	4606	hgsc.bcm.edu	36	19	55650616	55650616	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SHANK1	50944	hgsc.bcm.edu	36	19	55857466	55857466	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SHANK1	50944	hgsc.bcm.edu	36	19	55857735	55857735	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SIGLEC6	946	hgsc.bcm.edu	36	19	56722844	56722844	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF880	0	hgsc.bcm.edu	36	19	57579614	57579614	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMC4	147798	hgsc.bcm.edu	36	19	59360075	59360075	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LILRA6	79168	hgsc.bcm.edu	36	19	59436234	59436234	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NAT14	57106	hgsc.bcm.edu	36	19	60689707	60689707	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EPN1	29924	hgsc.bcm.edu	36	19	60895937	60895937	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EPN1	29924	hgsc.bcm.edu	36	19	60898445	60898445	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NLRP13	126204	hgsc.bcm.edu	36	19	61115766	61115766	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFP28	140612	hgsc.bcm.edu	36	19	61757627	61757627	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF530	348327	hgsc.bcm.edu	36	19	62810055	62810055	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF671	79891	hgsc.bcm.edu	36	19	62924592	62924592	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF256	10172	hgsc.bcm.edu	36	19	63145722	63145722	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF606	80095	hgsc.bcm.edu	36	19	63181488	63181488	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF837	116412	hgsc.bcm.edu	36	19	63570997	63570997	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF132	7691	hgsc.bcm.edu	36	19	63637261	63637261	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DLGAP2	9228	hgsc.bcm.edu	36	8	1604033	1604033	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSMD1	64478	hgsc.bcm.edu	36	8	3075109	3075109	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSMD1	64478	hgsc.bcm.edu	36	8	3204212	3204212	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RP1L1	94137	hgsc.bcm.edu	36	8	10504489	10504489	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TUSC3	7991	hgsc.bcm.edu	36	8	15561391	15561391	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FGF20	26281	hgsc.bcm.edu	36	8	16903862	16903862	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NAT2	81539	hgsc.bcm.edu	36	8	18302585	18302585	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NEFM	4741	hgsc.bcm.edu	36	8	24827289	24827289	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TACC1	6867	hgsc.bcm.edu	36	8	38796406	38796406	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAM2	2515	hgsc.bcm.edu	36	8	39732493	39732493	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IDO1	3620	hgsc.bcm.edu	36	8	39904647	39904647	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLAT	5327	hgsc.bcm.edu	36	8	42152672	42152672	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
XKR4	114786	hgsc.bcm.edu	36	8	56177612	56177612	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VCPIP1	80124	hgsc.bcm.edu	36	8	67709696	67709696	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PREX2	80243	hgsc.bcm.edu	36	8	69119375	69119375	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNB2	9312	hgsc.bcm.edu	36	8	74012776	74012776	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFHX4	79776	hgsc.bcm.edu	36	8	77925977	77925977	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CA3	761	hgsc.bcm.edu	36	8	86538423	86538423	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC7A13	157724	hgsc.bcm.edu	36	8	87298890	87298890	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM64	169200	hgsc.bcm.edu	36	8	91726769	91726769	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBM12B	389677	hgsc.bcm.edu	36	8	94815087	94815087	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UBR5	51366	hgsc.bcm.edu	36	8	103346627	103346627	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYBU	55638	hgsc.bcm.edu	36	8	110661223	110661223	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL14A1	7373	hgsc.bcm.edu	36	8	121378945	121378945	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM83A	84985	hgsc.bcm.edu	36	8	124264416	124264416	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATAD2	29028	hgsc.bcm.edu	36	8	124453235	124453235	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM49B	51571	hgsc.bcm.edu	36	8	130930698	130930698	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASAP1	50807	hgsc.bcm.edu	36	8	131209509	131209509	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADCY8	114	hgsc.bcm.edu	36	8	132121059	132121059	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TG	7038	hgsc.bcm.edu	36	8	133969860	133969860	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLA	51091	hgsc.bcm.edu	36	8	134121482	134121482	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WISP1	8840	hgsc.bcm.edu	36	8	134294487	134294487	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTK2	5747	hgsc.bcm.edu	36	8	141970015	141970015	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FLJ43860	389690	hgsc.bcm.edu	36	8	142557178	142557178	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLEC	0	hgsc.bcm.edu	36	8	145076690	145076690	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLEC	0	hgsc.bcm.edu	36	8	145078390	145078390	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLEC	0	hgsc.bcm.edu	36	8	145081271	145081271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CPSF1	29894	hgsc.bcm.edu	36	8	145589358	145589358	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF16	7564	hgsc.bcm.edu	36	8	146127333	146127333	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF16	7564	hgsc.bcm.edu	36	8	146127539	146127539	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AGRN	375790	hgsc.bcm.edu	36	1	970642	970642	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTLL10	254173	hgsc.bcm.edu	36	1	1110356	1110356	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCNN1D	6339	hgsc.bcm.edu	36	1	1209309	1209309	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC35E2B	0	hgsc.bcm.edu	36	1	1587153	1587153	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MEGF6	1953	hgsc.bcm.edu	36	1	3412580	3412580	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC2A7	155184	hgsc.bcm.edu	36	1	8997490	8997490	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIK3CD	22883	hgsc.bcm.edu	36	1	9703503	9703503	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTCHD2	57540	hgsc.bcm.edu	36	1	11497110	11497110	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FBXO6	26270	hgsc.bcm.edu	36	1	11655923	11655923	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRDM2	7799	hgsc.bcm.edu	36	1	13979739	13979739	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CROCC	9696	hgsc.bcm.edu	36	1	17157826	17157826	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP13A2	23400	hgsc.bcm.edu	36	1	17185317	17185317	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UBR4	23352	hgsc.bcm.edu	36	1	19345935	19345935	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PINK1	65018	hgsc.bcm.edu	36	1	20847707	20847707	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF17	57576	hgsc.bcm.edu	36	1	20863736	20863736	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF17	57576	hgsc.bcm.edu	36	1	20881871	20881871	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NBPF3	84224	hgsc.bcm.edu	36	1	21682372	21682372	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF436	80818	hgsc.bcm.edu	36	1	23561701	23561701	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASAP3	55616	hgsc.bcm.edu	36	1	23636541	23636541	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYOM3	127294	hgsc.bcm.edu	36	1	24273244	24273244	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GRHL3	57822	hgsc.bcm.edu	36	1	24545705	24545705	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SRRM1	10250	hgsc.bcm.edu	36	1	24870619	24870619	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF683	257101	hgsc.bcm.edu	36	1	26563882	26563882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPS6KA1	6195	hgsc.bcm.edu	36	1	26754270	26754270	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPN2	54707	hgsc.bcm.edu	36	1	27088049	27088049	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC9A1	6548	hgsc.bcm.edu	36	1	27308724	27308724	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AHDC1	27245	hgsc.bcm.edu	36	1	27747161	27747161	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL16A1	1307	hgsc.bcm.edu	36	1	31899860	31899860	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KPNA6	23633	hgsc.bcm.edu	36	1	32397663	32397663	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HPCA	3208	hgsc.bcm.edu	36	1	33127112	33127112	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF19B	127544	hgsc.bcm.edu	36	1	33182284	33182284	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DLGAP3	58512	hgsc.bcm.edu	36	1	35107083	35107083	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM176B	55194	hgsc.bcm.edu	36	1	36560862	36560862	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSF3R	1441	hgsc.bcm.edu	36	1	36707919	36707919	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GRIK3	2899	hgsc.bcm.edu	36	1	37040213	37040213	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GRIK3	2899	hgsc.bcm.edu	36	1	37079990	37079990	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SNIP1	79753	hgsc.bcm.edu	36	1	37776183	37776183	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MTF1	4661	hgsc.bcm.edu	36	1	38076899	38076899	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RHBDL2	54933	hgsc.bcm.edu	36	1	39134318	39134318	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MACF1	23499	hgsc.bcm.edu	36	1	39523608	39523608	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EDN2	1907	hgsc.bcm.edu	36	1	41719364	41719364	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIVEP3	59269	hgsc.bcm.edu	36	1	41820484	41820484	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LEPRE1	64175	hgsc.bcm.edu	36	1	42988504	42988504	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EBNA1BP2	10969	hgsc.bcm.edu	36	1	43410583	43410583	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MPL	4352	hgsc.bcm.edu	36	1	43577749	43577749	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP6V0B	533	hgsc.bcm.edu	36	1	44215462	44215462	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTCH2	8643	hgsc.bcm.edu	36	1	45080124	45080124	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EPS15	2060	hgsc.bcm.edu	36	1	51647810	51647810	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCSK9	255738	hgsc.bcm.edu	36	1	55294414	55294414	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C8B	732	hgsc.bcm.edu	36	1	57179170	57179170	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INADL	10207	hgsc.bcm.edu	36	1	62137900	62137900	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UBE2U	148581	hgsc.bcm.edu	36	1	64445039	64445039	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRC40	55631	hgsc.bcm.edu	36	1	70443696	70443696	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC44A5	204962	hgsc.bcm.edu	36	1	75481159	75481159	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL24A1	255631	hgsc.bcm.edu	36	1	86199535	86199535	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ODF2L	57489	hgsc.bcm.edu	36	1	86591147	86591147	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MTF2	22823	hgsc.bcm.edu	36	1	93375010	93375010	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RWDD3	25950	hgsc.bcm.edu	36	1	95472459	95472459	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LPPR5	0	hgsc.bcm.edu	36	1	99242746	99242746	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AGL	178	hgsc.bcm.edu	36	1	100122274	100122274	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DBT	1629	hgsc.bcm.edu	36	1	100444635	100444635	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DBT	1629	hgsc.bcm.edu	36	1	100469038	100469038	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VCAM1	7412	hgsc.bcm.edu	36	1	100969595	100969595	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FNDC7	163479	hgsc.bcm.edu	36	1	109066634	109066634	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STXBP3	6814	hgsc.bcm.edu	36	1	109123552	109123552	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C1orf194	127003	hgsc.bcm.edu	36	1	109451166	109451166	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CYB561D1	284613	hgsc.bcm.edu	36	1	109840333	109840333	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GSTM1	2944	hgsc.bcm.edu	36	1	110033398	110033398	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GSTM5	2949	hgsc.bcm.edu	36	1	110061517	110061517	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM40A	85369	hgsc.bcm.edu	36	1	110385719	110385719	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNA3	3738	hgsc.bcm.edu	36	1	111018549	111018549	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WNT2B	7482	hgsc.bcm.edu	36	1	112864434	112864434	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAGI3	260425	hgsc.bcm.edu	36	1	113958788	113958788	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOTCH2	4853	hgsc.bcm.edu	36	1	120259670	120259670	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDE4DIP	9659	hgsc.bcm.edu	36	1	143585386	143585386	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDE4DIP	9659	hgsc.bcm.edu	36	1	143592876	143592876	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITGA10	8515	hgsc.bcm.edu	36	1	144243509	144243509	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FMO5	2330	hgsc.bcm.edu	36	1	145139448	145139448	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GJA8	2703	hgsc.bcm.edu	36	1	145847073	145847073	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIST2H2AC	8338	hgsc.bcm.edu	36	1	148125377	148125377	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRPF3	9129	hgsc.bcm.edu	36	1	148564124	148564124	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPRD2	23248	hgsc.bcm.edu	36	1	148710271	148710271	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TARS2	80222	hgsc.bcm.edu	36	1	148735717	148735717	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEMA6C	10500	hgsc.bcm.edu	36	1	149371802	149371802	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POGZ	23126	hgsc.bcm.edu	36	1	149645093	149645093	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SNX27	81609	hgsc.bcm.edu	36	1	149878190	149878190	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
THEM5	284486	hgsc.bcm.edu	36	1	150090245	150090245	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
THEM4	117145	hgsc.bcm.edu	36	1	150128392	150128392	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LCE2B	26239	hgsc.bcm.edu	36	1	150925952	150925952	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPRR2F	6705	hgsc.bcm.edu	36	1	151351774	151351774	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NPR1	4881	hgsc.bcm.edu	36	1	151919786	151919786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC39A1	27173	hgsc.bcm.edu	36	1	152199366	152199366	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP8B2	57198	hgsc.bcm.edu	36	1	152569513	152569513	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PBXIP1	57326	hgsc.bcm.edu	36	1	153185002	153185002	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DCST2	127579	hgsc.bcm.edu	36	1	153272597	153272597	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM46	80128	hgsc.bcm.edu	36	1	153421188	153421188	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEMA4A	64218	hgsc.bcm.edu	36	1	154397783	154397783	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MEF2D	4209	hgsc.bcm.edu	36	1	154717274	154717274	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGEF11	9826	hgsc.bcm.edu	36	1	155220842	155220842	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CD1B	910	hgsc.bcm.edu	36	1	156567420	156567420	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MNDA	4332	hgsc.bcm.edu	36	1	157082395	157082395	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PYHIN1	149628	hgsc.bcm.edu	36	1	157173416	157173416	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PYHIN1	149628	hgsc.bcm.edu	36	1	157173433	157173433	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IFI16	3428	hgsc.bcm.edu	36	1	157288125	157288125	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR10J3	441911	hgsc.bcm.edu	36	1	157550667	157550667	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR10J1	26476	hgsc.bcm.edu	36	1	157676648	157676648	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TAGLN2	8407	hgsc.bcm.edu	36	1	158156795	158156795	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNJ9	3765	hgsc.bcm.edu	36	1	158320670	158320670	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP1A4	480	hgsc.bcm.edu	36	1	158411089	158411089	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAMTS4	9507	hgsc.bcm.edu	36	1	159427802	159427802	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DUSP12	11266	hgsc.bcm.edu	36	1	159993336	159993336	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NUF2	83540	hgsc.bcm.edu	36	1	161573183	161573183	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PBX1	5087	hgsc.bcm.edu	36	1	163028386	163028386	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SELL	6402	hgsc.bcm.edu	36	1	167943146	167943146	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRRC2C	0	hgsc.bcm.edu	36	1	169777628	169777628	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KLHL20	27252	hgsc.bcm.edu	36	1	172011592	172011592	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RABGAP1L	9910	hgsc.bcm.edu	36	1	172454944	172454944	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TNN	63923	hgsc.bcm.edu	36	1	173313306	173313306	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TNN	63923	hgsc.bcm.edu	36	1	173354491	173354491	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TNR	7143	hgsc.bcm.edu	36	1	173601672	173601672	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PAPPA2	60676	hgsc.bcm.edu	36	1	174792938	174792938	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SOAT1	6646	hgsc.bcm.edu	36	1	177571363	177571363	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NPHS2	7827	hgsc.bcm.edu	36	1	177811609	177811609	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TOR1AIP2	163590	hgsc.bcm.edu	36	1	178083341	178083341	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CACNA1E	777	hgsc.bcm.edu	36	1	179957521	179957521	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CACNA1E	777	hgsc.bcm.edu	36	1	179961877	179961877	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RGSL1	353299	hgsc.bcm.edu	36	1	180709753	180709753	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HMCN1	83872	hgsc.bcm.edu	36	1	184145237	184145237	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TPR	7175	hgsc.bcm.edu	36	1	184550473	184550473	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF21B	23046	hgsc.bcm.edu	36	1	199234157	199234157	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF21B	23046	hgsc.bcm.edu	36	1	199240582	199240582	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LMOD1	25802	hgsc.bcm.edu	36	1	200136201	200136201	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LGR6	59352	hgsc.bcm.edu	36	1	200553872	200553872	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLEKHA6	22874	hgsc.bcm.edu	36	1	202503260	202503260	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DYRK3	8444	hgsc.bcm.edu	36	1	204888760	204888760	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIGR	5284	hgsc.bcm.edu	36	1	205179109	205179109	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PFKFB2	5208	hgsc.bcm.edu	36	1	205309398	205309398	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LAMB3	3914	hgsc.bcm.edu	36	1	207865802	207865802	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HSD11B1	3290	hgsc.bcm.edu	36	1	207947023	207947023	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RCOR3	55758	hgsc.bcm.edu	36	1	209529257	209529257	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VASH2	79805	hgsc.bcm.edu	36	1	211212795	211212795	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPS6KC1	26750	hgsc.bcm.edu	36	1	211481323	211481323	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPS6KC1	26750	hgsc.bcm.edu	36	1	211482068	211482068	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPS6KC1	26750	hgsc.bcm.edu	36	1	211482615	211482615	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CENPF	1063	hgsc.bcm.edu	36	1	212881189	212881189	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
USH2A	7399	hgsc.bcm.edu	36	1	213910996	213910996	+	Missense_Mutation	SNP	C	C	T	rs45549044	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
USH2A	7399	hgsc.bcm.edu	36	1	214324736	214324736	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
USH2A	7399	hgsc.bcm.edu	36	1	214430231	214430231	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NVL	4931	hgsc.bcm.edu	36	1	222542201	222542201	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PARP1	142	hgsc.bcm.edu	36	1	224616384	224616384	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PARP1	142	hgsc.bcm.edu	36	1	224619398	224619398	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITPKB	3707	hgsc.bcm.edu	36	1	224896361	224896361	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OBSCN	84033	hgsc.bcm.edu	36	1	226466357	226466357	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OBSCN	84033	hgsc.bcm.edu	36	1	226591631	226591631	+	Missense_Mutation	SNP	G	G	A	rs3795809	byCluster;byFrequency;byHapMap	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OBSCN	84033	hgsc.bcm.edu	36	1	226595521	226595521	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GALNT2	2590	hgsc.bcm.edu	36	1	228451565	228451565	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTC13	79573	hgsc.bcm.edu	36	1	229111122	229111122	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C1orf124	83932	hgsc.bcm.edu	36	1	229550263	229550263	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C1orf124	83932	hgsc.bcm.edu	36	1	229553925	229553925	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DISC1	27185	hgsc.bcm.edu	36	1	229896324	229896324	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SIPA1L2	57568	hgsc.bcm.edu	36	1	230634648	230634648	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1804	84451	hgsc.bcm.edu	36	1	231548933	231548933	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NID1	4811	hgsc.bcm.edu	36	1	234223689	234223689	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NID1	4811	hgsc.bcm.edu	36	1	234294788	234294788	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPR137B	7107	hgsc.bcm.edu	36	1	234372913	234372913	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RYR2	6262	hgsc.bcm.edu	36	1	235684399	235684399	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RYR2	6262	hgsc.bcm.edu	36	1	235885767	235885767	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FMN2	56776	hgsc.bcm.edu	36	1	238438576	238438576	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KMO	8564	hgsc.bcm.edu	36	1	239798428	239798428	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EXO1	9156	hgsc.bcm.edu	36	1	240080411	240080411	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EXO1	9156	hgsc.bcm.edu	36	1	240115379	240115379	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADSS	159	hgsc.bcm.edu	36	1	242681717	242681717	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNST	0	hgsc.bcm.edu	36	1	244877620	244877620	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF669	79862	hgsc.bcm.edu	36	1	245330425	245330425	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF669	79862	hgsc.bcm.edu	36	1	245333934	245333934	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C1orf229	388759	hgsc.bcm.edu	36	1	245341960	245341960	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR2B11	127623	hgsc.bcm.edu	36	1	245681904	245681904	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR1C1	26188	hgsc.bcm.edu	36	1	245987800	245987800	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM58	25893	hgsc.bcm.edu	36	1	246087337	246087337	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR2T6	254879	hgsc.bcm.edu	36	1	246617796	246617796	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF692	55657	hgsc.bcm.edu	36	1	247116734	247116734	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PSMD13	5719	hgsc.bcm.edu	36	11	237372	237372	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDHR5	0	hgsc.bcm.edu	36	11	609122	609122	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DUSP8	1850	hgsc.bcm.edu	36	11	1541719	1541719	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CTSD	1509	hgsc.bcm.edu	36	11	1739189	1739189	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NUP98	4928	hgsc.bcm.edu	36	11	3654029	3654029	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STIM1	6786	hgsc.bcm.edu	36	11	4060102	4060102	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM34	445372	hgsc.bcm.edu	36	11	5610344	5610344	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM5	85363	hgsc.bcm.edu	36	11	5642757	5642757	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR56A3	390083	hgsc.bcm.edu	36	11	5925773	5925773	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM3	10612	hgsc.bcm.edu	36	11	6434364	6434364	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TPP1	65057	hgsc.bcm.edu	36	11	6594620	6594620	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR2AG1	144125	hgsc.bcm.edu	36	11	6763194	6763194	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBMXL2	27288	hgsc.bcm.edu	36	11	7067944	7067944	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPFIBP2	8495	hgsc.bcm.edu	36	11	7612327	7612327	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STK33	65975	hgsc.bcm.edu	36	11	8414214	8414214	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCUBE2	57758	hgsc.bcm.edu	36	11	9025564	9025564	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IPO7	10527	hgsc.bcm.edu	36	11	9418651	9418651	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WEE1	7465	hgsc.bcm.edu	36	11	9554198	9554198	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZBED5	58486	hgsc.bcm.edu	36	11	10832468	10832468	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MICAL2	9645	hgsc.bcm.edu	36	11	12220363	12220363	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIK3C2A	5286	hgsc.bcm.edu	36	11	17147120	17147120	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NAV2	89797	hgsc.bcm.edu	36	11	20083848	20083848	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC6A5	9152	hgsc.bcm.edu	36	11	20630551	20630551	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NELL1	4745	hgsc.bcm.edu	36	11	20925493	20925493	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANO5	203859	hgsc.bcm.edu	36	11	22252867	22252867	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC17A6	57084	hgsc.bcm.edu	36	11	22354787	22354787	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC17A6	57084	hgsc.bcm.edu	36	11	22355730	22355730	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC5A12	159963	hgsc.bcm.edu	36	11	26689469	26689469	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNA4	3739	hgsc.bcm.edu	36	11	29990155	29990155	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf41	25758	hgsc.bcm.edu	36	11	33646120	33646120	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LMO2	4005	hgsc.bcm.edu	36	11	33837482	33837482	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NAT10	55226	hgsc.bcm.edu	36	11	34118633	34118633	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTC17	55761	hgsc.bcm.edu	36	11	43375586	43375586	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTC17	55761	hgsc.bcm.edu	36	11	43392873	43392873	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACCSL	390110	hgsc.bcm.edu	36	11	44031586	44031586	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AMBRA1	55626	hgsc.bcm.edu	36	11	46471833	46471833	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PACSIN3	29763	hgsc.bcm.edu	36	11	47156549	47156549	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CELF1	0	hgsc.bcm.edu	36	11	47451322	47451322	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTPRJ	5795	hgsc.bcm.edu	36	11	48108778	48108778	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR5L2	26338	hgsc.bcm.edu	36	11	55351405	55351405	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR5T2	219464	hgsc.bcm.edu	36	11	55756307	55756307	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR8K1	390157	hgsc.bcm.edu	36	11	55870418	55870418	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR5M3	219482	hgsc.bcm.edu	36	11	55994277	55994277	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VWCE	220001	hgsc.bcm.edu	36	11	60814904	60814904	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf9	745	hgsc.bcm.edu	36	11	61298069	61298069	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf9	745	hgsc.bcm.edu	36	11	61300162	61300162	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AHNAK	79026	hgsc.bcm.edu	36	11	62044254	62044254	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AHNAK	79026	hgsc.bcm.edu	36	11	62052152	62052152	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INTS5	80789	hgsc.bcm.edu	36	11	62172701	62172701	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC22A25	387601	hgsc.bcm.edu	36	11	62753319	62753319	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC22A11	55867	hgsc.bcm.edu	36	11	64086179	64086179	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATG2A	23130	hgsc.bcm.edu	36	11	64438467	64438467	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPP2R5B	5526	hgsc.bcm.edu	36	11	64450873	64450873	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAP3K11	4296	hgsc.bcm.edu	36	11	65123530	65123530	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MUS81	80198	hgsc.bcm.edu	36	11	65389082	65389082	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BANF1	8815	hgsc.bcm.edu	36	11	65527311	65527311	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CD248	57124	hgsc.bcm.edu	36	11	65840683	65840683	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DPP3	10072	hgsc.bcm.edu	36	11	66006437	66006437	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CTSF	8722	hgsc.bcm.edu	36	11	66087993	66087993	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC87	55231	hgsc.bcm.edu	36	11	66114918	66114918	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPTBN2	6712	hgsc.bcm.edu	36	11	66215405	66215405	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf80	79703	hgsc.bcm.edu	36	11	66362433	66362433	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf86	254439	hgsc.bcm.edu	36	11	66500294	66500294	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CABP4	57010	hgsc.bcm.edu	36	11	66982548	66982548	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UNC93B1	81622	hgsc.bcm.edu	36	11	67527165	67527165	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SUV420H1	51111	hgsc.bcm.edu	36	11	67695608	67695608	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYEOV	26579	hgsc.bcm.edu	36	11	68819880	68819880	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF121	55298	hgsc.bcm.edu	36	11	71349475	71349475	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FOLR3	2352	hgsc.bcm.edu	36	11	71528094	71528094	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYO7A	4647	hgsc.bcm.edu	36	11	76590208	76590208	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RSF1	51773	hgsc.bcm.edu	36	11	77089918	77089918	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RSF1	51773	hgsc.bcm.edu	36	11	77090869	77090869	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GAB2	9846	hgsc.bcm.edu	36	11	77638990	77638990	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ODZ4	26011	hgsc.bcm.edu	36	11	78101197	78101197	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYTL2	54843	hgsc.bcm.edu	36	11	85085074	85085074	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC81	60494	hgsc.bcm.edu	36	11	85789417	85789417	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1731	85459	hgsc.bcm.edu	36	11	93102317	93102317	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNTN5	53942	hgsc.bcm.edu	36	11	99567086	99567086	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1377	57562	hgsc.bcm.edu	36	11	101339574	101339574	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BIRC2	329	hgsc.bcm.edu	36	11	101726249	101726249	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MMP3	4314	hgsc.bcm.edu	36	11	102215095	102215095	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CARD16	114769	hgsc.bcm.edu	36	11	104420404	104420404	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATM	472	hgsc.bcm.edu	36	11	107691762	107691762	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATM	472	hgsc.bcm.edu	36	11	107741298	107741298	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf87	399947	hgsc.bcm.edu	36	11	108799744	108799744	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf87	399947	hgsc.bcm.edu	36	11	108799925	108799925	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf57	55216	hgsc.bcm.edu	36	11	111458469	111458469	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HTR3A	3359	hgsc.bcm.edu	36	11	113353751	113353751	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHLDB1	23187	hgsc.bcm.edu	36	11	118021452	118021452	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BCL9L	283149	hgsc.bcm.edu	36	11	118278316	118278316	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPS25	6230	hgsc.bcm.edu	36	11	118393942	118393942	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SORL1	6653	hgsc.bcm.edu	36	11	120896761	120896761	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR6X1	390260	hgsc.bcm.edu	36	11	123130114	123130114	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR8D4	338662	hgsc.bcm.edu	36	11	123282417	123282417	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNJ1	3758	hgsc.bcm.edu	36	11	128214827	128214827	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRDM10	56980	hgsc.bcm.edu	36	11	129319928	129319928	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NCAPD3	23310	hgsc.bcm.edu	36	11	133543135	133543135	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C6orf195	154386	hgsc.bcm.edu	36	6	2568856	2568856	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYLK4	340156	hgsc.bcm.edu	36	6	2624573	2624573	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C6orf145	221749	hgsc.bcm.edu	36	6	3672804	3672804	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIVEP1	3096	hgsc.bcm.edu	36	6	12230600	12230600	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHACTR1	221692	hgsc.bcm.edu	36	6	13314071	13314071	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HDGFL1	154150	hgsc.bcm.edu	36	6	22677861	22677861	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIST1H1E	3008	hgsc.bcm.edu	36	6	26265166	26265166	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HIST1H2BD	3017	hgsc.bcm.edu	36	6	26266508	26266508	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BTN3A3	10384	hgsc.bcm.edu	36	6	26560341	26560341	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPP1R11	6992	hgsc.bcm.edu	36	6	30144996	30144996	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM31	11074	hgsc.bcm.edu	36	6	30186220	30186220	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GNL1	2794	hgsc.bcm.edu	36	6	30622554	30622554	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DHX16	8449	hgsc.bcm.edu	36	6	30746580	30746580	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DDR1	780	hgsc.bcm.edu	36	6	30975022	30975022	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NEU1	4758	hgsc.bcm.edu	36	6	31936946	31936946	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC44A4	80736	hgsc.bcm.edu	36	6	31941084	31941084	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRRT1	80863	hgsc.bcm.edu	36	6	32226171	32226171	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF5	6048	hgsc.bcm.edu	36	6	32255507	32255507	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VPS52	6293	hgsc.bcm.edu	36	6	33326622	33326622	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITPR3	3710	hgsc.bcm.edu	36	6	33768546	33768546	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITPR3	3710	hgsc.bcm.edu	36	6	33768585	33768585	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DAAM2	23500	hgsc.bcm.edu	36	6	39977704	39977704	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MOCS1	4337	hgsc.bcm.edu	36	6	39991793	39991793	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UNC5CL	222643	hgsc.bcm.edu	36	6	41106131	41106131	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GUCA1A	2978	hgsc.bcm.edu	36	6	42255103	42255103	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MRPL14	64928	hgsc.bcm.edu	36	6	44189880	44189880	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC29A1	2030	hgsc.bcm.edu	36	6	44309237	44309237	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RHAG	6005	hgsc.bcm.edu	36	6	49694936	49694936	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ELOVL5	60481	hgsc.bcm.edu	36	6	53248985	53248985	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C6orf142	90523	hgsc.bcm.edu	36	6	54097537	54097537	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HCRTR2	131450	hgsc.bcm.edu	36	6	55147450	55147450	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DST	667	hgsc.bcm.edu	36	6	56545778	56545778	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EYS	346007	hgsc.bcm.edu	36	6	64489206	64489206	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BAI3	577	hgsc.bcm.edu	36	6	70127748	70127748	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OGFRL1	79627	hgsc.bcm.edu	36	6	72062755	72062755	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CD109	135228	hgsc.bcm.edu	36	6	74550211	74550211	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL12A1	1303	hgsc.bcm.edu	36	6	75898384	75898384	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHIP	55023	hgsc.bcm.edu	36	6	79707294	79707294	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM46A	55603	hgsc.bcm.edu	36	6	82516327	82516327	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1009	22832	hgsc.bcm.edu	36	6	84951757	84951757	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CGA	1113	hgsc.bcm.edu	36	6	87852868	87852868	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF292	23036	hgsc.bcm.edu	36	6	88024990	88024990	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASCC3	10973	hgsc.bcm.edu	36	6	101072611	101072611	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCML4	256380	hgsc.bcm.edu	36	6	108172966	108172966	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SMPD2	6610	hgsc.bcm.edu	36	6	109870180	109870180	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FIG4	9896	hgsc.bcm.edu	36	6	110219313	110219313	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NCOA7	135112	hgsc.bcm.edu	36	6	126253537	126253537	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NCOA7	135112	hgsc.bcm.edu	36	6	126253551	126253551	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
L3MBTL3	84456	hgsc.bcm.edu	36	6	130467308	130467308	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARG1	64129	hgsc.bcm.edu	36	6	131939508	131939508	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ENPP1	5167	hgsc.bcm.edu	36	6	132221537	132221537	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MOXD1	26002	hgsc.bcm.edu	36	6	132690890	132690890	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OLIG3	167826	hgsc.bcm.edu	36	6	137856662	137856662	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UTRN	7402	hgsc.bcm.edu	36	6	145198705	145198705	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SHPRH	257218	hgsc.bcm.edu	36	6	146304560	146304560	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RAET1G	353091	hgsc.bcm.edu	36	6	150281929	150281929	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MTHFD1L	25902	hgsc.bcm.edu	36	6	151323167	151323167	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ESR1	2099	hgsc.bcm.edu	36	6	152307159	152307159	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYNE1	23345	hgsc.bcm.edu	36	6	152552122	152552122	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYNE1	23345	hgsc.bcm.edu	36	6	152716487	152716487	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBM16	22828	hgsc.bcm.edu	36	6	155187070	155187070	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAS1	4142	hgsc.bcm.edu	36	6	160247983	160247983	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC22A1	6580	hgsc.bcm.edu	36	6	160475136	160475136	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LPA	4018	hgsc.bcm.edu	36	6	160952584	160952584	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR27	253769	hgsc.bcm.edu	36	6	169806286	169806286	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C6orf70	55780	hgsc.bcm.edu	36	6	169910190	169910190	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYO1C	4643	hgsc.bcm.edu	36	17	1315774	1315774	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYO1C	4643	hgsc.bcm.edu	36	17	1324983	1324983	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA0664	23277	hgsc.bcm.edu	36	17	2552070	2552070	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZZEF1	23140	hgsc.bcm.edu	36	17	3894338	3894338	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GP1BA	2811	hgsc.bcm.edu	36	17	4778093	4778093	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NLRP1	22861	hgsc.bcm.edu	36	17	5403410	5403410	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASGR2	433	hgsc.bcm.edu	36	17	6952842	6952842	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP1B2	482	hgsc.bcm.edu	36	17	7499899	7499899	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PER1	93210	hgsc.bcm.edu	36	17	7986484	7986484	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPDYE4	388333	hgsc.bcm.edu	36	17	8602371	8602371	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIK3R6	146850	hgsc.bcm.edu	36	17	8667472	8667472	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
USP43	124739	hgsc.bcm.edu	36	17	9572014	9572014	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYH8	4626	hgsc.bcm.edu	36	17	10250786	10250786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNAH9	1770	hgsc.bcm.edu	36	17	11452309	11452309	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNAH9	1770	hgsc.bcm.edu	36	17	11612604	11612604	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGAP44	0	hgsc.bcm.edu	36	17	12802882	12802882	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HS3ST3A1	9955	hgsc.bcm.edu	36	17	13445039	13445039	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EVPLL	645027	hgsc.bcm.edu	36	17	18225447	18225447	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FBXW10	10517	hgsc.bcm.edu	36	17	18622644	18622644	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SGK494	124923	hgsc.bcm.edu	36	17	23964281	23964281	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYO18A	399687	hgsc.bcm.edu	36	17	24462646	24462646	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SSH2	85464	hgsc.bcm.edu	36	17	24987886	24987886	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NF1	4763	hgsc.bcm.edu	36	17	26510171	26510171	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NF1	4763	hgsc.bcm.edu	36	17	26580376	26580376	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EVI2B	2124	hgsc.bcm.edu	36	17	26656140	26656140	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PSMD11	5717	hgsc.bcm.edu	36	17	27815667	27815667	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RAD51L3	5892	hgsc.bcm.edu	36	17	30469638	30469638	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UNC45B	146862	hgsc.bcm.edu	36	17	30499412	30499412	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UNC45B	146862	hgsc.bcm.edu	36	17	30506569	30506569	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCL14	6358	hgsc.bcm.edu	36	17	31337720	31337720	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACACA	31	hgsc.bcm.edu	36	17	32623212	32623212	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIP4K2B	8396	hgsc.bcm.edu	36	17	34189289	34189289	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NEUROD2	4761	hgsc.bcm.edu	36	17	35015964	35015964	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ERBB2	2064	hgsc.bcm.edu	36	17	35136614	35136614	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EIF1	10209	hgsc.bcm.edu	36	17	37099894	37099894	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HAP1	9001	hgsc.bcm.edu	36	17	37134753	37134753	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LEPREL4	0	hgsc.bcm.edu	36	17	37220910	37220910	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNTNAP1	8506	hgsc.bcm.edu	36	17	38093447	38093447	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC4A1	6521	hgsc.bcm.edu	36	17	39686142	39686142	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC4A1	6521	hgsc.bcm.edu	36	17	39686190	39686190	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RUNDC3A	10900	hgsc.bcm.edu	36	17	39748200	39748200	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAM11	4185	hgsc.bcm.edu	36	17	40205310	40205310	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAP3K14	9020	hgsc.bcm.edu	36	17	40698366	40698366	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
B4GALNT2	124872	hgsc.bcm.edu	36	17	44602031	44602031	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYST2	11143	hgsc.bcm.edu	36	17	45248247	45248247	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPM1E	22843	hgsc.bcm.edu	36	17	54413066	54413066	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM37	4591	hgsc.bcm.edu	36	17	54460747	54460747	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNFT1	51136	hgsc.bcm.edu	36	17	55389434	55389434	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LIMD2	80774	hgsc.bcm.edu	36	17	59130143	59130143	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TEX2	55852	hgsc.bcm.edu	36	17	59644985	59644985	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARSG	22901	hgsc.bcm.edu	36	17	63928121	63928121	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABCA8	10351	hgsc.bcm.edu	36	17	64402712	64402712	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABCA9	10350	hgsc.bcm.edu	36	17	64551241	64551241	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CPSF4L	642843	hgsc.bcm.edu	36	17	68760450	68760450	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNAI2	64446	hgsc.bcm.edu	36	17	69789594	69789594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNAI2	64446	hgsc.bcm.edu	36	17	69817850	69817850	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RAB37	326624	hgsc.bcm.edu	36	17	70253087	70253087	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARMC7	79637	hgsc.bcm.edu	36	17	70636642	70636642	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA0195	9772	hgsc.bcm.edu	36	17	70999453	70999453	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LLGL2	3993	hgsc.bcm.edu	36	17	71080734	71080734	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EVPL	2125	hgsc.bcm.edu	36	17	71516674	71516674	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AFMID	125061	hgsc.bcm.edu	36	17	73695070	73695070	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PGS1	9489	hgsc.bcm.edu	36	17	73911629	73911629	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNAH17	8632	hgsc.bcm.edu	36	17	73993398	73993398	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNAH17	8632	hgsc.bcm.edu	36	17	74010358	74010358	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GAA	2548	hgsc.bcm.edu	36	17	75699146	75699146	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF213	57674	hgsc.bcm.edu	36	17	75883234	75883234	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AATK	9625	hgsc.bcm.edu	36	17	76711692	76711692	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BAHCC1	57597	hgsc.bcm.edu	36	17	77023755	77023755	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HGS	9146	hgsc.bcm.edu	36	17	77279024	77279024	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SIRT7	51547	hgsc.bcm.edu	36	17	77464994	77464994	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRC45	201255	hgsc.bcm.edu	36	17	77576166	77576166	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FASN	2194	hgsc.bcm.edu	36	17	77639720	77639720	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC57	284001	hgsc.bcm.edu	36	17	77745151	77745151	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSNK1D	1453	hgsc.bcm.edu	36	17	77804209	77804209	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SECTM1	6398	hgsc.bcm.edu	36	17	77876026	77876026	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POTED	317754	hgsc.bcm.edu	36	21	13904455	13904455	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
URB1	9875	hgsc.bcm.edu	36	21	32610696	32610696	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RUNX1	861	hgsc.bcm.edu	36	21	35153651	35153651	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RUNX1	861	hgsc.bcm.edu	36	21	35174748	35174748	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MORC3	23515	hgsc.bcm.edu	36	21	36658405	36658405	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SIM2	6493	hgsc.bcm.edu	36	21	37003363	37003363	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BRWD1	54014	hgsc.bcm.edu	36	21	39558406	39558406	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLAC4	191585	hgsc.bcm.edu	36	21	41473007	41473007	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PKNOX1	5316	hgsc.bcm.edu	36	21	43314555	43314555	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
U2AF1	7307	hgsc.bcm.edu	36	21	43388674	43388674	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C21orf2	755	hgsc.bcm.edu	36	21	44576295	44576295	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITGB2	3689	hgsc.bcm.edu	36	21	45144732	45144732	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL18A1	80781	hgsc.bcm.edu	36	21	45733839	45733839	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL18A1	80781	hgsc.bcm.edu	36	21	45753787	45753787	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DIP2A	23181	hgsc.bcm.edu	36	21	46778951	46778951	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIGQ	9091	hgsc.bcm.edu	36	16	568879	568879	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
JMJD8	339123	hgsc.bcm.edu	36	16	672967	672967	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CACNA1H	8912	hgsc.bcm.edu	36	16	1205357	1205357	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CACNA1H	8912	hgsc.bcm.edu	36	16	1206960	1206960	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TELO2	9894	hgsc.bcm.edu	36	16	1490420	1490420	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IFT140	9742	hgsc.bcm.edu	36	16	1582502	1582502	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAPK8IP3	23162	hgsc.bcm.edu	36	16	1737034	1737034	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAPK8IP3	23162	hgsc.bcm.edu	36	16	1756391	1756391	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TBL3	10607	hgsc.bcm.edu	36	16	1966251	1966251	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF598	90850	hgsc.bcm.edu	36	16	1989085	1989085	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PKD1	5310	hgsc.bcm.edu	36	16	2100274	2100274	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF174	7727	hgsc.bcm.edu	36	16	3394560	3394560	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLX4	0	hgsc.bcm.edu	36	16	3579044	3579044	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CREBBP	1387	hgsc.bcm.edu	36	16	3764599	3764599	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CORO7	79585	hgsc.bcm.edu	36	16	4354674	4354674	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPL	5493	hgsc.bcm.edu	36	16	4883237	4883237	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABAT	18	hgsc.bcm.edu	36	16	8780902	8780902	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C16orf75	116028	hgsc.bcm.edu	36	16	11352078	11352078	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NDE1	54820	hgsc.bcm.edu	36	16	15679194	15679194	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C16orf88	400506	hgsc.bcm.edu	36	16	19633074	19633074	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GP2	2813	hgsc.bcm.edu	36	16	20236185	20236185	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UMOD	7369	hgsc.bcm.edu	36	16	20267423	20267423	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNAH3	55567	hgsc.bcm.edu	36	16	20904406	20904406	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
METTL9	51108	hgsc.bcm.edu	36	16	21536718	21536718	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PALB2	79728	hgsc.bcm.edu	36	16	23549170	23549170	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HS3ST4	9951	hgsc.bcm.edu	36	16	26054910	26054910	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLN3	1201	hgsc.bcm.edu	36	16	28396426	28396426	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATXN2L	11273	hgsc.bcm.edu	36	16	28754837	28754837	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPNS1	83985	hgsc.bcm.edu	36	16	28900364	28900364	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEZ6L2	26470	hgsc.bcm.edu	36	16	29797130	29797130	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SRCAP	10847	hgsc.bcm.edu	36	16	30656958	30656958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRSS36	146547	hgsc.bcm.edu	36	16	31059324	31059324	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARMC5	79798	hgsc.bcm.edu	36	16	31385152	31385152	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LONP2	83752	hgsc.bcm.edu	36	16	46925641	46925641	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF423	23090	hgsc.bcm.edu	36	16	48228500	48228500	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF423	23090	hgsc.bcm.edu	36	16	48228900	48228900	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBL2	5934	hgsc.bcm.edu	36	16	52034102	52034102	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CX3CL1	6376	hgsc.bcm.edu	36	16	55973613	55973613	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POLR2C	5432	hgsc.bcm.edu	36	16	56060654	56060654	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KATNB1	10300	hgsc.bcm.edu	36	16	56347270	56347270	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNOT1	23019	hgsc.bcm.edu	36	16	57148302	57148302	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNOT1	23019	hgsc.bcm.edu	36	16	57148398	57148398	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDH8	1006	hgsc.bcm.edu	36	16	60492628	60492628	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CMTM3	123920	hgsc.bcm.edu	36	16	65199747	65199747	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDH16	1015	hgsc.bcm.edu	36	16	65504679	65504679	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CES3	23491	hgsc.bcm.edu	36	16	65555784	65555784	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
B3GNT9	84752	hgsc.bcm.edu	36	16	65741031	65741031	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRC36	55282	hgsc.bcm.edu	36	16	65918303	65918303	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EDC4	23644	hgsc.bcm.edu	36	16	66473173	66473173	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NRN1L	123904	hgsc.bcm.edu	36	16	66477537	66477537	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HP	10395	hgsc.bcm.edu	36	16	70651860	70651860	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MLKL	197259	hgsc.bcm.edu	36	16	73270331	73270331	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MLKL	197259	hgsc.bcm.edu	36	16	73287002	73287002	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM231	0	hgsc.bcm.edu	36	16	74147236	74147236	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAMTS18	170692	hgsc.bcm.edu	36	16	75880738	75880738	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C16orf61	56942	hgsc.bcm.edu	36	16	79572940	79572940	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRC50	123872	hgsc.bcm.edu	36	16	82760993	82760993	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
JPH3	57338	hgsc.bcm.edu	36	16	86194538	86194538	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF469	84627	hgsc.bcm.edu	36	16	87031524	87031524	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CPNE7	27132	hgsc.bcm.edu	36	16	88190526	88190526	+	Missense_Mutation	SNP	C	C	T	rs3751682	byFrequency	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TYMS	7298	hgsc.bcm.edu	36	18	660769	660769	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
YES1	7525	hgsc.bcm.edu	36	18	714568	714568	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SMCHD1	23347	hgsc.bcm.edu	36	18	2714949	2714949	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SMCHD1	23347	hgsc.bcm.edu	36	18	2740433	2740433	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGAP28	79822	hgsc.bcm.edu	36	18	6880035	6880035	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANKRD12	23253	hgsc.bcm.edu	36	18	9246518	9246518	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPIRE1	56907	hgsc.bcm.edu	36	18	12453379	12453379	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANKRD30B	374860	hgsc.bcm.edu	36	18	14821401	14821401	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C18orf8	29919	hgsc.bcm.edu	36	18	19352914	19352914	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TAF4B	493913	hgsc.bcm.edu	36	18	22119898	22119898	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDH2	1000	hgsc.bcm.edu	36	18	23827483	23827483	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DSC1	1827	hgsc.bcm.edu	36	18	26977748	26977748	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
B4GALT6	9331	hgsc.bcm.edu	36	18	27479340	27479340	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF125	54941	hgsc.bcm.edu	36	18	27852982	27852982	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF138	51444	hgsc.bcm.edu	36	18	27960748	27960748	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOL4	8715	hgsc.bcm.edu	36	18	29963841	29963841	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SETBP1	26040	hgsc.bcm.edu	36	18	40784929	40784929	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PSTPIP2	9050	hgsc.bcm.edu	36	18	41873953	41873953	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SMAD4	4089	hgsc.bcm.edu	36	18	46845845	46845845	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DCC	1630	hgsc.bcm.edu	36	18	49120233	49120233	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALPK2	115701	hgsc.bcm.edu	36	18	54354972	54354972	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALPK2	115701	hgsc.bcm.edu	36	18	54397904	54397904	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIGN	23556	hgsc.bcm.edu	36	18	57976014	57976014	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMX3	54495	hgsc.bcm.edu	36	18	64499254	64499254	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SOCS6	9306	hgsc.bcm.edu	36	18	66143784	66143784	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CBLN2	147381	hgsc.bcm.edu	36	18	68360155	68360155	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNDP2	55748	hgsc.bcm.edu	36	18	70319588	70319588	+	Silent	SNP	G	G	A	rs2303463	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF407	55628	hgsc.bcm.edu	36	18	70473525	70473525	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF407	55628	hgsc.bcm.edu	36	18	70475172	70475172	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HSBP1L1	0	hgsc.bcm.edu	36	18	75829137	75829137	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRN1	57633	hgsc.bcm.edu	36	3	3863030	3863030	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITPR1	3708	hgsc.bcm.edu	36	3	4644561	4644561	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRRT3	285368	hgsc.bcm.edu	36	3	9966286	9966286	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VHL	7428	hgsc.bcm.edu	36	3	10163222	10163222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VHL	7428	hgsc.bcm.edu	36	3	10163253	10163253	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC6A1	6529	hgsc.bcm.edu	36	3	11039046	11039046	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATG7	10533	hgsc.bcm.edu	36	3	11379304	11379304	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYN2	6854	hgsc.bcm.edu	36	3	12207055	12207055	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CAND2	23066	hgsc.bcm.edu	36	3	12831686	12831686	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HDAC11	79885	hgsc.bcm.edu	36	3	13521158	13521158	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC6A6	6533	hgsc.bcm.edu	36	3	14501458	14501458	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COLQ	8292	hgsc.bcm.edu	36	3	15538065	15538065	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SATB1	6304	hgsc.bcm.edu	36	3	18366152	18366152	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EFHB	151651	hgsc.bcm.edu	36	3	19922141	19922141	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UBE2E2	7325	hgsc.bcm.edu	36	3	23516138	23516138	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
THRB	7068	hgsc.bcm.edu	36	3	24160013	24160013	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TOP2B	7155	hgsc.bcm.edu	36	3	25640081	25640081	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STT3B	201595	hgsc.bcm.edu	36	3	31633474	31633474	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OSBPL10	114884	hgsc.bcm.edu	36	3	31749806	31749806	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLASP2	23122	hgsc.bcm.edu	36	3	33700902	33700902	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCN11A	11280	hgsc.bcm.edu	36	3	38913632	38913632	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSRNP1	64651	hgsc.bcm.edu	36	3	39161550	39161550	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYRIP	25924	hgsc.bcm.edu	36	3	40060749	40060749	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPL14	9045	hgsc.bcm.edu	36	3	40477927	40477927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CTNNB1	1499	hgsc.bcm.edu	36	3	41241118	41241118	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ULK4	54986	hgsc.bcm.edu	36	3	41731954	41731954	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SNRK	54861	hgsc.bcm.edu	36	3	43364914	43364914	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF445	353274	hgsc.bcm.edu	36	3	44471804	44471804	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF502	91392	hgsc.bcm.edu	36	3	44738373	44738373	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1143	57456	hgsc.bcm.edu	36	3	44770028	44770028	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SACM1L	22908	hgsc.bcm.edu	36	3	45755368	45755368	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SETD2	29072	hgsc.bcm.edu	36	3	47063048	47063048	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KLHL18	23276	hgsc.bcm.edu	36	3	47349767	47349767	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCAP	22937	hgsc.bcm.edu	36	3	47435157	47435157	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UCN2	90226	hgsc.bcm.edu	36	3	48575366	48575366	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC36	339834	hgsc.bcm.edu	36	3	49269054	49269054	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AMIGO3	386724	hgsc.bcm.edu	36	3	49730941	49730941	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MST1R	4486	hgsc.bcm.edu	36	3	49909843	49909843	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEMA3F	6405	hgsc.bcm.edu	36	3	50195101	50195101	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBM15B	29890	hgsc.bcm.edu	36	3	51405547	51405547	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VPRBP	9730	hgsc.bcm.edu	36	3	51492810	51492810	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PARP3	10039	hgsc.bcm.edu	36	3	51956865	51956865	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPR62	118442	hgsc.bcm.edu	36	3	51964873	51964873	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DUSP7	1849	hgsc.bcm.edu	36	3	52059943	52059943	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STAB1	23166	hgsc.bcm.edu	36	3	52512128	52512128	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITIH1	3697	hgsc.bcm.edu	36	3	52798883	52798883	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASB14	142686	hgsc.bcm.edu	36	3	57285766	57285766	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM3D	131177	hgsc.bcm.edu	36	3	58606296	58606296	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAGI1	154043	hgsc.bcm.edu	36	3	65317619	65317619	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FRMD4B	23150	hgsc.bcm.edu	36	3	69312788	69312788	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDZRN3	23024	hgsc.bcm.edu	36	3	73515782	73515782	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF717	100131827	hgsc.bcm.edu	36	3	75868811	75868811	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ROBO2	6092	hgsc.bcm.edu	36	3	77696929	77696929	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ROBO1	6091	hgsc.bcm.edu	36	3	78789036	78789036	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHMP2B	25978	hgsc.bcm.edu	36	3	87377618	87377618	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR5H15	403274	hgsc.bcm.edu	36	3	99370754	99370754	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYH15	22989	hgsc.bcm.edu	36	3	109697373	109697373	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHLDB2	90102	hgsc.bcm.edu	36	3	113150594	113150594	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR52	55779	hgsc.bcm.edu	36	3	114603250	114603250	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA2018	205717	hgsc.bcm.edu	36	3	114860173	114860173	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGAP31	0	hgsc.bcm.edu	36	3	120617530	120617530	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POLQ	51426	hgsc.bcm.edu	36	3	122686657	122686657	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POLQ	51426	hgsc.bcm.edu	36	3	122711770	122711770	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARGFX	503582	hgsc.bcm.edu	36	3	122787760	122787760	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLXNA1	5361	hgsc.bcm.edu	36	3	128206665	128206665	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TPRA1	0	hgsc.bcm.edu	36	3	128781367	128781367	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EEFSEC	60678	hgsc.bcm.edu	36	3	129542945	129542945	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ISY1	339122	hgsc.bcm.edu	36	3	130358449	130358449	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL6A6	131873	hgsc.bcm.edu	36	3	131850999	131850999	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIK3R4	30849	hgsc.bcm.edu	36	3	131908667	131908667	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MRPL3	11222	hgsc.bcm.edu	36	3	132704292	132704292	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AMOTL2	51421	hgsc.bcm.edu	36	3	135561754	135561754	+	Silent	SNP	C	C	T	rs2241558	byFrequency;byHapMap	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FOXL2	668	hgsc.bcm.edu	36	3	140147822	140147822	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLSTN2	64084	hgsc.bcm.edu	36	3	141606238	141606238	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLSTN2	64084	hgsc.bcm.edu	36	3	141661112	141661112	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM42	287015	hgsc.bcm.edu	36	3	141892626	141892626	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PFN2	5217	hgsc.bcm.edu	36	3	151168957	151168957	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SIAH2	6478	hgsc.bcm.edu	36	3	151943068	151943068	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IGSF10	285313	hgsc.bcm.edu	36	3	152639052	152639052	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPR149	344758	hgsc.bcm.edu	36	3	155629171	155629171	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCHIP1	29970	hgsc.bcm.edu	36	3	161092654	161092654	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BCHE	590	hgsc.bcm.edu	36	3	167030120	167030120	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NCEH1	0	hgsc.bcm.edu	36	3	173836529	173836529	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NAALADL2	254827	hgsc.bcm.edu	36	3	176955771	176955771	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIK3CA	5290	hgsc.bcm.edu	36	3	180400355	180400355	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIK3CA	5290	hgsc.bcm.edu	36	3	180405019	180405019	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP11B	23200	hgsc.bcm.edu	36	3	184118515	184118515	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
YEATS2	55689	hgsc.bcm.edu	36	3	184998506	184998506	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VWA5B2	90113	hgsc.bcm.edu	36	3	185437883	185437883	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ETV5	2119	hgsc.bcm.edu	36	3	187252544	187252544	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TBCCD1	55171	hgsc.bcm.edu	36	3	187754832	187754832	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RTP1	132112	hgsc.bcm.edu	36	3	188400436	188400436	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MUC20	200958	hgsc.bcm.edu	36	3	196938503	196938503	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BDH1	622	hgsc.bcm.edu	36	3	198757696	198757696	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WNK1	65125	hgsc.bcm.edu	36	12	809544	809544	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WNK1	65125	hgsc.bcm.edu	36	12	847371	847371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AKAP3	10566	hgsc.bcm.edu	36	12	4607566	4607566	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANO2	57101	hgsc.bcm.edu	36	12	5557857	5557857	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHD4	1108	hgsc.bcm.edu	36	12	6566868	6566868	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
A2ML1	144568	hgsc.bcm.edu	36	12	8905034	8905034	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHC1	1911	hgsc.bcm.edu	36	12	8965584	8965584	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLEC9A	283420	hgsc.bcm.edu	36	12	10105011	10105011	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPR19	2842	hgsc.bcm.edu	36	12	12706393	12706393	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DERA	51071	hgsc.bcm.edu	36	12	16026634	16026634	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLEKHA5	54477	hgsc.bcm.edu	36	12	19387623	19387623	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLEKHA5	54477	hgsc.bcm.edu	36	12	19402614	19402614	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNJ8	3764	hgsc.bcm.edu	36	12	21810822	21810822	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C12orf77	0	hgsc.bcm.edu	36	12	25040474	25040474	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IFLTD1	160492	hgsc.bcm.edu	36	12	25564159	25564159	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAR2	55711	hgsc.bcm.edu	36	12	29366054	29366054	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ERGIC2	51290	hgsc.bcm.edu	36	12	29385356	29385356	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DENND5B	160518	hgsc.bcm.edu	36	12	31540035	31540035	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C12orf35	55196	hgsc.bcm.edu	36	12	32028192	32028192	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC2A13	114134	hgsc.bcm.edu	36	12	38708504	38708504	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NELL2	4753	hgsc.bcm.edu	36	12	43555318	43555318	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC38A1	81539	hgsc.bcm.edu	36	12	44869109	44869109	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LMBR1L	55716	hgsc.bcm.edu	36	12	47777728	47777728	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KRT85	3891	hgsc.bcm.edu	36	12	51047168	51047168	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KRT85	3891	hgsc.bcm.edu	36	12	51047371	51047371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C12orf10	60314	hgsc.bcm.edu	36	12	51986310	51986310	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C12orf10	60314	hgsc.bcm.edu	36	12	51986779	51986779	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HNRNPA1	3178	hgsc.bcm.edu	36	12	52962233	52962233	+	Nonsense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITGA7	3679	hgsc.bcm.edu	36	12	54383182	54383182	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IKZF4	64375	hgsc.bcm.edu	36	12	54714637	54714637	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANKRD52	283373	hgsc.bcm.edu	36	12	54925583	54925583	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZBTB39	9880	hgsc.bcm.edu	36	12	55683277	55683277	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRP1	10438	hgsc.bcm.edu	36	12	55874733	55874733	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STAC3	246329	hgsc.bcm.edu	36	12	55926898	55926898	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INHBC	3626	hgsc.bcm.edu	36	12	56129601	56129601	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WIF1	11197	hgsc.bcm.edu	36	12	63800502	63800502	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MDM2	4193	hgsc.bcm.edu	36	12	67519429	67519429	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNOT2	4848	hgsc.bcm.edu	36	12	69009559	69009559	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LGR5	8549	hgsc.bcm.edu	36	12	70120338	70120338	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNC2	3747	hgsc.bcm.edu	36	12	73887979	73887979	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KRR1	11103	hgsc.bcm.edu	36	12	74184022	74184022	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYT1	6857	hgsc.bcm.edu	36	12	78203760	78203760	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C12orf29	91298	hgsc.bcm.edu	36	12	86964799	86964799	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLLU1	574028	hgsc.bcm.edu	36	12	91342746	91342746	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C12orf74	338809	hgsc.bcm.edu	36	12	91625586	91625586	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UHRF1BP1L	23074	hgsc.bcm.edu	36	12	98977043	98977043	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UTP20	27340	hgsc.bcm.edu	36	12	100283426	100283426	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DRAM1	55332	hgsc.bcm.edu	36	12	100839131	100839131	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASCL1	429	hgsc.bcm.edu	36	12	101876599	101876599	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHST11	50515	hgsc.bcm.edu	36	12	103675477	103675477	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NUAK1	9891	hgsc.bcm.edu	36	12	104988792	104988792	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WSCD2	9671	hgsc.bcm.edu	36	12	107158266	107158266	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ISCU	23479	hgsc.bcm.edu	36	12	107482058	107482058	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM119	338773	hgsc.bcm.edu	36	12	107509826	107509826	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SVOP	55530	hgsc.bcm.edu	36	12	107835981	107835981	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACACB	32	hgsc.bcm.edu	36	12	108138837	108138837	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UBE3B	89910	hgsc.bcm.edu	36	12	108455693	108455693	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC63	160762	hgsc.bcm.edu	36	12	109829603	109829603	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IQCD	115811	hgsc.bcm.edu	36	12	112117936	112117936	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TBX5	6910	hgsc.bcm.edu	36	12	113278043	113278043	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOS1	340719	hgsc.bcm.edu	36	12	116252911	116252911	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIAP1	51499	hgsc.bcm.edu	36	12	119368534	119368534	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KNTC1	9735	hgsc.bcm.edu	36	12	121638339	121638339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KNTC1	9735	hgsc.bcm.edu	36	12	121641141	121641141	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SETD8	387893	hgsc.bcm.edu	36	12	122441196	122441196	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
P2RX2	22953	hgsc.bcm.edu	36	12	131706149	131706149	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
P2RX2	22953	hgsc.bcm.edu	36	12	131708395	131708395	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POLE	5426	hgsc.bcm.edu	36	12	131712853	131712853	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF26	7574	hgsc.bcm.edu	36	12	132093749	132093749	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MKRN3	7681	hgsc.bcm.edu	36	15	21362462	21362462	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP10A	57194	hgsc.bcm.edu	36	15	23476478	23476478	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RYR3	6263	hgsc.bcm.edu	36	15	31741722	31741722	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACTC1	70	hgsc.bcm.edu	36	15	32871670	32871670	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF770	54989	hgsc.bcm.edu	36	15	33061221	33061221	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C15orf53	400359	hgsc.bcm.edu	36	15	36777889	36777889	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C15orf52	388115	hgsc.bcm.edu	36	15	38416281	38416281	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INO80	54617	hgsc.bcm.edu	36	15	39171601	39171601	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MGA	23269	hgsc.bcm.edu	36	15	39846153	39846153	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLA2G4E	123745	hgsc.bcm.edu	36	15	40067599	40067599	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLA2G4E	123745	hgsc.bcm.edu	36	15	40089622	40089622	+	Missense_Mutation	SNP	G	G	C	rs55746726	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLA2G4F	255189	hgsc.bcm.edu	36	15	40221643	40221643	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CAPN3	825	hgsc.bcm.edu	36	15	40467249	40467249	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTBK2	146057	hgsc.bcm.edu	36	15	40831562	40831562	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCNDBP1	23582	hgsc.bcm.edu	36	15	41269566	41269566	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SERINC4	619189	hgsc.bcm.edu	36	15	41874539	41874539	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR76	79968	hgsc.bcm.edu	36	15	41923502	41923502	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DUOXA2	405753	hgsc.bcm.edu	36	15	43197381	43197381	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DUOX1	53905	hgsc.bcm.edu	36	15	43221587	43221587	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FBN1	2200	hgsc.bcm.edu	36	15	46490595	46490595	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VPS13C	54832	hgsc.bcm.edu	36	15	60025317	60025317	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TLN2	83660	hgsc.bcm.edu	36	15	60816384	60816384	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TLN2	83660	hgsc.bcm.edu	36	15	60841796	60841796	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPG21	51324	hgsc.bcm.edu	36	15	63060362	63060362	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DIS3L	115752	hgsc.bcm.edu	36	15	64405343	64405343	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DIS3L	115752	hgsc.bcm.edu	36	15	64405362	64405362	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LCTL	197021	hgsc.bcm.edu	36	15	64637248	64637248	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LARP6	55323	hgsc.bcm.edu	36	15	68912312	68912312	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYO9A	4649	hgsc.bcm.edu	36	15	70125307	70125307	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HCN4	10021	hgsc.bcm.edu	36	15	71403294	71403294	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ISLR	3671	hgsc.bcm.edu	36	15	72255516	72255516	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STRA6	64220	hgsc.bcm.edu	36	15	72275044	72275044	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C15orf39	56905	hgsc.bcm.edu	36	15	73287947	73287947	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTPN9	5780	hgsc.bcm.edu	36	15	73602572	73602572	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RASGRF1	5923	hgsc.bcm.edu	36	15	77083523	77083523	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAMTSL3	57188	hgsc.bcm.edu	36	15	82496707	82496707	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NTRK3	4916	hgsc.bcm.edu	36	15	86479533	86479533	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HAPLN3	145864	hgsc.bcm.edu	36	15	87225769	87225769	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ST8SIA2	8128	hgsc.bcm.edu	36	15	90788988	90788988	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GYG2	8908	hgsc.bcm.edu	36	X	2788088	2788088	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MXRA5	25878	hgsc.bcm.edu	36	X	3239633	3239633	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NLGN4X	57502	hgsc.bcm.edu	36	X	5831238	5831238	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLCN4	1183	hgsc.bcm.edu	36	X	10141922	10141922	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FRMPD4	9758	hgsc.bcm.edu	36	X	12646189	12646189	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRPS2	5634	hgsc.bcm.edu	36	X	12727411	12727411	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TLR8	51311	hgsc.bcm.edu	36	X	12848802	12848802	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATXN3L	92552	hgsc.bcm.edu	36	X	13247389	13247389	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RAB9A	9367	hgsc.bcm.edu	36	X	13637177	13637177	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GLRA2	2742	hgsc.bcm.edu	36	X	14658484	14658484	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDKL5	6792	hgsc.bcm.edu	36	X	18516142	18516142	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTCHD1	139411	hgsc.bcm.edu	36	X	23307781	23307781	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DMD	1756	hgsc.bcm.edu	36	X	31372664	31372664	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DMD	1756	hgsc.bcm.edu	36	X	32744643	32744643	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM47A	158724	hgsc.bcm.edu	36	X	34058686	34058686	+	Missense_Mutation	SNP	C	C	T	rs45577239	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM47A	158724	hgsc.bcm.edu	36	X	34059868	34059868	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAOB	4129	hgsc.bcm.edu	36	X	43537718	43537718	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC38A5	92745	hgsc.bcm.edu	36	X	48203091	48203091	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR13	64743	hgsc.bcm.edu	36	X	48343668	48343668	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DGKK	139189	hgsc.bcm.edu	36	X	50146300	50146300	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DGKK	139189	hgsc.bcm.edu	36	X	50148272	50148272	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BMP15	9210	hgsc.bcm.edu	36	X	50675581	50675581	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KDM5C	8242	hgsc.bcm.edu	36	X	53239401	53239401	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FGD1	2245	hgsc.bcm.edu	36	X	54490493	54490493	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
APEX2	27301	hgsc.bcm.edu	36	X	55044773	55044773	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KLF8	11279	hgsc.bcm.edu	36	X	56327522	56327522	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MSN	4478	hgsc.bcm.edu	36	X	64866096	64866096	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HEPH	9843	hgsc.bcm.edu	36	X	65395467	65395467	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NLGN3	54413	hgsc.bcm.edu	36	X	70284445	70284445	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NLGN3	54413	hgsc.bcm.edu	36	X	70303809	70303809	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NHSL2	340527	hgsc.bcm.edu	36	X	71276214	71276214	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RLIM	51132	hgsc.bcm.edu	36	X	73730915	73730915	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATRX	546	hgsc.bcm.edu	36	X	76662941	76662941	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATRX	546	hgsc.bcm.edu	36	X	76775527	76775527	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPS6KA6	27330	hgsc.bcm.edu	36	X	83243756	83243756	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HDX	139324	hgsc.bcm.edu	36	X	83616944	83616944	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TSPAN6	7105	hgsc.bcm.edu	36	X	99775648	99775648	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPRASP2	114928	hgsc.bcm.edu	36	X	101857436	101857436	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GLRA4	441509	hgsc.bcm.edu	36	X	102866523	102866523	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TBC1D8B	54885	hgsc.bcm.edu	36	X	105970653	105970653	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VSIG1	340547	hgsc.bcm.edu	36	X	107206043	107206043	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATG4A	115201	hgsc.bcm.edu	36	X	107261230	107261230	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RGAG1	57529	hgsc.bcm.edu	36	X	109584014	109584014	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBMXL3	139804	hgsc.bcm.edu	36	X	114330776	114330776	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBMXL3	139804	hgsc.bcm.edu	36	X	114332315	114332315	+	Silent	SNP	G	G	A	rs5988231	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1210	57481	hgsc.bcm.edu	36	X	118107528	118107528	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
THOC2	57187	hgsc.bcm.edu	36	X	122606401	122606401	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ODZ1	10178	hgsc.bcm.edu	36	X	123345450	123345450	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ODZ1	10178	hgsc.bcm.edu	36	X	123482181	123482181	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SMARCA1	6594	hgsc.bcm.edu	36	X	128477392	128477392	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGAP36	0	hgsc.bcm.edu	36	X	130046036	130046036	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MBNL3	100130541	hgsc.bcm.edu	36	X	131352763	131352763	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM127A	8933	hgsc.bcm.edu	36	X	133994408	133994408	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZIC3	7547	hgsc.bcm.edu	36	X	136477156	136477156	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZIC3	7547	hgsc.bcm.edu	36	X	136477513	136477513	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FMR1NB	158521	hgsc.bcm.edu	36	X	146870693	146870693	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSAG1	158511	hgsc.bcm.edu	36	X	151659465	151659465	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSAG1	158511	hgsc.bcm.edu	36	X	151659469	151659469	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSAG1	158511	hgsc.bcm.edu	36	X	151659472	151659472	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PNCK	139728	hgsc.bcm.edu	36	X	152589179	152589179	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLXNB3	5365	hgsc.bcm.edu	36	X	152693677	152693677	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AVPR2	554	hgsc.bcm.edu	36	X	152824744	152824744	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HCFC1	3054	hgsc.bcm.edu	36	X	152868917	152868917	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLXNA3	55558	hgsc.bcm.edu	36	X	153347257	153347257	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC10A3	8273	hgsc.bcm.edu	36	X	153369633	153369633	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DKC1	1736	hgsc.bcm.edu	36	X	153656738	153656738	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FGFRL1	53834	hgsc.bcm.edu	36	4	1006229	1006229	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CTBP1	1487	hgsc.bcm.edu	36	4	1198228	1198228	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLBP	7884	hgsc.bcm.edu	36	4	1667796	1667796	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFYVE28	57732	hgsc.bcm.edu	36	4	2245663	2245663	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFYVE28	57732	hgsc.bcm.edu	36	4	2308977	2308977	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRPAP1	4043	hgsc.bcm.edu	36	4	3503848	3503848	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STK32B	55351	hgsc.bcm.edu	36	4	5192583	5192583	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABLIM2	84448	hgsc.bcm.edu	36	4	8149869	8149869	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HTRA3	94031	hgsc.bcm.edu	36	4	8358712	8358712	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR1	9948	hgsc.bcm.edu	36	4	9688558	9688558	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BOD1L	259282	hgsc.bcm.edu	36	4	13226131	13226131	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM184B	27146	hgsc.bcm.edu	36	4	17319640	17319640	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NCAPG	64151	hgsc.bcm.edu	36	4	17427999	17427999	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCKAR	886	hgsc.bcm.edu	36	4	26100099	26100099	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARAP2	116984	hgsc.bcm.edu	36	4	35907150	35907150	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RFC1	6573	hgsc.bcm.edu	36	4	38969687	38969687	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LIAS	11019	hgsc.bcm.edu	36	4	39148072	39148072	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCTD8	386617	hgsc.bcm.edu	36	4	44144824	44144824	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GUF1	60558	hgsc.bcm.edu	36	4	44383348	44383348	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C4orf14	84273	hgsc.bcm.edu	36	4	57525329	57525329	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CENPC1	1060	hgsc.bcm.edu	36	4	68053542	68053542	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
YTHDC1	91746	hgsc.bcm.edu	36	4	68862590	68862590	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AMBN	258	hgsc.bcm.edu	36	4	71506589	71506589	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RUFY3	79443	hgsc.bcm.edu	36	4	71891235	71891235	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANKRD17	26057	hgsc.bcm.edu	36	4	74175446	74175446	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AFM	173	hgsc.bcm.edu	36	4	74579969	74579969	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PF4	5196	hgsc.bcm.edu	36	4	75066103	75066103	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FRAS1	80144	hgsc.bcm.edu	36	4	79674627	79674627	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C4orf22	255119	hgsc.bcm.edu	36	4	82085051	82085051	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NKX6-1	4825	hgsc.bcm.edu	36	4	85638369	85638369	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DSPP	1834	hgsc.bcm.edu	36	4	88755584	88755584	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TIGD2	166815	hgsc.bcm.edu	36	4	90254215	90254215	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GRID2	2895	hgsc.bcm.edu	36	4	94655450	94655450	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDLIM5	10611	hgsc.bcm.edu	36	4	95758260	95758260	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADH7	131	hgsc.bcm.edu	36	4	100568057	100568057	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DDIT4L	115265	hgsc.bcm.edu	36	4	101327862	101327862	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC39A8	64116	hgsc.bcm.edu	36	4	103408170	103408170	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANK2	287	hgsc.bcm.edu	36	4	114498481	114498481	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDH10	57575	hgsc.bcm.edu	36	4	134291079	134291079	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDH10	57575	hgsc.bcm.edu	36	4	134292273	134292273	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PABPC4L	132430	hgsc.bcm.edu	36	4	135341048	135341048	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDH18	54510	hgsc.bcm.edu	36	4	138662163	138662163	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UCP1	7350	hgsc.bcm.edu	36	4	141708496	141708496	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TBC1D9	23158	hgsc.bcm.edu	36	4	141802573	141802573	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRBA	987	hgsc.bcm.edu	36	4	151992924	151992924	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM160A1	729830	hgsc.bcm.edu	36	4	152790231	152790231	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FBXW7	55294	hgsc.bcm.edu	36	4	153468960	153468960	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARFIP1	27236	hgsc.bcm.edu	36	4	154013094	154013094	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM198B	0	hgsc.bcm.edu	36	4	159311701	159311701	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM198B	0	hgsc.bcm.edu	36	4	159311808	159311808	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MFAP3L	9848	hgsc.bcm.edu	36	4	171149717	171149717	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAM29	11086	hgsc.bcm.edu	36	4	176135488	176135488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPCS3	60559	hgsc.bcm.edu	36	4	177485351	177485351	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDKN2AIP	55602	hgsc.bcm.edu	36	4	184605304	184605304	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAT1	2195	hgsc.bcm.edu	36	4	187867297	187867297	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIML2	205860	hgsc.bcm.edu	36	4	189255493	189255493	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PXDN	7837	hgsc.bcm.edu	36	2	1631421	1631421	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTC15	51112	hgsc.bcm.edu	36	2	3370666	3370666	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TAF1B	9014	hgsc.bcm.edu	36	2	9977390	9977390	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KLF11	8462	hgsc.bcm.edu	36	2	10105901	10105901	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DDX1	1653	hgsc.bcm.edu	36	2	15670803	15670803	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
APOB	338	hgsc.bcm.edu	36	2	21104860	21104860	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PFN4	375189	hgsc.bcm.edu	36	2	24195951	24195951	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HADHB	3032	hgsc.bcm.edu	36	2	26339826	26339826	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DPYSL5	56896	hgsc.bcm.edu	36	2	27001340	27001340	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAPRE3	22924	hgsc.bcm.edu	36	2	27100492	27100492	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC5A6	8884	hgsc.bcm.edu	36	2	27281863	27281863	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC30A3	7781	hgsc.bcm.edu	36	2	27331687	27331687	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EIF2B4	8890	hgsc.bcm.edu	36	2	27444470	27444470	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C2orf71	388939	hgsc.bcm.edu	36	2	29149725	29149725	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BIRC6	57448	hgsc.bcm.edu	36	2	32593717	32593717	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGEF33	0	hgsc.bcm.edu	36	2	39011870	39011870	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RHOQ	23433	hgsc.bcm.edu	36	2	46656733	46656733	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPR75	10936	hgsc.bcm.edu	36	2	53935016	53935016	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC85A	114800	hgsc.bcm.edu	36	2	56273560	56273560	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
REL	5966	hgsc.bcm.edu	36	2	60997525	60997525	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EHBP1	23301	hgsc.bcm.edu	36	2	62955168	62955168	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AFTPH	54812	hgsc.bcm.edu	36	2	64666065	64666065	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANTXR1	84168	hgsc.bcm.edu	36	2	69326102	69326102	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM136A	84908	hgsc.bcm.edu	36	2	70381596	70381596	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RAB11FIP5	26056	hgsc.bcm.edu	36	2	73156313	73156313	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALMS1	7840	hgsc.bcm.edu	36	2	73530504	73530504	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALMS1	7840	hgsc.bcm.edu	36	2	73653333	73653333	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TPRKB	51002	hgsc.bcm.edu	36	2	73815117	73815117	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DCTN1	1639	hgsc.bcm.edu	36	2	74447099	74447099	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LOXL3	84695	hgsc.bcm.edu	36	2	74616700	74616700	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C2orf3	6936	hgsc.bcm.edu	36	2	75787227	75787227	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PROM2	150696	hgsc.bcm.edu	36	2	95305563	95305563	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NCAPH	23397	hgsc.bcm.edu	36	2	96395349	96395349	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARID5A	10865	hgsc.bcm.edu	36	2	96581325	96581325	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FER1L5	90342	hgsc.bcm.edu	36	2	96719129	96719129	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZAP70	7535	hgsc.bcm.edu	36	2	97707052	97707052	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VWA3B	200403	hgsc.bcm.edu	36	2	98170896	98170896	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNGA3	1261	hgsc.bcm.edu	36	2	98379210	98379210	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CNGA3	1261	hgsc.bcm.edu	36	2	98379650	98379650	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
REV1	51455	hgsc.bcm.edu	36	2	99421716	99421716	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LONRF2	164832	hgsc.bcm.edu	36	2	100267368	100267368	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC9A2	6549	hgsc.bcm.edu	36	2	102691019	102691019	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MALL	7851	hgsc.bcm.edu	36	2	110202543	110202543	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DPP10	57628	hgsc.bcm.edu	36	2	116236627	116236627	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GLI2	2736	hgsc.bcm.edu	36	2	121446064	121446064	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR33	55339	hgsc.bcm.edu	36	2	128180455	128180455	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM168B	130074	hgsc.bcm.edu	36	2	131529400	131529400	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
THSD7B	80731	hgsc.bcm.edu	36	2	138131188	138131188	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRP1B	53353	hgsc.bcm.edu	36	2	141174335	141174335	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PKP4	8502	hgsc.bcm.edu	36	2	159228074	159228074	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TANC1	85461	hgsc.bcm.edu	36	2	159794721	159794721	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCN2A	6326	hgsc.bcm.edu	36	2	165938074	165938074	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
XIRP2	129446	hgsc.bcm.edu	36	2	167811692	167811692	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABCB11	8647	hgsc.bcm.edu	36	2	169555648	169555648	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRP2	4036	hgsc.bcm.edu	36	2	169693814	169693814	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRP2	4036	hgsc.bcm.edu	36	2	169710618	169710618	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TLK1	9874	hgsc.bcm.edu	36	2	171614929	171614929	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DYNC1I2	1781	hgsc.bcm.edu	36	2	172293160	172293160	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SP3	6670	hgsc.bcm.edu	36	2	174483112	174483112	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SP9	100131390	hgsc.bcm.edu	36	2	174910025	174910025	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SP9	100131390	hgsc.bcm.edu	36	2	174910060	174910060	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1715	80856	hgsc.bcm.edu	36	2	176512586	176512586	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HOXD13	3239	hgsc.bcm.edu	36	2	176667556	176667556	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HOXD9	3235	hgsc.bcm.edu	36	2	176695846	176695846	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OSBPL6	114880	hgsc.bcm.edu	36	2	178909301	178909301	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTN	7273	hgsc.bcm.edu	36	2	179108002	179108002	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTN	7273	hgsc.bcm.edu	36	2	179135367	179135367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTN	7273	hgsc.bcm.edu	36	2	179153489	179153489	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTN	7273	hgsc.bcm.edu	36	2	179162504	179162504	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTN	7273	hgsc.bcm.edu	36	2	179189452	179189452	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTN	7273	hgsc.bcm.edu	36	2	179302799	179302799	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTN	7273	hgsc.bcm.edu	36	2	179351884	179351884	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITGAV	3685	hgsc.bcm.edu	36	2	187219726	187219726	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC39A10	57181	hgsc.bcm.edu	36	2	196301188	196301188	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BOLL	66037	hgsc.bcm.edu	36	2	198339552	198339552	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SGOL2	151246	hgsc.bcm.edu	36	2	201115561	201115561	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CASP10	843	hgsc.bcm.edu	36	2	201781132	201781132	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOP58	51602	hgsc.bcm.edu	36	2	202876017	202876017	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCNYL1	151195	hgsc.bcm.edu	36	2	208315201	208315201	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CPS1	1589	hgsc.bcm.edu	36	2	211168519	211168519	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ERBB4	2066	hgsc.bcm.edu	36	2	212361010	212361010	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM134A	79137	hgsc.bcm.edu	36	2	219753078	219753078	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPEG	10290	hgsc.bcm.edu	36	2	220061552	220061552	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INHA	3623	hgsc.bcm.edu	36	2	220145460	220145460	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EPHA4	2043	hgsc.bcm.edu	36	2	222055526	222055526	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PAX3	5077	hgsc.bcm.edu	36	2	222870032	222870032	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACSL3	2181	hgsc.bcm.edu	36	2	223514495	223514495	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNE4	23704	hgsc.bcm.edu	36	2	223625904	223625904	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SERPINE2	5270	hgsc.bcm.edu	36	2	224555736	224555736	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SP100	6672	hgsc.bcm.edu	36	2	231077184	231077184	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHRND	1144	hgsc.bcm.edu	36	2	233099213	233099213	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HDAC4	9759	hgsc.bcm.edu	36	2	239776498	239776498	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANKMY1	51281	hgsc.bcm.edu	36	2	241143098	241143098	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HDLBP	3069	hgsc.bcm.edu	36	2	241850960	241850960	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATG4B	23192	hgsc.bcm.edu	36	2	242256306	242256306	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
D2HGDH	728294	hgsc.bcm.edu	36	2	242332803	242332803	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GAL3ST2	89792	hgsc.bcm.edu	36	2	242391563	242391563	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C2orf85	285093	hgsc.bcm.edu	36	2	242462615	242462615	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KANK1	23189	hgsc.bcm.edu	36	9	735183	735183	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAMTSL1	92949	hgsc.bcm.edu	36	9	18494910	18494910	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAMTSL1	92949	hgsc.bcm.edu	36	9	18877837	18877837	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1797	54914	hgsc.bcm.edu	36	9	20864703	20864703	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IFNA1	3439	hgsc.bcm.edu	36	9	21430949	21430949	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLAA	9373	hgsc.bcm.edu	36	9	26903896	26903896	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VCP	7415	hgsc.bcm.edu	36	9	35051100	35051100	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UNC13B	10497	hgsc.bcm.edu	36	9	35365139	35365139	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GNE	10020	hgsc.bcm.edu	36	9	36236204	36236204	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SHB	6461	hgsc.bcm.edu	36	9	37946046	37946046	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
APBA1	320	hgsc.bcm.edu	36	9	71237301	71237301	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TLE1	7088	hgsc.bcm.edu	36	9	83414962	83414962	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OGN	4969	hgsc.bcm.edu	36	9	94192108	94192108	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OGN	4969	hgsc.bcm.edu	36	9	94195302	94195302	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASPN	54829	hgsc.bcm.edu	36	9	94262670	94262670	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTCH1	5727	hgsc.bcm.edu	36	9	97269293	97269293	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TSTD2	0	hgsc.bcm.edu	36	9	99407613	99407613	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CYLC2	1539	hgsc.bcm.edu	36	9	104807234	104807234	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SMC2	10592	hgsc.bcm.edu	36	9	105927201	105927201	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABCA1	19	hgsc.bcm.edu	36	9	106642498	106642498	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EPB41L4B	54566	hgsc.bcm.edu	36	9	111019215	111019215	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FKBP15	23307	hgsc.bcm.edu	36	9	114986446	114986446	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TLR4	7099	hgsc.bcm.edu	36	9	119516326	119516326	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTGS1	5742	hgsc.bcm.edu	36	9	124183640	124183640	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTGS1	5742	hgsc.bcm.edu	36	9	124188660	124188660	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR1B1	347169	hgsc.bcm.edu	36	9	124430799	124430799	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LHX2	9355	hgsc.bcm.edu	36	9	125823238	125823238	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OLFML2A	169611	hgsc.bcm.edu	36	9	126597223	126597223	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTC16	158248	hgsc.bcm.edu	36	9	129528413	129528413	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPTAN1	6709	hgsc.bcm.edu	36	9	130420208	130420208	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZER1	10444	hgsc.bcm.edu	36	9	130552870	130552870	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ENDOG	2021	hgsc.bcm.edu	36	9	130624670	130624670	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C9orf171	389799	hgsc.bcm.edu	36	9	134364627	134364627	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CEL	1056	hgsc.bcm.edu	36	9	134930414	134930414	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RALGDS	5900	hgsc.bcm.edu	36	9	134965498	134965498	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C9orf96	169436	hgsc.bcm.edu	36	9	135257923	135257923	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VAV2	7410	hgsc.bcm.edu	36	9	135640801	135640801	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CARD9	64170	hgsc.bcm.edu	36	9	138384147	138384147	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LCN8	138307	hgsc.bcm.edu	36	9	138771387	138771387	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM141	85014	hgsc.bcm.edu	36	9	138805645	138805645	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C9orf86	55684	hgsc.bcm.edu	36	9	138853644	138853644	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLIC3	9022	hgsc.bcm.edu	36	9	139009808	139009808	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C9orf173	0	hgsc.bcm.edu	36	9	139266046	139266046	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
XPO4	64328	hgsc.bcm.edu	36	13	20272359	20272359	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SACS	26278	hgsc.bcm.edu	36	13	22840607	22840607	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM123A	219287	hgsc.bcm.edu	36	13	24642147	24642147	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP8A2	51761	hgsc.bcm.edu	36	13	25027152	25027152	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WASF3	10810	hgsc.bcm.edu	36	13	26154963	26154963	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WASF3	10810	hgsc.bcm.edu	36	13	26154972	26154972	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPL21	6144	hgsc.bcm.edu	36	13	26728354	26728354	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MTUS2	0	hgsc.bcm.edu	36	13	28497289	28497289	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MTUS2	0	hgsc.bcm.edu	36	13	28497603	28497603	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FRY	10129	hgsc.bcm.edu	36	13	31647696	31647696	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FRY	10129	hgsc.bcm.edu	36	13	31666298	31666298	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
N4BP2L2	10443	hgsc.bcm.edu	36	13	31994357	31994357	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SOHLH2	54937	hgsc.bcm.edu	36	13	35646962	35646962	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPG20	23111	hgsc.bcm.edu	36	13	35801594	35801594	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRPC4	7223	hgsc.bcm.edu	36	13	37127364	37127364	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COG6	57511	hgsc.bcm.edu	36	13	39195568	39195568	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KBTBD7	84078	hgsc.bcm.edu	36	13	40665284	40665284	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM124A	220108	hgsc.bcm.edu	36	13	50723975	50723975	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TBC1D4	9882	hgsc.bcm.edu	36	13	74759157	74759157	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TBC1D4	9882	hgsc.bcm.edu	36	13	74761149	74761149	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF219	79596	hgsc.bcm.edu	36	13	78088701	78088701	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLITRK6	84189	hgsc.bcm.edu	36	13	85266943	85266943	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SOX21	11166	hgsc.bcm.edu	36	13	94162247	94162247	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IPO5	3843	hgsc.bcm.edu	36	13	97435843	97435843	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NALCN	259232	hgsc.bcm.edu	36	13	100734360	100734360	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ERCC5	2073	hgsc.bcm.edu	36	13	102312822	102312822	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMCO3	55002	hgsc.bcm.edu	36	13	113212698	113212698	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LARP4B	23185	hgsc.bcm.edu	36	10	861227	861227	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PITRM1	10531	hgsc.bcm.edu	36	10	3170509	3170509	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEPHS1	22929	hgsc.bcm.edu	36	10	13420787	13420787	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SUV39H2	79723	hgsc.bcm.edu	36	10	14979192	14979192	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NSUN6	221078	hgsc.bcm.edu	36	10	18945134	18945134	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGAP21	57584	hgsc.bcm.edu	36	10	24924667	24924667	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYO3A	53904	hgsc.bcm.edu	36	10	26395939	26395939	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MASTL	84930	hgsc.bcm.edu	36	10	27484541	27484541	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PARD3	56288	hgsc.bcm.edu	36	10	34711522	34711522	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANKRD30A	91074	hgsc.bcm.edu	36	10	37462913	37462913	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF37A	7587	hgsc.bcm.edu	36	10	38446935	38446935	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RET	5979	hgsc.bcm.edu	36	10	42921913	42921913	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RET	5979	hgsc.bcm.edu	36	10	42933907	42933907	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RET	5979	hgsc.bcm.edu	36	10	42937426	42937426	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHAT	10044	hgsc.bcm.edu	36	10	50503593	50503593	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NCOA4	8031	hgsc.bcm.edu	36	10	51255151	51255151	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BICC1	80114	hgsc.bcm.edu	36	10	60050638	60050638	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RTKN2	219790	hgsc.bcm.edu	36	10	63692439	63692439	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF365	22891	hgsc.bcm.edu	36	10	64085173	64085173	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF365	22891	hgsc.bcm.edu	36	10	64086182	64086182	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EGR2	1959	hgsc.bcm.edu	36	10	64243845	64243845	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HNRNPH3	3189	hgsc.bcm.edu	36	10	69770994	69770994	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRC20	55222	hgsc.bcm.edu	36	10	71731176	71731176	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CBARA1	10367	hgsc.bcm.edu	36	10	73996499	73996499	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTC18	118491	hgsc.bcm.edu	36	10	74739978	74739978	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF503	84858	hgsc.bcm.edu	36	10	76829671	76829671	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDHR1	0	hgsc.bcm.edu	36	10	85964193	85964193	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM190B	0	hgsc.bcm.edu	36	10	86263196	86263196	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTEN	5728	hgsc.bcm.edu	36	10	89682771	89682771	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTEN	5728	hgsc.bcm.edu	36	10	89682820	89682820	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTEN	5728	hgsc.bcm.edu	36	10	89682979	89682979	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDLIM1	9124	hgsc.bcm.edu	36	10	96987806	96987806	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PGAM1	441531	hgsc.bcm.edu	36	10	99180174	99180174	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HPSE2	60495	hgsc.bcm.edu	36	10	100894117	100894117	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNIP2	30819	hgsc.bcm.edu	36	10	103578860	103578860	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NFKB2	4791	hgsc.bcm.edu	36	10	104150219	104150219	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C10orf32	119032	hgsc.bcm.edu	36	10	104610267	104610267	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLK	9748	hgsc.bcm.edu	36	10	105752255	105752255	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C10orf79	80217	hgsc.bcm.edu	36	10	105881904	105881904	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC147	159686	hgsc.bcm.edu	36	10	106118298	106118298	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TCF7L2	6934	hgsc.bcm.edu	36	10	114915323	114915323	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NRAP	65083	hgsc.bcm.edu	36	10	115358207	115358207	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EMX2	2018	hgsc.bcm.edu	36	10	119297657	119297657	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INPP5F	22876	hgsc.bcm.edu	36	10	121572654	121572654	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FGFR2	2263	hgsc.bcm.edu	36	10	123314973	123314973	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HTRA1	5654	hgsc.bcm.edu	36	10	124238503	124238503	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HTRA1	5654	hgsc.bcm.edu	36	10	124239015	124239015	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CTBP2	1488	hgsc.bcm.edu	36	10	126704742	126704742	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM196A	0	hgsc.bcm.edu	36	10	128864459	128864459	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLRN3	119467	hgsc.bcm.edu	36	10	129580818	129580818	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TCERG1L	256536	hgsc.bcm.edu	36	10	132948591	132948591	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KNDC1	85442	hgsc.bcm.edu	36	10	134875291	134875291	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC9A3	6550	hgsc.bcm.edu	36	5	577282	577282	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TPPP	11076	hgsc.bcm.edu	36	5	731027	731027	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADCY2	108	hgsc.bcm.edu	36	5	7826104	7826104	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MTRR	4552	hgsc.bcm.edu	36	5	7931289	7931289	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEMA5A	9037	hgsc.bcm.edu	36	5	9175781	9175781	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCT5	22948	hgsc.bcm.edu	36	5	10316328	10316328	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MARCH6	10299	hgsc.bcm.edu	36	5	10455702	10455702	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DNAH5	1767	hgsc.bcm.edu	36	5	13863303	13863303	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FBXL7	23194	hgsc.bcm.edu	36	5	15989860	15989860	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDH18	1016	hgsc.bcm.edu	36	5	19509284	19509284	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DROSHA	29102	hgsc.bcm.edu	36	5	31485176	31485176	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDZD2	23037	hgsc.bcm.edu	36	5	31835466	31835466	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFR	51663	hgsc.bcm.edu	36	5	32433117	32433117	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RICTOR	253260	hgsc.bcm.edu	36	5	38990670	38990670	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C9	1645	hgsc.bcm.edu	36	5	39324639	39324639	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HEATR7B2	133558	hgsc.bcm.edu	36	5	41041497	41041497	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC152	100129792	hgsc.bcm.edu	36	5	42795036	42795036	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITGA1	3672	hgsc.bcm.edu	36	5	52279036	52279036	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDC20B	166979	hgsc.bcm.edu	36	5	54471933	54471933	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DHX29	54505	hgsc.bcm.edu	36	5	54616938	54616938	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IL31RA	133396	hgsc.bcm.edu	36	5	55248263	55248263	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF180	285671	hgsc.bcm.edu	36	5	63545270	63545270	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCNB1	891	hgsc.bcm.edu	36	5	68506558	68506558	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF366	167465	hgsc.bcm.edu	36	5	71792969	71792969	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM174	134288	hgsc.bcm.edu	36	5	72504934	72504934	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HEXB	3074	hgsc.bcm.edu	36	5	74052036	74052036	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL4A3BP	10087	hgsc.bcm.edu	36	5	74716258	74716258	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
F2R	2149	hgsc.bcm.edu	36	5	76064734	76064734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CKMT2	1160	hgsc.bcm.edu	36	5	80595153	80595153	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATG10	83734	hgsc.bcm.edu	36	5	81510114	81510114	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPR98	84059	hgsc.bcm.edu	36	5	89976369	89976369	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPR98	84059	hgsc.bcm.edu	36	5	90061218	90061218	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARRDC3	57561	hgsc.bcm.edu	36	5	90706610	90706610	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR36	134430	hgsc.bcm.edu	36	5	110456008	110456008	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
APC	324	hgsc.bcm.edu	36	5	112118616	112118616	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MCC	4163	hgsc.bcm.edu	36	5	112851886	112851886	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
YTHDC2	64848	hgsc.bcm.edu	36	5	112897942	112897942	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SEMA6A	57556	hgsc.bcm.edu	36	5	115810838	115810838	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDLIM4	8572	hgsc.bcm.edu	36	5	131635752	131635752	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC22A4	6583	hgsc.bcm.edu	36	5	131704262	131704262	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AFF4	27125	hgsc.bcm.edu	36	5	132298449	132298449	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CXXC5	51523	hgsc.bcm.edu	36	5	139041146	139041146	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHA2	56146	hgsc.bcm.edu	36	5	140156401	140156401	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHA6	56142	hgsc.bcm.edu	36	5	140189436	140189436	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHA8	56140	hgsc.bcm.edu	36	5	140202477	140202477	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHA13	56136	hgsc.bcm.edu	36	5	140243699	140243699	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHB2	56133	hgsc.bcm.edu	36	5	140455599	140455599	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHB3	56132	hgsc.bcm.edu	36	5	140461674	140461674	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHB10	56126	hgsc.bcm.edu	36	5	140553907	140553907	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHB12	56124	hgsc.bcm.edu	36	5	140568846	140568846	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHB15	56121	hgsc.bcm.edu	36	5	140606946	140606946	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHGA1	56114	hgsc.bcm.edu	36	5	140691232	140691232	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHGB3	56102	hgsc.bcm.edu	36	5	140731136	140731136	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHGA6	56109	hgsc.bcm.edu	36	5	140735587	140735587	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHGB7	56099	hgsc.bcm.edu	36	5	140777734	140777734	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHGC3	5098	hgsc.bcm.edu	36	5	140837255	140837255	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA0141	9812	hgsc.bcm.edu	36	5	141298274	141298274	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPINK9	643394	hgsc.bcm.edu	36	5	147698235	147698235	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PPARGC1B	133522	hgsc.bcm.edu	36	5	149205582	149205582	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLIT3	6586	hgsc.bcm.edu	36	5	168611033	168611033	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MSX2	4488	hgsc.bcm.edu	36	5	174088822	174088822	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAF2	23197	hgsc.bcm.edu	36	5	175853834	175853834	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC34A1	6569	hgsc.bcm.edu	36	5	176756349	176756349	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC34A1	6569	hgsc.bcm.edu	36	5	176757576	176757576	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HNRNPAB	3182	hgsc.bcm.edu	36	5	177568982	177568982	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF354A	6940	hgsc.bcm.edu	36	5	178072076	178072076	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF879	0	hgsc.bcm.edu	36	5	178392569	178392569	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF879	0	hgsc.bcm.edu	36	5	178392585	178392585	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAMTS2	9509	hgsc.bcm.edu	36	5	178484696	178484696	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAML1	9794	hgsc.bcm.edu	36	5	179125007	179125007	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TBC1D9B	23061	hgsc.bcm.edu	36	5	179252945	179252945	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BTNL3	10917	hgsc.bcm.edu	36	5	180352655	180352655	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BTNL9	153579	hgsc.bcm.edu	36	5	180405130	180405130	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MCM8	84515	hgsc.bcm.edu	36	20	5887374	5887374	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF16B	55614	hgsc.bcm.edu	36	20	16454735	16454735	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EPHB2	2048	hgsc.bcm.edu	36	1	23095560	23095560	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTPRU	10076	hgsc.bcm.edu	36	1	29522888	29522888	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GNAI3	2773	hgsc.bcm.edu	36	1	109923508	109923508	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRIM45	80263	hgsc.bcm.edu	36	1	117459835	117459835	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MRE11A	4361	hgsc.bcm.edu	36	11	93840625	93840625	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF13A	63971	hgsc.bcm.edu	36	6	17942170	17942170	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C6orf15	29113	hgsc.bcm.edu	36	6	31188049	31188049	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PNLDC1	154197	hgsc.bcm.edu	36	6	160144985	160144985	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LLGL2	3993	hgsc.bcm.edu	36	17	71071006	71071006	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRAPPC10	7109	hgsc.bcm.edu	36	21	44276399	44276399	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NARFL	64428	hgsc.bcm.edu	36	16	723297	723297	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOD2	64127	hgsc.bcm.edu	36	16	49308388	49308388	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POU1F1	5449	hgsc.bcm.edu	36	3	87393111	87393111	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SENP7	57337	hgsc.bcm.edu	36	3	102566366	102566366	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HCLS1	3059	hgsc.bcm.edu	36	3	122838027	122838027	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C3orf58	205428	hgsc.bcm.edu	36	3	145175096	145175096	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ECT2	1894	hgsc.bcm.edu	36	3	173960749	173960749	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SRSF2IP	0	hgsc.bcm.edu	36	12	44644155	44644155	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC158	339965	hgsc.bcm.edu	36	4	77491171	77491171	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GUCY1A3	2982	hgsc.bcm.edu	36	4	156851142	156851142	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM123C	205147	hgsc.bcm.edu	36	2	131236095	131236095	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL6A3	1293	hgsc.bcm.edu	36	2	237915445	237915445	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL27A1	85301	hgsc.bcm.edu	36	9	115998115	115998115	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYCBP2	23077	hgsc.bcm.edu	36	13	76529120	76529120	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NFKB2	4791	hgsc.bcm.edu	36	10	104150926	104150926	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPL22	6146	hgsc.bcm.edu	36	1	6180371	6180372	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
APITD1-CORT	0	hgsc.bcm.edu	36	1	10434161	10434162	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FBLIM1	54751	hgsc.bcm.edu	36	1	15976349	15976350	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NBL1	4681	hgsc.bcm.edu	36	1	19856175	19856175	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM57	55219	hgsc.bcm.edu	36	1	25647962	25647962	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDTC1	23038	hgsc.bcm.edu	36	1	27493695	27493695	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DCDC2B	149069	hgsc.bcm.edu	36	1	32450371	32450372	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZMYM4	9202	hgsc.bcm.edu	36	1	35631878	35631879	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAP7D1	55700	hgsc.bcm.edu	36	1	36416117	36416117	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSF3R	1441	hgsc.bcm.edu	36	1	36707910	36707910	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTCH2	8643	hgsc.bcm.edu	36	1	45060780	45060781	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KNCN	148930	hgsc.bcm.edu	36	1	46786003	46786003	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPE65	6121	hgsc.bcm.edu	36	1	68676519	68676519	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRC7	57554	hgsc.bcm.edu	36	1	70224554	70224554	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NTNG1	84628	hgsc.bcm.edu	36	1	107668871	107668871	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CD58	965	hgsc.bcm.edu	36	1	116880185	116880185	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BCL9	607	hgsc.bcm.edu	36	1	145558124	145558125	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GABPB2	126626	hgsc.bcm.edu	36	1	149357274	149357275	+	Frame_Shift_Ins	INS	-	-	AG	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIP5K1A	8394	hgsc.bcm.edu	36	1	149473538	149473538	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCNN3	3782	hgsc.bcm.edu	36	1	153108730	153108730	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SHC1	6464	hgsc.bcm.edu	36	1	153205514	153205514	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SHC1	6464	hgsc.bcm.edu	36	1	153209535	153209535	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASH1L	55870	hgsc.bcm.edu	36	1	153594050	153594051	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OR6P1	128366	hgsc.bcm.edu	36	1	156799923	156799923	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABL2	27	hgsc.bcm.edu	36	1	177350661	177350662	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C1orf14	81626	hgsc.bcm.edu	36	1	181175303	181175304	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CFHR5	81494	hgsc.bcm.edu	36	1	195213466	195213466	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLEKHA6	22874	hgsc.bcm.edu	36	1	202495034	202495034	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SMYD2	56950	hgsc.bcm.edu	36	1	212521285	212521285	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MIA3	375056	hgsc.bcm.edu	36	1	220867682	220867682	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DISC1	27185	hgsc.bcm.edu	36	1	229897140	229897140	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1804	84451	hgsc.bcm.edu	36	1	231581513	231581513	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBM34	23029	hgsc.bcm.edu	36	1	233390570	233390570	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GGPS1	9453	hgsc.bcm.edu	36	1	233572536	233572536	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CEP170	9859	hgsc.bcm.edu	36	1	241429005	241429005	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TAF1B	9014	hgsc.bcm.edu	36	2	9907022	9907022	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SMC6	79677	hgsc.bcm.edu	36	2	17761607	17761607	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC4A1AP	22950	hgsc.bcm.edu	36	2	27740577	27740577	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MTIF2	4528	hgsc.bcm.edu	36	2	55334765	55334765	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP6V1B1	525	hgsc.bcm.edu	36	2	71045081	71045081	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTCD3	55037	hgsc.bcm.edu	36	2	86186931	86186932	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAHD2B	151313	hgsc.bcm.edu	36	2	97113452	97113452	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
REV1	51455	hgsc.bcm.edu	36	2	99421534	99421534	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RFX8	0	hgsc.bcm.edu	36	2	101405322	101405323	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IL18RAP	8807	hgsc.bcm.edu	36	2	102406713	102406713	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR33	55339	hgsc.bcm.edu	36	2	128180587	128180587	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
THSD7B	80731	hgsc.bcm.edu	36	2	137634402	137634402	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRP1B	53353	hgsc.bcm.edu	36	2	140832128	140832129	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACVR2A	92	hgsc.bcm.edu	36	2	148400156	148400156	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944295	+	Frame_Shift_Del	DEL	AAAA	AAAA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AAAA	AAAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RIF1	55791	hgsc.bcm.edu	36	2	152028787	152028787	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NR4A2	4929	hgsc.bcm.edu	36	2	156894357	156894357	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TANC1	85461	hgsc.bcm.edu	36	2	159751748	159751749	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCN7A	6332	hgsc.bcm.edu	36	2	167042219	167042220	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRP2	4036	hgsc.bcm.edu	36	2	169705270	169705271	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLEKHA3	65977	hgsc.bcm.edu	36	2	179068506	179068507	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CALCRL	10203	hgsc.bcm.edu	36	2	187958520	187958520	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STK17B	9262	hgsc.bcm.edu	36	2	196729469	196729469	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BMPR2	659	hgsc.bcm.edu	36	2	203128375	203128375	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZDBF2	57683	hgsc.bcm.edu	36	2	206882673	206882673	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SP110	3431	hgsc.bcm.edu	36	2	230780962	230780962	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCLY	51540	hgsc.bcm.edu	36	2	238641501	238641501	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ESPNL	339768	hgsc.bcm.edu	36	2	238704037	238704037	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SETMAR	6419	hgsc.bcm.edu	36	3	4329769	4329769	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GRM7	2917	hgsc.bcm.edu	36	3	7596013	7596013	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC6A6	6533	hgsc.bcm.edu	36	3	14460314	14460322	+	In_Frame_Del	DEL	CGGCTTCGT	CGGCTTCGT	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	CGGCTTCGT	CGGCTTCGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CMC1	152100	hgsc.bcm.edu	36	3	28336091	28336092	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NKTR	4820	hgsc.bcm.edu	36	3	42654490	42654490	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C3orf77	375337	hgsc.bcm.edu	36	3	44283553	44283554	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF660	285349	hgsc.bcm.edu	36	3	44611247	44611247	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF15	56992	hgsc.bcm.edu	36	3	44818303	44818303	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL7A1	1294	hgsc.bcm.edu	36	3	48587875	48587875	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
USP19	10869	hgsc.bcm.edu	36	3	49120898	49120898	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TWF2	11344	hgsc.bcm.edu	36	3	52240549	52240549	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FLNB	2317	hgsc.bcm.edu	36	3	58064827	58064828	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ROBO2	6092	hgsc.bcm.edu	36	3	77739728	77739728	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HTR1F	3355	hgsc.bcm.edu	36	3	88123579	88123579	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GTPBP8	29083	hgsc.bcm.edu	36	3	114192712	114192712	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GAP43	2596	hgsc.bcm.edu	36	3	116877554	116877554	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EAF2	55929	hgsc.bcm.edu	36	3	123056349	123056349	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ILDR1	286676	hgsc.bcm.edu	36	3	123194929	123194929	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
XRN1	54464	hgsc.bcm.edu	36	3	143625099	143625099	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCOLCE2	26577	hgsc.bcm.edu	36	3	144031276	144031276	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AGTR1	185	hgsc.bcm.edu	36	3	149942225	149942225	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FXR1	8087	hgsc.bcm.edu	36	3	182148922	182148922	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BCL6	604	hgsc.bcm.edu	36	3	188929929	188929930	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIGZ	80235	hgsc.bcm.edu	36	3	198158756	198158757	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM193A	0	hgsc.bcm.edu	36	4	2631391	2631391	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LYAR	55646	hgsc.bcm.edu	36	4	4326273	4326273	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LIMCH1	22998	hgsc.bcm.edu	36	4	41343265	41343266	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	GA	GA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRRC66	339977	hgsc.bcm.edu	36	4	52564152	52564152	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EXOC1	55763	hgsc.bcm.edu	36	4	56463392	56463392	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
USO1	8615	hgsc.bcm.edu	36	4	76922923	76922924	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C4orf22	255119	hgsc.bcm.edu	36	4	82010278	82010278	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HELQ	113510	hgsc.bcm.edu	36	4	84593608	84593608	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EMCN	51705	hgsc.bcm.edu	36	4	101563236	101563236	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARSJ	79642	hgsc.bcm.edu	36	4	115042943	115042943	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRAM1L1	133022	hgsc.bcm.edu	36	4	118225962	118225962	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SCLT1	132320	hgsc.bcm.edu	36	4	130083613	130083613	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTC29	83894	hgsc.bcm.edu	36	4	147974484	147974487	+	Frame_Shift_Del	DEL	AGTA	AGTA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AGTA	AGTA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STOX2	56977	hgsc.bcm.edu	36	4	185167773	185167774	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC110	256309	hgsc.bcm.edu	36	4	186617403	186617403	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TAS2R1	50834	hgsc.bcm.edu	36	5	9683024	9683024	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDH10	1008	hgsc.bcm.edu	36	5	24570981	24570981	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPEF2	79925	hgsc.bcm.edu	36	5	35741651	35741651	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NIPBL	25836	hgsc.bcm.edu	36	5	37020840	37020840	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C9	1645	hgsc.bcm.edu	36	5	39347230	39347230	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCNO	10309	hgsc.bcm.edu	36	5	54564857	54564861	+	Frame_Shift_Del	DEL	GGGCA	GGGCA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	GGGCA	GGGCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MIER3	166968	hgsc.bcm.edu	36	5	56255524	56255524	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLK2	10769	hgsc.bcm.edu	36	5	57788769	57788769	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZSWIM6	57688	hgsc.bcm.edu	36	5	60857972	60857972	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAST4	375449	hgsc.bcm.edu	36	5	66496128	66496128	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BDP1	55814	hgsc.bcm.edu	36	5	70801989	70801989	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AGGF1	55109	hgsc.bcm.edu	36	5	76394723	76394723	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFYVE16	9765	hgsc.bcm.edu	36	5	79791026	79791026	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MEF2C	4208	hgsc.bcm.edu	36	5	88092605	88092605	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPR98	84059	hgsc.bcm.edu	36	5	90077270	90077270	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHAX	51808	hgsc.bcm.edu	36	5	125967611	125967611	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC22A5	6584	hgsc.bcm.edu	36	5	131750630	131750630	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RAD50	10111	hgsc.bcm.edu	36	5	131972281	131972281	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FSTL4	23105	hgsc.bcm.edu	36	5	132562716	132562716	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDKL3	51265	hgsc.bcm.edu	36	5	133662248	133662248	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
H2AFY	9555	hgsc.bcm.edu	36	5	134752605	134752605	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCDHA5	56143	hgsc.bcm.edu	36	5	140183967	140183967	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBM27	54439	hgsc.bcm.edu	36	5	145627513	145627513	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPINK7	84651	hgsc.bcm.edu	36	5	147673149	147673149	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTTG1	9232	hgsc.bcm.edu	36	5	159781975	159781975	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HMMR	3161	hgsc.bcm.edu	36	5	162850004	162850004	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARL10	285598	hgsc.bcm.edu	36	5	175728512	175728513	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPRIN1	114787	hgsc.bcm.edu	36	5	175958730	175958753	+	In_Frame_Del	DEL	AAGACCCAGGATCCTCCTTCCTCG	AAGACCCAGGATCCTCCTTCCTCG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AAGACCCAGGATCCTCCTTCCTCG	AAGACCCAGGATCCTCCTTCCTCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRPF4B	8899	hgsc.bcm.edu	36	6	3976880	3976880	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOL7	51406	hgsc.bcm.edu	36	6	13728971	13728971	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DTNBP1	84062	hgsc.bcm.edu	36	6	15632759	15632763	+	Frame_Shift_Del	DEL	TTCTC	TTCTC	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	TTCTC	TTCTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NHLRC1	378884	hgsc.bcm.edu	36	6	18230204	18230205	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
E2F3	1871	hgsc.bcm.edu	36	6	20589433	20589434	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DPCR1	135656	hgsc.bcm.edu	36	6	31024682	31024682	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDSN	1041	hgsc.bcm.edu	36	6	31196146	31196146	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C6orf27	80737	hgsc.bcm.edu	36	6	31842932	31842932	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PSMB8	5696	hgsc.bcm.edu	36	6	32919721	32919721	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VPS52	6293	hgsc.bcm.edu	36	6	33340150	33340150	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UHRF1BP1	54887	hgsc.bcm.edu	36	6	34947347	34947347	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C6orf108	10591	hgsc.bcm.edu	36	6	43302093	43302093	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTBK1	84630	hgsc.bcm.edu	36	6	43358606	43358606	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HSP90AB1	3326	hgsc.bcm.edu	36	6	44327897	44327899	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYO6	4646	hgsc.bcm.edu	36	6	76656578	76656578	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CYB5R4	51167	hgsc.bcm.edu	36	6	84690950	84690950	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1009	22832	hgsc.bcm.edu	36	6	84952952	84952952	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ASCC3	10973	hgsc.bcm.edu	36	6	101403057	101403057	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AKAP7	9465	hgsc.bcm.edu	36	6	131522969	131522969	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHACTR2	9749	hgsc.bcm.edu	36	6	144128438	144128439	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C6orf103	79747	hgsc.bcm.edu	36	6	147178020	147178020	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
THSD7A	221981	hgsc.bcm.edu	36	7	11549115	11549115	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NPVF	64111	hgsc.bcm.edu	36	7	25233102	25233103	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FKBP9	11328	hgsc.bcm.edu	36	7	33002395	33002395	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
POLM	27434	hgsc.bcm.edu	36	7	44086939	44086939	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ABCA13	154664	hgsc.bcm.edu	36	7	48284140	48284141	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PCLO	27445	hgsc.bcm.edu	36	7	82422376	82422376	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MGC26647	219557	hgsc.bcm.edu	36	7	88262127	88262127	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C7orf63	79846	hgsc.bcm.edu	36	7	89767124	89767124	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FBXO24	26261	hgsc.bcm.edu	36	7	100025225	100025225	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GIGYF1	64599	hgsc.bcm.edu	36	7	100123106	100123106	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC12A9	56996	hgsc.bcm.edu	36	7	100290296	100290296	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AP1S1	1174	hgsc.bcm.edu	36	7	100589125	100589125	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NAPEPLD	222236	hgsc.bcm.edu	36	7	102547359	102547359	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FLNC	2318	hgsc.bcm.edu	36	7	128284057	128284057	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRGUK	136332	hgsc.bcm.edu	36	7	133557195	133557196	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDR91	29062	hgsc.bcm.edu	36	7	134541230	134541230	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZC3HAV1	56829	hgsc.bcm.edu	36	7	138424919	138424919	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GIMAP8	155038	hgsc.bcm.edu	36	7	149795164	149795165	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOS3	342977	hgsc.bcm.edu	36	7	150329331	150329331	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATG9B	285973	hgsc.bcm.edu	36	7	150352151	150352151	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MLL3	58508	hgsc.bcm.edu	36	7	151479539	151479540	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ERICH1	157697	hgsc.bcm.edu	36	8	613865	613865	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DOCK5	80005	hgsc.bcm.edu	36	8	25238806	25238806	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF395	55893	hgsc.bcm.edu	36	8	28266728	28266728	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TEX15	56154	hgsc.bcm.edu	36	8	30823058	30823058	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRPA1	8989	hgsc.bcm.edu	36	8	73121346	73121346	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UBR5	51366	hgsc.bcm.edu	36	8	103358525	103358525	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSMD3	114788	hgsc.bcm.edu	36	8	113310205	113310205	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATAD2	29028	hgsc.bcm.edu	36	8	124437866	124437866	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHF20L1	51105	hgsc.bcm.edu	36	8	133896091	133896091	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EEF1D	1936	hgsc.bcm.edu	36	8	144743135	144743135	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PARP10	84875	hgsc.bcm.edu	36	8	145131635	145131635	+	Frame_Shift_Del	DEL	C	C	-	rs34804171	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ERMP1	79956	hgsc.bcm.edu	36	9	5791292	5791292	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAMTSL1	92949	hgsc.bcm.edu	36	9	18670350	18670350	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TJP2	9414	hgsc.bcm.edu	36	9	71017333	71017333	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WNK2	65268	hgsc.bcm.edu	36	9	95059126	95059126	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PTCH1	5727	hgsc.bcm.edu	36	9	97249438	97249438	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INVS	27130	hgsc.bcm.edu	36	9	102094804	102094804	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZFP37	7539	hgsc.bcm.edu	36	9	114846237	114846237	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TNC	7134	hgsc.bcm.edu	36	9	116837360	116837360	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDK5RAP2	55755	hgsc.bcm.edu	36	9	122260686	122260687	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DAB2IP	153090	hgsc.bcm.edu	36	9	123576458	123576458	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GOLGA2	2801	hgsc.bcm.edu	36	9	130059210	130059211	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TTF1	7270	hgsc.bcm.edu	36	9	134267022	134267023	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
REXO4	57109	hgsc.bcm.edu	36	9	135261970	135261972	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAN1B1	11253	hgsc.bcm.edu	36	9	139115369	139115369	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LARP4B	23185	hgsc.bcm.edu	36	10	848938	848939	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LARP4B	23185	hgsc.bcm.edu	36	10	880939	880939	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OPTN	10133	hgsc.bcm.edu	36	10	13191197	13191198	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SVIL	6840	hgsc.bcm.edu	36	10	29861638	29861638	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1462	57608	hgsc.bcm.edu	36	10	30357568	30357568	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FRMPD2	143162	hgsc.bcm.edu	36	10	49065269	49065270	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
WDFY4	57705	hgsc.bcm.edu	36	10	49653826	49653827	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TFAM	7019	hgsc.bcm.edu	36	10	59818576	59818576	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC16A9	220963	hgsc.bcm.edu	36	10	61084186	61084186	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF365	22891	hgsc.bcm.edu	36	10	63829519	63829519	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RUFY2	55680	hgsc.bcm.edu	36	10	69826588	69826589	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANXA11	311	hgsc.bcm.edu	36	10	81918983	81918984	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RGR	5995	hgsc.bcm.edu	36	10	85998674	85998675	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IDE	3416	hgsc.bcm.edu	36	10	94233024	94233025	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SH3PXD2A	9644	hgsc.bcm.edu	36	10	105351679	105351679	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL17A1	1308	hgsc.bcm.edu	36	10	105809438	105809438	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C11orf35	256329	hgsc.bcm.edu	36	11	546520	546520	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALX4	60529	hgsc.bcm.edu	36	11	44243200	44243200	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARFGAP2	84364	hgsc.bcm.edu	36	11	47153429	47153429	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AGBL2	79841	hgsc.bcm.edu	36	11	47645736	47645736	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPRYD5	84767	hgsc.bcm.edu	36	11	55410186	55410186	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TMEM132A	54972	hgsc.bcm.edu	36	11	60456109	60456110	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SF1	7536	hgsc.bcm.edu	36	11	64291079	64291081	+	In_Frame_Del	DEL	GGC	GGC	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	GGC	GGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SNX15	29907	hgsc.bcm.edu	36	11	64556580	64556580	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LRFN4	78999	hgsc.bcm.edu	36	11	66383900	66383900	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UBTFL1	642623	hgsc.bcm.edu	36	11	89459536	89459537	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KDM4D	55693	hgsc.bcm.edu	36	11	94370455	94370455	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MMP10	4319	hgsc.bcm.edu	36	11	102155605	102155605	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGAP20	57569	hgsc.bcm.edu	36	11	110088146	110088146	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BCL9L	283149	hgsc.bcm.edu	36	11	118278308	118278308	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DPAGT1	1798	hgsc.bcm.edu	36	11	118474353	118474353	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDZD3	79849	hgsc.bcm.edu	36	11	118563545	118563545	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHEK1	1111	hgsc.bcm.edu	36	11	125004344	125004344	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SRPR	6734	hgsc.bcm.edu	36	11	125642297	125642297	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IGSF9B	22997	hgsc.bcm.edu	36	11	133313036	133313037	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FGF23	8074	hgsc.bcm.edu	36	12	4349940	4349940	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DYRK4	8798	hgsc.bcm.edu	36	12	4589623	4589623	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C1S	716	hgsc.bcm.edu	36	12	7048199	7048200	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STRAP	153443	hgsc.bcm.edu	36	12	15938282	15938282	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDE3A	5139	hgsc.bcm.edu	36	12	20413990	20413990	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA0528	9847	hgsc.bcm.edu	36	12	22557546	22557546	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAR2	55711	hgsc.bcm.edu	36	12	29341377	29341377	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALG10B	144245	hgsc.bcm.edu	36	12	37000740	37000740	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIF21A	55605	hgsc.bcm.edu	36	12	38000051	38000051	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ESPL1	9700	hgsc.bcm.edu	36	12	51963296	51963296	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ITGA5	3678	hgsc.bcm.edu	36	12	53085247	53085247	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BAZ2A	11176	hgsc.bcm.edu	36	12	55286067	55286067	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
B4GALNT1	2583	hgsc.bcm.edu	36	12	56311369	56311370	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ELK3	2004	hgsc.bcm.edu	36	12	95165515	95165515	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM71C	196472	hgsc.bcm.edu	36	12	98566484	98566485	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UTP20	27340	hgsc.bcm.edu	36	12	100204288	100204288	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TAOK3	51347	hgsc.bcm.edu	36	12	117123539	117123540	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HNF1A	6927	hgsc.bcm.edu	36	12	119916498	119916498	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SETD1B	23067	hgsc.bcm.edu	36	12	120745627	120745627	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CLIP1	6249	hgsc.bcm.edu	36	12	121405005	121405006	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARL6IP4	51329	hgsc.bcm.edu	36	12	122032246	122032248	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NHLRC3	387921	hgsc.bcm.edu	36	13	38514262	38514262	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EBPL	84650	hgsc.bcm.edu	36	13	49133210	49133210	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TEP1	7011	hgsc.bcm.edu	36	14	19918447	19918447	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
AP1G2	8906	hgsc.bcm.edu	36	14	23099392	23099392	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HECTD1	25831	hgsc.bcm.edu	36	14	30689098	30689099	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BAZ1A	11177	hgsc.bcm.edu	36	14	34300731	34300731	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C14orf106	55320	hgsc.bcm.edu	36	14	44786044	44786044	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACTR10	55860	hgsc.bcm.edu	36	14	57768663	57768663	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA0586	9786	hgsc.bcm.edu	36	14	58002451	58002451	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SYNE2	23224	hgsc.bcm.edu	36	14	63554178	63554178	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UPF0639	0	hgsc.bcm.edu	36	14	69036632	69036632	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LTBP2	4054	hgsc.bcm.edu	36	14	74037360	74037360	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MLH3	27030	hgsc.bcm.edu	36	14	74585576	74585577	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	GA	GA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
VASH1	22846	hgsc.bcm.edu	36	14	76298924	76298924	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLA2G4E	123745	hgsc.bcm.edu	36	15	40089629	40089630	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	CA	CA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAP1A	4130	hgsc.bcm.edu	36	15	41602204	41602204	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
STRC	161497	hgsc.bcm.edu	36	15	41693777	41693777	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDIA3	2923	hgsc.bcm.edu	36	15	41845010	41845011	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C15orf48	84419	hgsc.bcm.edu	36	15	43511571	43511571	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC12A1	6557	hgsc.bcm.edu	36	15	46314435	46314435	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PIGB	9488	hgsc.bcm.edu	36	15	53418795	53418795	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF111	54778	hgsc.bcm.edu	36	15	57110996	57110997	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LDHAL6B	92483	hgsc.bcm.edu	36	15	57287072	57287073	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF609	23060	hgsc.bcm.edu	36	15	62754300	62754300	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IGDCC4	57722	hgsc.bcm.edu	36	15	63468293	63468293	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ADAMTS7	11173	hgsc.bcm.edu	36	15	76847585	76847585	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA1024	23251	hgsc.bcm.edu	36	15	77537641	77537641	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MESDC2	23184	hgsc.bcm.edu	36	15	79058688	79058688	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C15orf40	123207	hgsc.bcm.edu	36	15	81468275	81468277	+	In_Frame_Del	DEL	AAA	AAA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AAA	AAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHD2	1106	hgsc.bcm.edu	36	15	91281823	91281823	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CHD2	1106	hgsc.bcm.edu	36	15	91341320	91341320	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IGF1R	3480	hgsc.bcm.edu	36	15	97260332	97260332	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HAGHL	84264	hgsc.bcm.edu	36	16	718929	718929	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GPRC5B	51704	hgsc.bcm.edu	36	16	19790876	19790876	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATP2A1	487	hgsc.bcm.edu	36	16	28821141	28821141	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PRSS36	146547	hgsc.bcm.edu	36	16	31059442	31059443	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOD2	64127	hgsc.bcm.edu	36	16	49302900	49302900	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIFC3	3801	hgsc.bcm.edu	36	16	56363095	56363095	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCTD19	146212	hgsc.bcm.edu	36	16	65883159	65883159	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KCTD19	146212	hgsc.bcm.edu	36	16	65912230	65912231	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM65A	79567	hgsc.bcm.edu	36	16	66130104	66130104	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TAF1C	9013	hgsc.bcm.edu	36	16	82771152	82771152	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KLHL36	79786	hgsc.bcm.edu	36	16	83248943	83248943	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZC3H18	124245	hgsc.bcm.edu	36	16	87218642	87218642	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GSG2	83903	hgsc.bcm.edu	36	17	3575047	3575047	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANKFY1	51479	hgsc.bcm.edu	36	17	4032274	4032274	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PELP1	27043	hgsc.bcm.edu	36	17	4522642	4522643	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TXNDC17	84817	hgsc.bcm.edu	36	17	6486319	6486320	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EFNB3	1949	hgsc.bcm.edu	36	17	7552131	7552131	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ARHGEF15	22899	hgsc.bcm.edu	36	17	8162862	8162863	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
GAS7	8522	hgsc.bcm.edu	36	17	9803348	9803348	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FLCN	201163	hgsc.bcm.edu	36	17	17060434	17060434	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ULK2	9706	hgsc.bcm.edu	36	17	19670044	19670045	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SPECC1	92521	hgsc.bcm.edu	36	17	20048855	20048855	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NOS2	339345	hgsc.bcm.edu	36	17	23108447	23108449	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FOXN1	8456	hgsc.bcm.edu	36	17	23885959	23885959	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC55	84081	hgsc.bcm.edu	36	17	25529293	25529293	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CPD	9455	hgsc.bcm.edu	36	17	25773907	25773908	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLFN12	55106	hgsc.bcm.edu	36	17	30773606	30773606	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDK12	0	hgsc.bcm.edu	36	17	34881214	34881214	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IFI35	3430	hgsc.bcm.edu	36	17	38418613	38418613	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATXN7L3	56970	hgsc.bcm.edu	36	17	39628929	39628930	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CCDC43	124808	hgsc.bcm.edu	36	17	40111779	40111779	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PHOSPHO1	162466	hgsc.bcm.edu	36	17	44656912	44656913	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
XYLT2	64132	hgsc.bcm.edu	36	17	45788966	45788966	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RNF43	54894	hgsc.bcm.edu	36	17	53790160	53790160	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RPS6KB1	6198	hgsc.bcm.edu	36	17	55325465	55325465	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
INTS2	57508	hgsc.bcm.edu	36	17	57353942	57353942	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC16A6	9120	hgsc.bcm.edu	36	17	63781745	63781745	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
KIAA0195	9772	hgsc.bcm.edu	36	17	71002658	71002658	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BAHCC1	57597	hgsc.bcm.edu	36	17	77026433	77026433	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CSNK1D	1453	hgsc.bcm.edu	36	17	77800165	77800165	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ANKRD12	23253	hgsc.bcm.edu	36	18	9246207	9246207	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ROCK1	6093	hgsc.bcm.edu	36	18	16883102	16883103	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TRAPPC8	0	hgsc.bcm.edu	36	18	27707415	27707416	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SETBP1	26040	hgsc.bcm.edu	36	18	40787043	40787043	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALPK2	115701	hgsc.bcm.edu	36	18	54397423	54397423	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALPK2	115701	hgsc.bcm.edu	36	18	54397920	54397921	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SERPINB10	5273	hgsc.bcm.edu	36	18	59735719	59735719	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SAFB2	9667	hgsc.bcm.edu	36	19	5538282	5538282	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
C19orf45	374877	hgsc.bcm.edu	36	19	7476262	7476262	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ELAVL3	1995	hgsc.bcm.edu	36	19	11438604	11438605	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF791	163049	hgsc.bcm.edu	36	19	12600502	12600502	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
OCEL1	79629	hgsc.bcm.edu	36	19	17198840	17198840	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SUGP2	0	hgsc.bcm.edu	36	19	18997393	18997394	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF506	440515	hgsc.bcm.edu	36	19	19767351	19767351	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF486	90649	hgsc.bcm.edu	36	19	20169119	20169120	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF43	7594	hgsc.bcm.edu	36	19	21784163	21784163	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LSR	51599	hgsc.bcm.edu	36	19	40444702	40444702	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF567	163081	hgsc.bcm.edu	36	19	41902190	41902190	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF540	163255	hgsc.bcm.edu	36	19	42794460	42794460	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RASGRP4	115727	hgsc.bcm.edu	36	19	43595420	43595420	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MEGF8	1954	hgsc.bcm.edu	36	19	47530138	47530138	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ERCC2	2068	hgsc.bcm.edu	36	19	50553971	50553972	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
EML2	24139	hgsc.bcm.edu	36	19	50821834	50821834	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TEAD2	8463	hgsc.bcm.edu	36	19	54543900	54543900	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TSKS	60385	hgsc.bcm.edu	36	19	54934900	54934900	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNF701	55762	hgsc.bcm.edu	36	19	57777814	57777814	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BRSK1	84446	hgsc.bcm.edu	36	19	60506847	60506848	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IL11	3589	hgsc.bcm.edu	36	19	60569278	60569278	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RASSF2	9770	hgsc.bcm.edu	36	20	4724509	4724509	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DSTN	11034	hgsc.bcm.edu	36	20	17529680	17529680	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NKX2-2	4821	hgsc.bcm.edu	36	20	21441012	21441013	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PYGB	5834	hgsc.bcm.edu	36	20	25221102	25221102	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
TOP1	7150	hgsc.bcm.edu	36	20	39180311	39180311	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ZNFX1	57169	hgsc.bcm.edu	36	20	47320097	47320098	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CASS4	57091	hgsc.bcm.edu	36	20	54466991	54466992	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBM38	55544	hgsc.bcm.edu	36	20	55400099	55400100	+	Frame_Shift_Ins	INS	-	-	C	rs11481309	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CDH26	60437	hgsc.bcm.edu	36	20	58021179	58021180	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL20A1	57642	hgsc.bcm.edu	36	20	61413721	61413722	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
LTN1	0	hgsc.bcm.edu	36	21	29253663	29253663	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SFRS15	57466	hgsc.bcm.edu	36	21	31996526	31996526	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DOPEY2	9980	hgsc.bcm.edu	36	21	36539598	36539598	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ERG	2078	hgsc.bcm.edu	36	21	38677297	38677297	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BRWD1	54014	hgsc.bcm.edu	36	21	39504706	39504707	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL18A1	80781	hgsc.bcm.edu	36	21	45724428	45724429	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	GA	GA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
COL6A1	1291	hgsc.bcm.edu	36	21	46243499	46243501	+	In_Frame_Del	DEL	ACG	ACG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	ACG	ACG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
CECR1	51816	hgsc.bcm.edu	36	22	16070423	16070424	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MICAL3	57553	hgsc.bcm.edu	36	22	16680932	16680932	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MYO18B	84700	hgsc.bcm.edu	36	22	24494898	24494898	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NEFH	4744	hgsc.bcm.edu	36	22	28215581	28215604	+	In_Frame_Del	DEL	AGGCCAAGTCCCCAGAGAAGGAAG	AGGCCAAGTCCCCAGAGAAGGAAG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AGGCCAAGTCCCCAGAGAAGGAAG	AGGCCAAGTCCCCAGAGAAGGAAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
HMGXB4	10042	hgsc.bcm.edu	36	22	33991042	33991042	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ACO2	50	hgsc.bcm.edu	36	22	40249790	40249792	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	AAG	AAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ALG12	79087	hgsc.bcm.edu	36	22	48683995	48683995	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
RBBP7	5931	hgsc.bcm.edu	36	X	16773922	16773922	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
DCAF8L1	0	hgsc.bcm.edu	36	X	27908602	27908602	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
UBQLN2	29978	hgsc.bcm.edu	36	X	56608599	56608599	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FOXO4	4303	hgsc.bcm.edu	36	X	70238001	70238002	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FGF16	8823	hgsc.bcm.edu	36	X	76598600	76598601	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
ATRX	546	hgsc.bcm.edu	36	X	76824885	76824886	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
FAM46D	169966	hgsc.bcm.edu	36	X	79585802	79585802	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
NRK	203447	hgsc.bcm.edu	36	X	105037219	105037220	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IRS4	8471	hgsc.bcm.edu	36	X	107864459	107864459	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SLC6A14	11254	hgsc.bcm.edu	36	X	115498284	115498284	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
SASH3	54440	hgsc.bcm.edu	36	X	128754041	128754042	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
BCORL1	63035	hgsc.bcm.edu	36	X	129017692	129017692	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
IGSF1	3547	hgsc.bcm.edu	36	X	130244757	130244757	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
MAGEC3	139081	hgsc.bcm.edu	36	X	140794865	140794865	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PDZD4	57595	hgsc.bcm.edu	36	X	152723281	152723281	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
PLXNA3	55558	hgsc.bcm.edu	36	X	153341759	153341759	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5861-01A-01D-1650-10	TCGA-CM-5861-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3124dd19-3867-4ec8-92bc-75985c214036	41c38d58-1391-45b5-a754-4231808755f2
